Psyllid ID: psy11590

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-----
Protein Sequence
MQDYHCEFHFDVESCAVSRLQDITFPCEECKELCVLSKYCIKHKDCSKAMSTPAPSSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTSPLSVKFAMPHTRFDGGQVSSESRT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccEEccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEcccccHHEHHHHcccccccccccccccEccccccHEccccHccccEEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccEcccccccccEEcccccHHEHEHHcccccccccccccccEEccccEEcccccccEccccccEEccccHHHEHHHHcccccccccccccHHHEHEEEcccccccccccccccEEccccHHHHHHHHccccccccccccccEccccHHHHHHHHHHHHccccccccccEEccccccccccccccEEccccHHHEHEHEcccccccccEEEccHccccccccEccccccccccccHHHHHHHHHHHHHcccccccccccccHHccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccccEEcccccHHEHEEEccccEEEccccccEEEcccccEEEEEEEEEcccccccccccccEEccccHHHHHHHHcccccccccccccccEccccHHHEHEcccccccccccccccEccccHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
mqdyhcefhfDVESCAVsrlqditfpceecKELCVlskycikhkdcskamstpapssesvctehsnlfpkchscqkceeSFDNCNNLWSHMFikhensdfvcnlcppdskiMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTmnnitqykcpdcpaiLQTFKNLKchldihsgekdfschinsnlsEHIRMHHTEEKKYICEVCgtsfltwsslnshkyshddrkfscshcgnsyknpiflkrhfreshlkhsksnpeQYAVKSLQDIMYWCNvcsqrcylsatcsihrpsnckdqyKMSVSISNEcdqhmechtcnecdskhndcqSLWDHVFSEHKnmlafskpddsenkiSKVAEKQYWKDVEEKCRIIVEDtmryqcphcpsllKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHttthsnvkfkcDFCEKVYSHRNRLRYHISTVHenkwksaacdicgrvfldsknmkkhaavhsterpfvcKLCGIAYKWRKNLVRHQknckasakcslmttsplsvkfamphtrfdggqvssesrt
Flexible Loop (DISEMBL)
MQDYHCEFHFDVESCAVSRLQDITFPCEECKELCVLSKYCIKHKDCSKAMSTPAPSSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHlkhsksnpEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLafskpddsenkISKVaekqywkdVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHIStvhenkwksaACDICGRVFLDSKNMKKHaavhsterpfvcKLCGIAYKWRKNLVRHQKnckasakcslMTTSPlsvkfamphtrfdggqvssesrt
Low Complexity Region (SEG)
MQDYHCEFHFDVESCAVSRLQDITFPCEECKELCVLSKYCIKHKDCSKAMSTPAPSSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTSPLSVKFAMPHTRFDGGQVSSESRT
Disordered region (IsUnstruct)
***YHCEFHFDVESCAVSRLQDITFPCEECKELCVLSKYCIKHKDC*****************HSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFR*************YAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNML**************VAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTS*LSV********************
Disordered Region (DISOPRED)
MQDYHCEFHFDVESCAVSRLQDITFPCEECKELCVLSKYCIKHKDCSKAMSTPAPSSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTSPLSVKFAMPHTRFDGGQVSSES**
Disordered Region (DISEMBL)
MQDYHCEFHFDVESCAVSRLQDITFPCEECKELCVLSKYCIKHK********************SNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRES********PEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTSPLSVKFAMPHTRF***********
Disordered Region (DISPRO)
*QDYHCEFHFDVESCAVSRLQDITFPCEECKELCVLSKYCIKHKDCSKAMSTPAPSSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTSPLSVKFAMPHTRFDGGQVSSES**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQDYHCEFHFDVESCAVSRLQDITFPCEECKELCVLSKYCIKHKDCSKAMSTPAPSSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTSPLSVKFAMPHTRFDGGQVSSESRT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	555	2.2.26 [Sep-21-2011]
Q05481	1191	Zinc finger protein 91 OS	yes	N/A	0.803	0.374	0.254	5e-33
Q6ZNA1	936	Zinc finger protein 836 O	no	N/A	0.758	0.449	0.262	5e-32
P17038	809	Zinc finger protein 43 OS	no	N/A	0.729	0.500	0.263	1e-30
A8MTY0	619	Putative zinc finger prot	no	N/A	0.628	0.563	0.3	1e-30
O43345	1167	Zinc finger protein 208 O	no	N/A	0.859	0.408	0.278	2e-30
Q61116	645	Zinc finger protein 235 O	no	N/A	0.576	0.496	0.290	4e-30
Q14590	738	Zinc finger protein 235 O	no	N/A	0.607	0.456	0.290	6e-30
Q6ZN57	461	Zinc finger protein 2 hom	no	N/A	0.673	0.811	0.250	7e-30
Q5R8X1	613	Zinc finger protein 665 O	no	N/A	0.729	0.660	0.261	8e-30
Q96SE7	839	Zinc finger protein 347 O	no	N/A	0.780	0.516	0.258	9e-30

>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2

 Score =  143 bits (360), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 225/550 (40%), Gaps = 104/550 (18%)

Query: 22   DITFPCEECKELCVLSKYCIKHK------------DCSKAMSTPAPSSESVCTEHSNL-- 67
            + ++ CEEC +  + S    +HK            +C KA S       S   +H  +  
Sbjct: 599  EKSYKCEECGKAFLWSSTLRRHKRIHTGEKPYKCEECGKAFS-----HSSALAKHKRIHT 653

Query: 68   FPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCH 127
              K + C++C ++F N + L +H     E   + C  C                      
Sbjct: 654  GEKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECD--------------------- 692

Query: 128  TMQVHIPAVYKNFRSVTSFTMNNITQ-----YKCPDCPAILQTFKNLKCHLDIHSGEKDF 182
                      K F+ +++ T + I       YKC +C        NL  H  IH+GEK +
Sbjct: 693  ----------KTFKRLSTLTKHKIIHAGEKLYKCEECGKAFNRSSNLTIHKFIHTGEKPY 742

Query: 183  SC-------HINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCS 234
             C       + +S+L++H R+H T EK + C+ CG +F+  S+L  HK  H   K + C 
Sbjct: 743  KCEECGKAFNWSSSLTKHKRIH-TREKPFKCKECGKAFIWSSTLTRHKRIHTGEKPYKCE 801

Query: 235  HCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHR 294
             CG ++     L +H       H+   P  Y  K         +  ++   + A   +++
Sbjct: 802  ECGKAFSRSSTLTKH----KTIHTGEKP--YKCKECGKAFKHSSALAKHKIIHAGEKLYK 855

Query: 295  PSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQS--LWDHVFSEHKNM------- 345
               C   +  S +++     H   HT  E  SK  +C    +W    +EHK +       
Sbjct: 856  CEECGKAFNQSSNLTT----HKIIHT-KEKPSKSEECDKAFIWSSTLTEHKRIHTREKTY 910

Query: 346  ------LAFSKPDD-SENKISKVAEKQY-----WKDVEEKC-----RIIVEDTMRYQCPH 388
                   AFS+P   + +K     EK Y      K   +       +II      Y+C  
Sbjct: 911  KCEECGKAFSQPSHLTTHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKPYKCEE 970

Query: 389  CPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKV 447
            C    +   TL EH  IHT EK Y CE CG  F   S+L  HT  H+  K +KC+ C K 
Sbjct: 971  CGKAFRKSSTLTEHKIIHTGEKPYKCEECGKAFSQSSTLTRHTRMHTGEKPYKCEECGKA 1030

Query: 448  YSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYK 507
            ++  ++L  H   +H  + K   C+ CG+ F+ S  +  H  +H+ E+P+ C+ CG A+ 
Sbjct: 1031 FNRSSKLTTH-KIIHTGE-KPYKCEECGKAFISSSTLNGHKRIHTREKPYKCEECGKAFS 1088

Query: 508  WRKNLVRHQK 517
                L RH++
Sbjct: 1089 QSSTLTRHKR 1098

Homo sapiens (taxid: 9606)

>sp|Q6ZNA1|ZN836_HUMAN Zinc finger protein 836 OS=Homo sapiens GN=ZNF836 PE=2 SV=2

 Score =  139 bits (350), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 202/491 (41%), Gaps = 70/491 (14%)

Query: 44  KDCSKAMSTPAPSSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCN 103
           K C KA      SS  +  +  +   K + C +C ++F   + L  H  +      + C 
Sbjct: 221 KGCGKAFRV---SSSLINHQMVHTTEKPYKCNECGKAFHRGSLLTIHQIVHTRGKPYQCG 277

Query: 104 LCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQ-----YKCPD 158
           +C    KI  + + L+                  K+F    +  ++         YKC +
Sbjct: 278 VC---GKIFRQNSDLVNHRRSHTGEKPYKCNECGKSFSQSYNLAIHQRIHTGEKPYKCNE 334

Query: 159 CPAILQTFKNLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEVCGT 211
           C    +    L  H  IH+GEK + C I       NSNL  H R+H T EK Y C +CG 
Sbjct: 335 CGKTFKQGSCLTTHQIIHTGEKPYQCDICGKVFRQNSNLVNHQRIH-TGEKPYKCNICGK 393

Query: 212 SFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSL 270
           SF   S+L +H+  H   K + C  CG ++K    L  H     + H+   P        
Sbjct: 394 SFSQSSNLATHQTVHSGNKPYKCDECGKTFKRSSSLTTH----QIIHTGEKP-------- 441

Query: 271 QDIMYWCNVCSQRCYLSATCSIHRPSNCKDQ-YKMSVSISNECDQHMECHTCNECDSKHN 329
               Y C+VC +     +  + H+ S+  ++ YK                 CNEC     
Sbjct: 442 ----YTCDVCDKVFSQRSQLARHQRSHTGEKPYK-----------------CNECGK--- 477

Query: 330 DCQSLWDHVFSEHKNMLAFSKPDDSEN--KISKVAEKQYWKDVEEKCRIIVEDTMRYQCP 387
                   VFS+  +++   +    E   K  K  +      +  + +II     RYQC 
Sbjct: 478 --------VFSQTSHLVGHRRIHTGEKPYKCDKCGKAFKQGSLLTRHKIIHTREKRYQCG 529

Query: 388 HCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEK 446
            C  +      L  H  IHT E+ Y C +CG  F +  +L  H   H+  K F+C+ C  
Sbjct: 530 ECGKVFSENSCLVRHLRIHTGEQPYKCNVCGKVFNYSGNLSIHKRIHTGEKPFQCNECGT 589

Query: 447 VYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAY 506
           V+ + + L  H+  +H  + K   C++CG+VF DS N+  H  +H+ E+PF C  CG  +
Sbjct: 590 VFRNYSCLARHLR-IHTGQ-KPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVF 647

Query: 507 KWRKNLVRHQK 517
            +   L RH+K
Sbjct: 648 SYYSCLARHRK 658

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P17038|ZNF43_HUMAN Zinc finger protein 43 OS=Homo sapiens GN=ZNF43 PE=2 SV=4

 Score =  134 bits (338), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 202/527 (38%), Gaps = 122/527 (23%)

Query: 25  FPCEECKELCVLSKYCIKHK------------DCSKAMSTPAPSSESVCTEHSNL--FPK 70
           + CEEC ++   S     HK            +C KA +       S+ T H  +    K
Sbjct: 230 YTCEECGKVFNWSSRLTTHKKNYTRYKLYKCEECGKAFN-----KSSILTTHKIIRTGEK 284

Query: 71  CHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQ 130
            + C++C ++F+  +NL  H  I      + C  C         +   L +H K+ HT +
Sbjct: 285 FYKCKECAKAFNQSSNLTEHKKIHPGEKPYKCEECGK----AFNWPSTLTKH-KRIHTGE 339

Query: 131 VHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSC------ 184
                                  Y C +C      F NL  H  IH+ EK + C      
Sbjct: 340 ---------------------KPYTCEECGKAFNQFSNLTTHKRIHTAEKFYKCTECGEA 378

Query: 185 -HINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKN 242
              +SNL++H ++H TE+K Y CE CG +F   S L  HK +H   K + C  CG ++  
Sbjct: 379 FSRSSNLTKHKKIH-TEKKPYKCEECGKAFKWSSKLTEHKLTHTGEKPYKCEECGKAFNW 437

Query: 243 PIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCS----QRCYLSATCSIH---RP 295
           P  L +H R     H+   P            Y C VC     Q   L+    IH   +P
Sbjct: 438 PSTLTKHNR----IHTGEKP------------YKCEVCGKAFNQFSNLTTHKRIHTAEKP 481

Query: 296 SNCKDQYKMSVSISN-----ECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSK 350
             C++  K     SN     +     + + C EC          W    +EHK      K
Sbjct: 482 YKCEECGKAFSRSSNLTKHKKIHIEKKPYKCEECGKAFK-----WSSKLTEHKITHTGEK 536

Query: 351 PDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEK 410
           P                                Y+C  C      F  L +H  IHT EK
Sbjct: 537 P--------------------------------YKCEECGKAFNHFSILTKHKRIHTGEK 564

Query: 411 KYVCELCGAYFIHKSSLVAHTTTHSNVKF-KCDFCEKVYSHRNRLRYHISTVHENKWKSA 469
            Y CE CG  F   S+L  H   H+  KF KC+ C K ++  + L  H   +H    K  
Sbjct: 565 PYKCEECGKAFTQSSNLTTHKKIHTGEKFYKCEECGKAFTQSSNLTTH-KKIHTG-GKPY 622

Query: 470 ACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQ 516
            C+ CG+ F     + KH  +H+ E+P+ C+ CG A+KW   L +H+
Sbjct: 623 KCEECGKAFNQFSTLTKHKIIHTEEKPYKCEECGKAFKWSSTLTKHK 669

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A8MTY0|ZN724_HUMAN Putative zinc finger protein 724 OS=Homo sapiens GN=ZNF724P PE=5 SV=3

 Score =  134 bits (338), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 174/410 (42%), Gaps = 61/410 (14%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDF---SCHINSNLSEHIRMH---HTEEKKYICE 207
           YKC +C        +L  H  IH+GEK +    C    N+S H+  H   HT E  Y C+
Sbjct: 226 YKCEECGIAFNKSSHLNTHKIIHTGEKSYKREECGKAFNISSHLTTHKIIHTGENAYKCK 285

Query: 208 VCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYA 266
            CG +F   S+L  HK  H   K + C HCG ++     L +H R     H+   P    
Sbjct: 286 ECGKAFNQSSTLTRHKIIHAGEKPYICEHCGRAFNQSSNLTKHKR----IHTGDKP---- 337

Query: 267 VKSLQDIMYWCNVCSQRCYLSATCSIHR-------PSNCKDQYKMSVSISNECDQHMECH 319
                   Y C  C +   +S+T + H+       P  C++  K + ++S+   QH   H
Sbjct: 338 --------YKCEECGKAFNVSSTLTQHKRIHTGEKPYKCEECGK-AFNVSSTLTQHKRIH 388

Query: 320 T------CNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEK 373
           T      C EC    N    L     + HK +    KP   E      A  Q+ +    K
Sbjct: 389 TGEKPYKCEECGKAFNTSSHL-----TTHKRIHTGEKPYKCEE--CGKAFNQFSQLTTHK 441

Query: 374 CRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTT 433
             II      Y+C  C    K    L EH  IHT EK Y CE CG  F   S L  H   
Sbjct: 442 --IIHTGEKPYKCKECGKAFKRSSNLTEHRIIHTGEKPYKCEECGKAFNLSSHLTTHKKI 499

Query: 434 HSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHS 492
           H+  K +KC  C K ++  + L  H   +H  + K   C+ CG+ F    N+ +H  +H+
Sbjct: 500 HTGEKPYKCKECGKAFNQSSTLARH-KIIHAGE-KPYKCEECGKAFYQYSNLTQHKIIHT 557

Query: 493 TERPFVCKLCGIAYKWRKNLVRHQ-----------KNC-KASAKCSLMTT 530
            E+P+ C+ CG A+ W   L +H+           K C KA  +CS +TT
Sbjct: 558 GEKPYKCEECGKAFNWSSTLTKHKVIHTGEKPYKCKECGKAFNQCSNLTT 607

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|O43345|ZN208_HUMAN Zinc finger protein 208 OS=Homo sapiens GN=ZNF208 PE=2 SV=1

 Score =  134 bits (336), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 229/557 (41%), Gaps = 80/557 (14%)

Query: 17  VSRLQDITFPCEECKEL----CVLSKYCIKH--------KDCSKAMSTPAPSSESVCTEH 64
           V    + ++ CEEC +      +L+K+ I H        ++C KA S       S  T H
Sbjct: 249 VIHTGEKSYKCEECGKAFNQSAILTKHKIIHTGEKPNKCEECGKAFSKV-----STLTTH 303

Query: 65  SNLFP--KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRH 122
             +    K + C++C ++F   + L +H  I      + C  C    K   K++ +L +H
Sbjct: 304 KAIHAGEKPYKCKECGKAFSKVSTLITHKAIHAGEKPYKCKEC---GKAFSKFS-ILTKH 359

Query: 123 MKQCHTMQV-----HIPAVYKNFRSVTSF---TMNNITQYKCPDCPAILQTFKNLKCHLD 174
            K  HT +           YK + S  S+          YKC +C      F  L  H  
Sbjct: 360 -KVIHTGEKPYKCEECGKAYK-WPSTLSYHKKIHTGEKPYKCEECGKGFSMFSILTKHEV 417

Query: 175 IHSGEKDFSC-------HINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHD 227
           IH+GEK + C       + +SNL EH ++ HT E  Y CE CG  F   S+L+ HK  H 
Sbjct: 418 IHTGEKPYKCEECGKAFNWSSNLMEHKKI-HTGETPYKCEECGKGFSWSSTLSYHKKIHT 476

Query: 228 -DRKFSCSHCGNSYKNPIFLKRHFR----ESHLKHSKSNPEQYAVKSL--------QDIM 274
            ++ + C  CG ++     L +H R    E   K  +       V +L         +  
Sbjct: 477 VEKPYKCEECGKAFNQSAILIKHKRIHTGEKPYKCEECGKTFSKVSTLTTHKAIHAGEKP 536

Query: 275 YWCNVCSQRCYLSATCSIH-------RPSNCKDQYKMSVSISNECDQHMECHT------C 321
           Y C  C +     +T + H       +P  CK+  K + S  +   +H   HT      C
Sbjct: 537 YKCKECGKTFIKVSTLTTHKAIHAGEKPYKCKECGK-AFSKFSILTKHKVIHTGEKPYKC 595

Query: 322 NECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDT 381
            EC    N     W     EHK +    KP   E       +      V  K ++I    
Sbjct: 596 EECGKAFN-----WSSNLMEHKRIHTGEKPYKCEE----CGKSFSTFSVLTKHKVIHTGE 646

Query: 382 MRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FK 440
             Y+C  C    K   TL  H  IHT EK Y CE CG  F   + L+ H   H++ K +K
Sbjct: 647 KPYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKAFNRSAILIKHKRIHTDEKPYK 706

Query: 441 CDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK 500
           C+ C K +S  + L  H   +H  + K   C  CG+ F     + KH  +H+ E+P+ C+
Sbjct: 707 CEECGKTFSKVSTLTTH-KAIHAGE-KPYKCKECGKAFSKFSILTKHKVIHTGEKPYKCE 764

Query: 501 LCGIAYKWRKNLVRHQK 517
            CG AYKW   L  H+K
Sbjct: 765 ECGKAYKWPSTLSYHKK 781

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q61116|ZN235_MOUSE Zinc finger protein 235 OS=Mus musculus GN=Znf235 PE=2 SV=1

 Score =  133 bits (334), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 160/375 (42%), Gaps = 55/375 (14%)

Query: 153 QYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYI 205
           +Y C +C    +    L+ H  +H+GEK + C         +S+L+ H R+H T EK Y 
Sbjct: 284 RYWCHECGKGFRQSSALQTHQRVHTGEKPYRCDSCGKGFSRSSDLNIHRRVH-TGEKPYK 342

Query: 206 CEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQ 264
           CEVCG  F  W+ L +H+  H   K + C  CG  +     L  H R     H++  P  
Sbjct: 343 CEVCGKGFTQWAHLQAHERIHTGEKPYKCGDCGKRFSCSSNLHTHQR----VHTEEKP-- 396

Query: 265 YAVKSLQDIMYWCNVCSQRCYLSATCSIH-RPSNCKDQYKMSVSISNECDQHMECHTCNE 323
                     Y CN C +R  LS    IH R    +  YK                 C E
Sbjct: 397 ----------YECNECGKRFSLSGNLDIHQRVHTGEKPYK-----------------CEE 429

Query: 324 CDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMR 383
           C    +   S     F  H+ +    KP          +   ++ D +     I      
Sbjct: 430 CGKGFSSASS-----FQSHQRVHTGEKPFHCSVCGKNFSRSSHFLDHQR----IHTGEKP 480

Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCD 442
           Y+C  C        +L  H ++HT +K Y C  CG  F H SSL AH + H+  K FKC+
Sbjct: 481 YRCEVCGKRFPWSLSLHSHQSVHTGKKPYKCGECGKGFSHASSLQAHHSVHTGEKPFKCN 540

Query: 443 FCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC 502
            C+K +S  + L+ H   VH  + K   CD CG+ F    +++ H  +H+ E+PF C+ C
Sbjct: 541 VCQKQFSKTSNLQAH-QRVHTGE-KPYKCDTCGKAFSQKSSLQVHQRIHTGEKPFKCEEC 598

Query: 503 GIAYKWRKNLVRHQK 517
           G  ++W   L  HQ+
Sbjct: 599 GKEFRWSVGLSSHQR 613

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q14590|ZN235_HUMAN Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 PE=2 SV=3

 Score =  132 bits (333), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 160/386 (41%), Gaps = 49/386 (12%)

Query: 153 QYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCH---INSNLSEHIRMH---HTEEKKYIC 206
           +Y C +C        NL+ H  +H+GEK ++CH    + N S H+  H   HT EK Y C
Sbjct: 318 RYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGKSFNQSSHLYAHLPIHTGEKPYRC 377

Query: 207 EVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQY 265
           + CG  F   + LN H   H   K + C  CG  +     L+ H R     H+   P   
Sbjct: 378 DSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHER----IHTGEKP--- 430

Query: 266 AVKSLQDIMYWCNVCSQRCYLSATCSIH-------RPSNCKDQYKMSVSISNECDQHMEC 318
                    Y C  C +R   S+    H       +P  C D+     S+S     H   
Sbjct: 431 ---------YKCGDCGKRFSCSSNLHTHQRVHTEEKPYKC-DECGKCFSLSFNLHSHQRV 480

Query: 319 HT------CNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEE 372
           HT      C EC    +   S     F  H+ +    KP          ++  Y++  + 
Sbjct: 481 HTGEKPYKCEECGKGFSSASS-----FQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQR 535

Query: 373 KCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTT 432
               +      Y+C  C         L  H  +HT EK Y CE CG  F   S+L AH +
Sbjct: 536 ----VHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQS 591

Query: 433 THSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVH 491
            H+  K FKCD C+K +S  + L+ H   VH  + K   CD CG+ F    N++ H  +H
Sbjct: 592 VHTGEKPFKCDACQKRFSQASHLQAH-QRVHTGE-KPYKCDTCGKAFSQRSNLQVHQIIH 649

Query: 492 STERPFVCKLCGIAYKWRKNLVRHQK 517
           + E+PF C+ CG  + W   L  HQ+
Sbjct: 650 TGEKPFKCEECGKEFSWSAGLSAHQR 675

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZN57|ZFP2_HUMAN Zinc finger protein 2 homolog OS=Homo sapiens GN=ZFP2 PE=2 SV=1

 Score =  132 bits (332), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 195/483 (40%), Gaps = 109/483 (22%)

Query: 45  DCSKAMSTPAPSSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNL 104
           +C+        +SE + T+   +  K + C +C ++F   ++L  H  I      + CN+
Sbjct: 75  NCNSHGEDATQNSELIKTQRMFVGKKIYECNQCSKTFSQSSSLLKHQRIHTGEKPYKCNV 134

Query: 105 CPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQ 164
           C    K  I+ + L V   ++ HT +                       YKC +C     
Sbjct: 135 C---GKHFIERSSLTVH--QRIHTGE---------------------KPYKCNECGKAFS 168

Query: 165 TFKNLKCHLDIHSGEKDFSC-------HINSNLSEHIRMHHTEEKKYICEVCGTSFLTWS 217
              NL  H   H+GEK + C       H NS+L +H R+H T EK Y C  CG +F    
Sbjct: 169 QSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHERIH-TGEKPYKCNECGKAFTQSM 227

Query: 218 SLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYW 276
           +L  H+ +H   K + C+ CG ++   + L  H R     H+   P            Y 
Sbjct: 228 NLTVHQRTHTGEKPYECNECGKAFSQSMHLIVHQR----SHTGEKP------------YE 271

Query: 277 CNVCSQRCYLSATCSIHRPSNCKDQ-YKMSVSISNECDQHMECHTCNECDSKHNDCQSLW 335
           C+ C +    S+T ++H+ ++  ++ YK                 CN+C    +    L 
Sbjct: 272 CSQCGKAFSKSSTLTLHQRNHTGEKPYK-----------------CNKCGKSFSQSTYLI 314

Query: 336 DHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKT 395
                EH+ + +  KP                                ++C  C      
Sbjct: 315 -----EHQRLHSGVKP--------------------------------FECNECGKAFSK 337

Query: 396 FWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRL 454
             +L +H  IHT EK Y C +CG +F  +SSL  H   H+  K ++C+ C K +S    L
Sbjct: 338 NSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVHQVIHTGEKPYECNECGKAFSQSAYL 397

Query: 455 RYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVR 514
             H   +H  + K   CD CG+ F+ + ++  H   H+ E+P+ C  CG A+    NL R
Sbjct: 398 IEH-QRIHTGE-KPYECDQCGKAFIKNSSLTVHQRTHTGEKPYQCNECGKAFSRSTNLTR 455

Query: 515 HQK 517
           HQ+
Sbjct: 456 HQR 458

Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance.

Homo sapiens (taxid: 9606)

>sp|Q5R8X1|ZN665_PONAB Zinc finger protein 665 OS=Pongo abelii GN=ZNF665 PE=2 SV=1

 Score =  132 bits (331), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 204/482 (42%), Gaps = 77/482 (15%)

Query: 70  KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTM 129
           K + C +C ++F   +NL  H  I      + CN C    K+  + ++L     ++ HT 
Sbjct: 139 KPYRCNECGKAFTVRSNLTIHQVIHTGEKPYKCNEC---GKVFSQPSNLAGH--QRIHTG 193

Query: 130 QVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCH---- 185
           +                       YKC +C    +    L  H  IH+GEK + C+    
Sbjct: 194 E---------------------KPYKCNECGKAFRAHSKLTTHQVIHTGEKPYKCNECGK 232

Query: 186 ---INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYK 241
               NS+L+ H R+ HT EK Y C  CG +F   SSL +H+  H   K + C+ CG  ++
Sbjct: 233 CFTQNSHLASHRRI-HTGEKPYKCNECGKAFSVRSSLTTHQTIHTGEKPYKCNECGKVFR 291

Query: 242 NPIFLKRHFRESHLKHSK-------------SNPEQYAVKSLQDIMYWCNVC----SQRC 284
           +  +L +H R  H                  SN  ++ +    +  + CN C    +Q  
Sbjct: 292 HNSYLTKH-RRVHTGEKPYKCNECGKAFSMHSNLTKHQIIHTGEKPFKCNECVKVFTQYS 350

Query: 285 YLSATCSIH---RPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHV--F 339
           +L+    IH   +P  C D+   + S+ +    H   HT  E   K NDC  ++      
Sbjct: 351 HLANHRRIHTGEKPYRC-DECGKAFSVRSSLTTHQAIHT-GEKPYKCNDCGKVFTQNSHL 408

Query: 340 SEHKNMLAFSKP---DDSENKISKVAE-KQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKT 395
           + H+ + +  KP   D+     S+ ++  ++W+        +      Y+C  C      
Sbjct: 409 ASHRGIHSGEKPYKCDECGKAFSQTSQLARHWR--------VHTGEKPYKCNECGKAFSV 460

Query: 396 FWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYS-HRNR 453
             +L  H  IHT +K Y C  CG  F H S L  H   H+  K +KC+ C K +S H N 
Sbjct: 461 HSSLTTHQTIHTGQKPYKCNDCGKVFRHNSYLAVHQRIHTGEKPYKCNECGKAFSVHSNL 520

Query: 454 LRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLV 513
             + +    E  +K   C+ CG+VF  + ++  H  +H+ E+P+ C  CG A+  R  L 
Sbjct: 521 ATHQVIHTGEKPYK---CNECGKVFTQNSHLANHRRIHTGEKPYRCNECGKAFSVRSTLT 577

Query: 514 RH 515
            H
Sbjct: 578 TH 579

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q96SE7|ZN347_HUMAN Zinc finger protein 347 OS=Homo sapiens GN=ZNF347 PE=1 SV=2

 Score =  132 bits (331), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 212/533 (39%), Gaps = 100/533 (18%)

Query: 45  DCSKAMSTPAPSSESVCTEHSNL--FPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVC 102
           +C KA  T      S  T H  +    K + C +C + F   + L  H  I      + C
Sbjct: 293 ECGKAFRT-----RSNLTTHQVIHTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPYKC 347

Query: 103 NLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIP--AVYKNFRSVTSFTMNNITQ------- 153
           N C    K+  + +HL VRH +  HT +         K FR+ +S  ++  T        
Sbjct: 348 NEC---GKVFTQNSHL-VRH-RGIHTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPYK 402

Query: 154 --------------------------YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCH-- 185
                                     YKC +C        +L  HL IH+GEK + CH  
Sbjct: 403 CNECGKVFTQNSHLTNHWRIHTGEKPYKCNECGKAFGVRSSLAIHLVIHTGEKPYKCHEC 462

Query: 186 -----INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNS 239
                 NS+L+ H ++ HT EK Y C  CG +F   S+L +H+  H   K + C+ CG  
Sbjct: 463 GKVFRRNSHLARH-QLIHTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPYKCNECGKV 521

Query: 240 YKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIH------ 293
           +     L  H R     H+   P            Y CN C +   + ++ + H      
Sbjct: 522 FTQNSHLANHQR----IHTGVKP------------YMCNECGKAFSVYSSLTTHQVIHTG 565

Query: 294 -RPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDH--VFSEHKNMLAFSK 350
            +P  C +  K+  + ++   +H   HT  E   K N+C  ++ H    S H+ +    K
Sbjct: 566 EKPYKCNECGKV-FTQNSHLARHRGIHT-GEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 623

Query: 351 PDDSENKISKVAEKQYWKDVEEKCRIIVEDTMR-----YQCPHCPSLLKTFWTLKEHFNI 405
           P             +Y K   E   +     +      Y+C  C  +      L  H  +
Sbjct: 624 P---------YKYNEYGKAFSEHSNLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHRRV 674

Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHEN 464
           HT  K Y C  CG  F   S L  H   H+  K ++C+ C K +S R+ L  H   +H  
Sbjct: 675 HTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPYECNQCGKAFSVRSSLTTH-QAIHTG 733

Query: 465 KWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           K K   C+ CG+VF  + ++ +H  +H+ E+P+ C  CG A+     L RHQ+
Sbjct: 734 K-KPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCNECGKAFSQTSKLARHQR 785

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	555
326667108	521	PREDICTED: zinc finger protein 271-like	0.751	0.800	0.294	2e-33
334327668	1238	PREDICTED: zinc finger protein 729-like	0.706	0.316	0.271	2e-32
395750823	970	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.781	0.447	0.281	3e-32
326676531	711	PREDICTED: zinc finger protein 850 [Dani	0.742	0.579	0.274	4e-32
338710314	1023	PREDICTED: zinc finger protein 729 [Equu	0.744	0.403	0.287	6e-32
440905011	790	Zinc finger protein 26, partial [Bos gru	0.744	0.522	0.274	6e-32
392338646	730	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.774	0.589	0.273	1e-31
410053578	1235	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.812	0.365	0.256	2e-31
395750846	1279	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.857	0.372	0.281	2e-31
338727212	710	PREDICTED: zinc finger protein 26-like [	0.717	0.560	0.271	2e-31

>gi|326667108|ref|XP_003198488.1| PREDICTED: zinc finger protein 271-like [Danio rerio]

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 203/502 (40%), Gaps = 85/502 (16%)

Query: 70  KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTM 129
           K ++C++C +SF N  NL  HM I      + C  C    K   K  +L V        M
Sbjct: 3   KAYTCKQCGKSFYNTRNLTVHMRIHTGERPYTCQQC---GKSFHKTGNLTVH-------M 52

Query: 130 QVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSC----- 184
           ++H                     Y C  C    QT  NL  H+ IH+GEK +SC     
Sbjct: 53  RIH----------------TGERPYTCQQCGKSFQTTGNLTVHMRIHTGEKPYSCPQCGK 96

Query: 185 --HINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYK 241
             + NSNL  H+R+H T EK + C  CG SF   SSL  H   H   K F+C+HCG S+ 
Sbjct: 97  SYNQNSNLETHMRIH-TGEKPFTCTQCGKSFSKSSSLYRHMKIHTGEKPFTCTHCGKSFN 155

Query: 242 NPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMY------------WCNVCSQRCYLSAT 289
           +  FL  H R    +   + P+     S    +Y             C  C +    S++
Sbjct: 156 HSSFLNLHMRIHTGEKPLTCPQCGKSFSKSSSLYRHMKIHTGEKPFTCTQCGKSFSCSSS 215

Query: 290 CSIH-------RPSNCKDQYKMSVSISNECDQHMECHT------CNECDSKHNDCQSLWD 336
            + H       +P  C  Q   S S+S    QHM  HT      C +C    +   SL  
Sbjct: 216 LNKHMRIHTGEKPFTC-TQCGKSFSLSTSLHQHMRIHTGEKPFTCPQCGKIFSKSSSLNL 274

Query: 337 HVFSEHKNMLAFSKPDDSENKISKVAEKQYWK---DVEE-------KCRIIVEDTMR--- 383
           H+   H     F+ P   ++ I     K + K    V+E       K  I   +  R   
Sbjct: 275 HM-RIHTGEKPFTCPQCGKSFIHSSHLKNHMKIHTSVKEYVCLECEKTFITAAELKRHQR 333

Query: 384 -------YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSN 436
                  Y+C HC   L +   LK H  IHT EK + C  CG  F H S L  H   H+ 
Sbjct: 334 IHTGEKPYKCSHCSKSLASKSKLKNHMRIHTGEKPFTCTHCGKCFSHSSYLNLHMRIHTG 393

Query: 437 VK-FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTER 495
            K   C  C K YS    L  H+  +H  + K   C  CG+ F D+  +KKH  +H+ E+
Sbjct: 394 EKPLTCPQCGKSYSKSLSLYRHM-MIHTGE-KPFTCTHCGKSFCDASYLKKHMRIHTGEK 451

Query: 496 PFVCKLCGIAYKWRKNLVRHQK 517
           P+ C  CG ++     L  H K
Sbjct: 452 PYTCAQCGKSFSKSSGLYSHMK 473

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334327668|ref|XP_001375524.2| PREDICTED: zinc finger protein 729-like [Monodelphis domestica]

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 197/471 (41%), Gaps = 79/471 (16%)

Query: 70   KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTM 129
            K + C++C ++F   ++L +H  I      + C  C    K   +   L+V H       
Sbjct: 649  KPYECKQCGKAFTRSSSLATHQLIHTGEKPYECKQC---GKAFKQRVSLVVHH------- 698

Query: 130  QVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHI--- 186
            ++H                +    Y+C  C        +L  H  IH+GEK + C +   
Sbjct: 699  RIH----------------SGEKPYECKQCGKAFTERGSLTRHQRIHTGEKPYECKLCGK 742

Query: 187  ----NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYK 241
                +S L+ H R+H T EK Y C++CG +F+  S+L +H+  H   K + C  CG ++ 
Sbjct: 743  AFMQSSYLAIHQRIH-TGEKPYECKLCGKAFMQSSNLATHQKIHTGEKPYECKQCGKTFM 801

Query: 242  NPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIH-------R 294
                L  H R     H+   P            Y C  C +    S++ + H       R
Sbjct: 802  QSYNLATHQR----IHTGEKP------------YECKQCGKAFRRSSSLATHQLIHSGER 845

Query: 295  PSNCKDQYKMSVSISNECDQHMECHT------CNECDSKHNDCQSLWDHVFSEHKNMLAF 348
            P  CK   K +       ++H   HT      C +C         L   +  +H+ +   
Sbjct: 846  PYECKHCGK-AFRGRGSFNRHQRIHTGEKPFLCKQCGKAF-----LEKGILIKHQLIHTG 899

Query: 349  SKPDDSENKISKVAEKQY-WKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHT 407
             KP      + K   K + ++    K + I      Y+C HC        +L  H  IHT
Sbjct: 900  EKPF-----VCKQCGKAFTYRGSLAKHQKIHTGEKPYECKHCGKAFTQGGSLTRHQKIHT 954

Query: 408  SEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKW 466
             EK Y C+LCG  F+  S+L AH   HS  K ++C  C K +  R  L  H   +H  + 
Sbjct: 955  GEKPYECKLCGKAFMQSSNLTAHQKIHSGEKPYECKQCGKAFIERRSLAKH-QRIHTGE- 1012

Query: 467  KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
            K   C  CG+ F  S ++  H  +H+ E+PFVCK CG A+ +R +L RHQK
Sbjct: 1013 KPYECKQCGKAFTRSSSLATHQLIHTGEKPFVCKQCGKAFTYRGSLTRHQK 1063

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395750823|ref|XP_002829029.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 729 isoform 1 [Pongo abelii]

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 211/504 (41%), Gaps = 70/504 (13%)

Query: 44  KDCSKAMSTPAPSSESVCTEHSNL--FPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFV 101
           K+C KA +       S  T H  +    K + C+KC ++F   +NL +H  I      + 
Sbjct: 289 KECGKAFN-----RSSTLTTHRKIHTGEKPYKCEKCGKAFKQSSNLTTHKIIHTGEKPYK 343

Query: 102 CNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQ-----YKC 156
           C  C    K   + AHL    +              K F   +  T + I       YKC
Sbjct: 344 CKKC---GKAFNQSAHLTTHEIIHTGEKPYKCEKCGKAFNHFSHLTTHKIIHTGEKPYKC 400

Query: 157 PDCPAILQTFKNLKCHLDIHSGEKDFSC-------HINSNLSEHIRMHHTEEKKYICEVC 209
            +C    +    L  H  IH+GEK + C       + +S L+EH ++H T EK Y CE C
Sbjct: 401 KECGKAFKHSSTLTKHKIIHTGEKPYKCKECGKAFNQSSKLTEHKKIH-TGEKPYECEKC 459

Query: 210 GTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVK 268
           G +F   S+L  HK SH + K + C  CG  +K P  L  H     + H+   P      
Sbjct: 460 GKAFNQSSNLTRHKKSHTEEKPYKCEECGKGFKWPSTLTIH----KIIHTGEKP------ 509

Query: 269 SLQDIMYWCNVCSQRCYLSATCSIHR-------PSNCKDQYKMSVSISNECDQHMECHT- 320
                 Y C  C +    S+  + H+       P  C++  K + + S+   +H   HT 
Sbjct: 510 ------YKCEECGKAFNQSSKLTKHKKIHTGEKPYTCEECGK-AFNQSSNLTKHKRIHTG 562

Query: 321 -----CNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQY--WKDVEEK 373
                C ECD         W  V ++HK +    KP        K  +K +     + + 
Sbjct: 563 EKPYKCEECDKAFK-----WSSVLTKHKIIHTGKKPFKC-----KKCDKSFCMLLHLTQH 612

Query: 374 CRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTT 433
            RI V +   YQC  C  +   F TL  H  IHT EK Y CE CG  F   S+L  H   
Sbjct: 613 KRIHVRENS-YQCEECGKVFNWFSTLTRHRRIHTGEKPYKCEECGKAFKQSSTLTTHKII 671

Query: 434 HSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHS 492
           H+  K ++C+ C K ++  + L  H   +H  + K   C+ CGR F  S ++  H  +H+
Sbjct: 672 HTGEKPYRCEECGKTFNRSSHLTTH-KRIHTGE-KPYRCEECGRAFNRSSHLTTHKIIHT 729

Query: 493 TERPFVCKLCGIAYKWRKNLVRHQ 516
            E+P+ C+ CG A+     L  H+
Sbjct: 730 GEKPYKCEECGKAFNQSSTLTTHK 753

Source: Pongo abelii

Species: Pongo abelii

Genus: Pongo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326676531|ref|XP_003200602.1| PREDICTED: zinc finger protein 850 [Danio rerio]

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 198/473 (41%), Gaps = 61/473 (12%)

Query: 73  SCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPD-SKIMIKYAHLLVRHMKQCHTMQV 131
           +C  C + F    +L  HM I      + C  C     +  I   HL +   ++ ++   
Sbjct: 116 TCPDCGKKFRLKQSLEGHMRIHTGEKPYTCQNCGKSFREKQILDTHLTIHTGEKPYS--- 172

Query: 132 HIPAVYKNFRSVTSF-----TMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSC-- 184
             P   K+FR          T      Y C +C       +NL+ H+ IH+GEK +SC  
Sbjct: 173 -CPECGKSFRVKKCLENHIKTHTGEKPYTCQECGKSFAIKQNLERHMRIHTGEKPYSCPE 231

Query: 185 -----HINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGN 238
                 +  +L  H+R+H T EK + C+ CG SF     L SH   H   K F CSHCG 
Sbjct: 232 CGRSFRVKQDLKIHVRIH-TGEKPFSCQQCGKSFTENKKLESHMRIHTGEKPFVCSHCGK 290

Query: 239 SYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIH----- 293
           +++    L+ H R     H+ S P            Y C  C +      +  IH     
Sbjct: 291 NFRGKQNLESHMR----LHTGSKP------------YTCPQCGKSYNQQKSLDIHIRTHT 334

Query: 294 --RPSNCKDQYKMSVSISNECDQHMECHT------CNECDSKHNDCQSLWDHVFSEHKNM 345
             +P  C DQ   S +  +    H+  HT      C +C     +   L       HK +
Sbjct: 335 GEKPFAC-DQCGKSFTHQSNLKGHIRIHTGEKPFTCPQCGKSFIEKTKL-----ERHKKI 388

Query: 346 LAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNI 405
            +  KP D ++      EKQ    + +K   I      Y CP C    +    L+ H  I
Sbjct: 389 HSGEKPYDCQHCKKSFTEKQ----ILDKHLTIHTGEKPYSCPECGKSFRVKNCLENHIKI 444

Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHEN 464
           HT EK Y C+ CG  F  K +L  H   H+  K F C  C + +  +  L+ H+  +H  
Sbjct: 445 HTGEKPYTCQECGKSFTEKQNLERHIRIHTGEKPFACPECGRSFRVKQDLKIHLR-IHTG 503

Query: 465 KWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           + K  +C  CG+ F ++K ++ H  +H+ E+PFVC  CG  ++ ++NL  H +
Sbjct: 504 E-KPFSCQQCGKSFSENKKLENHMRIHTGEKPFVCSHCGKNFRGKQNLESHMR 555

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|338710314|ref|XP_001495235.3| PREDICTED: zinc finger protein 729 [Equus caballus]

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 219/497 (44%), Gaps = 84/497 (16%)

Query: 45  DCSKAMSTPAPSSESVCTEHSNL--FPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVC 102
           +C KA +     + S  T+H  +    K + C +C ++F+ C+NL  H  +      + C
Sbjct: 440 ECGKAFT-----AHSNLTQHKKIHTGEKPYKCSECGKAFNQCSNLTRHQRVHTGEKPYKC 494

Query: 103 NLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAI 162
           ++C    K+  + ++L     ++ HT +                       YKC +C  +
Sbjct: 495 DVC---GKVCSQNSNLASH--QRMHTGE---------------------KLYKCNECGKV 528

Query: 163 LQTFKNLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEVCGTSFLT 215
                NL  H  IH+GE+ + C+         SNL++H ++H T EK Y C   G +F+ 
Sbjct: 529 FTEHSNLTQHKKIHTGERPYKCNECGKAFTERSNLTQHKKIH-TGEKPYKCNESGKAFIQ 587

Query: 216 WSSLNSHKYSH-DDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIM 274
           +++L SH+  H + R + C+ CG ++K    L RH R     H+   P            
Sbjct: 588 FANLTSHQRIHSEQRPYRCNECGKAFKQFSNLTRHQR----IHTGEKP------------ 631

Query: 275 YWCNVC----SQRCYLSATCSIH---RPSNCKDQYKMSVSISNECDQHMECHT------C 321
           Y CN+C    +Q  +L+    IH   +P  C +  K  +  S +  +H   HT      C
Sbjct: 632 YKCNICDKVFNQNSHLTNHWRIHTGEKPHKCNECGKAFIKCS-DLWRHERIHTGEKPYKC 690

Query: 322 NECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDT 381
           NEC    +    LWDH     K +    KP     +  KV  +  W  +    RI   + 
Sbjct: 691 NECGKGFSKHSYLWDH-----KRIHTGEKPYKCV-ECGKVFRQ--WSTLRIHRRIHTGEK 742

Query: 382 MRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FK 440
             Y+C  C    K    L +H NIH  EK + C LCG  FIH SSLV H   H+  K +K
Sbjct: 743 P-YKCNECGKAFKQCSHLTKHQNIHPGEKPHKCSLCGKTFIHISSLVKHQKIHTGEKPYK 801

Query: 441 CDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK 500
           C+ C K +  R  L  H   +H  + K   C+ CG+ F    ++ KH   H+ E+P+ C 
Sbjct: 802 CNECGKAFIQRPSLVEH-QRIHTGE-KPHKCNECGKAFTVRSSLTKHKRHHTGEKPYKCN 859

Query: 501 LCGIAYKWRKNLVRHQK 517
            CG AY    +L RHQK
Sbjct: 860 ECGKAYTQFVHLTRHQK 876

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|440905011|gb|ELR55460.1| Zinc finger protein 26, partial [Bos grunniens mutus]

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 199/484 (41%), Gaps = 71/484 (14%)

Query: 64  HSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHL---LV 120
           H+ + P  + C++C + F   +NL  HM     +  + C +C        K+ H    L 
Sbjct: 283 HTGIKP--YKCKECGKDFSQSSNLTGHMKTHTRDQPYKCKVCG-------KHFHRSSDLT 333

Query: 121 RHMKQCHTMQVHI-PAVYKNFRS-----VTSFTMNNITQYKCPDCPAILQTFKNLKCHLD 174
            H K     Q++      K F S     V S     I  YKC +C         L  H++
Sbjct: 334 GHTKTHTGEQLYKCKECGKAFGSSSHLRVHSQIHTGIKIYKCQECGKTFTGSSRLIEHMN 393

Query: 175 IHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHD 227
            H+GEK F C +       +S L++H+++H T EK   C++CGT+F   S L  H  +H 
Sbjct: 394 THTGEKPFKCDMCGKTFTQSSCLTKHMKIH-TGEKPLKCDICGTTFTQTSYLTQHMRTHT 452

Query: 228 DRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYL 286
             K F C  CG ++    +L  HFR     H+   P            + C+ C +    
Sbjct: 453 GEKPFKCDKCGKAFAAYSYLSNHFRT----HTGEKP------------FKCDTCGKTFVQ 496

Query: 287 SATCSIHR-------PSNCKDQYKMSVSISNECDQHMECHT------CNECDSKHNDCQS 333
           S+  S H+       P  C D    + S S+   +HM  HT      C+ C         
Sbjct: 497 SSGLSQHKKTHTGEKPFKC-DTCGKTFSQSSYLSRHMRTHTGEKPYKCDTCGKGFGFSSI 555

Query: 334 LWDHVFSEHKNMLAF-SKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSL 392
           L  H+ S      A   K   +  + S + +       E+           Y+C  C   
Sbjct: 556 LRRHLQSHTGEKTAKCEKCGKTFTRASGLTQHMKTHTGEKP----------YKCDKCGKA 605

Query: 393 LKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHR 451
                 L +HF  HT EK + C+ CG  F   S L+ H  TH+  K FKCD C K ++  
Sbjct: 606 FADSSCLTKHFRTHTGEKPFKCDKCGKSFAVSSRLIEHMKTHTGEKPFKCDTCGKTFTRS 665

Query: 452 NRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKN 511
           + L  H+ T      K   CD CG+ F  S  + +H  +H+ E+PF C  CG A+    +
Sbjct: 666 SGLTEHMKT--HTGEKPFKCDTCGKTFTRSSGLTRHMKIHTGEKPFKCDTCGKAFASSSH 723

Query: 512 LVRH 515
           L+RH
Sbjct: 724 LIRH 727

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|392338646|ref|XP_003753590.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 43-like [Rattus norvegicus]

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 207/509 (40%), Gaps = 79/509 (15%)

Query: 62  TEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVR 121
           TE +    K + C+ C  +F   ++L  HM I      + C +C             L +
Sbjct: 241 TEENPYKXKPYKCEICGNAFCFSSSLRKHMIIHTGEKPYKCEVC----GKAFGSPSRLSK 296

Query: 122 HMKQCHTMQ-----------VHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLK 170
           H K+ HT +            H P++     SV          YKC  C           
Sbjct: 297 H-KKIHTEEKPYKCEVCGKAFHFPSLL----SVHKRIHTGEKPYKCEICGRAFHCPSIFS 351

Query: 171 CHLDIHSGEKDFSC-------HINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHK 223
            H  IH+GEK + C       +I+S LS H R+H T EK Y CEVCG +F   S L+ HK
Sbjct: 352 VHKRIHTGEKPYKCEVCGQAFNISSKLSHHKRIH-TREKPYKCEVCGKAFHYPSRLSKHK 410

Query: 224 YSHDD-----RKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAV----------- 267
             H       + F C  CG S++ P  L RH+R     H+   P +  +           
Sbjct: 411 KVHAGGNPYMKTFKCEECGKSFRFPSLLSRHYRV----HTGEKPYKCEICGNGFPYPSRL 466

Query: 268 -----KSLQDIMYWCNVCSQRCYLSATCSIHR-------PSNCKDQYKMSVSISNECDQH 315
                    +  Y C VC +  +  +  S+H+       P  C++  K +   S    +H
Sbjct: 467 STHMKTHTGEKPYQCEVCGKAFHDPSILSMHKKIHTGEKPYKCEECGK-TFRASALLSKH 525

Query: 316 MECHT------CNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKD 369
              HT      C EC     D   L     S HK +    KP   E       +  Y++ 
Sbjct: 526 KRIHTGEKPYKCEECGKTFRDSSLL-----SAHKRIHTGEKPYKCEV----CGKDFYYRS 576

Query: 370 VEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVA 429
              K + I  +   Y+C  C         L  H  IHT EK Y CE+CG  F + S L  
Sbjct: 577 KLNKHKKIHTEKNPYKCEVCGKAFDNRSRLSNHMKIHTEEKPYKCEVCGKAFHYLSILSK 636

Query: 430 HTTTHSNV-KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHA 488
           H   H+    +KC+ C K + + +RL  H   +H  + K   C++CG  F  S +++KH 
Sbjct: 637 HKIVHTEENPYKCEVCGKAFDYPSRLSNH-KKIHTGE-KPYKCEVCGNAFCYSSSLRKHK 694

Query: 489 AVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
            +H+  +P+ CK+CG  + +R  L +H+K
Sbjct: 695 IIHTGVKPYKCKVCGKGFDYRSRLYKHKK 723

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410053578|ref|XP_003316288.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 91 isoform 1 [Pan troglodytes]

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 224/545 (41%), Gaps = 94/545 (17%)

Query: 22   DITFPCEECKELCVLSKYCIKHK------------DCSKAMSTPAPSSESVCTEHSNL-- 67
            + ++ CEEC +  + S    +HK            +C KA S       S   +H  +  
Sbjct: 643  EKSYKCEECGKAFLWSSTLRRHKRIHTGEKPYKCEECGKAFS-----HSSALAKHKRIHT 697

Query: 68   FPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYA-HLLVRHMKQC 126
              K + C++C ++F N + L +H     E   + C  C    K +     H ++   ++ 
Sbjct: 698  GEKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKTFKRLSTLTKHKIIHAGEKL 757

Query: 127  HTMQVHIPAVYKNFR-SVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCH 185
            +  +    A  ++   ++  F       YKC +C        +L  H  IH+ EK F C 
Sbjct: 758  YKCEECGKAFNRSSNLTIHKFIHTGEKPYKCEECGKAFNWSSSLTKHKRIHTREKPFKCK 817

Query: 186  -------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCG 237
                    +S L+ H R+H T EK Y CE CG +F   S+LN HK  H   K + C  CG
Sbjct: 818  ECGKAFIWSSTLTRHKRIH-TGEKPYKCEECGKAFSRSSTLNKHKTIHTGEKPYKCKECG 876

Query: 238  NSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSN 297
             ++K+   L +H                 +    + +Y C  C +    S+    H+  +
Sbjct: 877  KAFKHSSALAKH----------------KIIHAGEKLYKCEECGKAFNQSSNLMTHKIIH 920

Query: 298  CKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNM------------ 345
             K++     S S ECD+ +                 +W    +EHK +            
Sbjct: 921  TKEK----PSKSEECDKAI-----------------IWSSTLTEHKRIHTREKTYKCEEC 959

Query: 346  -LAFSKPDD-SENKISKVAEKQY-----WKDVEEKC-----RIIVEDTMRYQCPHCPSLL 393
              AFS+P   + +K     EK Y      K   +       +II      Y+C  C    
Sbjct: 960  GKAFSQPSHLTTHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKPYKCEECGKAF 1019

Query: 394  KTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRN 452
            +   TL EH  IHT EK Y CE CG  F   S+L  HT  H+  K +KC+ C K ++  +
Sbjct: 1020 RKSSTLTEHKIIHTGEKPYKCEECGKAFSQSSTLTRHTRMHTGEKPYKCEECGKAFNRSS 1079

Query: 453  RLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNL 512
            +L  H   +H  + K   C+ CG+ F+ S  +  H  +H+ E+P+ C+ CG A+     L
Sbjct: 1080 KLTTH-KIIHTGE-KPYKCEECGKAFISSSTLNGHKRIHTREKPYKCEECGKAFSQSSTL 1137

Query: 513  VRHQK 517
             RH++
Sbjct: 1138 TRHKR 1142

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395750846|ref|XP_003780477.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 208, partial [Pongo abelii]

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 163/580 (28%), Positives = 238/580 (41%), Gaps = 104/580 (17%)

Query: 22  DITFPCEECKE----LCVLSKYCIKH--------KDCSKAMSTPAPSSESVCTEHSNLFP 69
           +  + CEEC +      VL+K+ + H        ++C KA S P+  +E   T H+   P
Sbjct: 374 ETPYKCEECGKGFSMFSVLTKHKVIHTGEKPYKCEECDKAFSWPSSLTEHKAT-HAGEKP 432

Query: 70  KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPD-SKIMIKYAHLLVRHMKQCHT 128
             + C++C ++F+  +NL  H  I      + C  C    S   I   H ++   ++ + 
Sbjct: 433 --YKCEECGKAFNWSSNLMEHKRIHTGEKPYKCEECGKSFSTFSILTKHKVIHTGEKPYK 490

Query: 129 MQVHIPAVYKNFRSVTSF---TMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCH 185
            +      YK + S  S+          YKC +C     TF  L  H  IH+GEK + C 
Sbjct: 491 CE-ECGKAYK-WSSTLSYHKKIHTGEKPYKCEECGKGFGTFSILTKHKVIHTGEKPYKCE 548

Query: 186 ---------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSH 235
                     +SNL EH R+ H  EK Y C+ CG  F T+S L  HK  H   K + C  
Sbjct: 549 ECGKAFTQGWSSNLMEHKRI-HAGEKPYKCKECGKGFSTFSILTKHKVIHTGEKPYKCEE 607

Query: 236 CGNSYKNPIFLKRHFRESHLKHSKSNPEQ----------YAVKSLQDIM------YWCNV 279
           CG +YK P  L  H +     H+   P +          +++ +  +++      Y C  
Sbjct: 608 CGKAYKWPSTLSYHKK----IHTVEKPYKCEECGKGFGTFSILTKHEVIHTGEKPYKCEE 663

Query: 280 CSQR--CYLSATCSIH-------RPSNCKDQYKMSVSISNECDQHMECHT------CNEC 324
           C +   C  S+T S H       +P  C++  K   ++S    +H   HT      C EC
Sbjct: 664 CGKAFTCKSSSTLSYHKKIHTGEKPYKCEECGKDFSTLSI-LTKHKVIHTGEKPYKCEEC 722

Query: 325 DSKHNDCQSLWDHVFSEHKNM-------------LAFSKPDD-SENKISKVAEKQY---- 366
               N     W     EHK +              AFS P   +E+K     EK Y    
Sbjct: 723 GKSFN-----WSSNLMEHKKIHTGETPYKCEEGDKAFSWPSSLTEHKAIHAGEKPYKCEE 777

Query: 367 ------WKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAY 420
                 W+    + +        Y+C  C         L EH  IHT EK Y CE CG  
Sbjct: 778 CGKAFSWRSSLTEHKATHAGEKPYKCEECGKAFNWSSNLMEHKRIHTGEKPYKCEECGKS 837

Query: 421 FIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYH--ISTVHENKWKSAACDICGRV 477
           F   S L  H   H+  K +KC+ C K Y   + L YH  I TV     K   C+ CG+ 
Sbjct: 838 FSTFSILTKHKVIHTGDKPYKCEECGKAYKWSSTLSYHKKIHTVE----KPYKCEECGKG 893

Query: 478 FLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           F+    + KH  +H+ E+ + C+ CG AYKW   L  H+K
Sbjct: 894 FVMFSILAKHKVIHTGEKLYKCEECGKAYKWPSTLRYHKK 933

Source: Pongo abelii

Species: Pongo abelii

Genus: Pongo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|338727212|ref|XP_001491806.3| PREDICTED: zinc finger protein 26-like [Equus caballus]

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 193/467 (41%), Gaps = 69/467 (14%)

Query: 70  KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLC-----PPDSKIMIKYAHLLVRHM- 123
           K + C++C ++F   +NL  H       +   C++C      P S I+ K  H   +   
Sbjct: 290 KPYQCEECGKAFSRSSNLIVHRKTHSGENTVECSICEKRFTSPSSLIVHKRTHTGEKPFE 349

Query: 124 -KQCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDF 182
            K C         +  + R     T +    +KC  C      F++L+ HL  HSG+K F
Sbjct: 350 CKVCGKAFAVSSTLRYHLR-----THSGEKPFKCDTCRKAYADFRSLRYHLTTHSGQKPF 404

Query: 183 SCHI-------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCS 234
            C I        S+L  H R H T EK Y CE CG +F T S+L  H+ +H   K + C 
Sbjct: 405 VCSICEKRFTSPSSLIIHKRTH-TGEKPYECEKCGQAFGTSSALPFHRRTHTGEKPYQCE 463

Query: 235 HCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHR 294
            CG +      L  H R     HS   P            + CN+C +R   S+    H+
Sbjct: 464 ACGKALATASALSYHLR----THSGEKP------------FECNLCEKRFATSSQLISHK 507

Query: 295 PSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDS 354
             +  ++                 + C EC              FS   N++   K    
Sbjct: 508 RIHTGEK----------------PYECEECGK-----------AFSRSSNLIVHRKTHSG 540

Query: 355 ENKIS-KVAEKQYWKDVEEKCRIIVEDTMR-YQCPHCPSLLKTFWTLKEHFNIHTSEKKY 412
           EN +   + EK++ +              + YQC  C   L T   L  H   H+ EK +
Sbjct: 541 ENTVECSICEKRFTRSSSLTAHKRTHTGEKPYQCEVCGKALATSSALSYHLRTHSGEKPF 600

Query: 413 VCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKWKSAAC 471
            C LC   F   S LV H  TH+  K F+C  C K ++  + LRYH+ T H  + K   C
Sbjct: 601 ECNLCEKRFATSSQLVLHKRTHTGEKPFECKVCGKAFAVSSTLRYHLRT-HSGE-KPFKC 658

Query: 472 DICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKN 518
           D CG+ + DS++++ H   HS ++PFVC +C   +    +L+ H++ 
Sbjct: 659 DTCGKAYADSRSLRYHLTTHSGQKPFVCSICEKRFTSPSSLIIHKRT 705

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	555
UNIPROTKB|P17038	809	ZNF43 "Zinc finger protein 43"	0.857	0.588	0.270	9.8e-44
UNIPROTKB|Q05481	1191	ZNF91 "Zinc finger protein 91"	0.830	0.387	0.263	1.1e-42
UNIPROTKB|A8MTY0	619	ZNF724P "Putative zinc finger	0.765	0.686	0.287	2.5e-42
UNIPROTKB|I3L1B3	1173	ZNF729 "Zinc finger protein 72	0.825	0.390	0.284	2.8e-42
UNIPROTKB|Q14588	700	ZNF234 "Zinc finger protein 23	0.864	0.685	0.271	8.9e-42
ZFIN|ZDB-GENE-110913-38	987	si:ch211-208f21.5 "si:ch211-20	0.882	0.496	0.267	1.3e-41
UNIPROTKB|O43345	1167	ZNF208 "Zinc finger protein 20	0.798	0.379	0.275	2e-41
UNIPROTKB|F1RMT4	908	F1RMT4 "Uncharacterized protei	0.827	0.505	0.276	3.7e-41
UNIPROTKB|J9P2R7	668	ZNF234 "Uncharacterized protei	0.854	0.709	0.280	4.8e-41
RGD|1594173	1665	Zfp748 "zinc finger protein 74	0.837	0.279	0.268	1.6e-40

UNIPROTKB|P17038 ZNF43 "Zinc finger protein 43" [Homo sapiens (taxid:9606)]

 Score = 468 (169.8 bits), Expect = 9.8e-44, P = 9.8e-44
 Identities = 143/528 (27%), Positives = 225/528 (42%)

Query:    17 VSRLQDITFPCEEC-KELCVL---SKYCIKH--------KDCSKAMSTPAPSSESVCTEH 64
             +S  +   F C+EC K  C+L   +++ I H        + C KA + P     S+ T+H
Sbjct:   166 ISHTEKKLFKCKECGKSFCMLPHLAQHKIIHTRVNFCKCEKCGKAFNCP-----SIITKH 220

Query:    65 S--NLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPD-SKIMIKYAHLLVR 121
                N   K ++C++C + F+  + L +H         + C  C    +K  I   H ++R
Sbjct:   221 KRINTGEKPYTCEECGKVFNWSSRLTTHKKNYTRYKLYKCEECGKAFNKSSILTTHKIIR 280

Query:   122 HMKQCHTMQVHIPAVYKNFRSVTSFTMNNITQ--YKCPDCPAILQTFKNLKCHLDIHSGE 179
               ++ +  +    A +    ++T     +  +  YKC +C         L  H  IH+GE
Sbjct:   281 TGEKFYKCKECAKA-FNQSSNLTEHKKIHPGEKPYKCEECGKAFNWPSTLTKHKRIHTGE 339

Query:   180 KDFSCH-----IN--SNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-F 231
             K ++C       N  SNL+ H R+H T EK Y C  CG +F   S+L  HK  H ++K +
Sbjct:   340 KPYTCEECGKAFNQFSNLTTHKRIH-TAEKFYKCTECGEAFSRSSNLTKHKKIHTEKKPY 398

Query:   232 SCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCS 291
              C  CG ++K    L  H     L H+   P  Y  +       W +  ++   +     
Sbjct:   399 KCEECGKAFKWSSKLTEH----KLTHTGEKP--YKCEECGKAFNWPSTLTKHNRIHTG-- 450

Query:   292 IHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHV--FSEHKNMLAFS 349
               +P  C+   K     SN    H   HT  E   K  +C   +      ++HK +    
Sbjct:   451 -EKPYKCEVCGKAFNQFSN-LTTHKRIHTA-EKPYKCEECGKAFSRSSNLTKHKKIHIEK 507

Query:   350 KPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSE 409
             KP   E +  K  +   W     + +I       Y+C  C      F  L +H  IHT E
Sbjct:   508 KPYKCE-ECGKAFK---WSSKLTEHKITHTGEKPYKCEECGKAFNHFSILTKHKRIHTGE 563

Query:   410 KKYVCELCGAYFIHKSSLVAHTTTHSNVKF-KCDFCEKVYSHRNRLRYHISTVHENKWKS 468
             K Y CE CG  F   S+L  H   H+  KF KC+ C K ++  + L  H   +H    K 
Sbjct:   564 KPYKCEECGKAFTQSSNLTTHKKIHTGEKFYKCEECGKAFTQSSNLTTH-KKIHTGG-KP 621

Query:   469 AACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQ 516
               C+ CG+ F     + KH  +H+ E+P+ C+ CG A+KW   L +H+
Sbjct:   622 YKCEECGKAFNQFSTLTKHKIIHTEEKPYKCEECGKAFKWSSTLTKHK 669

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q05481 ZNF91 "Zinc finger protein 91" [Homo sapiens (taxid:9606)]

 Score = 463 (168.0 bits), Expect = 1.1e-42, P = 1.1e-42
 Identities = 140/531 (26%), Positives = 221/531 (41%)

Query:    24 TFPCEECKELCVLSKYCIKHK------------DCSKAMSTPAPSSESVCTEHSNLFP-- 69
             ++ CEEC +  + S    +HK            +C KA S       S   +H  +    
Sbjct:   601 SYKCEECGKAFLWSSTLRRHKRIHTGEKPYKCEECGKAFS-----HSSALAKHKRIHTGE 655

Query:    70 KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYA-HLLVRHMKQCHT 128
             K + C++C ++F N + L +H     E   + C  C    K +     H ++   ++ + 
Sbjct:   656 KPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKTFKRLSTLTKHKIIHAGEKLYK 715

Query:   129 MQVHIPAVYKNFR-SVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHI- 186
              +    A  ++   ++  F       YKC +C        +L  H  IH+ EK F C   
Sbjct:   716 CEECGKAFNRSSNLTIHKFIHTGEKPYKCEECGKAFNWSSSLTKHKRIHTREKPFKCKEC 775

Query:   187 ------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNS 239
                   +S L+ H R+H T EK Y CE CG +F   S+L  HK  H   K + C  CG +
Sbjct:   776 GKAFIWSSTLTRHKRIH-TGEKPYKCEECGKAFSRSSTLTKHKTIHTGEKPYKCKECGKA 834

Query:   240 YKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCK 299
             +K+   L +H     + H+               +Y C  C +    S+  + H+  + K
Sbjct:   835 FKHSSALAKH----KIIHAGEK------------LYKCEECGKAFNQSSNLTTHKIIHTK 878

Query:   300 DQYKMSVSISNECD----------QHMECHTCNECDSKHNDCQSLWDHV--FSEHKNMLA 347
             ++     S S ECD          +H   HT  E   K  +C   +      + HK M  
Sbjct:   879 EK----PSKSEECDKAFIWSSTLTEHKRIHT-REKTYKCEECGKAFSQPSHLTTHKRMHT 933

Query:   348 FSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHT 407
               KP   E +  K   +          +II      Y+C  C    +   TL EH  IHT
Sbjct:   934 GEKPYKCE-ECGKAFSQSSTLTTH---KIIHTGEKPYKCEECGKAFRKSSTLTEHKIIHT 989

Query:   408 SEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKW 466
              EK Y CE CG  F   S+L  HT  H+  K +KC+ C K ++  ++L  H   +H  + 
Sbjct:   990 GEKPYKCEECGKAFSQSSTLTRHTRMHTGEKPYKCEECGKAFNRSSKLTTH-KIIHTGE- 1047

Query:   467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
             K   C+ CG+ F+ S  +  H  +H+ E+P+ C+ CG A+     L RH++
Sbjct:  1048 KPYKCEECGKAFISSSTLNGHKRIHTREKPYKCEECGKAFSQSSTLTRHKR 1098

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

UNIPROTKB|A8MTY0 ZNF724P "Putative zinc finger protein 724" [Homo sapiens (taxid:9606)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 144/501 (28%), Positives = 207/501 (41%)

Query:    70 KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTM 129
             K   C K  + F   +N   H   K E + F C  C    K     +HL  +H K+ HT 
Sbjct:   143 KIFQCDKYVKDFHKFSNSNRH---KTEKNPFKCKEC---GKSFCVLSHL-TQH-KRIHTT 194

Query:   130 --QVHIPAVYKNFRSVTSFTMNNITQ-----YKCPDCPAILQTFKNLKCHLDIHSGEKDF 182
                  +    K F   ++ + +         YKC +C        +L  H  IH+GEK +
Sbjct:   195 VNSYKLEECGKAFNVSSTLSQHKRIHTGQKHYKCEECGIAFNKSSHLNTHKIIHTGEKSY 254

Query:   183 S---CHINSNLSEHIRMH---HTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSH 235
                 C    N+S H+  H   HT E  Y C+ CG +F   S+L  HK  H   K + C H
Sbjct:   255 KREECGKAFNISSHLTTHKIIHTGENAYKCKECGKAFNQSSTLTRHKIIHAGEKPYICEH 314

Query:   236 CGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHR- 294
             CG ++     L +H R     H+   P            Y C  C +   +S+T + H+ 
Sbjct:   315 CGRAFNQSSNLTKHKRI----HTGDKP------------YKCEECGKAFNVSSTLTQHKR 358

Query:   295 ------PSNCKDQYKMSVSISNECDQHMECHT------CNECDSKHNDCQSLWDHVFSEH 342
                   P  C++  K + ++S+   QH   HT      C EC    N    L     + H
Sbjct:   359 IHTGEKPYKCEECGK-AFNVSSTLTQHKRIHTGEKPYKCEECGKAFNTSSHL-----TTH 412

Query:   343 KNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEH 402
             K +    KP   E +  K A  Q+ +    K  II      Y+C  C    K    L EH
Sbjct:   413 KRIHTGEKPYKCE-ECGK-AFNQFSQLTTHK--IIHTGEKPYKCKECGKAFKRSSNLTEH 468

Query:   403 FNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTV 461
               IHT EK Y CE CG  F   S L  H   H+  K +KC  C K ++  + L  H   +
Sbjct:   469 RIIHTGEKPYKCEECGKAFNLSSHLTTHKKIHTGEKPYKCKECGKAFNQSSTLARH-KII 527

Query:   462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQ----- 516
             H  + K   C+ CG+ F    N+ +H  +H+ E+P+ C+ CG A+ W   L +H+     
Sbjct:   528 HAGE-KPYKCEECGKAFYQYSNLTQHKIIHTGEKPYKCEECGKAFNWSSTLTKHKVIHTG 586

Query:   517 ------KNC-KASAKCSLMTT 530
                   K C KA  +CS +TT
Sbjct:   587 EKPYKCKECGKAFNQCSNLTT 607

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|I3L1B3 ZNF729 "Zinc finger protein 729" [Homo sapiens (taxid:9606)]

 Score = 459 (166.6 bits), Expect = 2.8e-42, P = 2.8e-42
 Identities = 151/530 (28%), Positives = 220/530 (41%)

Query:    25 FPCEEC----KELCVLSKYCIKH--------KDCSKAMSTPAPSSESVCTEHSNLFP--K 70
             + CEEC     +   L K+ I H        ++C KA +     S S   +H  +    K
Sbjct:   404 YKCEECGKAFSQFSTLKKHKIIHTGKKPYKCEECGKAFN-----SSSTLMKHKIIHTGEK 458

Query:    71 CHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQ 130
              + C++C ++F   ++L  H  I      + C  C    K    ++ L  RH K  HT +
Sbjct:   459 PYKCEECGKAFRQSSHLTRHKAIHTGEKPYKCEEC---GKAFNHFSDLR-RH-KIIHTGK 513

Query:   131 --VHIPAVYKNFRSVTSFTMNNITQ-----YKCPDCPAILQTFKNLKCHLDIHSGEKDFS 183
                      K F   ++   + I       YKC +C    +    L  H  IH+GEK   
Sbjct:   514 KPYKCEECGKAFSQSSTLRNHQIIHTGEKPYKCEECGKAFKWSSKLTVHKVIHTGEKPCK 573

Query:   184 CHINSNLSEH---IRMH---HTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHC 236
             C       +H   +R H   HT EK Y CE CG +F   S L  HK  H  +K + C  C
Sbjct:   574 CEECGKAFKHFSALRKHKVIHTREKLYKCEECGKAFNNSSILAKHKIIHTGKKPYKCEEC 633

Query:   237 GNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQR-CYLSATCS---I 292
             G +++    L RH       H+   P            Y C  C +   + SA      I
Sbjct:   634 GKAFRQSSHLTRH----KAIHTGEKP------------YKCEECGKAFSHFSALRRHKII 677

Query:   293 H---RPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSL--WDHVFSEHKNMLA 347
             H   +P  C++  K + S  +   +H   HT  E   K  +C     W    + HK +  
Sbjct:   678 HTGKKPYKCEECGK-AFSHFSALRRHKIIHT-GEKPYKCEECGKAFKWSSKLTVHKVIHT 735

Query:   348 FSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHT 407
               KP   E +  K + K +      K ++I      Y+C  C     +F  L +H  IHT
Sbjct:   736 AEKPCKCE-ECGK-SFKHF--SALRKHKVIHTREKLYKCEECVKAFNSFSALMKHKVIHT 791

Query:   408 SEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKW 466
              EK Y CE CG  F   S L  H   H+  K  KC+ C K + H + LR H   +H  K 
Sbjct:   792 GEKPYKCEECGKAFKWSSKLTVHKVIHTGEKPCKCEECGKAFKHFSALRKH-KVIHTGK- 849

Query:   467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQ 516
             K   C+ CG+ F  S +++KH  +HS E+P+ C+ CG A+KW   L  H+
Sbjct:   850 KPYKCEECGKAFSQSSSLRKHEIIHSGEKPYKCEECGKAFKWLSKLTVHK 899

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q14588 ZNF234 "Zinc finger protein 234" [Homo sapiens (taxid:9606)]

 Score = 447 (162.4 bits), Expect = 8.9e-42, P = 8.9e-42
 Identities = 147/542 (27%), Positives = 229/542 (42%)

Query:     8 FHFDVESCAVSRLQDITFPCEEC-KELCVLS-----------KYCIKHKDCSKAMSTPAP 55
             F+FD+     S  +  T  C+EC K  C +S           + C K   C K  S    
Sbjct:   161 FNFDLHQQLHSGEKSHT--CDECGKSFCYISALHIHQRVHMGEKCYKCDVCGKEFSQ--- 215

Query:    56 SSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKY 115
             SS     +  +   K   C +C + F   + L  H  +      + C  C    +  I  
Sbjct:   216 SSHLQTHQRVHTVEKPFKCVECGKGFSRRSTLTVHCKLHSGEKPYNCEEC---GRAFIHA 272

Query:   116 AHLLVRHMKQCHTMQ--VHIPAVYKNFR---SVTSFTMNNITQ--YKCPDCPAILQTFKN 168
             +HL   H +  HT +         KNFR   ++ +  M +  +  YKC DC        N
Sbjct:   273 SHLQ-EHQR-IHTGEKPFKCDTCGKNFRRRSALNNHCMVHTGEKPYKCEDCGKCFTCSSN 330

Query:   169 LKCHLDIHSGEKDFSCH------IN-SNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNS 221
             L+ H  +H+GEK + C       I  S    H R+H T EK Y+C+VCG  F+  SS  +
Sbjct:   331 LRIHQRVHTGEKPYKCEECGKCFIQPSQFQAHRRIH-TGEKPYVCKVCGKGFIYSSSFQA 389

Query:   222 HKYSHDDRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAV--KSLQDIMYWCN 278
             H+  H   K + C+ CG S++    +K H++   + H+   P +  V  K+ +   Y   
Sbjct:   390 HQGVHTGEKPYKCNECGKSFR----MKIHYQVHLVVHTGEKPYKCEVCGKAFRQSSYL-- 443

Query:   279 VCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHV 338
                 + +L A  S+ +P  C ++     + S+    H   HT  E   K  +C   +   
Sbjct:   444 ----KIHLKAH-SVQKPFKC-EECGQGFNQSSRLQIHQLIHT-GEKPYKCEECGKGFSRR 496

Query:   339 --FSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTF 396
                  H  +    KP + E +  KV  +       ++   +      ++C  C       
Sbjct:   497 ADLKIHCRIHTGEKPYNCE-ECGKVFSQASHLLTHQR---VHSGEKPFKCEECGKSFSRS 552

Query:   397 WTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLR 455
               L+ H  +HT EK Y C  CG  F    +L  H   H+  K + C  C K +S  + L+
Sbjct:   553 AHLQAHQKVHTGEKPYKCGECGKGFKWSLNLDMHQRVHTGEKPYTCGECGKHFSQASSLQ 612

Query:   456 YHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRH 515
              H S VH  + K   CD+CG+VF  S  ++ H  VH+ E+P+ C++CG  + WR NLV H
Sbjct:   613 LHQS-VHTGE-KPYKCDVCGKVFSRSSQLQYHRRVHTGEKPYKCEICGKRFSWRSNLVSH 670

Query:   516 QK 517
              K
Sbjct:   671 HK 672

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

ZFIN|ZDB-GENE-110913-38 si:ch211-208f21.5 "si:ch211-208f21.5" [Danio rerio (taxid:7955)]

 Score = 451 (163.8 bits), Expect = 1.3e-41, P = 1.3e-41
 Identities = 151/564 (26%), Positives = 233/564 (41%)

Query:     2 QDYHCEFHFDVESCAVSRLQDITFPCEEC-KELCV---LSKYCIKHK--------DCSKA 49
             + + C  H +V    +    +  F C +C K       L+K+ + H          C K 
Sbjct:    44 KSFSCLSHLNVHM--MIHTGEKPFTCTQCGKSFSKSSHLNKHMMSHTGEKPFTCTQCGKR 101

Query:    50 MSTPAPSSESVCTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDS 109
              S  +  S+ +   H+   P   +C +C +SF   ++L  HM I      F C  C    
Sbjct:   102 FSQSSSRSKHMMI-HTGEKP--FTCTQCGKSFSQLSHLDLHMMIHTGEKPFTCTQC---G 155

Query:   110 KIMIKYAHLLVRHMKQCHTMQVHIPAVY--KNFRSVTSFTMN-NI----TQYKCPDCPAI 162
             K     +HL   H    HT +     +   K+F   +S   +  I      + C  C   
Sbjct:   156 KSFNYLSHL--NHHMMIHTGEKPFTCLQCGKSFSKSSSLNQHMRIHTGEKPFTCTQCGKS 213

Query:   163 LQTFKNLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKKYICEVCGTSFLT 215
                  +L  H+ IH+GEK F+C         +SNL++H+R+H T EK +IC  CG SF  
Sbjct:   214 FSKSSSLNKHMRIHTGEKPFTCTQCGKCFTCSSNLNQHMRIH-TGEKPFICTQCGKSFSQ 272

Query:   216 WSSLNSH-KYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIM 274
              SSLN H K+   ++ F+C+ CG S+     L +H R     H+   P  +         
Sbjct:   273 SSSLNYHMKFHAGEKPFTCTQCGKSFSQSSHLNKHMRI----HTGEKP--FTCTQCGK-- 324

Query:   275 YWCNVCSQRCYLSATCSIH---RPSNCKDQYKMSVSISNECDQHMECHT------CNECD 325
               C  CS    L+    IH   +P  C  Q   S S S   + HM+ HT      C +C 
Sbjct:   325 --CFTCSSN--LNQHMRIHTGEKPFICT-QCGKSFSQSTSLNYHMKIHTGEKPFTCTQCG 379

Query:   326 SKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQ 385
                +   +L  H+   H     F      ++  S+++         +  RI   + + + 
Sbjct:   380 KSFSHSANLNQHMII-HTGERPFMCTPCGKS-FSQLSS------FNQHMRIHTGEKL-FS 430

Query:   386 CPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFC 444
             C  C         L  H  IHT EK + C  CG  F   S+L+ HT  H+  K F C  C
Sbjct:   431 CTQCGKSFSQSSNLILHMRIHTGEKPFTCTQCGKSFSQSSNLILHTRIHTGEKPFTCTQC 490

Query:   445 EKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGI 504
              K +SH + L  H+  +H  + K   C  CG+ F  S ++ +H  +H+ E+PF C  CG 
Sbjct:   491 GKSFSHSSSLNQHMM-IHTGE-KPFTCTQCGKSFSQSLSLNQHMKIHTGEKPFTCTKCGK 548

Query:   505 AYKWRKNLVRHQK--NCKASAKCS 526
             ++     L +H +    K S  C+
Sbjct:   549 SFNQSSYLNKHMRIHTGKRSFTCT 572

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|O43345 ZNF208 "Zinc finger protein 208" [Homo sapiens (taxid:9606)]

 Score = 451 (163.8 bits), Expect = 2.0e-41, P = 2.0e-41
 Identities = 138/501 (27%), Positives = 208/501 (41%)

Query:    42 KHKDCSKAMSTPAPSSESVCTEHSNLFP--KCHSCQKCEESFDNCNNLWSHMFIKHENSD 99
             K ++C KA +  A     +  +H  +    K + C++C ++F   + L +H  I      
Sbjct:   678 KCEECGKAFNRSA-----ILIKHKRIHTDEKPYKCEECGKTFSKVSTLTTHKAIHAGEKP 732

Query:   100 FVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPA-----VYKNFRSVTSFTMNNIT-- 152
             + C  C    K   K++ +L +H K  HT +           YK + S  S+     T  
Sbjct:   733 YKCKEC---GKAFSKFS-ILTKH-KVIHTGEKPYKCEECGKAYK-WPSTLSYHKKIHTGE 786

Query:   153 -QYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHIN-------SNLSEHIRMHHTEEKKY 204
               YKC +C      F  L  H  IH+GEK + C          S  S+H +  H  EK Y
Sbjct:   787 KPYKCEECGKGFSMFSILTKHEVIHTGEKPYKCEECGKAFSWLSVFSKH-KKTHAGEKFY 845

Query:   205 ICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPE 263
              CE CG ++ T+S L  HK  H   K + C  CG ++     L  H +     H+   P 
Sbjct:   846 KCEACGKAYNTFSILTKHKVIHTGEKPYKCEECGKAFNWSSNLMEHKKI----HTGETP- 900

Query:   264 QYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHT--- 320
              Y  +       W +  ++     AT +  +P  C++  K + S  +   +H   H    
Sbjct:   901 -YKCEECDKAFSWPSSLTEH---KATHAGEKPYKCEECGK-AFSWPSRLTEHKATHAGEE 955

Query:   321 ---CNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRII 377
                C EC    N     W     EHK +    KP     K  +  +      +  K ++I
Sbjct:   956 PYKCEECGKAFN-----WSSNLMEHKRIHTGEKP----YKCEECGKSFSTFSILTKHKVI 1006

Query:   378 VEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV 437
                   Y+C  C    K   TL  H  IHT EK Y CE CG  F+  S L  H   H+  
Sbjct:  1007 HTGEKPYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKGFVMFSILAKHKVIHTGE 1066

Query:   438 K-FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERP 496
             K +KC+ C K Y   + LRYH   +H  + K   C+ CG+ F     + KH  +H+ E+P
Sbjct:  1067 KLYKCEECGKAYKWPSTLRYH-KKIHTGE-KPYKCEECGKAFSTFSILTKHKVIHTGEKP 1124

Query:   497 FVCKLCGIAYKWRKNLVRHQK 517
             + C+ CG A+ W     +H+K
Sbjct:  1125 YKCEECGKAFSWLSVFSKHKK 1145

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0003677 "DNA binding" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

UNIPROTKB|F1RMT4 F1RMT4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 446 (162.1 bits), Expect = 3.7e-41, P = 3.7e-41
 Identities = 147/531 (27%), Positives = 223/531 (41%)

Query:    25 FPCEECKE--LCVLSKYC----------IKHKDCSKAMSTPAPSSESVCTEHSNLFPKCH 72
             + CEEC    +C  + Y            K ++C K  S P+ S ++    H+   P  +
Sbjct:   408 YKCEECGRGFICSSNLYIHQRVHTGEKPYKCEECGKGFSRPS-SLQAHQGIHTGEKP--Y 464

Query:    73 SCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQ-- 130
              C +C +SF   ++   H+ +      + C +C    K   + ++L + H K  H+++  
Sbjct:   465 KCDECGKSFRRNSHYQVHLVVHTGEKPYKCEVC---GKGFSQSSYLQI-HQK-AHSIEKP 519

Query:   131 VHIPAVYKNFRSVTSFTMNNITQ-----YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCH 185
                    + F   +   ++ +       YKC DC        +LK H  IH+GEK ++C 
Sbjct:   520 YKCEECGQGFNQSSRLQIHQLIHTGEKPYKCEDCGKGFSRRADLKIHCRIHTGEKPYNCE 579

Query:   186 I-------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCG 237
                      SNL  H R+H + EK + CE CG SF   S L +H+  H   K + C  CG
Sbjct:   580 ECGKVFRQASNLLAHQRVH-SGEKPFKCEECGKSFGRSSHLQAHQKVHTGEKPYKCEECG 638

Query:   238 NSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVC----SQRCYLSATCSIH 293
               +K  + L  H R     H+   P            Y C  C    SQ   L    S+H
Sbjct:   639 KGFKWSLNLDMHQRV----HTGEKP------------YKCGECGKHFSQASSLQLHQSVH 682

Query:   294 ---RPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHV--FSEHKNMLAF 348
                +P  C D      S S++   H   HT  E   K   C   +     +  H+ +   
Sbjct:   683 TGEKPYRC-DVCGKVFSRSSQLQSHQRVHT-GEKPYKCEACGKGFTQAAHYHIHQRVHTG 740

Query:   349 SKPDDSENKISKVAEKQYWKDVEEKC-RIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHT 407
              KP   +     V  K +  +    C R +      Y+C  C         L  HF +HT
Sbjct:   741 EKPYKCD-----VCGKGFSHNSPLICHRRVHTGEKPYRCEACGKGFTRNTDLHIHFRVHT 795

Query:   408 SEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKW 466
              EK Y C+ CG  F   S+L  H   H+  K FKC+ C K +S  ++L+ H   VH  + 
Sbjct:   796 GEKPYKCKECGKGFSQASNLQVHQNVHTGEKRFKCETCGKGFSQSSKLQTH-QRVHTGE- 853

Query:   467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
             K   CD+CG+ F  S N+K H  +H+ E+P+ C+ CG  + WR NL  HQ+
Sbjct:   854 KPYRCDVCGKDFSYSSNLKLHQVIHTGEKPYKCEECGKGFSWRSNLHAHQR 904

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9P2R7 ZNF234 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 439 (159.6 bits), Expect = 4.8e-41, P = 4.8e-41
 Identities = 153/546 (28%), Positives = 223/546 (40%)

Query:     9 HFDVESCAVSRLQDITFPCEEC-KELCVLSKYCIKHK-----DCSKAMSTPAPSSESVCT 62
             +FD+     S ++  T  C EC K  C  S   I  +        K        S+S C 
Sbjct:   131 NFDLHQQIHSGVKSHT--CRECGKSFCYSSALHIHQRVHLGEKRYKCDECGKEFSQSSCL 188

Query:    63 E-HSNLFP--KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLL 119
             + H  +    K   C+KC   F   + L  H  +  E   + C+ C    +  I  +HL 
Sbjct:   189 QTHQKVHTVEKPFKCEKCGNGFCRRSALNVHYKLHMEEKPYNCDQC---GRAFIHASHLQ 245

Query:   120 VRHMKQCHTMQVHIPA--VYKNFR---SVTSFTMNNITQ--YKCPDCPAILQTFKNLKCH 172
               H +  HT +         KNFR   S+ S  M +  +  YKC +C        NL  H
Sbjct:   246 -EHQR-IHTGEKPFKCDKCGKNFRRRSSLNSHCMVHTGEKLYKCEECGKCFFCSSNLHIH 303

Query:   173 LDIHSGEKDFSCH-INSNLSE--HIRMH---HTEEKKYICEVCGTSFLTWSSLNSHKYSH 226
                H+ EK + C        +  H R H   HT EK Y+C+VCG  F   S+L +H+  H
Sbjct:   304 QKGHTREKPYKCEECGKGFIQPSHFRAHQRIHTGEKPYVCKVCGKGFTMSSNLQAHQRVH 363

Query:   227 DDRK-FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVC----S 281
                K + C  CG ++      K  ++   + H+   P            Y C VC    S
Sbjct:   364 TGEKPYKCDECGKNFGT----KTRYQVHLVVHTGERP------------YKCEVCGKDFS 407

Query:   282 QRCYLSA---TCSIHRPSNCKDQYKMSVSISNECDQHMECHT------CNECDSKHNDCQ 332
             QR YL +   T S+ +P  C ++     + S+    H   HT      C EC    N   
Sbjct:   408 QRAYLQSHLKTHSVEKPYKC-EECGQGFNQSSRLQIHQLIHTGEKPHKCEECGKGFNRRA 466

Query:   333 SLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSL 392
              L  H    H       KP + E +  KV  +       ++   I      ++C  C   
Sbjct:   467 DLKIHC-RIHTG----EKPFNCE-ECGKVFRQAANLLAHQR---IHSGEKPFKCEECGKS 517

Query:   393 LKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHR 451
                   L+ H  +HT EK Y CE CG  F    +L  H   H+  K +KC  C K +S  
Sbjct:   518 FGRSSHLQAHQKVHTGEKPYKCEECGKGFKWSLNLDMHQRVHTGEKPYKCGECGKHFSQA 577

Query:   452 NRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKN 511
             + L+ H S VH  + K   CD+CG+VF  S  ++ H  VH+ E P+ C+ CG +++WR  
Sbjct:   578 SSLKVHQS-VHSEE-KPYKCDVCGKVFRHSSQLQSHQRVHTGETPYKCETCGQSFRWRSK 635

Query:   512 LVRHQK 517
             L  H+K
Sbjct:   636 LSHHRK 641

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1594173 Zfp748 "zinc finger protein 748" [Rattus norvegicus (taxid:10116)]

 Score = 445 (161.7 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 141/525 (26%), Positives = 224/525 (42%)

Query:    25 FPCEEC-KELCV---LSKYCIKH--------KDCSKAMSTPAPSSESVCTE-HSNLFPKC 71
             + CE C K  C    LSK+   H        K+C KA   P  SS S   + H+   P  
Sbjct:   134 YQCEVCGKAFCFPPSLSKHKRIHTGEKPYKCKECGKAFRFP--SSLSAHKKIHTGEKP-- 189

Query:    72 HSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHM-KQCHTMQ 130
             + C  C ++F   + L  H  I      + C +C     +  K +H  + H  ++ +  +
Sbjct:   190 YKCDVCGKAFHYPSLLSKHKIIHTGEKPYKCEVCGQAFHVASKLSHHKIIHTGEKPYKCE 249

Query:   131 VHIPAV-YKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHI--- 186
             +   A  Y +  S           YKC  C         L  H  +H+GEK + C +   
Sbjct:   250 ICGKAFHYSSLLSKHKIIHTGKKPYKCDICDKAFYYPSRLSSHTKMHTGEKPYKCEVCGK 309

Query:   187 ----NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYK 241
                  S+LS+H R+H    K Y CEVCG +F   S L  HK  H   K + C  CG ++ 
Sbjct:   310 AFCSPSSLSKHKRIHKGV-KPYKCEVCGKAFRFPSLLLIHKGIHTGEKPYKCEECGKAFY 368

Query:   242 NPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQ 301
              P  L +H R     H+   P            Y C VC +  ++S++ S HR  +  ++
Sbjct:   369 YPSLLSKHKRV----HTGEKP------------YQCEVCGKGFHVSSSLSKHRIIHTGEK 412

Query:   302 -YKMSVS-----ISNECDQHMECHTCNECDSKHNDCQSLWDH--VFSEHKNMLAFSKPDD 353
              YK  V       S+   +H   HT  +   K  +C   +    + S+HK      KP +
Sbjct:   413 PYKCEVCEKAFRFSSSLSKHKRIHTGKK-PYKCEECGKAFHFPSLLSKHKISHTREKPYN 471

Query:   354 SENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYV 413
              +       +  Y+  +  K ++I      ++C  C         L  H  IHT EK Y 
Sbjct:   472 CD----LCGKAFYYPSLLSKHKMIHTGEKPHKCDVCGKAFHYPSKLSNHKKIHTGEKPYK 527

Query:   414 CELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACD 472
             C++CG  F   SSL  H  TH+    +KC+ C K +   ++L +H   +H  + K   C+
Sbjct:   528 CDICGNVFRFPSSLSEHKRTHTGENPYKCEVCGKAFHVPSKLSHH-KIIHTGE-KPYKCE 585

Query:   473 ICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
             +CG+ F     + KH  +H+ ++P+ C++CG A+ +   L +H+K
Sbjct:   586 VCGKAFHYPSLLSKHKIIHTGKKPYKCEVCGKAFHYPSRLSKHKK 630

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0030674 "protein binding, bridging" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	555
KOG1074|consensus	958		99.96
KOG2462|consensus	279		99.94
KOG1074|consensus	958		99.93
KOG3608|consensus	467		99.93
KOG2462|consensus	279		99.92
KOG3608|consensus	467		99.91
KOG3623|consensus	1007		99.87
KOG3623|consensus	1007		99.82
KOG3576|consensus	267		99.66
KOG3576|consensus	267		99.6
PLN03086	567	PRLI-interacting factor K; Provisional	99.08
PHA00733	128	hypothetical protein	99.02
PLN03086	567	PRLI-interacting factor K; Provisional	98.99
PHA00733	128	hypothetical protein	98.9
PHA02768	55	hypothetical protein; Provisional	98.85
KOG3993|consensus	500		98.65
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.63
PHA02768	55	hypothetical protein; Provisional	98.58
KOG3993|consensus	500		98.55
PHA00616	44	hypothetical protein	98.4
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.39
PHA00616	44	hypothetical protein	98.31
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.2
PHA00732	79	hypothetical protein	98.14
KOG1146|consensus	1406		98.09
PHA00732	79	hypothetical protein	98.03
KOG1146|consensus	1406		97.97
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.79
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.69
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.63
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.61
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.46
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.44
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.27
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.2
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.2
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.11
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.66
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.55
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.55
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.44
smart00355	26	ZnF_C2H2 zinc finger.	96.36
smart00355	26	ZnF_C2H2 zinc finger.	96.36
KOG2231|consensus	669		96.24
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.13
PRK04860	160	hypothetical protein; Provisional	96.11
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.79
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.68
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.58
KOG2231|consensus	669		95.47
KOG2482|consensus	423		95.44
KOG2785|consensus	390		95.31
KOG2785|consensus	390		94.96
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.87
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.61
PRK04860	160	hypothetical protein; Provisional	94.56
COG5048	467	FOG: Zn-finger [General function prediction only]	93.66
KOG4173|consensus	253		93.57
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.2
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.78
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.68
KOG2482|consensus	423		91.28
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.2
KOG2893|consensus	341		90.04
KOG4173|consensus	253		89.4
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.83
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	88.8
COG5048	467	FOG: Zn-finger [General function prediction only]	88.41
KOG2893|consensus	341		86.5
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.88
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	82.86
COG4049	65	Uncharacterized protein containing archaeal-type C	81.9

>KOG1074|consensus

Probab=99.96  E-value=2.2e-30  Score=261.31  Aligned_cols=147  Identities=29%  Similarity=0.560  Sum_probs=132.7

Q ss_pred             cceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC-----CccCC---CChhhcCChHH
Q psy11590        382 MRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV-----KFKCD---FCEKVYSHRNR  453 (555)
Q Consensus       382 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-----~~~C~---~C~~~f~~~~~  453 (555)
                      .|.+|-+|-+....++.|+.|+++|+|+|||+|.+||+.|+++.+|+.|+-+|..+     +|.|+   +|.+.|.....
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            46899999999999999999999999999999999999999999999999999765     58999   99999999999


Q ss_pred             HHHHHhhhcCCCc-------------------------------------------------------------------
Q psy11590        454 LRYHISTVHENKW-------------------------------------------------------------------  466 (555)
Q Consensus       454 L~~H~~~~H~~~~-------------------------------------------------------------------  466 (555)
                      |..|++.|-++..                                                                   
T Consensus       684 lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~  763 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSC  763 (958)
T ss_pred             ccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccc
Confidence            9999999331110                                                                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy11590        467 --------------------------------------------------------------------------------  466 (555)
Q Consensus       467 --------------------------------------------------------------------------------  466 (555)
                                                                                                      
T Consensus       764 ~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t  843 (958)
T KOG1074|consen  764 GRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLAT  843 (958)
T ss_pred             ccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------cccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhH
Q psy11590        467 ----------------------------------KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNL  512 (555)
Q Consensus       467 ----------------------------------~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L  512 (555)
                                                        ....|.+||+.|...++|..|+++|+|++||.|.+|++.|..+.+|
T Consensus       844 ~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnL  923 (958)
T KOG1074|consen  844 KTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNL  923 (958)
T ss_pred             ccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhh
Confidence                                              0146999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCccccCcc
Q psy11590        513 VRHQKNCKASAKCSLM  528 (555)
Q Consensus       513 ~~H~~~h~~~~~~~~~  528 (555)
                      +.||.+|+...|..=+
T Consensus       924 KvHMgtH~w~q~~srr  939 (958)
T KOG1074|consen  924 KVHMGTHMWVQPPSRR  939 (958)
T ss_pred             hhhhccccccCCCccC
Confidence            9999999998876544

>KOG2462|consensus

Probab=99.94  E-value=1e-27  Score=214.50  Aligned_cols=135  Identities=31%  Similarity=0.670  Sum_probs=128.4

Q ss_pred             CcceecCCCcccccCHHHHHHHHhhccC---CCccccccccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHHHH
Q psy11590        381 TMRYQCPHCPSLLKTFWTLKEHFNIHTS---EKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYH  457 (555)
Q Consensus       381 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~---~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H  457 (555)
                      ...|+|+.||+.+.+.++|.+|.++|-.   .+.+.|++|++.|.+..+|..|+++|+ .+++|.+||+.|...+.|+-|
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhcc
Confidence            4469999999999999999999999964   678999999999999999999999998 589999999999999999999


Q ss_pred             HhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHh
Q psy11590        458 ISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       458 ~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      +|+ |+|+ |||.|..|+|+|.+.++|+.||++|.+.++|+|..|+|+|..++-|.+|...
T Consensus       207 iRT-HTGE-KPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  207 IRT-HTGE-KPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccc-ccCC-CCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            999 8888 9999999999999999999999999999999999999999999999999764

>KOG1074|consensus

Probab=99.93  E-value=7.1e-27  Score=236.14  Aligned_cols=107  Identities=25%  Similarity=0.417  Sum_probs=81.3

Q ss_pred             ccchhhhhhccccCCceeecCccCccccchhhhhhhhhhcC-----CCcccCC---CCCccCCCchHHHhHHHhhcCCCC
Q psy11590        187 NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHD-----DRKFSCS---HCGNSYKNPIFLKRHFRESHLKHS  258 (555)
Q Consensus       187 ~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-----~~~~~C~---~C~~~f~~~~~L~~H~~~~H~~h~  258 (555)
                      .+.|+-|.|+| +||+||+|.+|++.|.++..|+.||-+|.     ...|.|+   +|.+.|.+...|..|+++    |.
T Consensus       618 ~saLqmHyrtH-tGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIri----H~  692 (958)
T KOG1074|consen  618 PSALQMHYRTH-TGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRI----HL  692 (958)
T ss_pred             hhhhhhhhhcc-cCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccceEEe----ec
Confidence            35566677777 88999999999999999999999999996     4569999   999999999999999998    55


Q ss_pred             CC-CCcccccccccCceeeCCCcccccccccccccCCCCCC
Q psy11590        259 KS-NPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNC  298 (555)
Q Consensus       259 ~~-~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  298 (555)
                      +. .+............-+|..|.+.|.....+..++..+.
T Consensus       693 ~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~  733 (958)
T KOG1074|consen  693 GGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQP  733 (958)
T ss_pred             CCCCCCCcccccccchhcccchhhhcccccccchhhhhccC
Confidence            22 22111111111122579999999988888877766553

>KOG3608|consensus

Probab=99.93  E-value=1.6e-25  Score=204.84  Aligned_cols=295  Identities=23%  Similarity=0.473  Sum_probs=207.4

Q ss_pred             cccCC--CCCCChhhHHHH-HHHHHHHHHhhcccc--------------ccccccccccccccccccCCCCcccC--CCC
Q psy11590         99 DFVCN--LCPPDSKIMIKY-AHLLVRHMKQCHTMQ--------------VHIPAVYKNFRSVTSFTMNNITQYKC--PDC  159 (555)
Q Consensus        99 ~~~C~--~C~~~~~~~f~~-~~~l~~H~~~~H~~~--------------~~c~~c~~~~~~~~~~~~~~~~~~~C--~~C  159 (555)
                      .+.|.  .|++.    ..+ ...|.+|.-. |--.              ...+.|.-.|.....+...+. .|.|  ..|
T Consensus        69 e~qC~w~~C~f~----~~~~s~~l~RHvy~-H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~-~f~C~WedC  142 (467)
T KOG3608|consen   69 EHQCTWNSCDFR----TENSSADLIRHVYF-HCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQ-NFRCGWEDC  142 (467)
T ss_pred             ceeEEeccCCcc----ccchHHHHHhhhhh-hhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchh-hhccChhhc
Confidence            36663  57765    433 4567777655 3100              034555555655554443332 4666  669


Q ss_pred             hhhcCChHHHHHHHHhccCCCccccCCccchhhhhhccccCCc-eeec--CccCccccchhhhhhhhhhcC-CCcccCCC
Q psy11590        160 PAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEK-KYIC--EVCGTSFLTWSSLNSHKYSHD-DRKFSCSH  235 (555)
Q Consensus       160 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~~l~~H~~~h~~~~~-~~~C--~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~  235 (555)
                      +..|.+...|..|+..|..--.|.         -..+- .+++ .+.|  ..|.+.|.+++.|++|++.|. ++...|+.
T Consensus       143 e~~F~s~~ef~dHV~~H~l~ceyd---------~~~~~-~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~  212 (467)
T KOG3608|consen  143 EREFVSIVEFQDHVVKHALFCEYD---------IQKTP-EDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPH  212 (467)
T ss_pred             CCcccCHHHHHHHHHHhhhhhhhh---------hhhCC-CCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecch
Confidence            999999999999998775321111         00111 2222 2445  458888888888888888887 77888888


Q ss_pred             CCccCCCchHHHhHHHhhcCCCCCCCCcccccccccCceeeCCCcccccccccccccCCCCCCcccccccccchhhcccc
Q psy11590        236 CGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQH  315 (555)
Q Consensus       236 C~~~f~~~~~L~~H~~~~H~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~c~~~~~~~~~~~~l~~h  315 (555)
                      ||.-|.++..|-.|++..    +..          ...+|+|                                      
T Consensus       213 Cg~~F~~~tkl~DH~rRq----t~l----------~~n~fqC--------------------------------------  240 (467)
T KOG3608|consen  213 CGELFRTKTKLFDHLRRQ----TEL----------NTNSFQC--------------------------------------  240 (467)
T ss_pred             HHHHhccccHHHHHHHhh----hhh----------cCCchHH--------------------------------------
Confidence            888888888888887751    110          0011444                                      


Q ss_pred             ccccccCccCccccChhHHhHHHHhhhcccccccCCCCchhhhhHHHHhhhhHhHHHHHHhhhcCCcceecCCCcccccC
Q psy11590        316 MECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKT  395 (555)
Q Consensus       316 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~c~~~~~~~l~~~~~~~~~~~~~~~C~~C~~~f~~  395 (555)
                            ..|.+.|.+...|..|+ ..|.+                                      -|+|+.|+.+.+.
T Consensus       241 ------~~C~KrFaTeklL~~Hv-~rHvn--------------------------------------~ykCplCdmtc~~  275 (467)
T KOG3608|consen  241 ------AQCFKRFATEKLLKSHV-VRHVN--------------------------------------CYKCPLCDMTCSS  275 (467)
T ss_pred             ------HHHHHHHhHHHHHHHHH-HHhhh--------------------------------------cccccccccCCCC
Confidence                  44444455555565555 33432                                      3899999999999


Q ss_pred             HHHHHHHHhh-ccCCCccccccccccccCHHHHHHHHHhcCCCCccCCC--ChhhcCChHHHHHHHhhhcCCC-cccccc
Q psy11590        396 FWTLKEHFNI-HTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDF--CEKVYSHRNRLRYHISTVHENK-WKSAAC  471 (555)
Q Consensus       396 ~~~L~~H~~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~-~~~~~C  471 (555)
                      .+.|.+|++. |...+||+|+.|++.|.+.+.|..|+.+|++..|.|..  |...|.+...|++|++.+|.+. .-+|.|
T Consensus       276 ~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~C  355 (467)
T KOG3608|consen  276 ASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYAC  355 (467)
T ss_pred             hHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceee
Confidence            9999999875 78899999999999999999999999999987999977  9999999999999999999554 356999


Q ss_pred             ccchhcccCchHHHHHHH-hc-----CCCCCeecccccccc
Q psy11590        472 DICGRVFLDSKNMKKHAA-VH-----STERPFVCKLCGIAY  506 (555)
Q Consensus       472 ~~C~k~f~~~~~L~~H~~-~H-----~~~~~~~C~~C~~~f  506 (555)
                      ..|++.|.+..+|.+|++ .|     .|-+.|.=.+|.-+|
T Consensus       356 H~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~  396 (467)
T KOG3608|consen  356 HCCDRFFTSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGF  396 (467)
T ss_pred             ecchhhhccchhHHHHHHHhhcccCCCCCCceeeeeccCce
Confidence            999999999999999964 45     344556656665555

>KOG2462|consensus

Probab=99.92  E-value=7.9e-26  Score=202.50  Aligned_cols=132  Identities=30%  Similarity=0.592  Sum_probs=118.7

Q ss_pred             CCccccccccccccCHHHHHHHHHhcCCC----CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHH
Q psy11590        409 EKKYVCELCGAYFIHKSSLVAHTTTHSNV----KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNM  484 (555)
Q Consensus       409 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~----~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L  484 (555)
                      ...|+|+.||+.+.+..+|.+|.++|-..    .+.|++|+++|.+..+|+.|+++ |+   -+.+|.+|||.|.....|
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirT-H~---l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRT-HT---LPCECGICGKAFSRPWLL  203 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhc-cC---CCcccccccccccchHHh
Confidence            45699999999999999999999999643    79999999999999999999999 66   469999999999999999


Q ss_pred             HHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccCCCC--ccccccceeee
Q psy11590        485 KKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTSPL--SVKFAMPHTRF  544 (555)
Q Consensus       485 ~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~--~~~~~~~~~~~  544 (555)
                      +.|+|+||||+||.|+.|++.|..++||+.||.+|.+.|+|.|..|.=.  -+-.+.+|.+.
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999999999999999999999999999999999999999999632  22333466554

>KOG3608|consensus

Probab=99.91  E-value=4.1e-24  Score=195.58  Aligned_cols=260  Identities=21%  Similarity=0.353  Sum_probs=196.5

Q ss_pred             eeec--CccCccccc-hhhhhhhhhhcC-----------------------------------CCcccCC--CCCccCCC
Q psy11590        203 KYIC--EVCGTSFLT-WSSLNSHKYSHD-----------------------------------DRKFSCS--HCGNSYKN  242 (555)
Q Consensus       203 ~~~C--~~C~~~f~~-~~~L~~H~~~h~-----------------------------------~~~~~C~--~C~~~f~~  242 (555)
                      .++|  ..|++...+ ..+|.+|...|.                                   ...|.|.  .|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            3555  457777666 478999976651                                   1127885  59999999


Q ss_pred             chHHHhHHHhhcCCCCCCCCc-ccccccccCceeeCCC--cccccccccccccCCCCCCcccccccccchhhcccccccc
Q psy11590        243 PIFLKRHFRESHLKHSKSNPE-QYAVKSLQDIMYWCNV--CSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECH  319 (555)
Q Consensus       243 ~~~L~~H~~~~H~~h~~~~~~-~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~c~~~~~~~~~~~~l~~h~~~~  319 (555)
                      ..++..|+..    |..--.. +..++.++...+.|.+  |.+.|.+++.|+.|.+.|.                ..++.
T Consensus       149 ~~ef~dHV~~----H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs----------------~eKvv  208 (467)
T KOG3608|consen  149 IVEFQDHVVK----HALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHS----------------NEKVV  208 (467)
T ss_pred             HHHHHHHHHH----hhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcC----------------CCeEE
Confidence            9999999986    3322111 1112222223466654  7777777775555544432                11223


Q ss_pred             ccCccCccccChhHHhHHHHhhhcccccccCCCCchhhhhHHHHhhhhHhHHHHHHhhhcCCcceecCCCcccccCHHHH
Q psy11590        320 TCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTL  399 (555)
Q Consensus       320 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~c~~~~~~~l~~~~~~~~~~~~~~~C~~C~~~f~~~~~L  399 (555)
                      .|+.||.-|.+...|.+|+...-                                   .....+|+|..|.|.|.++..|
T Consensus       209 ACp~Cg~~F~~~tkl~DH~rRqt-----------------------------------~l~~n~fqC~~C~KrFaTeklL  253 (467)
T KOG3608|consen  209 ACPHCGELFRTKTKLFDHLRRQT-----------------------------------ELNTNSFQCAQCFKRFATEKLL  253 (467)
T ss_pred             ecchHHHHhccccHHHHHHHhhh-----------------------------------hhcCCchHHHHHHHHHhHHHHH
Confidence            38888888888888877764321                                   1223479999999999999999


Q ss_pred             HHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC--CccCCCChhhcCChHHHHHHHhhhcCCCcccccccc--ch
Q psy11590        400 KEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV--KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDI--CG  475 (555)
Q Consensus       400 ~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~--~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~--C~  475 (555)
                      ..|+..|.  .-|+|+.|+.+....++|..|++..+.+  ||+|+.|++.|.+...|.+|+.. |..  ..|.|+.  |.
T Consensus       254 ~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~-HS~--~~y~C~h~~C~  328 (467)
T KOG3608|consen  254 KSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV-HSK--TVYQCEHPDCH  328 (467)
T ss_pred             HHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHh-ccc--cceecCCCCCc
Confidence            99999886  5699999999999999999999875543  99999999999999999999997 774  6799998  99


Q ss_pred             hcccCchHHHHHHHhcC-C--CCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        476 RVFLDSKNMKKHAAVHS-T--ERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       476 k~f~~~~~L~~H~~~H~-~--~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      .+|.+...|++|++.++ |  +.+|.|-.|++.|++..+|..|++.-|+-
T Consensus       329 ~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  329 YSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcc
Confidence            99999999999998765 4  45699999999999999999997766554

>KOG3623|consensus

Probab=99.87  E-value=2.3e-23  Score=207.08  Aligned_cols=117  Identities=20%  Similarity=0.402  Sum_probs=85.9

Q ss_pred             eeecCccCccccchhhhhhhhhhcC---CCcccCCCCCccCCCchHHHhHHHhhcCCCCCCCCcc-cccccccCceeeCC
Q psy11590        203 KYICEVCGTSFLTWSSLNSHKYSHD---DRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQ-YAVKSLQDIMYWCN  278 (555)
Q Consensus       203 ~~~C~~C~~~f~~~~~L~~H~~~h~---~~~~~C~~C~~~f~~~~~L~~H~~~~H~~h~~~~~~~-~~~~~~~~~~~~C~  278 (555)
                      ..+|++|++.+.....|+.|++.-+   +..|.|.+|.++|..+..|.+||.+    |....+.. ....+...+.|+|.
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~----hkpg~dqa~sltqsa~lRKFKCt  285 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQL----HKPGGDQAISLTQSALLRKFKCT  285 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHh----hcCCCcccccccchhhhcccccc
Confidence            3789999999999999999987654   6679999999999999999999998    54443321 11122223335555


Q ss_pred             CcccccccccccccCCCCCCcccccccccchhhccccccccccCccCccccChhHHhHHHHhhhcccccccCCCCchhhh
Q psy11590        279 VCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKI  358 (555)
Q Consensus       279 ~C~~~f~~~~~l~~H~~~~~c~~~~~~~~~~~~l~~h~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~  358 (555)
                      +|++.|..+.                                            .|     .+                 
T Consensus       286 ECgKAFKfKH--------------------------------------------HL-----KE-----------------  299 (1007)
T KOG3623|consen  286 ECGKAFKFKH--------------------------------------------HL-----KE-----------------  299 (1007)
T ss_pred             ccchhhhhHH--------------------------------------------HH-----Hh-----------------
Confidence            5555544333                                            33     33                 


Q ss_pred             hHHHHhhhhHhHHHHHHhhhcCCcceecCCCcccccCHHHHHHHHh
Q psy11590        359 SKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFN  404 (555)
Q Consensus       359 ~~~c~~~~~~~l~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~  404 (555)
                                     |.++|.|++||.|+.|+|+|.....+..||.
T Consensus       300 ---------------HlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  300 ---------------HLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             ---------------hheeecCCCCcCCcccccccccCCccccccc
Confidence                           4456677888999999999999999999985

>KOG3623|consensus

Probab=99.82  E-value=4.5e-21  Score=190.90  Aligned_cols=109  Identities=31%  Similarity=0.601  Sum_probs=96.0

Q ss_pred             cccCCCChhhcCChHHHHHHHHhccCCCccccCCccchhhhhhccccCCceeecCccCccccchhhhhhhhhhcC-----
Q psy11590        153 QYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHD-----  227 (555)
Q Consensus       153 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-----  227 (555)
                      ...|+.|...+.....|+.|++--+                .    ..+..|.|..|..+|..+..|.+|+.+|.     
T Consensus       210 lltcpycdrgykrltslkeHikyrh----------------e----kne~nfsC~lCsytFAyRtQLErhm~~hkpg~dq  269 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRH----------------E----KNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQ  269 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHH----------------h----hCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcc
Confidence            4689999999999999999997321                1    34567899999999999999999999884     


Q ss_pred             ---------CCcccCCCCCccCCCchHHHhHHHhhcCCCCCCCCcccccccccCceeeCCCcccccccccccccCCCCC
Q psy11590        228 ---------DRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSN  297 (555)
Q Consensus       228 ---------~~~~~C~~C~~~f~~~~~L~~H~~~~H~~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  297 (555)
                               .+.|+|..|+|.|..+..|+.|+|+    |.|++|            |.|+.|.+.|..+.++..|+...
T Consensus       270 a~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRI----HSGEKP------------feCpnCkKRFSHSGSySSHmSSK  332 (1007)
T KOG3623|consen  270 AISLTQSALLRKFKCTECGKAFKFKHHLKEHLRI----HSGEKP------------FECPNCKKRFSHSGSYSSHMSSK  332 (1007)
T ss_pred             cccccchhhhccccccccchhhhhHHHHHhhhee----ecCCCC------------cCCcccccccccCCccccccccc
Confidence                     2569999999999999999999999    999999            99999999999999999997544

>KOG3576|consensus

Probab=99.66  E-value=3.6e-17  Score=138.88  Aligned_cols=125  Identities=26%  Similarity=0.501  Sum_probs=101.9

Q ss_pred             CcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHHHHh
Q psy11590        381 TMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHIS  459 (555)
Q Consensus       381 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~  459 (555)
                      ...|.|.+|++.|.-...|.+|++-|...+.|-|..||+.|.....|++|+++|++. ||+|..|+++|+.+-.|..|++
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            446999999999999999999999999999999999999999999999999999998 9999999999999999999999


Q ss_pred             hhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccc
Q psy11590        460 TVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAK  524 (555)
Q Consensus       460 ~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  524 (555)
                      .+|+.. ..|             ++     ....++.|.|+.||..-.....+..|++.||+..|
T Consensus       195 kvhgv~-~~y-------------ay-----kerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  195 KVHGVQ-HQY-------------AY-----KERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHcCch-HHH-------------HH-----HHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            999864 111             00     01234556666666666666666666666665544

>KOG3576|consensus

Probab=99.60  E-value=4e-16  Score=132.56  Aligned_cols=95  Identities=28%  Similarity=0.560  Sum_probs=85.7

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHH
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK  517 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  517 (555)
                      .|.|.+|++.|.....|.+|++- |... +.|.|..|||.|.....|++|+|+|+|.+||+|..|+++|+++-.|..|++
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kc-h~~v-kr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKC-HSDV-KRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhh-ccHH-HHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            68899999999999999999988 7776 899999999999999999999999999999999999999999999999998


Q ss_pred             hCCCc-----------cccCcccCCCCc
Q psy11590        518 NCKAS-----------AKCSLMTTSPLS  534 (555)
Q Consensus       518 ~h~~~-----------~~~~~~~~~~~~  534 (555)
                      .-||.           |-|.|.+|.+-+
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~  222 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTS  222 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCC
Confidence            77764           456799998875

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.08  E-value=1.5e-10  Score=117.97  Aligned_cols=102  Identities=21%  Similarity=0.473  Sum_probs=69.0

Q ss_pred             cccccccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccC----------c
Q psy11590        412 YVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLD----------S  481 (555)
Q Consensus       412 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~----------~  481 (555)
                      +.|+.|++.|. ...|..|+..++ .++.|+ |++.+ .+..|..|+.+ |... +++.|.+|++.|..          .
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~~~H-kpv~Cp-Cg~~~-~R~~L~~H~~t-hCp~-Kpi~C~fC~~~v~~g~~~~d~~d~~  527 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMKVFH-EPLQCP-CGVVL-EKEQMVQHQAS-TCPL-RLITCRFCGDMVQAGGSAMDVRDRL  527 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHHhcC-CCccCC-CCCCc-chhHHHhhhhc-cCCC-CceeCCCCCCccccCccccchhhhh
Confidence            46777777774 566777777764 577777 77644 55777777766 5555 77777777777741          3


Q ss_pred             hHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCC
Q psy11590        482 KNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       482 ~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      +.|..|.... |.+++.|..||+.+..+ .|..|+...|.
T Consensus       528 s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        528 RGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             hhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHhhc
Confidence            4677777764 77777777777776544 56677665543

>PHA00733 hypothetical protein

Probab=99.02  E-value=2.6e-10  Score=94.81  Aligned_cols=53  Identities=23%  Similarity=0.454  Sum_probs=39.6

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      +||.|+.||+.|.+...|..|++.|  +.+|.|+.|++.|.....|..|+...|+
T Consensus        72 kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         72 SPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            6777777777777777777777765  3467777787777777777777777665

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.99  E-value=7.1e-10  Score=113.22  Aligned_cols=131  Identities=20%  Similarity=0.504  Sum_probs=105.1

Q ss_pred             eecCCCcccccCHHHHHHHHhhccCCCcccccc--ccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHHHHHhhh
Q psy11590        384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCEL--CGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTV  461 (555)
Q Consensus       384 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~~  461 (555)
                      -.|+.|....+. ..|..|..... ...-.|+.  |+..|. ...|..|        +.|+.|++.|. ...|..|+..+
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C~-r~~V~Cp~~~Cg~v~~-r~el~~H--------~~C~~Cgk~f~-~s~LekH~~~~  475 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYCS-RHNVVCPHDGCGIVLR-VEEAKNH--------VHCEKCGQAFQ-QGEMEKHMKVF  475 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhCC-CcceeCCcccccceee-ccccccC--------ccCCCCCCccc-hHHHHHHHHhc
Confidence            579999887654 55778875543 23456874  999993 3344444        69999999996 68899999995


Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccC----------hhhHHHHHHhCCCccccCcccCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKW----------RKNLVRHQKNCKASAKCSLMTTS  531 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~----------~~~L~~H~~~h~~~~~~~~~~~~  531 (555)
                      |    +++.|+ ||+.+ .+..|..|+.+|.+++|+.|+.|++.|..          .+.|..|...+ |.+++.|..|.
T Consensus       476 H----kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cg  548 (567)
T PLN03086        476 H----EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCG  548 (567)
T ss_pred             C----CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccC
Confidence            4    689999 99765 67999999999999999999999999952          45899999997 99999999996


Q ss_pred             CC
Q psy11590        532 PL  533 (555)
Q Consensus       532 ~~  533 (555)
                      -.
T Consensus       549 k~  550 (567)
T PLN03086        549 RS  550 (567)
T ss_pred             Ce
Confidence            43

>PHA00733 hypothetical protein

Probab=98.90  E-value=1.3e-09  Score=90.55  Aligned_cols=81  Identities=22%  Similarity=0.311  Sum_probs=40.5

Q ss_pred             CcceecCCCcccccCHHHHHHH--Hh---hccCCCccccccccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHH
Q psy11590        381 TMRYQCPHCPSLLKTFWTLKEH--FN---IHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLR  455 (555)
Q Consensus       381 ~~~~~C~~C~~~f~~~~~L~~H--~~---~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~  455 (555)
                      .+++.|.+|...|.....|..+  ++   .+.+.+||.|+.|++.|.+...|..|+..| ..+|.|+.|++.|.....|.
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCHHHHH
Confidence            4456666666666655555444  11   122344555555555555555555555443 12455555555555555555


Q ss_pred             HHHhhhc
Q psy11590        456 YHISTVH  462 (555)
Q Consensus       456 ~H~~~~H  462 (555)
                      .|+...|
T Consensus       117 ~H~~~~h  123 (128)
T PHA00733        117 DHVCKKH  123 (128)
T ss_pred             HHHHHhc
Confidence            5554433

>PHA02768 hypothetical protein; Provisional

Probab=98.85  E-value=1e-09  Score=74.15  Aligned_cols=44  Identities=20%  Similarity=0.438  Sum_probs=35.8

Q ss_pred             ccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHH
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLV  513 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  513 (555)
                      -|.|+.||+.|...++|..|+++|+  +||+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3788888888888888888888887  6888888888888777653

>KOG3993|consensus

Probab=98.65  E-value=5.3e-09  Score=99.59  Aligned_cols=140  Identities=23%  Similarity=0.376  Sum_probs=92.7

Q ss_pred             eecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCC---------------------------
Q psy11590        384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSN---------------------------  436 (555)
Q Consensus       384 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~---------------------------  436 (555)
                      |.|..|...|.+...|.+|.-.---.-.|+|+.|++.|.-..+|..|.++|..                           
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            66666666666666666664211111236666666666666666666666620                           


Q ss_pred             -------CCccCCCChhhcCChHHHHHHHhhhcCCCc-------------------------------------------
Q psy11590        437 -------VKFKCDFCEKVYSHRNRLRYHISTVHENKW-------------------------------------------  466 (555)
Q Consensus       437 -------~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~-------------------------------------------  466 (555)
                             ..|.|.+|++.|.....|++|..++|....                                           
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~s  427 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGS  427 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeecc
Confidence                   037788888888888888888777552110                                           


Q ss_pred             -cccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        467 -KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       467 -~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                       ..-.|++||-.+.++..--.+.+.-..+..|.|.+|...|.+..+|.+|+..+|...
T Consensus       428 ael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  428 AELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             ccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence             112477777777766665556555556677999999999999999999998877543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.63  E-value=2.1e-08  Score=57.87  Aligned_cols=26  Identities=31%  Similarity=0.897  Sum_probs=23.1

Q ss_pred             HHHHHHHhcCCCCCeecccccccccC
Q psy11590        483 NMKKHAAVHSTERPFVCKLCGIAYKW  508 (555)
Q Consensus       483 ~L~~H~~~H~~~~~~~C~~C~~~f~~  508 (555)
                      +|..|+++|+|++||+|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58899999999999999999999863

...

>PHA02768 hypothetical protein; Provisional

Probab=98.58  E-value=2.3e-08  Score=67.70  Aligned_cols=42  Identities=17%  Similarity=0.403  Sum_probs=26.1

Q ss_pred             eecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHH
Q psy11590        384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSL  427 (555)
Q Consensus       384 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L  427 (555)
                      |.|+.||+.|.....|..|+++|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            566666666666666666666665  466666666666555443

>KOG3993|consensus

Probab=98.55  E-value=2.2e-08  Score=95.45  Aligned_cols=181  Identities=15%  Similarity=0.218  Sum_probs=119.6

Q ss_pred             CCCCCccchhhccChhhHHhhhhhhhcCCcccCCCCCCChhhHHHHHHHHHHHHHhhcccccccccccc-----cccc--
Q psy11590         70 KCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYK-----NFRS--  142 (555)
Q Consensus        70 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~f~~~~~l~~H~~~~H~~~~~c~~c~~-----~~~~--  142 (555)
                      ..|.|..|...|.+...|.+|.-..--...|+|+.|++.    |.-..+|..|.|. |.....-..-+-     ...+  
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KV----FsCPANLASHRRW-HKPR~eaa~a~~~P~k~~~~~ra  340 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKV----FSCPANLASHRRW-HKPRPEAAKAGSPPPKQAVETRA  340 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCccccc----ccCchhhhhhhcc-cCCchhhhhcCCCChhhhhhhhh
Confidence            458999999999999999999743222235999999999    9999999999999 754431110000     0000  


Q ss_pred             -cccc----ccCCCCcccCCCChhhcCChHHHHHHHHhccCCCc--------cccC------Cccchhhhhhccc-----
Q psy11590        143 -VTSF----TMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKD--------FSCH------INSNLSEHIRMHH-----  198 (555)
Q Consensus       143 -~~~~----~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--------~~C~------~~~~l~~H~~~h~-----  198 (555)
                       ....    .......|.|.+|++.|.+...|+.|+.+|.....        +.-.      ....+..|...-+     
T Consensus       341 e~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~  420 (500)
T KOG3993|consen  341 EVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDE  420 (500)
T ss_pred             hhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccc
Confidence             0000    00234589999999999999999999988763211        1100      1111222221110     


Q ss_pred             -----cCCceeecCccCccccchhhhhhhhhhcC-CCcccCCCCCccCCCchHHHhHHHhhcC
Q psy11590        199 -----TEEKKYICEVCGTSFLTWSSLNSHKYSHD-DRKFSCSHCGNSYKNPIFLKRHFRESHL  255 (555)
Q Consensus       199 -----~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~  255 (555)
                           .......|++|+..+.++..--.+.+.-. +..|.|.+|..+|.+...|.+|+...|+
T Consensus       421 vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  421 VLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             eeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence                 11122458888888877766666655444 6679999999999999999999998764

>PHA00616 hypothetical protein

Probab=98.40  E-value=1.1e-07  Score=61.14  Aligned_cols=34  Identities=18%  Similarity=0.347  Sum_probs=19.8

Q ss_pred             ccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      ||+|..||+.|..++.|..|++.|+|+++|.|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            4556666666666666666665555555555554

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.39  E-value=1.8e-07  Score=54.04  Aligned_cols=26  Identities=42%  Similarity=0.888  Sum_probs=21.5

Q ss_pred             HHHHHHhhccCCCccccccccccccC
Q psy11590        398 TLKEHFNIHTSEKKYVCELCGAYFIH  423 (555)
Q Consensus       398 ~L~~H~~~H~~~~~~~C~~C~~~f~~  423 (555)
                      +|.+|+++|+|++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47888888888888888888888853

...

>PHA00616 hypothetical protein

Probab=98.31  E-value=2.7e-07  Score=59.34  Aligned_cols=33  Identities=21%  Similarity=0.467  Sum_probs=27.4

Q ss_pred             CeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      ||+|+.||+.|..+++|..|++.|||++|+.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            678888888888888888888888888887765

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.20  E-value=2.2e-06  Score=59.66  Aligned_cols=50  Identities=26%  Similarity=0.525  Sum_probs=28.3

Q ss_pred             ccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhc
Q psy11590        439 FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVH  491 (555)
Q Consensus       439 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H  491 (555)
                      |.||+|++ .-+...|..|+...|..+.+.+.|++|...+.  .+|..|+..+
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            56666666 34455666666666655545566666665433  2555555443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.14  E-value=1.5e-06  Score=65.21  Aligned_cols=36  Identities=31%  Similarity=0.654  Sum_probs=16.5

Q ss_pred             cccccchhcccCchHHHHHHHh-cCCCCCeeccccccccc
Q psy11590        469 AACDICGRVFLDSKNMKKHAAV-HSTERPFVCKLCGIAYK  507 (555)
Q Consensus       469 ~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C~~~f~  507 (555)
                      |.|+.||+.|.+...|..|++. |.+   +.|+.||+.|.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~   38 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR   38 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC
Confidence            4444455555444445544442 321   34555555444

>KOG1146|consensus

Probab=98.09  E-value=1.2e-05  Score=88.16  Aligned_cols=148  Identities=19%  Similarity=0.187  Sum_probs=93.2

Q ss_pred             CCccchhhccChhhHHhhhhh-hhcCCcccCCCCCCChhhHHHHHHHHHHHHHhhccccccccccccccccccccc----
Q psy11590         73 SCQKCEESFDNCNNLWSHMFI-KHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFT----  147 (555)
Q Consensus        73 ~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~~~~~f~~~~~l~~H~~~~H~~~~~c~~c~~~~~~~~~~~----  147 (555)
                      .|..|+..+.+...+..|+.. +.-.+.|+|+.|++.    ++....|..|||..|..... ..|.-.-.......    
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~----yk~a~~L~vhmRskhp~~~~-~~c~~gq~~~~~arg~~~  512 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWH----YKLAQTLGVHMRSKHPESQS-AYCKAGQNHPRLARGEVY  512 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeecccccccCCccchh----hhhHHHhhhcccccccccch-hHhHhccccccccccccc
Confidence            366777888888888888765 444578999999999    99999999999997744332 22221111111111    


Q ss_pred             cCCCCcccCCCChhhcCChHHHHHHHHh--ccCC----------Ccc-----ccC---Cccchhhhhhcc-ccCCceeec
Q psy11590        148 MNNITQYKCPDCPAILQTFKNLKCHLDI--HSGE----------KDF-----SCH---INSNLSEHIRMH-HTEEKKYIC  206 (555)
Q Consensus       148 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~----------~~~-----~C~---~~~~l~~H~~~h-~~~~~~~~C  206 (555)
                      ..+.++|.|..|...++.+.+|.+|++.  |..+          ...     .+.   ..+.+..-.-.- ...+..|.|
T Consensus       513 ~~~~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C  592 (1406)
T KOG1146|consen  513 RCPGKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRC  592 (1406)
T ss_pred             cCCCCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcch
Confidence            1346789999999999999999999974  3211          000     010   000000000000 011234889


Q ss_pred             CccCccccchhhhhhhhhh
Q psy11590        207 EVCGTSFLTWSSLNSHKYS  225 (555)
Q Consensus       207 ~~C~~~f~~~~~L~~H~~~  225 (555)
                      .+|+..-+-...|+.||..
T Consensus       593 ~vc~yetniarnlrihmts  611 (1406)
T KOG1146|consen  593 EVCSYETNIARNLRIHMTA  611 (1406)
T ss_pred             hhhcchhhhhhcccccccc
Confidence            9999988888888888753

>PHA00732 hypothetical protein

Probab=98.03  E-value=3.3e-06  Score=63.33  Aligned_cols=45  Identities=22%  Similarity=0.506  Sum_probs=21.1

Q ss_pred             ccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHh
Q psy11590        439 FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAV  490 (555)
Q Consensus       439 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~  490 (555)
                      |.|+.|++.|.+...|+.|++.+|.    ++.|+.||+.|.   .|..|+++
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~----~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT----LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC----CCccCCCCCEeC---Chhhhhcc
Confidence            4455555555555555555543232    134555555554   34445433

>KOG1146|consensus

Probab=97.97  E-value=5.5e-06  Score=90.60  Aligned_cols=77  Identities=13%  Similarity=0.245  Sum_probs=63.4

Q ss_pred             ccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhc-----------------CCCCCeeccc
Q psy11590        439 FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVH-----------------STERPFVCKL  501 (555)
Q Consensus       439 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H-----------------~~~~~~~C~~  501 (555)
                      +.|..|+..|.....+. |+-.     ..+|.|..|...|.....|..|.+.-                 ..-.+| |..
T Consensus      1261 ~~c~~~~~~~~~~~~~~-~l~~-----~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~ 1333 (1406)
T KOG1146|consen 1261 GECGAVDELLTPSFGIS-TLDV-----THRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLA 1333 (1406)
T ss_pred             chhhhccccccCcccee-eccc-----chhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chH
Confidence            89999999999988887 6544     16799999999999999999998532                 122346 999


Q ss_pred             ccccccChhhHHHHHHhCCCc
Q psy11590        502 CGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       502 C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      |...|..+..|..||+.-++.
T Consensus      1334 c~~~~~~~~alqihm~~~~~~ 1354 (1406)
T KOG1146|consen 1334 CEVLLSGREALQIHMRSSAHR 1354 (1406)
T ss_pred             HHhhcchhHHHHHHHHHhhhc
Confidence            999999999999999975544

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.79  E-value=2.6e-05  Score=54.29  Aligned_cols=51  Identities=27%  Similarity=0.621  Sum_probs=41.2

Q ss_pred             ccccccchhcccCchHHHHHHH-hcCCC-CCeecccccccccChhhHHHHHHhCCC
Q psy11590        468 SAACDICGRVFLDSKNMKKHAA-VHSTE-RPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      .|.|++|++ ..+...|..|.. .|.++ +.+.|++|...+.  .+|..|+..+|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            489999999 556789999965 56554 4699999998755  599999998774

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.69  E-value=2e-05  Score=44.10  Aligned_cols=22  Identities=32%  Similarity=0.874  Sum_probs=13.3

Q ss_pred             eecccccccccChhhHHHHHHh
Q psy11590        497 FVCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       497 ~~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      |.|++|++.|.++.+|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.63  E-value=3.3e-05  Score=62.01  Aligned_cols=73  Identities=19%  Similarity=0.441  Sum_probs=19.0

Q ss_pred             cCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhC
Q psy11590        440 KCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       440 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      +|..|+..|.+...|..|+...|+.. -+     ....+.....|..+++.- ....+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~-~~-----~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD-IP-----DQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccc-cc-----cccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            47778888888888888877766543 11     112222344444443322 122678888888888888888888864

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.61  E-value=2.8e-05  Score=43.49  Aligned_cols=22  Identities=36%  Similarity=0.800  Sum_probs=12.2

Q ss_pred             cccccchhcccCchHHHHHHHh
Q psy11590        469 AACDICGRVFLDSKNMKKHAAV  490 (555)
Q Consensus       469 ~~C~~C~k~f~~~~~L~~H~~~  490 (555)
                      |.|++|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4455555555555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.46  E-value=7.2e-05  Score=42.26  Aligned_cols=24  Identities=25%  Similarity=0.771  Sum_probs=13.3

Q ss_pred             eecccccccccChhhHHHHHHhCC
Q psy11590        497 FVCKLCGIAYKWRKNLVRHQKNCK  520 (555)
Q Consensus       497 ~~C~~C~~~f~~~~~L~~H~~~h~  520 (555)
                      |.|++|++.|.+...|+.|+++||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666543

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.44  E-value=9.3e-05  Score=43.22  Aligned_cols=26  Identities=27%  Similarity=0.622  Sum_probs=18.9

Q ss_pred             CeecccccccccChhhHHHHHHhCCC
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      ||+|..|++.|.+..+|..|++.|++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57777777777777777777777653

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.27  E-value=0.00016  Score=57.96  Aligned_cols=71  Identities=18%  Similarity=0.430  Sum_probs=12.4

Q ss_pred             cCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHHHHHhh
Q psy11590        386 CPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHIST  460 (555)
Q Consensus       386 C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~  460 (555)
                      |..|+..|.+...|..||...++...-    ....+.....+..++..-...++.|..|++.|.+...|..|++.
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             ---------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            555555565555565565443321100    11111122223333322222245555555555555555555554

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.20  E-value=0.00024  Score=40.01  Aligned_cols=21  Identities=33%  Similarity=0.836  Sum_probs=7.6

Q ss_pred             cCCCChhhcCChHHHHHHHhh
Q psy11590        440 KCDFCEKVYSHRNRLRYHIST  460 (555)
Q Consensus       440 ~C~~C~~~f~~~~~L~~H~~~  460 (555)
                      .|++|++.|.+...|+.|+++
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHHh
Confidence            344444444444444444333

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.20  E-value=0.00011  Score=68.04  Aligned_cols=27  Identities=37%  Similarity=0.838  Sum_probs=18.5

Q ss_pred             CCCccCCC--ChhhcCChHHHHHHHhhhc
Q psy11590        436 NVKFKCDF--CEKVYSHRNRLRYHISTVH  462 (555)
Q Consensus       436 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H  462 (555)
                      ++||+|++  |++.|+....|+.|+.-.|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH  375 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGH  375 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccc
Confidence            45777765  7777777777777776544

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.11  E-value=0.00022  Score=41.57  Aligned_cols=25  Identities=28%  Similarity=0.697  Sum_probs=15.7

Q ss_pred             ccccccchhcccCchHHHHHHHhcC
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHS  492 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~  492 (555)
                      ||.|+.|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666666553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.66  E-value=0.0013  Score=43.31  Aligned_cols=32  Identities=28%  Similarity=0.556  Sum_probs=16.8

Q ss_pred             CCCCeecccccccccChhhHHHHHHhCCCccc
Q psy11590        493 TERPFVCKLCGIAYKWRKNLVRHQKNCKASAK  524 (555)
Q Consensus       493 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  524 (555)
                      .+.|-.|++|+..+.+..+|++|+...|+.||
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34566666666666666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.55  E-value=0.0011  Score=43.65  Aligned_cols=41  Identities=24%  Similarity=0.602  Sum_probs=19.9

Q ss_pred             HHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCC
Q psy11590        455 RYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERP  496 (555)
Q Consensus       455 ~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  496 (555)
                      ..+.+.++..+ .|-.|++|+..+....+|++|+.++++.+|
T Consensus        12 ~~~~k~~~~S~-~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSE-QPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS---EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccC-CCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34444433333 667777777777777777777766666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.55  E-value=0.0019  Score=60.07  Aligned_cols=67  Identities=31%  Similarity=0.564  Sum_probs=50.3

Q ss_pred             CCcccCCC--CCccCCCchHHHhHHHhhcC---CCCCCCCcccccccccCceeeCCCcccccccccccccCC
Q psy11590        228 DRKFSCSH--CGNSYKNPIFLKRHFRESHL---KHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSIHR  294 (555)
Q Consensus       228 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~---~h~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  294 (555)
                      ++||+|++  |+|.|.+...|+-|+..-|.   .+....|+....=+..++||+|+.|++.+.....|+.|+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            58999987  99999999999999986552   122222322222345667899999999999999888885

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.44  E-value=0.0014  Score=36.86  Aligned_cols=24  Identities=29%  Similarity=0.612  Sum_probs=14.5

Q ss_pred             eecccccccccChhhHHHHHHhCCC
Q psy11590        497 FVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       497 ~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      |+|+.|++... ..+|..|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            56777776666 6677777766553

>smart00355 ZnF_C2H2 zinc finger

Probab=96.36  E-value=0.0025  Score=36.41  Aligned_cols=22  Identities=27%  Similarity=0.596  Sum_probs=10.8

Q ss_pred             ecccccccccChhhHHHHHHhC
Q psy11590        498 VCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       498 ~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      +|..|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4455555555555555554433

>smart00355 ZnF_C2H2 zinc finger

Probab=96.36  E-value=0.0028  Score=36.20  Aligned_cols=23  Identities=35%  Similarity=0.764  Sum_probs=13.2

Q ss_pred             cccccchhcccCchHHHHHHHhc
Q psy11590        469 AACDICGRVFLDSKNMKKHAAVH  491 (555)
Q Consensus       469 ~~C~~C~k~f~~~~~L~~H~~~H  491 (555)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            34555666666666666665544

>KOG2231|consensus

Probab=96.24  E-value=0.0073  Score=63.39  Aligned_cols=48  Identities=29%  Similarity=0.535  Sum_probs=40.5

Q ss_pred             eecCccCccccchhhhhhhhhhcCCCcccCCCC------CccCCCchHHHhHHHhhc
Q psy11590        204 YICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHC------GNSYKNPIFLKRHFRESH  254 (555)
Q Consensus       204 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C------~~~f~~~~~L~~H~~~~H  254 (555)
                      -.|..|...|.....|.+|++.++   |.|-.|      +..|.....|..|.+..|
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h---~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH---EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce---eheeecCcccccchhcccchHHHHHhhhcC
Confidence            469999999999999999999876   556665      456888899999999876

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.13  E-value=0.012  Score=55.38  Aligned_cols=101  Identities=30%  Similarity=0.519  Sum_probs=69.9

Q ss_pred             cccCCC--ChhhcCChHHHHHHHHhccC----------CCccccC----CccchhhhhhccccCCcee----ecCccCcc
Q psy11590        153 QYKCPD--CPAILQTFKNLKCHLDIHSG----------EKDFSCH----INSNLSEHIRMHHTEEKKY----ICEVCGTS  212 (555)
Q Consensus       153 ~~~C~~--C~~~f~~~~~l~~H~~~h~~----------~~~~~C~----~~~~l~~H~~~h~~~~~~~----~C~~C~~~  212 (555)
                      .|.|+.  |.........|..|.+.-++          .+.|.|.    ....|+.|...- ..+..|    .|..|...
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G-~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGG-LEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccCC-ccccCcCCCchhhhccce
Confidence            588976  88888889999999986432          3445554    466777776543 222233    58999999


Q ss_pred             ccchhhhhhhhhhcCCCcccCCCCC----ccCCCchHHHhHHHhhc
Q psy11590        213 FLTWSSLNSHKYSHDDRKFSCSHCG----NSYKNPIFLKRHFRESH  254 (555)
Q Consensus       213 f~~~~~L~~H~~~h~~~~~~C~~C~----~~f~~~~~L~~H~~~~H  254 (555)
                      |.+...|.+|++..+++-|.|+.=+    +-|.+..+|.+|.+..|
T Consensus       230 FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h  275 (493)
T COG5236         230 FYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAH  275 (493)
T ss_pred             ecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCc
Confidence            9999999999988776544444322    24778888888887643

>PRK04860 hypothetical protein; Provisional

Probab=96.11  E-value=0.0029  Score=54.76  Aligned_cols=40  Identities=20%  Similarity=0.536  Sum_probs=33.4

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChh
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRK  510 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~  510 (555)
                      -+|.|. |+.   ....+++|.++|+|+++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            468998 887   7788899999999999999999998886543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.79  E-value=0.005  Score=35.00  Aligned_cols=22  Identities=23%  Similarity=0.714  Sum_probs=13.5

Q ss_pred             eecccccccccChhhHHHHHHh
Q psy11590        497 FVCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       497 ~~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      |.|.+|++.|.+...|+.|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.68  E-value=0.0051  Score=34.95  Aligned_cols=22  Identities=27%  Similarity=0.709  Sum_probs=12.9

Q ss_pred             cccccchhcccCchHHHHHHHh
Q psy11590        469 AACDICGRVFLDSKNMKKHAAV  490 (555)
Q Consensus       469 ~~C~~C~k~f~~~~~L~~H~~~  490 (555)
                      |.|++|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.58  E-value=0.0098  Score=33.39  Aligned_cols=20  Identities=30%  Similarity=0.672  Sum_probs=7.3

Q ss_pred             cCCCChhhcCChHHHHHHHhh
Q psy11590        440 KCDFCEKVYSHRNRLRYHIST  460 (555)
Q Consensus       440 ~C~~C~~~f~~~~~L~~H~~~  460 (555)
                      +|+.|+.... ...|..|++.
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCcCC-HHHHHHHHHh
Confidence            3444444443 3344444443

>KOG2231|consensus

Probab=95.47  E-value=0.039  Score=58.10  Aligned_cols=110  Identities=21%  Similarity=0.378  Sum_probs=66.3

Q ss_pred             cccCccCccccChhHHhHHHHhhhcccccccCCCCchhhhhHHHHhhhhHhHHHHHHhhhcCCcceecCCCcccccCHHH
Q psy11590        319 HTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWT  398 (555)
Q Consensus       319 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~~~~~~~~c~~~~~~~l~~~~~~~~~~~~~~~C~~C~~~f~~~~~  398 (555)
                      ..|..| -.|.+...|.+|+...|.......            |-               .+.+  .+..+.+. .+...
T Consensus       116 ~~~~~c-~~~~s~~~Lk~H~~~~H~~~~c~l------------C~---------------~~~k--if~~e~k~-Yt~~e  164 (669)
T KOG2231|consen  116 KECLHC-TEFKSVENLKNHMRDQHKLHLCSL------------CL---------------QNLK--IFINERKL-YTRAE  164 (669)
T ss_pred             CCCccc-cchhHHHHHHHHHHHhhhhhcccc------------cc---------------ccce--eeeeeeeh-ehHHH
Confidence            348888 788888999999888886532110            00               0011  12222333 34566


Q ss_pred             HHHHHhhcc-CCCc----cccccccccccCHHHHHHHHHhcCCCCccCCCC------hhhcCChHHHHHHHhhhc
Q psy11590        399 LKEHFNIHT-SEKK----YVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFC------EKVYSHRNRLRYHISTVH  462 (555)
Q Consensus       399 L~~H~~~H~-~~~~----~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C------~~~f~~~~~L~~H~~~~H  462 (555)
                      |..|++.-- +++.    -.|..|...|.....|..|++.++   |.|..|      +.-|.....|..|.+..|
T Consensus       165 l~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h---~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  165 LNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH---EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             HHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccce---eheeecCcccccchhcccchHHHHHhhhcC
Confidence            777765421 1221    347788888888888888887665   344444      455777788888888844

>KOG2482|consensus

Probab=95.44  E-value=0.12  Score=48.95  Aligned_cols=65  Identities=20%  Similarity=0.417  Sum_probs=44.2

Q ss_pred             chhhhhhccccCCceeecCccCccccc-hhhhhhhhhh-cC---C-------------------CcccCCCCCccCCCch
Q psy11590        189 NLSEHIRMHHTEEKKYICEVCGTSFLT-WSSLNSHKYS-HD---D-------------------RKFSCSHCGNSYKNPI  244 (555)
Q Consensus       189 ~l~~H~~~h~~~~~~~~C~~C~~~f~~-~~~L~~H~~~-h~---~-------------------~~~~C~~C~~~f~~~~  244 (555)
                      .|.++++.........+|-.|+..+.. ++....|+.. |+   +                   ..+.|-.|.+.|+.+.
T Consensus       130 aLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkn  209 (423)
T KOG2482|consen  130 ALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKN  209 (423)
T ss_pred             HHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcH
Confidence            344555444233455789999877654 4555666542 32   1                   2389999999999999


Q ss_pred             HHHhHHHhh
Q psy11590        245 FLKRHFRES  253 (555)
Q Consensus       245 ~L~~H~~~~  253 (555)
                      .|+.||+..
T Consensus       210 tLkeHMrkK  218 (423)
T KOG2482|consen  210 TLKEHMRKK  218 (423)
T ss_pred             HHHHHHHhc
Confidence            999999863

>KOG2785|consensus

Probab=95.31  E-value=0.032  Score=53.93  Aligned_cols=136  Identities=16%  Similarity=0.277  Sum_probs=93.4

Q ss_pred             ceecCCCcccccCHHHHHHHHhh--cc-----------------------------------CCCccccccccccccCHH
Q psy11590        383 RYQCPHCPSLLKTFWTLKEHFNI--HT-----------------------------------SEKKYVCELCGAYFIHKS  425 (555)
Q Consensus       383 ~~~C~~C~~~f~~~~~L~~H~~~--H~-----------------------------------~~~~~~C~~C~~~f~~~~  425 (555)
                      .|.|.-|...|.+...-+.|+++  |.                                   ++-++.|.+|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            37899999999999888888863  42                                   234588999999999999


Q ss_pred             HHHHHHHhcCCC------------------Ccc-------------CCCChhhcCChHHHHHHHhhhc----------CC
Q psy11590        426 SLVAHTTTHSNV------------------KFK-------------CDFCEKVYSHRNRLRYHISTVH----------EN  464 (555)
Q Consensus       426 ~L~~H~~~H~~~------------------~~~-------------C~~C~~~f~~~~~L~~H~~~~H----------~~  464 (555)
                      +...|+..-...                  .+.             +..+...+........+...--          ..
T Consensus        83 a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~  162 (390)
T KOG2785|consen   83 AHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDED  162 (390)
T ss_pred             hHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchhc
Confidence            998887643110                  122             3333333333222222221100          00


Q ss_pred             CccccccccchhcccCchHHHHHHHhcCCC-----------------------CCeeccccc---ccccChhhHHHHHHh
Q psy11590        465 KWKSAACDICGRVFLDSKNMKKHAAVHSTE-----------------------RPFVCKLCG---IAYKWRKNLVRHQKN  518 (555)
Q Consensus       465 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~-----------------------~~~~C~~C~---~~f~~~~~L~~H~~~  518 (555)
                      +.-|-.|-+|++.+.+-..-..||..++|-                       .-|.|-.|+   +.|.+-...+.||..
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            113467999999999999999999888762                       238999999   999999999999974

>KOG2785|consensus

Probab=94.96  E-value=0.083  Score=51.16  Aligned_cols=172  Identities=17%  Similarity=0.188  Sum_probs=102.2

Q ss_pred             ccccCccCccccChhHHhHHHHhhhcccccccCCCC-chhhhhHHHHhhhhHhHHHHHHhhhcCCcceecCCCcccccCH
Q psy11590        318 CHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDD-SENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTF  396 (555)
Q Consensus       318 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~-~~~~~~~~c~~~~~~~l~~~~~~~~~~~~~~~C~~C~~~f~~~  396 (555)
                      .++|.-|...|.+...-+.|++..--+.-..-+... .+.......++....+... ....-.+..++.|..|.+.|.+.
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~-~~~~e~~~~~~~c~~c~k~~~s~   81 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEK-EENLEEAESVVYCEACNKSFASP   81 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhh-hhhhhhcccceehHHhhccccCh
Confidence            466999999999999998888765322111111111 1111111112211111111 11123456679999999999999


Q ss_pred             HHHHHHHhh--ccC---------C------Cccc-------------cccccccccCHHHHHHHHHhc--------C---
Q psy11590        397 WTLKEHFNI--HTS---------E------KKYV-------------CELCGAYFIHKSSLVAHTTTH--------S---  435 (555)
Q Consensus       397 ~~L~~H~~~--H~~---------~------~~~~-------------C~~C~~~f~~~~~L~~H~~~H--------~---  435 (555)
                      .....|+..  |..         +      ....             +..+...+........+...-        .   
T Consensus        82 ~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e  161 (390)
T KOG2785|consen   82 KAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDE  161 (390)
T ss_pred             hhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchh
Confidence            999999753  310         0      1111             333333333322222221110        0   


Q ss_pred             --CCCccCCCChhhcCChHHHHHHHhhhcCCCc---------------------cccccccch---hcccCchHHHHHHH
Q psy11590        436 --NVKFKCDFCEKVYSHRNRLRYHISTVHENKW---------------------KSAACDICG---RVFLDSKNMKKHAA  489 (555)
Q Consensus       436 --~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~---------------------~~~~C~~C~---k~f~~~~~L~~H~~  489 (555)
                        ..|-.|-.|++.+.+...-..||...|+.-+                     .-|.|-.|+   +.|.+..+.+.||.
T Consensus       162 ~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~  241 (390)
T KOG2785|consen  162 DELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMR  241 (390)
T ss_pred             cccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHh
Confidence              0167899999999999999999999886321                     237899998   99999999999996


Q ss_pred             h
Q psy11590        490 V  490 (555)
Q Consensus       490 ~  490 (555)
                      .
T Consensus       242 ~  242 (390)
T KOG2785|consen  242 D  242 (390)
T ss_pred             h
Confidence            4

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.87  E-value=0.0087  Score=34.73  Aligned_cols=22  Identities=27%  Similarity=0.617  Sum_probs=14.7

Q ss_pred             eecccccccccChhhHHHHHHh
Q psy11590        497 FVCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       497 ~~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      |.|.+|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5567777777777777666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.61  E-value=0.016  Score=33.66  Aligned_cols=22  Identities=32%  Similarity=0.596  Sum_probs=20.0

Q ss_pred             CCCccchhhccChhhHHhhhhh
Q psy11590         72 HSCQKCEESFDNCNNLWSHMFI   93 (555)
Q Consensus        72 ~~C~~C~~~f~~~~~l~~H~~~   93 (555)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.56  E-value=0.021  Score=49.47  Aligned_cols=39  Identities=28%  Similarity=0.702  Sum_probs=30.0

Q ss_pred             cceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCH
Q psy11590        382 MRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHK  424 (555)
Q Consensus       382 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~  424 (555)
                      -+|.|. |+.   ....+.+|.++|+++++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            358887 877   566778888888888888888888877543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.66  E-value=0.014  Score=60.79  Aligned_cols=151  Identities=20%  Similarity=0.279  Sum_probs=111.9

Q ss_pred             cceecCCCcccccCHHHHHHHHh--hccCC--Cccccc--cccccccCHHHHHHHHHhcCCC-CccCCC--ChhhcCChH
Q psy11590        382 MRYQCPHCPSLLKTFWTLKEHFN--IHTSE--KKYVCE--LCGAYFIHKSSLVAHTTTHSNV-KFKCDF--CEKVYSHRN  452 (555)
Q Consensus       382 ~~~~C~~C~~~f~~~~~L~~H~~--~H~~~--~~~~C~--~C~~~f~~~~~L~~H~~~H~~~-~~~C~~--C~~~f~~~~  452 (555)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...|.+. ++.+..  +...+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            46899999999999999999999  89999  999999  8999999999999999999887 455533  555544433


Q ss_pred             HHH----HHHhhhcCCCcccccccc--chhcccCchHHHHHHHhcCCCC--CeecccccccccChhhHHHHHHhCCCccc
Q psy11590        453 RLR----YHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTER--PFVCKLCGIAYKWRKNLVRHQKNCKASAK  524 (555)
Q Consensus       453 ~L~----~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  524 (555)
                      .-.    ..... -......+.+..  |-..+.....+..|...|...+  .+.+..|.+.|.....|..|++.+....+
T Consensus       368 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (467)
T COG5048         368 NNEPPQSLQQYK-DLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAP  446 (467)
T ss_pred             CCCCccchhhcc-CccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCc
Confidence            311    11111 111114455543  7777788888888887777666  46778899999999999999998888887


Q ss_pred             cCcccCCCC
Q psy11590        525 CSLMTTSPL  533 (555)
Q Consensus       525 ~~~~~~~~~  533 (555)
                      +.+......
T Consensus       447 ~~~~~~~~~  455 (467)
T COG5048         447 LLCSILKSF  455 (467)
T ss_pred             eeecccccc
Confidence            766555544

>KOG4173|consensus

Probab=93.57  E-value=0.038  Score=48.30  Aligned_cols=75  Identities=24%  Similarity=0.529  Sum_probs=38.3

Q ss_pred             cccccc--ccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHHHHHhhhcC---------CCcccccccc--chhc
Q psy11590        411 KYVCEL--CGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHE---------NKWKSAACDI--CGRV  477 (555)
Q Consensus       411 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~~H~---------~~~~~~~C~~--C~k~  477 (555)
                      .|.|++  |...|.....+..|..+-++  -.|.+|.+.|.+.-.|..|+..-|.         |. .-|+|-+  |+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~--~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~-dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHG--NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQ-DMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhccc--chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCc-cHHHHHHHhhhhh
Confidence            355554  55555555555555433222  2455666666666666665554441         11 3355533  5555


Q ss_pred             ccCchHHHHHH
Q psy11590        478 FLDSKNMKKHA  488 (555)
Q Consensus       478 f~~~~~L~~H~  488 (555)
                      |.+...-..|+
T Consensus       156 FkT~r~RkdH~  166 (253)
T KOG4173|consen  156 FKTSRDRKDHM  166 (253)
T ss_pred             hhhhhhhhhHH
Confidence            55555555554

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.20  E-value=0.11  Score=49.26  Aligned_cols=78  Identities=24%  Similarity=0.415  Sum_probs=57.5

Q ss_pred             CCccchhhccChhhHHhhhhhhhcCCcccCCCCCCChhhHHHHHHHHHHHHHhhccccccccccccccccccccccCCCC
Q psy11590         73 SCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPAVYKNFRSVTSFTMNNIT  152 (555)
Q Consensus        73 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~f~~~~~l~~H~~~~H~~~~~c~~c~~~~~~~~~~~~~~~~  152 (555)
                      .|..|...|.+-..|..|++..|. +-|.|+.=+......|++-..|..|.+..|                         
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE-~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h-------------------------  275 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHE-ACHICDMVGPIRYQYFKSYEDLEAHFRNAH-------------------------  275 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhh-hhhhhhccCccchhhhhCHHHHHHHhhcCc-------------------------
Confidence            499999999999999999998763 334444444446788999999999998755                         


Q ss_pred             cccCCC--C----hhhcCChHHHHHHHHhcc
Q psy11590        153 QYKCPD--C----PAILQTFKNLKCHLDIHS  177 (555)
Q Consensus       153 ~~~C~~--C----~~~f~~~~~l~~H~~~h~  177 (555)
                       |.|..  |    -.+|....+|..|+..-+
T Consensus       276 -y~ct~qtc~~~k~~vf~~~~el~~h~~~~h  305 (493)
T COG5236         276 -YCCTFQTCRVGKCYVFPYHTELLEHLTRFH  305 (493)
T ss_pred             -eEEEEEEEecCcEEEeccHHHHHHHHHHHh
Confidence             33321  2    157889999999986543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.78  E-value=0.13  Score=29.08  Aligned_cols=20  Identities=30%  Similarity=0.692  Sum_probs=11.1

Q ss_pred             ecccccccccChhhHHHHHHh
Q psy11590        498 VCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       498 ~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      .|+.||+.| ....|..|++.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            455666665 44555555544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.68  E-value=0.14  Score=31.68  Aligned_cols=23  Identities=30%  Similarity=0.654  Sum_probs=17.4

Q ss_pred             CeecccccccccChhhHHHHHHh
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      +|.|++|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888877778777653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2482|consensus

Probab=91.28  E-value=0.44  Score=45.33  Aligned_cols=124  Identities=17%  Similarity=0.352  Sum_probs=70.8

Q ss_pred             HHHHHHHHhhccC-CCccccccccccccC-HHHHHHHHH-hcC---CC-------------------CccCCCChhhcCC
Q psy11590        396 FWTLKEHFNIHTS-EKKYVCELCGAYFIH-KSSLVAHTT-THS---NV-------------------KFKCDFCEKVYSH  450 (555)
Q Consensus       396 ~~~L~~H~~~H~~-~~~~~C~~C~~~f~~-~~~L~~H~~-~H~---~~-------------------~~~C~~C~~~f~~  450 (555)
                      +..|.++++--.+ ....+|-.|...+.. .+.+..|+- +|.   |.                   .+.|-.|.+.|..
T Consensus       128 ~eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrd  207 (423)
T KOG2482|consen  128 KEALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRD  207 (423)
T ss_pred             HHHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCC
Confidence            3456666554332 345679999887654 445666653 332   11                   3889999999999


Q ss_pred             hHHHHHHHhhhcCCCccccccccchhcc------cCchHHHHH--H--Hhc---------------CCCCC--eeccccc
Q psy11590        451 RNRLRYHISTVHENKWKSAACDICGRVF------LDSKNMKKH--A--AVH---------------STERP--FVCKLCG  503 (555)
Q Consensus       451 ~~~L~~H~~~~H~~~~~~~~C~~C~k~f------~~~~~L~~H--~--~~H---------------~~~~~--~~C~~C~  503 (555)
                      +..|+.||+..-.....|-. ..=++.|      ..++-...|  .  .+-               .++.+  -+|-.|.
T Consensus       208 kntLkeHMrkK~HrrinPkn-reYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~  286 (423)
T KOG2482|consen  208 KNTLKEHMRKKRHRRINPKN-REYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCT  286 (423)
T ss_pred             cHHHHHHHHhccCcccCCCc-cccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeec
Confidence            99999999873322212200 0000000      001111111  1  110               12233  5899999


Q ss_pred             ccccChhhHHHHHHhCC
Q psy11590        504 IAYKWRKNLVRHQKNCK  520 (555)
Q Consensus       504 ~~f~~~~~L~~H~~~h~  520 (555)
                      ....+...|..||+.-|
T Consensus       287 ~~~en~~~l~eHmk~vH  303 (423)
T KOG2482|consen  287 NFYENPVFLFEHMKIVH  303 (423)
T ss_pred             cchhhHHHHHHHHHHHH
Confidence            99999999999999765

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.20  E-value=0.16  Score=28.80  Aligned_cols=19  Identities=42%  Similarity=1.041  Sum_probs=10.8

Q ss_pred             ccccchhcccCchHHHHHHH
Q psy11590        470 ACDICGRVFLDSKNMKKHAA  489 (555)
Q Consensus       470 ~C~~C~k~f~~~~~L~~H~~  489 (555)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            456666666 4555555543

>KOG2893|consensus

Probab=90.04  E-value=0.099  Score=46.82  Aligned_cols=41  Identities=22%  Similarity=0.593  Sum_probs=21.9

Q ss_pred             CCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHH
Q psy11590        441 CDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKH  487 (555)
Q Consensus       441 C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H  487 (555)
                      |=+|++.|....-|.+|.+.      +-|+|.+|.|...+-..|..|
T Consensus        13 cwycnrefddekiliqhqka------khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA------KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh------ccceeeeehhhhccCCCceee
Confidence            44555555555555555544      445555555555555555544

>KOG4173|consensus

Probab=89.40  E-value=0.22  Score=43.66  Aligned_cols=78  Identities=17%  Similarity=0.423  Sum_probs=46.5

Q ss_pred             ceecCC--CcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcC----------CC-CccCC--CChhh
Q psy11590        383 RYQCPH--CPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS----------NV-KFKCD--FCEKV  447 (555)
Q Consensus       383 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~----------~~-~~~C~--~C~~~  447 (555)
                      .+.|++  |...|.+......|..+-++.   .|..|.+.|.+...|..|+..-+          |. -|.|-  .|+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            466665  666666666666665443332   46777777777777777754221          22 36663  37777


Q ss_pred             cCChHHHHHHHhhhcC
Q psy11590        448 YSHRNRLRYHISTVHE  463 (555)
Q Consensus       448 f~~~~~L~~H~~~~H~  463 (555)
                      |.+...-..|+..-|.
T Consensus       156 FkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhHHHHhcc
Confidence            7777777777666554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.83  E-value=0.3  Score=30.15  Aligned_cols=23  Identities=17%  Similarity=0.590  Sum_probs=12.0

Q ss_pred             CccCCCChhhcCChHHHHHHHhh
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHIST  460 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~  460 (555)
                      +|.|++|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            34555555555555555555443

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=88.80  E-value=0.21  Score=30.48  Aligned_cols=11  Identities=27%  Similarity=0.978  Sum_probs=5.9

Q ss_pred             cccccchhccc
Q psy11590        469 AACDICGRVFL  479 (555)
Q Consensus       469 ~~C~~C~k~f~  479 (555)
                      |+|.+||..+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            45555655543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.41  E-value=0.16  Score=52.69  Aligned_cols=66  Identities=24%  Similarity=0.397  Sum_probs=50.3

Q ss_pred             ccccccchhcccCchHHHHHHH--hcCCC--CCeecc--cccccccChhhHHHHHHhCCCccccCcccCCCC
Q psy11590        468 SAACDICGRVFLDSKNMKKHAA--VHSTE--RPFVCK--LCGIAYKWRKNLVRHQKNCKASAKCSLMTTSPL  533 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~--~H~~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~  533 (555)
                      ++.|..|...|.....|..|.+  .|+++  +|+.|+  .|++.|.+...+..|..+|.+..++.+......
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSS  360 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCc
Confidence            5777888888888888888877  78888  788888  688888888888888888887777665544443

>KOG2893|consensus

Probab=86.50  E-value=0.19  Score=45.02  Aligned_cols=46  Identities=26%  Similarity=0.420  Sum_probs=39.9

Q ss_pred             ccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHH-HHhC
Q psy11590        470 ACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRH-QKNC  519 (555)
Q Consensus       470 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H-~~~h  519 (555)
                      -|-+|++.|.....|.+|.+    .+-|+|.+|.+...+.-.|..| |.+|
T Consensus        12 wcwycnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhh
Confidence            49999999999999999975    3569999999999999999988 4444

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.88  E-value=1.3  Score=35.83  Aligned_cols=25  Identities=20%  Similarity=0.547  Sum_probs=23.3

Q ss_pred             eec----ccccccccChhhHHHHHHhCCC
Q psy11590        497 FVC----KLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       497 ~~C----~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      |.|    ..|++...+...++.|++.+||
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            899    9999999999999999999886

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=82.86  E-value=1.9  Score=34.62  Aligned_cols=22  Identities=27%  Similarity=0.538  Sum_probs=15.0

Q ss_pred             CCccccccccccccCHHHHHHH
Q psy11590        409 EKKYVCELCGAYFIHKSSLVAH  430 (555)
Q Consensus       409 ~~~~~C~~C~~~f~~~~~L~~H  430 (555)
                      +-|..|++||-.......|.+-
T Consensus        13 ~LP~~CpiCgLtLVss~HLARS   34 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARS   34 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHh
Confidence            3567778887777776666653

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=81.90  E-value=0.8  Score=30.95  Aligned_cols=27  Identities=22%  Similarity=0.495  Sum_probs=22.4

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCC
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHEN  464 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  464 (555)
                      -+.||.|+..|.....+..|+...|+.
T Consensus        17 ~lrCPRC~~~FR~~K~Y~RHVNKaH~~   43 (65)
T COG4049          17 FLRCPRCGMVFRRRKDYIRHVNKAHGW   43 (65)
T ss_pred             eeeCCchhHHHHHhHHHHHHhhHHhhh
Confidence            578999999999998888888876753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	555
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		9e-17
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		9e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-05
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-04
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-06
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		5e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		6e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		8e-04
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		7e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		8e-04
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		8e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		9e-04
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-05
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-05
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		4e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		6e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		2e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-04
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		4e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		5e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCD 442
           Y CP C         L EH   HT EK Y C  CG  F  K  L  H  TH+  K +KC 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81
Query: 443 FCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC 502
            C K +S R  LR H  T      K  AC  CG+ F    +++ H   H+ E+P+ C  C
Sbjct: 82  ECGKSFSQRANLRAHQRT--HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPEC 139
Query: 503 GIAYKWRKNLVRHQKN 518
           G ++    NL  HQ+ 
Sbjct: 140 GKSFSREDNLHTHQRT 155

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCD 442
           Y+CP C         L++H   HT EK Y C  CG  F   S L  H  TH+  K +KC 
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 443 FCEKVYSHRNRLRYHISTVHENK 465
            C K +S  + L  H  T H+NK
Sbjct: 65  ECGKSFSRSDHLSRHQRT-HQNK 86

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 29/109 (26%)
Query: 409 EKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKS 468
           EK Y C  CG  F   S+L  H  TH+         EK Y                    
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTG--------EKPY-------------------- 33
Query: 469 AACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
             C  CG+ F  S +++KH   H+ E+P+ C  CG ++    +L RHQ+
Sbjct: 34  -KCPECGKSFSQSSDLQKHQRTHTGEKPYKCPECGKSFSRSDHLSRHQR 81

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 439 FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFV 498
           F C  C K +   + L  H+  +H +  +   C  CG+ F    +MKKH  +H+ E+P  
Sbjct: 2   FDCKICGKSFKRSSTLSTHL-LIHSD-TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 499 CKLCGIAYKWRKNLVRHQK 517
           C++CG A+    NL+ H +
Sbjct: 60  CQVCGKAFSQSSNLITHSR 78

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
           E+ Y C  E C   F    SL  H   H+  K F+C  C + +S  + L  HI T     
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT--HTG 59
Query: 466 WKSAACDICGRVFLDSKNMKKHAAVH 491
            K  ACDICGR F  S   K+H  +H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 154 YKCP--DCPAILQTFKNLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKY 204
           Y CP   C        NL  H+ IH+G+K F C I       ++ L++HIR H T EK +
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTH-TGEKPF 63
Query: 205 ICEVCGTSFLTWSSLNSHKYSH 226
            C++CG  F T  + + H   H
Sbjct: 64  ACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
           E+ Y C  E C   F  K++L  H   H+  K F+C  C + +S    L  HI T     
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRT--HTG 59
Query: 466 WKSAACDICGRVFLDSKNMKKHAAVH 491
            K  ACDICGR F       +H  +H
Sbjct: 60  EKPFACDICGRKFATLHTRDRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
           E+ Y C  E C   F   S+L  H   H+  K F+C  C + +S  + L  HI T     
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT--HTG 59
Query: 466 WKSAACDICGRVFLDSKNMKKHAAVH 491
            K  ACDICGR F  S   K+H  +H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 408 SEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKW 466
           ++K+++C+ CG +F    +L+ H  TH++ + + CD C K +  ++ LR H   +H +K 
Sbjct: 14  TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIH-SKE 71
Query: 467 KSAACDICGRVFLDSKNMKKHAAVH 491
           K   C  CG+ F  S+ +  H  +H
Sbjct: 72  KPFKCQECGKGFCQSRTLAVHKTLH 96

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 154 YKCP--DCPAILQTFKNLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKY 204
           Y CP   C        NL  H+ IH+G+K F C I        ++L+ HIR H T EK +
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTH-TGEKPF 63
Query: 205 ICEVCGTSFLTWSSLNSHKYSH 226
            C++CG  F T  +   H   H
Sbjct: 64  ACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
           E+ Y C  E C   F  K++L  H   H+  K F+C  C + +S +  L  HI T     
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRT--HTG 59
Query: 466 WKSAACDICGRVFLDSKNMKKHAAVH 491
            K  ACDICGR F       +H  +H
Sbjct: 60  EKPFACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 444 CEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCG 503
           C++ +S +  L  HI  +H  + K   C IC R F    ++  H   H+ E+PF C +CG
Sbjct: 12  CDRRFSQKTNLDTHIR-IHTGQ-KPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICG 69
Query: 504 IAYKWRKNLVRHQK 517
             +       RH K
Sbjct: 70  RKFATLHTRTRHTK 83

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
           E+ Y C  E C   F   + L  H   H+  K F+C  C + +S  + L  HI T     
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT--HTG 59
Query: 466 WKSAACDICGRVFLDSKNMKKHAAVH 491
            K  ACDICGR F  S   K+H  +H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
           E+ Y C  E C   F   + L  H   H+  K F+C  C + +S  + L  HI T     
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT--HTG 59
Query: 466 WKSAACDICGRVFLDSKNMKKHAAVH 491
            K  ACDICGR F  S   K+H  +H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 385 QCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTT----THSNVKFK 440
           +CP C     + + LK H   HT EK + C  CG  +  K +L+ H        S   F 
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 441 CDFCEKVYSHRNRLRYH-ISTVHENKWKSAACDICGRVFLDSKNMKKH 487
           C  C++ +  R  LR H +S   E  +K   C  C + F+  K+++ H
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYK---CSSCSQQFMQKKDLQSH 113

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
           E+ Y C  E C   F     L  H   H+  K F+C  C + +S  + L  HI T     
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT--HTG 59
Query: 466 WKSAACDICGRVFLDSKNMKKHAAVH 491
            K  ACDICGR F  S   K+H  +H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 444 CEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCG 503
           C++ +S  + L  HI  +H  + K   C IC R F  S ++  H   H+ E+PF C +CG
Sbjct: 12  CDRRFSRSDELTRHIR-IHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 504 IAYKWRKNLVRHQK 517
             +       RH K
Sbjct: 70  RKFARSDERKRHTK 83

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
           E+ Y C  E C   F     L  H   H+  K F+C  C + +S  + L  HI T     
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT--HTG 58
Query: 466 WKSAACDICGRVFLDSKNMKKHAAVH 491
            K  ACDICGR F  S   K+H  +H
Sbjct: 59  EKPFACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 444 CEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCG 503
           C++ +S  + L  HI  +H  + K   C IC R F  S ++  H   H+ E+PF C +CG
Sbjct: 11  CDRRFSRSDELTRHIR-IHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 68
Query: 504 IAYKWRKNLVRHQK 517
             +       RH K
Sbjct: 69  RKFARSDERKRHTK 82

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
           E+ Y C  E C   F     L  H   H+  K F+C  C + +S  + L  HI T     
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT--HTG 59
Query: 466 WKSAACDICGRVFLDSKNMKKHAAVH 491
            K  ACDICGR F  S   K+H  +H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 444 CEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCG 503
           C++ +S  + L  HI  +H  + K   C IC R F  S ++  H   H+ E+PF C +CG
Sbjct: 12  CDRRFSRSDELTRHIR-IHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 504 IAYKWRKNLVRHQK 517
             +       RH K
Sbjct: 70  RKFARSDERKRHTK 83

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 432 TTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVH 491
           ++ S+   KC+ C K +S +++L+ H+        K   C  C     DS ++ KH  +H
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRC--HTGVKPYKCKTCDYAAADSSSLNKHLRIH 59
Query: 492 STERPFVCKLCGIAYKWRKNLVRHQKN 518
           S ERPF C++C  A +    L  H ++
Sbjct: 60  SDERPFKCQICPYASRNSSQLTVHLRS 86

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 386 CPH--CPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCD 442
           CPH  C  + +    +++H + H   + +VC  CG  F+  S L  H   H+  K F+C 
Sbjct: 8   CPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 66
Query: 443 F--CEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHS 492
           F  C K +S    LR H+     ++      D C + F  S N+K H   H+
Sbjct: 67  FEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 444 CEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL-- 501
           C K++   + +R H+   H +  +   C  CG+ F++S  +K+H  VH+ E+PF C    
Sbjct: 13  CTKMFRDNSAMRKHL---HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG 69
Query: 502 CGIAYKWRKNLVRH 515
           CG  +    NL  H
Sbjct: 70  CGKRFSLDFNLRTH 83

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 67/165 (40%), Gaps = 16/165 (9%)
Query: 383 RYQC--PHCPSLLKTFWTLKEHFNIHTSEKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK 438
           RY C    C +     W L+ H   HT EK + C  E C   F     L  H+ TH+  K
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEK 71
Query: 439 -FKCD--FCEKVYSHRNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHST 493
            F CD   C+  ++ +  ++ H +  H  K     C    CG+ F     +K H   H+ 
Sbjct: 72  NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ 131
Query: 494 ERPFVC--KLCGIAYKWRKNLVRHQK-----NCKASAKCSLMTTS 531
           + P+ C  + C   +     L RH+K      CK    CS +  +
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKT 176

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 468 SAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA 523
             AC+ICG++F D  ++ +H   HS E+P+ C +CG+ +K +  +  H ++   S 
Sbjct: 7   GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 407 TSEKK-YVCEL--CGAYFIHKSSLVAHTTTHSNVK-FKCDF--CEKVYSHRNRLRYHIST 460
            SEK+ ++C    C   +   S L  H+  H+  K ++CDF  CE+ +S  ++L+ H   
Sbjct: 1   ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60
Query: 461 VHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL--CGIAYKWRKNLVRH 515
                 K   C  C R F  S ++K H   H+ E+PF C+   C   +     LVRH
Sbjct: 61  --HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK 438
           Y+C  C +  +    L  H  +HT EK Y C +CGA F   ++L  HT  HS  K
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 468 SAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           S  C++C R F   +++K+H   H+ E+P+ C LC  A+  R  L+RH +
Sbjct: 2   SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 405 IHTSEKKYVCELCG-----AYFIHKSSLVAHTTTHSNVK-FKCDF--CEKVYSHRNRLRY 456
           IH   K++VC   G       F  +  LV H   H+  K  KC F  C K YS    L+ 
Sbjct: 28  IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKT 87
Query: 457 HISTVHENKWKSAACDICGRVFLDSKNMKKHA-AVHSTERPFVCKLCGIAYKW 508
           H+ +    K      + C + F ++ +  KH    HS E+P+VCKL G   ++
Sbjct: 88  HLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRY 140

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 471 CDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCS 526
           CD CG+ F  S ++ KH   H+ E+P+ C  CG A+  R +L+ H +    S   S
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 444 CEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCG 503
           C K ++H+++   H+S +H    +   C +CG+ F    ++  H  +H+  +P+ C +C 
Sbjct: 15  CGKSFTHKSQRDRHMS-MHLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICA 72
Query: 504 IAYKWRKNLVRHQKNCKAS 522
             + WR +  RH  +C  S
Sbjct: 73  KRFMWRDSFHRHVTSCTKS 91

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 376 IIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS 435
           +IV+  + Y C  C        +L+ HFNIH+ EKKY C  C   F        H   H+
Sbjct: 15  LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHT 74
Query: 436 N-VKFKCDFCEKVYSHRNRLRYHISTVH 462
              +++C  C K + +   +  HI +VH
Sbjct: 75  GERRYQCLACGKSFINYQFMSSHIKSVH 102

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 31/114 (27%)
Query: 385 QCPHCPSLLKTFWTLKEHFNIHTSEKKYVCEL--CGAYFIHKSSLVAHTTTHSNVK-FKC 441
           +CP      K  + L  H  +HT EK + C    CG  F    +L  H  TH+  K FKC
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123
Query: 442 DFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTER 495
           +F                            + C R F +S + KKH  VH++++
Sbjct: 124 EF----------------------------EGCDRRFANSSDRKKHMHVHTSDK 149

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	555
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-16
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-16
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-13
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	8e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	9e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	7e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	9e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 77.1 bits (191), Expect = 1e-16
 Identities = 50/140 (35%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-F 439
           Y+CP C    K+F     L  H   HT EK Y C  CG  F  +++L AH  TH+  K +
Sbjct: 50  YKCPECG---KSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPY 106

Query: 440 KCDFCEKVYSHRNRLRYHISTVH--ENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPF 497
            C  C K +S    LR H  T H  E   K   C  CG+ F    N+  H   H+ E+P+
Sbjct: 107 ACPECGKSFSQLAHLRAHQRT-HTGE---KPYKCPECGKSFSREDNLHTHQRTHTGEKPY 162

Query: 498 VCKLCGIAYKWRKNLVRHQK 517
            C  CG ++  R  L  HQ+
Sbjct: 163 KCPECGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 75.9 bits (188), Expect = 3e-16
 Identities = 53/140 (37%), Positives = 67/140 (47%), Gaps = 13/140 (9%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-F 439
           Y CP C    K+F     L EH   HT EK Y C  CG  F  K  L  H  TH+  K +
Sbjct: 22  YACPECG---KSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78

Query: 440 KCDFCEKVYSHRNRLRYHISTVH--ENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPF 497
           KC  C K +S R  LR H  T H  E   K  AC  CG+ F    +++ H   H+ E+P+
Sbjct: 79  KCPECGKSFSQRANLRAHQRT-HTGE---KPYACPECGKSFSQLAHLRAHQRTHTGEKPY 134

Query: 498 VCKLCGIAYKWRKNLVRHQK 517
            C  CG ++    NL  HQ+
Sbjct: 135 KCPECGKSFSREDNLHTHQR 154

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 73.2 bits (181), Expect = 3e-15
 Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 398 TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRY 456
           +      +   EK Y C  CG  F     L  H  TH+  K +KC  C K +S +  L  
Sbjct: 8   SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTR 67

Query: 457 HISTVH--ENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVR 514
           H  T H  E   K   C  CG+ F    N++ H   H+ E+P+ C  CG ++    +L  
Sbjct: 68  HQRT-HTGE---KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRA 123

Query: 515 HQK 517
           HQ+
Sbjct: 124 HQR 126

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 53.6 bits (130), Expect = 1e-08
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)

Query: 154 YKCPDCPAILQTFK---NLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKK 203
           YKCP+C    ++F    NL+ H   H+GEK ++C          ++L  H R H T EK 
Sbjct: 78  YKCPECG---KSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH-TGEKP 133

Query: 204 YICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFR 251
           Y C  CG SF    +L++H+ +H   K + C  CG S+     L  H R
Sbjct: 134 YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 53.2 bits (129), Expect = 2e-08
 Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 15/109 (13%)

Query: 154 YKCPDCPAILQTFK---NLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKK 203
           YKCP+C    ++F    +L  H   H+GEK + C          +NL  H R H T EK 
Sbjct: 50  YKCPECG---KSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH-TGEKP 105

Query: 204 YICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFR 251
           Y C  CG SF   + L +H+ +H   K + C  CG S+     L  H R
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR 154

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 168 NLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLN 220
           +      +  GEK ++C         + +L+EH R H T EK Y C  CG SF     L 
Sbjct: 8   SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH-TGEKPYKCPECGKSFSDKKDLT 66

Query: 221 SHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFR 251
            H+ +H   K + C  CG S+     L+ H R
Sbjct: 67  RHQRTHTGEKPYKCPECGKSFSQRANLRAHQR 98

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 48.2 bits (116), Expect = 1e-06
 Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 14/83 (16%)

Query: 154 YKCPDCPAILQTFK---NLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKK 203
           Y CP+C    ++F    +L+ H   H+GEK + C           NL  H R H T EK 
Sbjct: 106 YACPECG---KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH-TGEKP 161

Query: 204 YICEVCGTSFLTWSSLNSHKYSH 226
           Y C  CG SF    +LN H+ +H
Sbjct: 162 YKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 40.1 bits (95), Expect = 5e-04
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 187 NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIF 245
           +S+      +    EK Y C  CG SF     L  H+ +H   K + C  CG S+ +   
Sbjct: 6   SSSSVAQAAL-EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKD 64

Query: 246 LKRHFR 251
           L RH R
Sbjct: 65  LTRHQR 70

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 72.2 bits (178), Expect = 2e-15
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 8/117 (6%)

Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYH--ISTVH 462
            +      C  C   F+ K  L  H   H+  K F+C  C K Y  +  L  H   + ++
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 463 --ENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
             E   +   C +C   F     ++ H   H+ E P+ C  C   +  +K+L  H  
Sbjct: 62  RSE---QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 10/111 (9%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCH-------INSNLSEHIRMH--HTEEKKY 204
            +CP C     +   LK H   H+GEK F C           NL EH   +  +  E+ +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 205 ICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFRESH 254
            C VC  +F     L  H  SH     + CS C   +     L+ H  + H
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 53.3 bits (129), Expect = 6e-09
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 384 YQCPHCPSLLKTFW---TLKEH---FNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV 437
           ++CP C    K ++    L EH     ++ SE+ + C +C   F  +  L  H  +H+  
Sbjct: 36  FECPKCG---KCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE 92

Query: 438 K-FKCDFCEKVYSHRNRLRYHISTVH 462
             +KC  C + +  +  L+ H+  +H
Sbjct: 93  MPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 45.2 bits (108), Expect = 4e-06
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 12/87 (13%)

Query: 176 HSGEKDFSCH-------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHD- 227
            SG     C            L  H R  HT EK + C  CG  +    +L  H+  +  
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 228 ---DRKFSCSHCGNSYKNPIFLKRHFR 251
              ++ F+CS C  +++  + L+ H  
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMV 87

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 471 CDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKN 518
           C  C + FL    +K H   H+ E+PF C  CG  Y  ++NL+ H+  
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEAR 57

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 72.2 bits (178), Expect = 8e-15
 Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 12/136 (8%)

Query: 394 KTF---WTLKEHFNIHTSEKKYVCE--LCGAYFIHKSSLVAHTTTHSNVK-FKCD--FCE 445
             +   W L+ H   HT EK + C+   C   F     L  H+ TH+  K F CD   C+
Sbjct: 22  AAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCD 81

Query: 446 KVYSHRNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTERPFVCK--L 501
             ++ +  ++ H +  H  K     C    CG+ F     +K H   H+ + P+ C    
Sbjct: 82  LRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG 141

Query: 502 CGIAYKWRKNLVRHQK 517
           C   +     L RH+K
Sbjct: 142 CDKRFSLPSRLKRHEK 157

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 57.2 bits (139), Expect = 9e-10
 Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 399 LKEHFNIHTSEKKYVCE--LCGAYFIHKSSLVAHTTTHSNVK---FKCDF--CEKVYSHR 451
           L  H   HT EK + C+   C   F  K+++  H     N+K   + C F  C K +   
Sbjct: 60  LTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKH 119

Query: 452 NRLRYHISTVHENKWKSAAC--DICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWR 509
           N+L+ H  + H  +     C  + C + F     +K+H  VH+         C    K  
Sbjct: 120 NQLKVHQFS-HTQQ-LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW 177

Query: 510 KNLVRHQKNC 519
              ++H   C
Sbjct: 178 TLYLKHVAEC 187

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 25/106 (23%)

Query: 168 NLKCHLDIHSGEKD-------------FSCHINSNLSEHIRMHHTEEKKYIC--EVCGTS 212
           N+K H +     K              F  H  + L  H   H T++  Y C  E C   
Sbjct: 89  NMKKHFNRFHNIKICVYVCHFENCGKAFKKH--NQLKVHQFSH-TQQLPYECPHEGCDKR 145

Query: 213 FLTWSSLNSHKYSHDDRK----FSCSHCGNSYKNPIFLKRHFRESH 254
           F   S L  H+  H         SCS  G ++       +H  E H
Sbjct: 146 FSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTL---YLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.8 bits (112), Expect = 4e-06
 Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 19/116 (16%)

Query: 154 YKC--PDCPAILQTFKNLKCHLDIHSGEKDFSCH---------INSNLSEHIRMHHTEEK 202
           Y C   DC A       L+ HL  H+GEK F C             +L+ H    HT EK
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-HTGEK 71

Query: 203 KYICE--VCGTSFLTWSSLNSHKYSHDDRKF-----SCSHCGNSYKNPIFLKRHFR 251
            + C+   C   F T +++  H     + K         +CG ++K    LK H  
Sbjct: 72  NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF 127

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 398 TLKEHFNIHTSEKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRL 454
            LK H   HT +  Y C  E C   F   S L  H   H+     K D C  V       
Sbjct: 121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 180

Query: 455 RYHISTVHE 463
             H++  H+
Sbjct: 181 LKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 15/94 (15%)

Query: 172 HLDIHSGEKDFSCHI---------NSNLSEHIRMHHTEEKKYICE--VCGTSFLTWSSLN 220
              +    K + C           N  L  H+   HT EK + C+   C   F +   L 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK-HTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 221 SHKYSHDDRK-FSCSH--CGNSYKNPIFLKRHFR 251
            H  +H   K F+C    C   +     +K+HF 
Sbjct: 62  RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN 95

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 66.8 bits (164), Expect = 2e-13
 Identities = 46/152 (30%), Positives = 64/152 (42%), Gaps = 22/152 (14%)

Query: 384 YQCPHCPSLLKTFWTLKEHFN---IHTSEKKYVCELCGAY-----FIHKSSLVAHTTTHS 435
            +   C     +   L  H N   IH   K++VC   G       F  +  LV H   H+
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 436 NVK-FKCDF--CEKVYSHRNRLRYHISTVH--ENKWKSAAC--DICGRVFLDSKNMKKHA 488
             K  KC F  C K YS    L+ H+ + H  E   K   C  + C + F ++ +  KH 
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGE---KPYMCEHEGCSKAFSNASDRAKHQ 119

Query: 489 A-VHSTERPFVCKL--CGIAYKWRKNLVRHQK 517
              HS E+P+VCKL  C   Y    +L +H K
Sbjct: 120 NRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 50.3 bits (121), Expect = 1e-07
 Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 13/121 (10%)

Query: 384 YQCPHC--PSLLKTF---WTLKEHFNIHTSEKKYVC--ELCGAYFIHKSSLVAHTTTHSN 436
           + C        L+ F   + L  H   HT EK + C  E C   +    +L  H  +H+ 
Sbjct: 35  FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94

Query: 437 VK-FKCDF--CEKVYSHRNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVH 491
            K + C+   C K +S+ +    H +  H N+ K   C +  C + + D  +++KH    
Sbjct: 95  EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE-KPYVCKLPGCTKRYTDPSSLRKHVKTV 153

Query: 492 S 492
            
Sbjct: 154 H 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 15/122 (12%)

Query: 409 EKKYVCELCGAYFIHKSSLVAHTTT---HSNVK-FKCDFCE-----KVYSHRNRLRYHIS 459
           E     + C   F  +  LV H  +   H   K F C +       + +  +  L  H+ 
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 460 TVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTERPFVCK--LCGIAYKWRKNLVRH 515
             H  + K   C    C + +   +N+K H   H+ E+P++C+   C  A+    +  +H
Sbjct: 61  R-HTGE-KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKH 118

Query: 516 QK 517
           Q 
Sbjct: 119 QN 120

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 48.0 bits (115), Expect = 7e-07
 Identities = 41/175 (23%), Positives = 63/175 (36%), Gaps = 41/175 (23%)

Query: 70  KCHSCQKCEESFDNCNNLWSHMFIKH---ENSDFVCNLC--PPDSKIMIKYAHLLVRHMK 124
                  C + FD+   L  H+  +H   E  +FVC+      + +       L V HM+
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYML-VVHMR 60

Query: 125 QCHTMQVHIPAVYKNFRSVTSFTMNNITQYKCP--DCPAILQTFKNLKCHLDIHSGEKDF 182
             HT                         +KC    C       +NLK HL  H+GEK +
Sbjct: 61  -RHT---------------------GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY 98

Query: 183 SCHIN---------SNLSEHIRMHHTEEKKYICEV--CGTSFLTWSSLNSHKYSH 226
            C            S+ ++H    H+ EK Y+C++  C   +   SSL  H  + 
Sbjct: 99  MCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 63.2 bits (155), Expect = 1e-12
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 29/120 (24%)

Query: 398 TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYH 457
                     ++K+++C+ CG +F    +L+ H  TH++        E+ Y         
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTD--------ERPY--------- 46

Query: 458 ISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
                        CDIC + F    +++ H  +HS E+PF C+ CG  +   + L  H+ 
Sbjct: 47  ------------TCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 52.8 bits (128), Expect = 6e-09
 Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 9/92 (9%)

Query: 168 NLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLN 220
                      +K+F C         + NL  H R H T+E+ Y C++C  +F     L 
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH-TDERPYTCDICHKAFRRQDHLR 62

Query: 221 SHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFR 251
            H+Y H   K F C  CG  +     L  H  
Sbjct: 63  DHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 50.9 bits (123), Expect = 3e-08
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYIC 206
           + C  C        NL  H   H+ E+ ++C I         +L +H  +H ++EK + C
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIH-SKEKPFKC 76

Query: 207 EVCGTSFLTWSSLNSHKYSH 226
           + CG  F    +L  HK  H
Sbjct: 77  QECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 43.6 bits (104), Expect = 1e-05
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 188 SNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFL 246
           S  S         +K++IC+ CG  F    +L  H+ +H D + ++C  C  +++    L
Sbjct: 3   SGSSGGRLP-SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 247 KRHFR 251
           + H  
Sbjct: 62  RDHRY 66

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.8 bits (102), Expect = 2e-05
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 7/62 (11%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-F 439
           Y C  C    K F     L++H  IH+ EK + C+ CG  F    +L  H T H      
Sbjct: 46  YTCDICH---KAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSP 102

Query: 440 KC 441
             
Sbjct: 103 TA 104

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.2 bits (147), Expect = 7e-12
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 398 TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS--NVK-FKCDFCEKVYSHRNRL 454
           +       H+ EK Y C +C A F    ++  H       NV  F C  C+ V + ++ L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 455 RYHISTVH 462
             H+   H
Sbjct: 62  GVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.6 bits (135), Expect = 3e-10
 Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 8/63 (12%)

Query: 168 NLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKK-YICEVCGTSFLTWSSL 219
           +       HSGEK + C+I       +  +  HI   HTE    + C  C T     S L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 220 NSH 222
             H
Sbjct: 62  GVH 64

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.1 bits (126), Expect = 5e-09
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 189 NLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSH---DDRKFSCSHCGNSYKNPIF 245
           +     R H + EK Y C +C   F    ++  H       +  KF C HC         
Sbjct: 2   SSGSSGRTH-SGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 246 LKRHFRESH 254
           L  H R+ H
Sbjct: 61  LGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 2/74 (2%)

Query: 426 SLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNM 484
           S  +   THS  K ++C  C   ++    ++ HI   H        C  C  V     ++
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 485 KKHA-AVHSTERPF 497
             H    HS   P 
Sbjct: 62  GVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 471 CDICGRVFLDSKNMKKHAAVHSTE--RPFVCKLCGIAYKWRKNLVRHQKN 518
           C IC   F  S  MK H     TE    F C  C      + +L  H + 
Sbjct: 18  CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 9/60 (15%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGE--KDFSCHI-------NSNLSEHIRMHHTEEKKY 204
           Y+C  C A       +K H+     E    F C          S+L  H+R  H+     
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.5 bits (148), Expect = 1e-11
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 10/111 (9%)

Query: 405 IHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVH- 462
             + +K Y C+ CG  F HKS    H + H  ++ + C  C K +  ++ L  H+   H 
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-HT 61

Query: 463 -ENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNL 512
                K   C+IC + F+   +  +H  V S  + +               
Sbjct: 62  GI---KPYECNICAKRFMWRDSFHRH--VTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 48.2 bits (116), Expect = 2e-07
 Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 8/70 (11%)

Query: 175 IHSGEKDFSCH------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDD 228
             SG+K + C         S    H+ MH    + Y C VCG  F     L  H   H  
Sbjct: 4   GSSGDKLYPCQCGKSFTHKSQRDRHMSMH-LGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62

Query: 229 RK-FSCSHCG 237
            K + C+ C 
Sbjct: 63  IKPYECNICA 72

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 45.5 bits (109), Expect = 2e-06
 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 9/76 (11%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-F 439
           Y C  C    K F     L  H  IHT  K Y C +C   F+ + S   H    S  K +
Sbjct: 38  YGCGVCG---KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSY 92

Query: 440 KCDFCEKVYSHRNRLR 455
           +    E+  +  +   
Sbjct: 93  EAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 44.7 bits (107), Expect = 4e-06
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 11/78 (14%)

Query: 168 NLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLN 220
               H+ +H G + + C        +  +L  H+++H T  K Y C +C   F+   S  
Sbjct: 24  QRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH-TGIKPYECNICAKRFMWRDSF- 81

Query: 221 SHKYSHDDRK-FSCSHCG 237
            H++     K +  +   
Sbjct: 82  -HRHVTSCTKSYEAAKAE 98

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 43.2 bits (103), Expect = 1e-05
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 16/78 (20%)

Query: 154 YKCPDCPAILQTFK---NLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKK 203
           Y C  C    + FK   +L  H+ IH+G K + C+I         +   H+    +  K 
Sbjct: 38  YGCGVCG---KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV---TSCTKS 91

Query: 204 YICEVCGTSFLTWSSLNS 221
           Y       +    S  +S
Sbjct: 92  YEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 40.5 bits (96), Expect = 1e-04
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 474 CGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           CG+ F       +H ++H   RP+ C +CG  +K + +LV H K
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 58

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 59.7 bits (146), Expect = 2e-11
 Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVH-- 462
             S   + CE+CG  F  K  L  H   H+ VK +KC  C+   +  + L  H+   H  
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-HSD 61

Query: 463 ENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVC 499
           E  +K   C IC     +S  +  H   H+ +     
Sbjct: 62  ERPFK---CQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 53.6 bits (130), Expect = 3e-09
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-F 439
           ++C  C    K F     LK H   HT  K Y C+ C       SSL  H   HS+ + F
Sbjct: 9   HKCEVCG---KCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65

Query: 440 KCDFCEKVYSHRNRLRYH 457
           KC  C     + ++L  H
Sbjct: 66  KCQICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 51.7 bits (125), Expect = 1e-08
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKKYIC 206
           +KC  C         LK H+  H+G K + C         +S+L++H+R+H ++E+ + C
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH-SDERPFKC 67

Query: 207 EVCGTSFLTWSSLNSHKYSH 226
           ++C  +    S L  H  SH
Sbjct: 68  QICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 24/84 (28%), Positives = 30/84 (35%), Gaps = 9/84 (10%)

Query: 176 HSGEKDFSCH-------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDD 228
                   C            L  H+R  HT  K Y C+ C  +    SSLN H   H D
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 229 RK-FSCSHCGNSYKNPIFLKRHFR 251
            + F C  C  + +N   L  H R
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLR 85

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.4 bits (101), Expect = 2e-05
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 7/62 (11%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-F 439
           Y+C  C           +L +H  IH+ E+ + C++C     + S L  H  +H+     
Sbjct: 37  YKCKTCD---YAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP 93

Query: 440 KC 441
             
Sbjct: 94  SS 95

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 13/120 (10%)

Query: 407 TSEKKYVCE--LCGAYFIHKSSLVAHTTTHSNVK-FKCDF--CEKVYSHRNRLRYHISTV 461
           + ++ ++C    C   +   S L  H+  H+  K ++CDF  CE+ +S  ++L+ H    
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR- 60

Query: 462 H--ENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL--CGIAYKWRKNLVRHQK 517
           H      K   C  C R F  S ++K H   H+ E+PF C+   C   +     LVRH  
Sbjct: 61  HTGV---KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 13/96 (13%)

Query: 168 NLKCHLDIHSGEKDFSCHI---------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSS 218
           +L+ H   H+GEK + C           +  L  H R H T  K + C+ C   F     
Sbjct: 23  HLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH-TGVKPFQCKTCQRKFSRSDH 81

Query: 219 LNSHKYSHDDRK-FSCS--HCGNSYKNPIFLKRHFR 251
           L +H  +H   K FSC    C   +     L RH  
Sbjct: 82  LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 47.1 bits (113), Expect = 7e-07
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 399 LKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDF--CEKVYSHRNRLR 455
           LK H   HT  K + C+ C   F     L  HT TH+  K F C +  C+K ++  + L 
Sbjct: 54  LKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV 113

Query: 456 YHIST 460
            H + 
Sbjct: 114 RHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 44.4 bits (106), Expect = 7e-06
 Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 10/68 (14%)

Query: 168 NLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEV--CGTSFLTWSS 218
            LK H   H+G K F C         + +L  H R H T EK + C    C   F     
Sbjct: 53  QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH-TGEKPFSCRWPSCQKKFARSDE 111

Query: 219 LNSHKYSH 226
           L  H   H
Sbjct: 112 LVRHHNMH 119

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 60.4 bits (147), Expect = 5e-11
 Identities = 37/142 (26%), Positives = 52/142 (36%), Gaps = 20/142 (14%)

Query: 374 CRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYV---------CELCGAYFIHK 424
           C+ I E  +      C     T   L  H  +                 C   G  F  K
Sbjct: 16  CKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAK 75

Query: 425 SSLVAHTTTHSNVK-FKCDF--CEKVYSHRNRLRYHISTVH--ENKWKSAACDI--CGRV 477
             LV H   H+  K F C F  C K+++    L+ H  T H  E   K   C+   C R 
Sbjct: 76  YKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT-HTGE---KPFKCEFEGCDRR 131

Query: 478 FLDSKNMKKHAAVHSTERPFVC 499
           F +S + KKH  VH++++    
Sbjct: 132 FANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 19/140 (13%)

Query: 394 KTFWTLKEHFN---IHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK----------FK 440
            +   +K+  +   I  ++     + C   F     LV H T                 +
Sbjct: 5   SSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE 64

Query: 441 CDFCEKVYSHRNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTERPFV 498
           C    K +  + +L  HI   H  + K   C    CG++F  S+N+K H   H+ E+PF 
Sbjct: 65  CPREGKSFKAKYKLVNHIRV-HTGE-KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 499 CKL--CGIAYKWRKNLVRHQ 516
           C+   C   +    +  +H 
Sbjct: 123 CEFEGCDRRFANSSDRKKHM 142

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 45.4 bits (108), Expect = 7e-06
 Identities = 36/171 (21%), Positives = 49/171 (28%), Gaps = 30/171 (17%)

Query: 76  KCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQVHIPA 135
               S        S  +I           C    +       L V H+   H        
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSC---DRTFSTMHEL-VTHVTMEH-------- 49

Query: 136 VYKNFRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHI--------- 186
           V    ++            +CP      +    L  H+ +H+GEK F C           
Sbjct: 50  VGGPEQNNHV-----CYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR 104

Query: 187 NSNLSEHIRMHHTEEKKYICEV--CGTSFLTWSSLNSHKYSHDDRK-FSCS 234
           + NL  H R  HT EK + CE   C   F   S    H + H   K    S
Sbjct: 105 SENLKIHKRT-HTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 12/76 (15%)

Query: 188 SNLSEHIRMH--HTEEKKYICEVCGTSFLTWSSLNSH----------KYSHDDRKFSCSH 235
             + + +        +     + C  +F T   L +H          + +H      C  
Sbjct: 8   QPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR 67

Query: 236 CGNSYKNPIFLKRHFR 251
            G S+K    L  H R
Sbjct: 68  EGKSFKAKYKLVNHIR 83

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 57.4 bits (139), Expect = 7e-11
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 5/77 (6%)

Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK----FKCDFCEKVYSHRNRLRYHISTV 461
            +      CE+CG     K+SL  H   H+       F C+FC K +   + +  H S  
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 462 HENKWKSAACDICGRVF 478
           H      A  +  G   
Sbjct: 62  HPAL-LLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.9 bits (122), Expect = 1e-08
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK----FSCSHCGNSYKNPIFLKRHFRES 253
            +      CE+CG +    +SLN H+  H +      F C  CG  ++ P  +  H  +S
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 254 H 254
           H
Sbjct: 62  H 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 9/60 (15%)

Query: 176 HSGEKDFSCHI-------NSNLSEHIRMHHTE--EKKYICEVCGTSFLTWSSLNSHKYSH 226
            SG     C I        ++L+ H R H       ++ CE CG  F    S+ +H+   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.9 bits (104), Expect = 4e-06
 Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 9/57 (15%)

Query: 384 YQCPHCPSLLKTF---WTLKEHFNIHTS---EKKYVCELCGAYFIHKSSLVAHTTTH 434
            QC  C     T     +L  H   H       ++ CE CG  F    S+ AH +  
Sbjct: 8   LQCEICG---FTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.5 bits (103), Expect = 5e-06
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 471 CDICGRVFLDSKNMKKHAAVHST---ERPFVCKLCGIAYKWRKNLVRHQK 517
           C+ICG       ++  H   H+       F C+ CG  ++   ++  H+ 
Sbjct: 10  CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS 59

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 12/70 (17%), Positives = 19/70 (27%), Gaps = 10/70 (14%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHS---GEKDFSCHI-------NSNLSEHIRMHHTEEKK 203
            +C  C    +   +L  H   H+       F C           +++ H    H     
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 204 YICEVCGTSF 213
              E  G S 
Sbjct: 68  APQESSGPSS 77

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 55.6 bits (135), Expect = 4e-10
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 11/89 (12%)

Query: 176 HSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSH-- 226
            SG    +C I         +L+ H   H + EK Y C VCG  F     ++ H  SH  
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSH-SGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 227 -DDRKFSCSHCGNSYKNPIFLKRHFRESH 254
              + + C  CG  +  P  L  H ++ H
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 52.5 bits (127), Expect = 7e-09
 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS--NVK 438
             C  C    K F     L  H   H+ EK Y C +CG  F  K  +  H  +H     K
Sbjct: 8   VACEICG---KIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 439 -FKCDFCEKVYSHRNRLRYHISTVH 462
            + C  C K +S  + L  HI  VH
Sbjct: 65  PYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 27/114 (23%), Positives = 37/114 (32%), Gaps = 31/114 (27%)

Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENK 465
            +      CE+CG  F     L  H  +HS         EK YS                
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSG--------EKPYS---------------- 37

Query: 466 WKSAACDICGRVFLDSKNMKKHAAVHSTE--RPFVCKLCGIAYKWRKNLVRHQK 517
                C +CG  F     M  H   H     +P++C+ CG  +    +L  H K
Sbjct: 38  -----CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKK-YI 205
             C  C  I +   +L  H   HSGEK +SC            +S H+R H     K YI
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 206 CEVCGTSFLTWSSLNSH 222
           C+ CG  F     LN H
Sbjct: 68  CQSCGKGFSRPDHLNGH 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 384 YQCPHCPSLLKTF---WTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFK 440
           +QC  C    + F     L  H   HT EK + C++CG  F        H      +   
Sbjct: 4   FQCRICM---RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPIL 60

Query: 441 CDFCEKVYSHRNRLRYHIS 459
            D  E++ S    L   ++
Sbjct: 61  EDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 49.8 bits (120), Expect = 4e-08
 Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 9/77 (11%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYIC 206
           ++C  C        +L  H+  H+GEK F+C I       +     H  + H      + 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH--ILPILE 61

Query: 207 EVCGTSFLTWSSLNSHK 223
           +           L +  
Sbjct: 62  DKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 44.4 bits (106), Expect = 3e-06
 Identities = 22/108 (20%), Positives = 31/108 (28%), Gaps = 30/108 (27%)

Query: 410 KKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSA 469
           K + C +C   F     L  H  TH+         EK ++                    
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTG--------EKPFA-------------------- 33

Query: 470 ACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
            CDICGR F  S   K+H  +     P +            +L     
Sbjct: 34  -CDICGRKFARSDERKRHRDIQ-HILPILEDKVEELLSKNYHLENEVA 79

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 53.6 bits (130), Expect = 1e-09
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 399 LKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYH 457
              H ++  S+K Y C+ C A F +K +L +H T H+  K ++C+ C   ++    L+ H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 45.9 bits (110), Expect = 7e-07
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)

Query: 168 NLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLN 220
           +   H  +   +K + C           NL+ H  +H T EK Y C +CG  F   ++L 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH-TGEKPYRCNICGAQFNRPANLK 62

Query: 221 SHKYSH 226
           +H   H
Sbjct: 63  THTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 188 SNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFL 246
            +   H  M    +K Y C+ C  SF    +L SHK  H   K + C+ CG  +  P  L
Sbjct: 3   HHHHHHSHMT-HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61

Query: 247 KRHFR 251
           K H R
Sbjct: 62  KTHTR 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.8 bits (102), Expect = 9e-06
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
           Y+C  C     +F     L  H  +HT EK Y C +CGA F   ++L  HT  H
Sbjct: 18  YKCDRCQ---ASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 16/47 (34%), Positives = 23/47 (48%)

Query: 471 CDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           CD C   F    N+  H  VH+ E+P+ C +CG  +    NL  H +
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 20/77 (25%), Positives = 25/77 (32%), Gaps = 12/77 (15%)

Query: 176 HSGEKDFSCHIN---------SNLSEHIRMHHTEEKKYICE--VCGTSFLTWSSLNSHKY 224
            SG     C              L+ H +  H  +K + C    CG SF     L  H  
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 225 SH-DDRKFSCSHCGNSY 240
            H D R + C   G S 
Sbjct: 62  LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 32/102 (31%)

Query: 406 HTSEKKYVCEL--CGAYFIHKSSLVAHT-TTHSNVK-FKCDFCEKVYSHRNRLRYHISTV 461
            +      C+   CG  F ++  L  H    H + K F C                    
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPA---------------- 45

Query: 462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCG 503
                       CG+ F   K++K+H  +HS  R ++C+  G
Sbjct: 46  ------------CGKSFNFKKHLKEHMKLHSDTRDYICEFSG 75

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 4/52 (7%)

Query: 399 LKEHFNI-HTSEKKYVCE--LCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEK 446
           L  H    H  +K + C    CG  F  K  L  H   HS+ + + C+F   
Sbjct: 25  LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP 76

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 405 IHTSEKKYVCELCGAYFIHKSSLVAH--TTTHSNVK-FKCDFCEKVYSHRNRLRYHISTV 461
               E  Y C++C   + H S+   H  T+   NVK + C FC K ++ ++ +  H+  +
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 462 HE 463
           H+
Sbjct: 64  HK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 13/60 (21%), Positives = 18/60 (30%), Gaps = 8/60 (13%)

Query: 175 IHSGEKDFSCHI-------NSNLSEHIR-MHHTEEKKYICEVCGTSFLTWSSLNSHKYSH 226
              GE  + C +        SN   H    H    K Y C  C   F    ++ +H    
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 471 CDICGRVFLDSKNMKKH--AAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           C +C RV+    N  +H   +     + + C  C   +  + N+  H K
Sbjct: 13  CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 3/57 (5%)

Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSHD---DRKFSCSHCGNSYKNPIFLKRHFR 251
              E  Y C+VC   +   S+   H  +      + + C  C   +     +  H +
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.9 bits (128), Expect = 4e-09
 Identities = 19/106 (17%), Positives = 26/106 (24%), Gaps = 25/106 (23%)

Query: 398 TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYH 457
           +       HT EK Y C  C   F  K  L  H   +                       
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRY----------------------- 38

Query: 458 ISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCG 503
                     +  C  CG+ F     M +HA   +       +  G
Sbjct: 39  --HDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG 82

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 11/84 (13%)

Query: 168 NLKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTE---EKKYICEVCGTSFLTWS 217
           +       H+GEK ++C            L  H + +H        ++C  CG +F   +
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 218 SLNSHKYSHDDRK-FSCSHCGNSY 240
           ++  H  +          + G S 
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 189 NLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSH-----DDRKFSCSHCGNSYKNP 243
           +     R H T EK Y C  C  +F     L+ H   +         F CS CG ++   
Sbjct: 2   SSGSSGRTH-TGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60

Query: 244 IFLKRHFR 251
             + RH  
Sbjct: 61  NTMARHAD 68

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 53.7 bits (130), Expect = 4e-09
 Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 12/117 (10%)

Query: 409 EKKYVCEL--CGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVH--EN 464
            +   C    C   F   S++  H  TH      C  C K +   ++L+ H    H  E 
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLV-HTGE- 60

Query: 465 KWKSAACDI--CGRVFLDSKNMKKHAAVHSTERPFVCKL--CGIAYKWRKNLVRHQK 517
             K   C    CG+ F    N++ H  +H+ +RP+VC    C   +    NL  H  
Sbjct: 61  --KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 12/84 (14%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHI---------NSNLSEHIRMHHTEEKKY 204
           + C +C         LK H  +H+GEK F C           + NL  H+R+ HT ++ Y
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-HTGDRPY 93

Query: 205 ICEV--CGTSFLTWSSLNSHKYSH 226
           +C    C   F   ++L SH  +H
Sbjct: 94  VCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.7 bits (99), Expect = 8e-05
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 180 KDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSH--C 236
           K F    NS + +H+  H    + ++C  CG +F+  S L  H+  H   K F C+   C
Sbjct: 15  KMFRD--NSAMRKHLHTHG--PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC 70

Query: 237 GNSYKNPIFLKRHFR 251
           G  +     L+ H R
Sbjct: 71  GKRFSLDFNLRTHVR 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 51.7 bits (125), Expect = 8e-09
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)

Query: 168 NLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLN 220
           +L  H+ IH+G+K F C I       + +L+ HIR H T EK + C++CG  F       
Sbjct: 21  SLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH-TGEKPFACDICGRKFARSDERK 79

Query: 221 SHKYSH 226
            H   H
Sbjct: 80  RHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 49.8 bits (120), Expect = 4e-08
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 398 TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRY 456
           +L  H  IHT +K + C +C   F     L  H  TH+  K F CD C + ++  +  + 
Sbjct: 21  SLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR 80

Query: 457 HIST 460
           H   
Sbjct: 81  HTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 48.2 bits (116), Expect = 2e-07
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 180 KDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGN 238
           + FS     +L+ HIR+H T +K + C +C  +F     L +H  +H   K F+C  CG 
Sbjct: 14  RRFSQS--GSLTRHIRIH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

Query: 239 SYKNPIFLKRHFR 251
            +      KRH +
Sbjct: 71  KFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.5 bits (109), Expect = 2e-06
 Identities = 27/111 (24%), Positives = 38/111 (34%), Gaps = 31/111 (27%)

Query: 409 EKKYVCEL--CGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKW 466
           E+ Y C +  C   F    SL  H   H+         +K +                  
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTG--------QKPFQ----------------- 36

Query: 467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
               C IC R F  S ++  H   H+ E+PF C +CG  +       RH K
Sbjct: 37  ----CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 6/54 (11%)

Query: 384 YQCPHCPSLLKTF---WTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
           +QC  C   ++ F     L  H   HT EK + C++CG  F        HT  H
Sbjct: 35  FQCRIC---MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-F 439
           + C  C    K+F    TL  H  IH+  + Y C+ CG  F  KS +  HT  H+  K  
Sbjct: 2   FDCKICG---KSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH 58

Query: 440 KCDFCEKVYSHRNRLRYH 457
           KC  C K +S  + L  H
Sbjct: 59  KCQVCGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 50.1 bits (121), Expect = 3e-08
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 14/83 (16%)

Query: 154 YKCPDCPAILQTFK---NLKCHLDIHSGEKDFSC-------HINSNLSEHIRMHHTEEKK 203
           + C  C    ++FK    L  HL IHS  + + C       H  S++ +H  +H T EK 
Sbjct: 2   FDCKICG---KSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH-TGEKP 57

Query: 204 YICEVCGTSFLTWSSLNSHKYSH 226
           + C+VCG +F   S+L +H   H
Sbjct: 58  HKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 29/106 (27%)

Query: 412 YVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAAC 471
           + C++CG  F   S+L  H   HS+         + Y                      C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSD--------TRPY---------------------PC 32

Query: 472 DICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
             CG+ F    +MKKH  +H+ E+P  C++CG A+    NL+ H +
Sbjct: 33  QYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR 78

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 40.9 bits (97), Expect = 5e-05
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 6/54 (11%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
           Y C +C    K F     +K+H  IHT EK + C++CG  F   S+L+ H+  H
Sbjct: 30  YPCQYCG---KRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 399 LKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYH 457
                 IH+ EK Y C  CG  F   S LV H   H+  K +KC  C K +S  + L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 8/65 (12%)

Query: 169 LKCHLDIHSGEKDFSCH-------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNS 221
                 IHSGEK + C         +S L +H R+H T EK Y C  CG +F   S L +
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH-TGEKPYKCLECGKAFSQNSGLIN 60

Query: 222 HKYSH 226
           H+  H
Sbjct: 61  HQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 471 CDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           C  CG+ F  S  + +H  VH+ E+P+ C  CG A+     L+ HQ+
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.5 bits (96), Expect = 6e-05
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK 438
           Y C  C    K F     L +H  +HT EK Y C  CG  F   S L+ H   H++  
Sbjct: 15  YGCVECG---KAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 190 LSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKR 248
            S    +H + EK Y C  CG +F   S L  H+  H   K + C  CG ++     L  
Sbjct: 2   SSGSSGIH-SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLIN 60

Query: 249 HFR 251
           H R
Sbjct: 61  HQR 63

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.1 bits (121), Expect = 2e-08
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 398 TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRY 456
           +           ++Y C+ CG  F H S L  H  TH+  K +KCD C K +  R+ L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 457 H 457
           H
Sbjct: 65  H 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.5 bits (109), Expect = 1e-06
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 8/66 (12%)

Query: 168 NLKCHLDIHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLN 220
           +           + + C         +S+LS+H R H T EK Y C+ CG +F+  S L 
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH-TGEKPYKCDECGKAFIQRSHLI 63

Query: 221 SHKYSH 226
            H   H
Sbjct: 64  GHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.2 bits (103), Expect = 7e-06
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 187 NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIF 245
           + +          E ++Y C+ CG SF   S L+ H+ +H   K + C  CG ++     
Sbjct: 3   SGSSGRSEWQQ-RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 246 LKRHFR 251
           L  H R
Sbjct: 62  LIGHHR 67

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.0 bits (100), Expect = 2e-05
 Identities = 18/46 (39%), Positives = 27/46 (58%)

Query: 471 CDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQ 516
           CD CG+ F  S ++ KH   H+ E+P+ C  CG A+  R +L+ H 
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH 66

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.3 bits (98), Expect = 4e-05
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 384 YQCPHCPSLLKTFW---TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK 438
           Y+C  C    K+F     L +H   HT EK Y C+ CG  FI +S L+ H   H+   
Sbjct: 19  YKCDECG---KSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHIST 460
            +S     C  C      K++L  H   H   + FKC++C       + L  H+  
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 9/69 (13%)

Query: 176 HSGEKDFSCH-------INSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDD 228
            S      C          + L  H R+H   ++ + C  C       S+L+ H      
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIH-CTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 229 RKFSCSHCG 237
              S    G
Sbjct: 63  DM-SGPSSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 40.9 bits (97), Expect = 4e-05
 Identities = 11/51 (21%), Positives = 19/51 (37%)

Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
            +C  C     +   L+ H  IH +++ + C  C       S+L  H    
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query: 471 CDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           C  C         ++ H  +H T+RPF C  C    K   NL +H K
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK-FSCSHCGNSYKNPIFLKRHFR 251
            +      C  C  S  + ++L  H+  H   + F C++C    K P  L +H +
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 10/82 (12%)

Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHI---------NSNLSEHIRMHHTEEKKY 204
                C        +LK HL  H+GEK + C           +  L+ H R H T  + +
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH-TGHRPF 66

Query: 205 ICEVCGTSFLTWSSLNSHKYSH 226
            C+ C  +F     L  H   H
Sbjct: 67  QCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.4 bits (111), Expect = 6e-07
 Identities = 27/113 (23%), Positives = 38/113 (33%), Gaps = 29/113 (25%)

Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHEN 464
            T+        CG  +   S L AH  TH+  K + CD+                     
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDG------------------- 42

Query: 465 KWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
                    CG  F  S  + +H   H+  RPF C+ C  A+    +L  H K
Sbjct: 43  ---------CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.4 bits (111), Expect = 8e-07
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 9/84 (10%)

Query: 383 RYQCPHCPSLLKTFWT---LKEHFNIHTSEKKYVC--ELCGAYFIHKSSLVAHTTTHSNV 437
                 C    KT+     LK H   HT EK Y C  + CG  F     L  H   H+  
Sbjct: 7   TCDYAGCG---KTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH 63

Query: 438 K-FKCDFCEKVYSHRNRLRYHIST 460
           + F+C  C++ +S  + L  H+  
Sbjct: 64  RPFQCQKCDRAFSRSDHLALHMKR 87

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 10/68 (14%)

Query: 168 NLKCHLDIHSGEKDFSCHI---------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSS 218
           +LK HL  H+GEK + C           +  L+ H R H T  K + C VC  SF     
Sbjct: 32  HLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH-TGAKPFQCGVCNRSFSRSDH 90

Query: 219 LNSHKYSH 226
           L  H   H
Sbjct: 91  LALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 399 LKEHFNIHTSEKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLR 455
           LK H   HT EK Y C  E C   F     L  H   H+  K F+C  C + +S  + L 
Sbjct: 33  LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92

Query: 456 YHISTVHEN 464
            H+   H+N
Sbjct: 93  LHMKR-HQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 31/112 (27%)

Query: 409 EKKYVCEL--CGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENK 465
            + + C+   C   +   S L AH  TH+  K +KC +                      
Sbjct: 13  RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEG-------------------- 52

Query: 466 WKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
                   C   F  S  + +H   H+  +PF C +C  ++    +L  H K
Sbjct: 53  --------CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 45.7 bits (107), Expect = 2e-06
 Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 10/96 (10%)

Query: 178 GEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK 230
            ++ + C +             H R+        +C  C   F +      H+   + +K
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRN---AAVCPYCSLRFFSPELKQEHESKCEYKK 69

Query: 231 FSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYA 266
            +C  C  ++K+   + RH  E H +++ +     +
Sbjct: 70  LTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSGPS 105

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.8 bits (97), Expect = 5e-05
 Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 2/85 (2%)

Query: 378 VEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV 437
           VE+   YQC  C + L +      H  +       VC  C   F        H +     
Sbjct: 11  VENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYK 68

Query: 438 KFKCDFCEKVYSHRNRLRYHISTVH 462
           K  C  C + +     +  H   VH
Sbjct: 69  KLTCLECMRTFKSSFSIWRHQVEVH 93

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.1 bits (90), Expect = 5e-04
 Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 5/93 (5%)

Query: 425 SSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNM 484
           S     +   +   ++C  C    S       H           A C  C   F   +  
Sbjct: 3   SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA----AVCPYCSLRFFSPELK 58

Query: 485 KKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           ++H +     +   C  C   +K   ++ RHQ 
Sbjct: 59  QEHES-KCEYKKLTCLECMRTFKSSFSIWRHQV 90

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.1 bits (106), Expect = 4e-06
 Identities = 14/118 (11%), Positives = 35/118 (29%), Gaps = 24/118 (20%)

Query: 398 TLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYH 457
           + K + +I T   K+ C+ C A +     L  H     + +      +            
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDN----------- 54

Query: 458 ISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRH 515
                         +         +++ +       ++   C  CG +++  ++L  H
Sbjct: 55  -------------NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 399 LKEHFNIHTSEKKYVC--ELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLR 455
           LK H   HT +  Y C  E C   F   S L  H   H+     K D C  V        
Sbjct: 19  LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 78

Query: 456 YHISTVH 462
            H++  H
Sbjct: 79  KHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 40.7 bits (96), Expect = 6e-05
 Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 12/80 (15%)

Query: 154 YKC--PDCPAILQTFKNLKCHLDIHSGEKDFSCH---------INSNLSEHIRMHHTEEK 202
           Y C   +C    +    LK H   H+ +  + C          + S L  H ++H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH-AGYP 60

Query: 203 KYICEVCGTSFLTWSSLNSH 222
               + C     TW+    H
Sbjct: 61  CKKDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 6/78 (7%)

Query: 180 KDFSCHINSNLSEHIRMHHTEEKKYIC--EVCGTSFLTWSSLNSHKYSHD-DRKFSCSHC 236
           K F  H  + L  H   H T++  Y C  E C   F   S L  H+  H          C
Sbjct: 11  KAFKKH--NQLKVHQFSH-TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSC 67

Query: 237 GNSYKNPIFLKRHFRESH 254
               K      +H  E H
Sbjct: 68  SFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 19/109 (17%), Positives = 30/109 (27%), Gaps = 31/109 (28%)

Query: 412 YVCEL--CGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKWKS 468
           YVC    CG  F   + L  H  +H+    ++C                           
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG----------------------- 38

Query: 469 AACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
                C + F     +K+H  VH+         C    K     ++H  
Sbjct: 39  -----CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 6e-06
 Identities = 43/311 (13%), Positives = 75/311 (24%), Gaps = 115/311 (36%)

Query: 146 FTMNNITQYKCPD-CPAILQTFKNLKCHLDIHSGEKDFSC-HINSNLSEHIRMHHTEEKK 203
           F      QY+  D        F              +F C  +       +     EE  
Sbjct: 9   FETGEH-QYQYKDILSVFEDAFV------------DNFDCKDVQDMPKSILS---KEEID 52

Query: 204 YIC----EVCGTSFLTWSSLNSHK--------------Y--------------SHDDRKF 231
           +I      V GT  L W+ L+  +              Y              S   R +
Sbjct: 53  HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY 112

Query: 232 SCSHCGNSYKNPIFLKRHF-RESHLKHSKS-----NPEQYAV--------KS------LQ 271
                     N +F K +  R       +       P +  +        K+        
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL 172

Query: 272 DI---------MYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCN 322
                      ++W N+                 NC     +   +     Q ++ +  +
Sbjct: 173 SYKVQCKMDFKIFWLNL----------------KNCNSPETVLEMLQKLLYQ-IDPNWTS 215

Query: 323 ECDSKHNDCQSLWDHVFSEHKNMLAFSKP--------DDSENKISKVAEKQYWKDVEEKC 374
             D   N    +  H        L  SKP         +       V   + W      C
Sbjct: 216 RSDHSSNIKLRI--HSIQAELRRLLKSKPYENCLLVLLN-------VQNAKAWNAFNLSC 266

Query: 375 RIIVEDTMRYQ 385
           +I++  T R++
Sbjct: 267 KILL--TTRFK 275

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 7e-06
 Identities = 59/433 (13%), Positives = 114/433 (26%), Gaps = 149/433 (34%)

Query: 73  SCQKCEESFDNCNNLWSHMFIK-HENSDFVCNLCPPDSKIMIKYAHLLVRHMKQCHTMQV 131
           +C   E   +    L   +       SD   N         I+    L R +K       
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN--IKLRIHSIQAE--LRRLLKS------ 240

Query: 132 HIPAVYKN----FRSVTSFTMNNITQYKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHIN 187
                Y+N      +V +                    F NL C + + +  K  +  ++
Sbjct: 241 ---KPYENCLLVLLNVQN--------------AKAWNAF-NLSCKILLTTRFKQVTDFLS 282

Query: 188 SNLSEHIRMHH------TEEKKYICEVCGTSFLTWSSLNSHKYSHDDRK---FSCSHCGN 238
           +  + HI + H       +E K +        L +          +         S    
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSL-------LLKYLDCRPQDLPREVLTTNPRRLSIIAE 335

Query: 239 SYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCY--LSATCSIHRPS 296
           S ++ +        +   + K          L  I+       +     L        P+
Sbjct: 336 SIRDGL--------ATWDNWK----HVNCDKLTTII-------ESSLNVLE-------PA 369

Query: 297 NCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSEN 356
             +  +                                   VF           P  +  
Sbjct: 370 EYRKMFDRLS-------------------------------VF-----------PPSA-- 385

Query: 357 KI-SKVAEKQYWKD-VEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVC 414
            I + +     W D ++    ++V    +Y      SL++     +   +I +   +   
Sbjct: 386 HIPTILLSL-IWFDVIKSDVMVVVNKLHKY------SLVEK-QPKESTISIPSIYLELKV 437

Query: 415 ELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEK------VYSHRNRLRYHISTV-HENKWK 467
           +L   Y +H+ S+V H        F  D           YSH   + +H+  + H  +  
Sbjct: 438 KLENEYALHR-SIVDHYNIPK--TFDSDDLIPPYLDQYFYSH---IGHHLKNIEHPERM- 490

Query: 468 SAACDICGRVFLD 480
                +   VFLD
Sbjct: 491 ----TLFRMVFLD 499

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 8e-06
 Identities = 80/605 (13%), Positives = 164/605 (27%), Gaps = 174/605 (28%)

Query: 4   YHCEFHFDVESCAVS-RLQDITFPCEE-------CKELCVLSKYCIKHKDCSKAMSTPAP 55
           +H   H D E+     + +DI    E+       CK++  + K  +  ++    + +   
Sbjct: 1   HHHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60

Query: 56  SSES------VCTEHSNLFPK--------------------CHSCQKCEESFDNC-NNLW 88
            S +      + ++   +  K                              +    + L+
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 89  S--HMFIKHENSDFVCNLCPPDSKIMIKYAHLLVRHMKQ--CHTM-----QVHIPAVYKN 139
           +   +F K+       N+      + ++ A L +R  K      +           V  +
Sbjct: 121 NDNQVFAKY-------NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173

Query: 140 FRSVTSFTMN----NITQYKCPDCPAILQTFKNLKCHLDI-HSGEKDFSCHINSNLSE-- 192
           ++            N+     P+   +L+  + L   +D   +   D S +I   +    
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPE--TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ 231

Query: 193 -HIRMHHTEEKKYIC-----EVCGTSFLTWSSLNSHKYSHDDRKFSC------SHCGNSY 240
             +R     +    C      V       W++ N           SC           + 
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAK--AWNAFN----------LSCKILLTTRFKQVTD 279

Query: 241 KNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYL-SATCSIHRPSNCK 299
                   H    H   + +  E         ++ + +   Q   L     + + P    
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDE-----VKSLLLKYLDCRPQD--LPREVLTTN-P---- 327

Query: 300 DQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKPDDSENKIS 359
                 +SI  E  +       N            W HV  +    +     + S N + 
Sbjct: 328 ----RRLSIIAESIRDGLATWDN------------WKHVNCDKLTTII----ESSLNVLE 367

Query: 360 KVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPS-LLKTFWTLKEHFNIHTSEKKYVCELCG 418
               ++ +        +           H P+ LL   W     F++  S+   V     
Sbjct: 368 PAEYRKMFDR----LSVFPPSA------HIPTILLSLIW-----FDVIKSDVMVVVNKL- 411

Query: 419 AYFIHKSSLVAHTTTHSNVKFKCDFCEKVYS-HRNRLRYHIS-----TVHENKWKSAACD 472
               HK SLV           +    E   S     L   +       +H          
Sbjct: 412 ----HKYSLV-----------EKQPKESTISIPSIYLELKVKLENEYALH---------- 446

Query: 473 ICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTSP 532
              R  +D  N+ K         P++ +     Y +  ++  H KN +   + +L     
Sbjct: 447 ---RSIVDHYNIPKTFDSDDLIPPYLDQ-----Y-FYSHIGHHLKNIEHPERMTLFRMVF 497

Query: 533 LSVKF 537
           L  +F
Sbjct: 498 LDFRF 502

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 17/47 (36%), Positives = 29/47 (61%)

Query: 471 CDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           C++C R F   +++K+H   H+ E+P+ C LC  A+  R  L+RH +
Sbjct: 5   CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.2 bits (95), Expect = 6e-05
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 410 KKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCDFCEKVYSHRNRLRYHISTVH 462
           + +VCE+C   F  +  L  H  +H+N K + C  C + ++ R+ L  H   +H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 384 YQCPHCPSLLKTFWT---LKEHFNIHTSEKKYVCELCGAYFIHKSSLVAH 430
           + C  C    + F     LK H+  HT+EK Y C LC   F  +  L+ H
Sbjct: 3   FVCEVCT---RAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 7/46 (15%)

Query: 175 IHSGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEVCGTSF 213
             S  K + C           +L+ HI+  HT E+ + C+V  +  
Sbjct: 6   SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 40.3 bits (95), Expect = 5e-05
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 2/50 (4%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHT-TTHSNVK-FKCDFCEKVYS 449
             +  +  K Y+C+ CG  F     L  H    H++ +  KC       S
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T E  ++C  CG  F HK++L+ H   H+  +    
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK 438
             +  + EK Y C  CG  FI KS L+ H  TH+ V 
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 401 EHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
              +  T E+ Y C  CG  F  KS+L+ H   H+  K    
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCD 442
             +  T EK + C++CG  F  +S L  H+  H+  K     
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
                  EK Y CE+CG  F H  +L +H   H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 8e-05
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F  +SSL  H  THS  K    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 8e-05
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C++C   F + SSL  H   H+  K    
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.5 bits (92), Expect = 8e-05
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC 502
           K  AC+ICG++F D  ++ +H   HS E+P+     
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 9e-05
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 401 EHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
              +  T E+ Y C  CG  FI KS+L  H   H   K    
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.1 bits (92), Expect = 9e-05
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
                  EK Y C+ CG  F  K SL+ H   H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 9e-05
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y+C  CG  F  +S+L+ H   H+  K    
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 9e-05
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y CE CG  FI +  L  H   H+  K    
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T E+ Y+C +CG  F  +S+L+ H   H+  K    
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK + C  C   F  KS+L+ H  TH+  K    
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 17/56 (30%), Positives = 24/56 (42%)

Query: 383 RYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK 438
           +Y C  C    K    LK+H   HT  + Y C  C   F  K +L  H  + ++ K
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.4 bits (86), Expect = 5e-04
 Identities = 16/47 (34%), Positives = 24/47 (51%)

Query: 471 CDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           C+ CG        +KKH   H+  RP+ C  C  ++K + NL +H K
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C++C   F H +SL  H   HS  K    
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  + EK YVC+ CG  F   + LV H   H+  K    
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T +K + C  CG  F  K +LV H   H+  K    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y CE CG  FIH S L  H   H+  K    
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F  KS L  H   H+  +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T  K Y C  C   F  KS L+ H  +H+ VK    
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C +CG  F H+ SL  H   HS  K    
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
             +  T ++ Y C  CG  F  KSSL+ H  +H
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  + EK Y C  CG  F  KS L AH  TH+  K    
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
             +  T  K YVC  CG  F  KS L+ HT TH
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F  +S+L  H   H+  K    
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F  +SSL  H   H+  K    
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCD 442
             +  + EK + CE CG  F   S   +H  +HS  K     
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK 438
             +  + EK + C+ CG  F + S+L  H   H   K
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  C   F  KS+L+ H  TH+       
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
                  EK Y CE CGA F+  + L AH   H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK + C  CG  F  +S+L  H   H+  K    
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T  K + C  CG  F  KS+L  H   H+  K    
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  + E+ Y C  CG  F   S L+ H   H   K    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS 435
             +  T E  Y C  CG  F  K  LV+H  THS
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C+ CG  F   S L+ H   HS  K    
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F  KS L  H  +H+  +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +    EK Y C  CG  F  KS L+ H  THS  K    
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK 438
             +  T EK + C+ CG  F    SL  H  +H    
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
             +  + E+PF CK CG+ + W  +L +H +
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR 33

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T  K Y+C  CG  F   SSL  H   H+  K    
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C+ CG  F     L+ H   HS  K    
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK   C  CG  F  KS L+ H  TH + K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
             +  T EK Y C +CG  F  KS L  H   H
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
             +  T EK Y C  CG  FI KS L  H   H
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F H S L  H   H+  K    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCD 442
             +  + EK Y C  CG  +  +  L  H   H+  K     
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
             +  T E  Y C  CG  F  K  L++H  TH
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +    +K + C  C   F   SSL  H   H+  K    
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 401 EHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
              +  + EK + CE CG  F   S L +H   H+  K    
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +    EK Y C++CG  F   S L  H   H+  K    
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y+C  CG  FI KS L  H   H+  K    
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  + EK Y CE CG  +  + +L  H   H   K    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F   S L  H   H+  K    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/33 (33%), Positives = 12/33 (36%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
             +    EK Y C  CG  F     L  H  TH
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 401 EHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
              +  T EK Y C++CG  F   S LV H + HS  +    
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F   SS   H   H+  +    
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y CE CG  +  K +L  H   H+  +    
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK + C  CG  F   S L  H   H+  K    
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F   S+L  H   H+  K    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS 435
                  E  Y+C  CG  F  + SL  H  + S
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  + EK + CE CG  F   S L +H   H+  K    
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C++C   F  K+ L  H  TH+  K    
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T  K Y C  CG  F   S L  H   H+  K    
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
             +    E+ + C  CG +F+  S+ + H   H
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK + C  CG  F   S L+ H   H+       
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 401 EHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKCD 442
              +  T EK Y C +CG  F+  + L  H   H+        
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F  K++L  H   H+  K    
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 404 NIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
           +  + E  Y C  CG  F  K  L++H  TH+       
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 9/41 (21%), Positives = 12/41 (29%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +       Y C  C   F  K  L+ H   H+  K    
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK Y C  CG  F   S LV H   H+  K    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK+Y C  CG  F   S L  H   H+  K    
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  T EK + C  CG  F     L  H   H+  K    
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAH 430
             +  T +K Y C  CG  FI  +SL+ H
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK-FKC 441
             +  + E+ + C  CG  F  +S L  H   HS  K    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.1 bits (84), Expect = 9e-04
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHS 435
            + EK Y C  C   F   + LV H   H+
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHT 34

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	555
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.73
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.72
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.71
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.69
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.68
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.65
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.64
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.63
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.63
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.58
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.58
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.58
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.57
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.56
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.55
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.55
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.54
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.52
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.52
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.5
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.5
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.49
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.47
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.47
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.46
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.46
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.45
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.45
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.42
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.42
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.42
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.4
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.39
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.38
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.38
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.38
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.37
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.37
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.33
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.32
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.32
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.31
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.3
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.29
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.28
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.28
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.24
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.22
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.22
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.19
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.18
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.15
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.15
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.13
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.11
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.03
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.03
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.01
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.01
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.0
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.98
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.97
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.97
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.96
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.93
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.93
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.93
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.91
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.9
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.9
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.9
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.85
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.84
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.82
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.82
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.81
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.8
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.8
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.78
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.77
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.76
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.74
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.74
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.73
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.72
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.71
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.71
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.7
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.67
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.65
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.64
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.59
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.56
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.52
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.49
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.45
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.44
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.42
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.42
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.41
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.41
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.35
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.35
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.3
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.25
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.24
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.21
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.2
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.13
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.12
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.12
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.1
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.1
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.1
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.09
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.08
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.08
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.07
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.06
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.03
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.29
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.02
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.02
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.02
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.02
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.02
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.27
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.27
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.01
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.0
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.0
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.98
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.95
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.93
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.14
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.9
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.89
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.88
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.88
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.86
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.85
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.83
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.03
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.99
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.64
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.58
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.29
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.87
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.66
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.19
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.92
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.63
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.76
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.64
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.54
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.4
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.34
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	85.77
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	82.92
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	82.39
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	80.13

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.1e-35  Score=271.29  Aligned_cols=143  Identities=32%  Similarity=0.649  Sum_probs=126.9

Q ss_pred             CcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHHHHh
Q psy11590        381 TMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHIS  459 (555)
Q Consensus       381 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~  459 (555)
                      +++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|.+. +|.|++|++.|.+...|..|++
T Consensus        47 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  126 (190)
T 2i13_A           47 EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR  126 (190)
T ss_dssp             -CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH
Confidence            346889999999999999999999999999999999999999999999999998876 8999999999999999999999


Q ss_pred             hhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCcccc
Q psy11590        460 TVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKC  525 (555)
Q Consensus       460 ~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  525 (555)
                      . |.++ ++|.|++|++.|.+...|..|+++|++++||.|++|++.|.++..|..|+++|+|++||
T Consensus       127 ~-h~~~-~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          127 T-HTGE-KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             H-HHCC-CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             H-hCCC-CCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            8 5555 89999999999999999999999999999999999999999999999999999999986

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.3e-34  Score=264.06  Aligned_cols=181  Identities=30%  Similarity=0.619  Sum_probs=132.5

Q ss_pred             chhhhhhccccCCceeecCccCccccchhhhhhhhhhcC-CCcccCCCCCccCCCchHHHhHHHhhcCCCCCCCCccccc
Q psy11590        189 NLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHD-DRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAV  267 (555)
Q Consensus       189 ~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~h~~~~~~~~~~  267 (555)
                      .|..|++++ .++++|.|++|++.|.+...|..|++.|. +++|.|++|++.|.+...|..|++.+              
T Consensus         8 ~l~~h~~~~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h--------------   72 (190)
T 2i13_A            8 SSVAQAALE-PGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTH--------------   72 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHH--------------
T ss_pred             cchhhhhhc-CCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhc--------------
Confidence            455555555 67778888888888888888888888876 67788888888888888777777651              


Q ss_pred             ccccCceeeCCCcccccccccccccCCCCCCcccccccccchhhccccccccccCccCccccChhHHhHHHHhhhccccc
Q psy11590        268 KSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLA  347 (555)
Q Consensus       268 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~c~~~~~~~~~~~~l~~h~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  347 (555)
                                                                                                      
T Consensus        73 --------------------------------------------------------------------------------   72 (190)
T 2i13_A           73 --------------------------------------------------------------------------------   72 (190)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCchhhhhHHHHhhhhHhHHHHHHhhhcCCcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHH
Q psy11590        348 FSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSL  427 (555)
Q Consensus       348 ~~~~~~~~~~~~~~c~~~~~~~l~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L  427 (555)
                                                     .++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|
T Consensus        73 -------------------------------~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  121 (190)
T 2i13_A           73 -------------------------------TGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL  121 (190)
T ss_dssp             -------------------------------HCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHH
T ss_pred             -------------------------------CCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHH
Confidence                                           1234689999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCC-CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCe
Q psy11590        428 VAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPF  497 (555)
Q Consensus       428 ~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  497 (555)
                      ..|+++|+++ ||.|++|++.|.+...|..|+++ |.++ +||.|++|++.|.+...|..|+++|+|++||
T Consensus       122 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~-~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT-HTGE-KPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-HHCC-CCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHh-cCCC-CCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            9999999876 99999999999999999999999 5555 8999999999999999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=7.3e-29  Score=225.92  Aligned_cols=139  Identities=24%  Similarity=0.555  Sum_probs=123.7

Q ss_pred             cCCcceec--CCCcccccCHHHHHHHHhhccCCCccccc--cccccccCHHHHHHHH-HhcC-CC-CccC--CCChhhcC
Q psy11590        379 EDTMRYQC--PHCPSLLKTFWTLKEHFNIHTSEKKYVCE--LCGAYFIHKSSLVAHT-TTHS-NV-KFKC--DFCEKVYS  449 (555)
Q Consensus       379 ~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~-~~H~-~~-~~~C--~~C~~~f~  449 (555)
                      .++++|.|  +.|++.|.+...|..|+++|+++++|.|+  .|++.|.+...|..|+ ..|. +. +|.|  +.|++.|.
T Consensus        38 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~  117 (190)
T 1tf6_A           38 TGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFK  117 (190)
T ss_dssp             HCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECS
T ss_pred             CCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccC
Confidence            34567888  88999999999999999999999999999  8999999999999999 6663 33 8999  88999999


Q ss_pred             ChHHHHHHHhhhcCCCcccccccc--chhcccCchHHHHHHHhcCCCCCeeccc---ccccccChhhHHHHHHhCCCc
Q psy11590        450 HRNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTERPFVCKL---CGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       450 ~~~~L~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~---C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      +...|..|+++ |.++ +||.|++  |++.|.+...|..|+++|+|   |.|.+   |++.|.+...|..|+++|+|+
T Consensus       118 ~~~~L~~H~~~-H~~~-~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          118 KHNQLKVHQFS-HTQQ-LPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             SHHHHHHHHGG-GSSS-CSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             CHHHHHHHHHH-hCCC-CCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            99999999998 6666 8999988  99999999999999999988   89999   999999999999999999875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=1.1e-28  Score=224.77  Aligned_cols=167  Identities=25%  Similarity=0.488  Sum_probs=147.7

Q ss_pred             hcCCcceec--CCCcccccCHHHHHHHHhhccCCCcccc--ccccccccCHHHHHHHHHhcCCC-CccCC--CChhhcCC
Q psy11590        378 VEDTMRYQC--PHCPSLLKTFWTLKEHFNIHTSEKKYVC--ELCGAYFIHKSSLVAHTTTHSNV-KFKCD--FCEKVYSH  450 (555)
Q Consensus       378 ~~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~-~~~C~--~C~~~f~~  450 (555)
                      ..+.++|.|  +.|++.|.+...|..|+++|+++++|.|  +.|++.|.+...|..|+++|.++ +|.|+  .|++.|.+
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            345678999  7899999999999999999999999999  88999999999999999999986 99999  89999999


Q ss_pred             hHHHHHHHhhhcCCCcccccc--ccchhcccCchHHHHHHHhcCCCCCeeccc--ccccccChhhHHHHHHhCCCccccC
Q psy11590        451 RNRLRYHISTVHENKWKSAAC--DICGRVFLDSKNMKKHAAVHSTERPFVCKL--CGIAYKWRKNLVRHQKNCKASAKCS  526 (555)
Q Consensus       451 ~~~L~~H~~~~H~~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~  526 (555)
                      ...|..|++..|....++|.|  ++||+.|.+...|..|+++|++++||+|++  |++.|.+.+.|..|+++|+|   |.
T Consensus        87 ~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~  163 (190)
T 1tf6_A           87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YP  163 (190)
T ss_dssp             HHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CC
T ss_pred             HHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---Cc
Confidence            999999996668543389999  899999999999999999999999999988  99999999999999999999   77


Q ss_pred             ccc---CCCC--ccccccceeeecCC
Q psy11590        527 LMT---TSPL--SVKFAMPHTRFDGG  547 (555)
Q Consensus       527 ~~~---~~~~--~~~~~~~~~~~~~~  547 (555)
                      |+.   |...  +...+..|.+.+.|
T Consensus       164 C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          164 CKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             CCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             CCCCCcCCCccccHHHHHHHHHhhcC
Confidence            887   7655  44455566665544

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=9.1e-27  Score=204.64  Aligned_cols=138  Identities=31%  Similarity=0.597  Sum_probs=129.3

Q ss_pred             cceecCCCcccccCHHHHHHHHh---hccCCCccccccc-----cccccCHHHHHHHHHhcCCC-CccCCC--ChhhcCC
Q psy11590        382 MRYQCPHCPSLLKTFWTLKEHFN---IHTSEKKYVCELC-----GAYFIHKSSLVAHTTTHSNV-KFKCDF--CEKVYSH  450 (555)
Q Consensus       382 ~~~~C~~C~~~f~~~~~L~~H~~---~H~~~~~~~C~~C-----~~~f~~~~~L~~H~~~H~~~-~~~C~~--C~~~f~~  450 (555)
                      .+|.|+.|++.|.+...|..|++   +|.++++|.|++|     ++.|.+...|..|+++|++. ||.|++  |++.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            46899999999999999999998   7889999998753     49999999999999999886 999985  9999999


Q ss_pred             hHHHHHHHhhhcCCCcccccccc--chhcccCchHHHHHH-HhcCCCCCeeccc--ccccccChhhHHHHHHhCCC
Q psy11590        451 RNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHA-AVHSTERPFVCKL--CGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       451 ~~~L~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~-~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  521 (555)
                      ...|..|++. |.++ ++|.|++  |++.|.+...|..|+ ++|++++||.|++  |++.|.+.+.|..|+++|+|
T Consensus        82 ~~~l~~H~~~-h~~~-~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           82 LENLKTHLRS-HTGE-KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHHH-TTTC-CCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHH-cCCC-CCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999999999 6666 8999999  999999999999998 8999999999999  99999999999999999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=6.2e-25  Score=192.88  Aligned_cols=107  Identities=24%  Similarity=0.524  Sum_probs=94.1

Q ss_pred             cCCCcccccCHHHHHHHHhhccCCCcccccc--ccccccCHHHHHHHHHhcCCC-CccCCC--ChhhcCChHHHHHHHhh
Q psy11590        386 CPHCPSLLKTFWTLKEHFNIHTSEKKYVCEL--CGAYFIHKSSLVAHTTTHSNV-KFKCDF--CEKVYSHRNRLRYHIST  460 (555)
Q Consensus       386 C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~-~~~C~~--C~~~f~~~~~L~~H~~~  460 (555)
                      |+.|++.|.+...|..|+++|++++||.|++  |++.|.+...|..|+++|+++ ||.|++  |++.|.+...|..|++.
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            5566788999999999999999999999985  999999999999999999876 899998  99999999999999854


Q ss_pred             hcCCCcccccccc--chhcccCchHHHHHHHhcCC
Q psy11590        461 VHENKWKSAACDI--CGRVFLDSKNMKKHAAVHST  493 (555)
Q Consensus       461 ~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~  493 (555)
                      .|.++ ++|.|++  |++.|.++..|..|+++|+|
T Consensus       122 ~H~~~-~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          122 THSNE-KPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCSC-CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             hcCCC-CCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            47777 8999988  99999999999999998875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=1.7e-23  Score=176.22  Aligned_cols=113  Identities=23%  Similarity=0.506  Sum_probs=84.2

Q ss_pred             CCCccccccccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHHHHhhh--cCCCccccccccchhcccCchHH
Q psy11590        408 SEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHISTV--HENKWKSAACDICGRVFLDSKNM  484 (555)
Q Consensus       408 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~~--H~~~~~~~~C~~C~k~f~~~~~L  484 (555)
                      ++++|.|++|++.|.+...|..|+++|.++ +|.|++|++.|.+...|..|++.+  +.++ ++|.|++|++.|.+...|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~-~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE-QVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCC-CCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCC-CCeECCCCCCccCCHHHH
Confidence            455566666666666666666666666554 666666666666666666666653  3444 789999999999999999


Q ss_pred             HHHHHhcCCCCCeecccccccccChhhHHHHHHhCCC
Q psy11590        485 KKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       485 ~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      ..|+++|++++||.|++|++.|.+...|..|++..|+
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            9999999999999999999999999999999885443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=2.1e-23  Score=175.67  Aligned_cols=115  Identities=25%  Similarity=0.523  Sum_probs=82.3

Q ss_pred             CCccccc--cccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHHHHHhhhcCCCcccccccc--chhcccCchHH
Q psy11590        409 EKKYVCE--LCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNM  484 (555)
Q Consensus       409 ~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L  484 (555)
                      +++|.|+  .|++.|.+...|..|+++|...+|.|++|++.|.+...|..|++. |.++ ++|.|++  |++.|.+...|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLV-HTGE-KPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGG-TSCC-CCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHH-cCCC-CCeeCCCCCCcCccCCHHHH
Confidence            4567776  677777777777777777744477777777777777777777776 5555 7788875  88888888888


Q ss_pred             HHHHHhcCCCCCeecc--cccccccChhhHHHHHHhCCCcccc
Q psy11590        485 KKHAAVHSTERPFVCK--LCGIAYKWRKNLVRHQKNCKASAKC  525 (555)
Q Consensus       485 ~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~  525 (555)
                      ..|+++|++++||.|+  .|++.|.+.+.|..|+++|++++|+
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            8888888888888885  4888888888888888888887765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=3e-23  Score=182.02  Aligned_cols=117  Identities=25%  Similarity=0.444  Sum_probs=93.2

Q ss_pred             CccccccccccccCHHHHHHHHHh-cCCC---------CccCCCChhhcCChHHHHHHHhhhcCCCcccccccc--chhc
Q psy11590        410 KKYVCELCGAYFIHKSSLVAHTTT-HSNV---------KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDI--CGRV  477 (555)
Q Consensus       410 ~~~~C~~C~~~f~~~~~L~~H~~~-H~~~---------~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~--C~k~  477 (555)
                      .+|.|+.|++.|.+...|..|++. |.+.         +|.|++|++.|.+...|..|++. |.++ ++|.|++  |++.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~~~C~~~  101 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV-HTGE-KPFPCPFPGCGKI  101 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHH-HHCC-CSEECSCTTTCCE
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHh-cCCC-CcccCCcCCCCCc
Confidence            344444444444444444444443 3322         38899999999999999999998 5555 8999998  9999


Q ss_pred             ccCchHHHHHHHhcCCCCCeeccc--ccccccChhhHHHHHHhCCCccccCcc
Q psy11590        478 FLDSKNMKKHAAVHSTERPFVCKL--CGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       478 f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      |.+...|..|+++|++++||.|++  |++.|.+...|..|+++|++++||.|+
T Consensus       102 f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999999999999997  999999999999999999999999885

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=4.3e-23  Score=172.35  Aligned_cols=111  Identities=29%  Similarity=0.671  Sum_probs=90.1

Q ss_pred             cCCCcccccc--ccccccCHHHHHHHHHhcCCC-CccCC--CChhhcCChHHHHHHHhhhcCCCccccccccchhcccCc
Q psy11590        407 TSEKKYVCEL--CGAYFIHKSSLVAHTTTHSNV-KFKCD--FCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDS  481 (555)
Q Consensus       407 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~-~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~  481 (555)
                      +++++|.|++  |++.|.+...|..|+++|.+. +|.|+  .|++.|.+...|..|++. |.++ ++|.|++|++.|.+.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~   79 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-HTGV-KPFQCKTCQRKFSRS   79 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-HHCC-CCEECTTTCCEESCH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHH-cCCC-CCccCCccCchhCCH
Confidence            4567777775  777777777777777777665 77887  688888888888888887 4444 788999999999999


Q ss_pred             hHHHHHHHhcCCCCCeec--ccccccccChhhHHHHHHhC
Q psy11590        482 KNMKKHAAVHSTERPFVC--KLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       482 ~~L~~H~~~H~~~~~~~C--~~C~~~f~~~~~L~~H~~~h  519 (555)
                      ..|..|+++|++++||.|  +.|++.|.+...|..|+++|
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           80 DHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999999  78999999999999998876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=2.2e-23  Score=176.32  Aligned_cols=90  Identities=30%  Similarity=0.590  Sum_probs=52.9

Q ss_pred             HHhhhcCCcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChH
Q psy11590        374 CRIIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRN  452 (555)
Q Consensus       374 ~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~  452 (555)
                      +..+++|+++|.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|+++|+++ ||.|++|++.|.+..
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            4445556666666666666666666666666666666666666666666666666666555544 555555555555555


Q ss_pred             HHHHHHhhhcC
Q psy11590        453 RLRYHISTVHE  463 (555)
Q Consensus       453 ~L~~H~~~~H~  463 (555)
                      .|..|++++|+
T Consensus        93 ~L~~H~~~hh~  103 (133)
T 2lt7_A           93 FMSSHIKSVHS  103 (133)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHhHHhcC
Confidence            55555555443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=2.4e-22  Score=169.10  Aligned_cols=115  Identities=27%  Similarity=0.634  Sum_probs=105.8

Q ss_pred             cCCcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhc---CCC-CccCCCChhhcCChHHH
Q psy11590        379 EDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH---SNV-KFKCDFCEKVYSHRNRL  454 (555)
Q Consensus       379 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H---~~~-~~~C~~C~~~f~~~~~L  454 (555)
                      +++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+..|   .+. +|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            46778999999999999999999999999999999999999999999999999964   444 99999999999999999


Q ss_pred             HHHHhhhcCCCccccccccchhcccCchHHHHHHH-hcCCCC
Q psy11590        455 RYHISTVHENKWKSAACDICGRVFLDSKNMKKHAA-VHSTER  495 (555)
Q Consensus       455 ~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~  495 (555)
                      ..|++. |.++ +||.|++|++.|.+...|..|++ .|.++.
T Consensus        83 ~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVS-HTGE-MPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHH-HSSS-CSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHH-cCCC-CCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            999999 6666 89999999999999999999997 577654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=1.7e-22  Score=169.95  Aligned_cols=115  Identities=28%  Similarity=0.613  Sum_probs=101.6

Q ss_pred             CcceecC--CCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC-CccCCC--ChhhcCChHHHH
Q psy11590        381 TMRYQCP--HCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDF--CEKVYSHRNRLR  455 (555)
Q Consensus       381 ~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~--C~~~f~~~~~L~  455 (555)
                      +++|.|+  .|++.|.+...|..|+++| ++++|.|++|++.|.+...|..|+++|+++ +|.|++  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            5679999  8999999999999999999 889999999999999999999999999987 999986  999999999999


Q ss_pred             HHHhhhcCCCccccccc--cchhcccCchHHHHHHHhcCCCCCee
Q psy11590        456 YHISTVHENKWKSAACD--ICGRVFLDSKNMKKHAAVHSTERPFV  498 (555)
Q Consensus       456 ~H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~  498 (555)
                      .|++. |.++ ++|.|+  .|++.|.+...|..|+++|+++++++
T Consensus        82 ~H~~~-h~~~-~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           82 THVRI-HTGD-RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHH-HHCC-CCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHH-hCCC-CceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            99999 5555 899996  59999999999999999999998864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=1.9e-22  Score=176.96  Aligned_cols=120  Identities=28%  Similarity=0.538  Sum_probs=111.4

Q ss_pred             cCCcceecCCCcccccCHHHHHHHHhh-ccCCCc--------cccccccccccCHHHHHHHHHhcCCC-CccCCC--Chh
Q psy11590        379 EDTMRYQCPHCPSLLKTFWTLKEHFNI-HTSEKK--------YVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDF--CEK  446 (555)
Q Consensus       379 ~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~--------~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~--C~~  446 (555)
                      .+..+|.|+.|++.|.+...|..|++. |.+..+        |.|++|++.|.+...|..|+++|+++ +|.|++  |++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            456679999999999999999999997 777655        89999999999999999999999886 999998  999


Q ss_pred             hcCChHHHHHHHhhhcCCCcccccccc--chhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        447 VYSHRNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       447 ~f~~~~~L~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      .|.+...|..|+++ |.++ ++|.|++  |++.|.+...|..|+++|++++||.|.
T Consensus       101 ~f~~~~~L~~H~~~-h~~~-~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          101 IFARSENLKIHKRT-HTGE-KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             EESCHHHHHHHHTT-TCSS-CSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCHHHHHHHHHh-hCCC-CCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            99999999999998 6666 8999997  999999999999999999999999996

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=7.2e-23  Score=173.09  Aligned_cols=108  Identities=22%  Similarity=0.406  Sum_probs=99.3

Q ss_pred             HHHhhccCCCccccccccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhccc
Q psy11590        401 EHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFL  479 (555)
Q Consensus       401 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~  479 (555)
                      .|.++|.|+++|.|++|++.|.+...|..|+++|+++ ||.|++|++.|.+...|..|+++ |.++ +||.|++||+.|.
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~C~k~F~   89 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH-HTGE-RRYQCLACGKSFI   89 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH-HHTC-CCEEESSSCCEES
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc-cCCC-ccccCCCCCCCcC
Confidence            3456899999999999999999999999999999887 99999999999999999999998 7777 9999999999999


Q ss_pred             CchHHHHHHHhcCCCC------CeecccccccccChh
Q psy11590        480 DSKNMKKHAAVHSTER------PFVCKLCGIAYKWRK  510 (555)
Q Consensus       480 ~~~~L~~H~~~H~~~~------~~~C~~C~~~f~~~~  510 (555)
                      +...|..|+++|++++      +|+|.+|++.|....
T Consensus        90 ~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           90 NYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             SHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             CHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence            9999999999998764      599999999887543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=3.2e-22  Score=167.00  Aligned_cols=111  Identities=28%  Similarity=0.597  Sum_probs=104.8

Q ss_pred             cCCcceecCC--CcccccCHHHHHHHHhhccCCCccccc--cccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHH
Q psy11590        379 EDTMRYQCPH--CPSLLKTFWTLKEHFNIHTSEKKYVCE--LCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNR  453 (555)
Q Consensus       379 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~  453 (555)
                      +++++|.|++  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|+++|++. +|.|++|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4677899997  999999999999999999999999999  7999999999999999999876 9999999999999999


Q ss_pred             HHHHHhhhcCCCcccccc--ccchhcccCchHHHHHHHhc
Q psy11590        454 LRYHISTVHENKWKSAAC--DICGRVFLDSKNMKKHAAVH  491 (555)
Q Consensus       454 L~~H~~~~H~~~~~~~~C--~~C~k~f~~~~~L~~H~~~H  491 (555)
                      |..|+++ |.++ ++|.|  ++||+.|.+...|..|+++|
T Consensus        82 l~~H~~~-h~~~-~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRT-HTGE-KPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHH-HHTC-CCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHH-hcCC-CCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999 5555 89999  89999999999999999987

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.77  E-value=7.9e-19  Score=142.98  Aligned_cols=88  Identities=27%  Similarity=0.652  Sum_probs=77.6

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHH
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK  517 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  517 (555)
                      +|.|++|++.|.+...|..|++. |.++ ++|.|++|++.|.+...|..|+++|+++++|+|.+|++.|.+...|..|++
T Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           17 EFICKFCGRHFTKSYNLLIHERT-HTDE-RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHHH-HCCS-CCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             CeECCCCCCccCCHHHHHHHHHH-cCCC-CCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            78888888888888888888888 5555 889999999999999999999999999999999999999999999999999


Q ss_pred             hCCCccccCc
Q psy11590        518 NCKASAKCSL  527 (555)
Q Consensus       518 ~h~~~~~~~~  527 (555)
                      +|++++||..
T Consensus        95 ~H~~~~~~~~  104 (106)
T 2ee8_A           95 LHMQTSSPTA  104 (106)
T ss_dssp             HTTSCCCCCC
T ss_pred             HhCCCCCCcC
Confidence            9999988754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1e-18  Score=139.43  Aligned_cols=86  Identities=30%  Similarity=0.642  Sum_probs=76.5

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHH
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK  517 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  517 (555)
                      ||.|++|++.|.+...|..|++. |.++ ++|.|++|++.|.+...|..|+++|+++++|+|++|++.|.+...|..|++
T Consensus         8 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   85 (96)
T 2dmd_A            8 PHKCEVCGKCFSRKDKLKTHMRC-HTGV-KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR   85 (96)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGG-CCCC-CSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHT
T ss_pred             CeECCCCCCccCCHHHHHHHHHh-cCCC-CCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHH
Confidence            88888888888888888888887 5555 889999999999999999999999999999999999999999999999999


Q ss_pred             hCCCcccc
Q psy11590        518 NCKASAKC  525 (555)
Q Consensus       518 ~h~~~~~~  525 (555)
                      +|+++++.
T Consensus        86 ~h~~~~~p   93 (96)
T 2dmd_A           86 SHTGDSGP   93 (96)
T ss_dssp             TCCSCCCC
T ss_pred             HhcCCCCC
Confidence            99988753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=7.4e-19  Score=135.78  Aligned_cols=82  Identities=30%  Similarity=0.765  Sum_probs=74.6

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHH
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK  517 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  517 (555)
                      ||.|++|++.|.+...|..|++. |.++ ++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+..+|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLI-HSDT-RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH-HHTC-CCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHH-cCCC-CCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            68899999999999999999998 5555 899999999999999999999999999999999999999999999999999


Q ss_pred             hCCC
Q psy11590        518 NCKA  521 (555)
Q Consensus       518 ~h~~  521 (555)
                      +|+|
T Consensus        79 ~H~g   82 (82)
T 2kmk_A           79 KHTG   82 (82)
T ss_dssp             HHC-
T ss_pred             hhCC
Confidence            9875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=1.3e-19  Score=150.04  Aligned_cols=100  Identities=15%  Similarity=0.266  Sum_probs=71.0

Q ss_pred             HHHHHHhcCCC-CccCCCChhhcCChHHHHHHHhh--hcCCCccccccccchhcc--cCchHHHHHHHhcCCCCCeeccc
Q psy11590        427 LVAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHIST--VHENKWKSAACDICGRVF--LDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       427 L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~--~H~~~~~~~~C~~C~k~f--~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |..|+++|+++ ||.|++|++.|.+...|..|++.  +.... ..+.|++|++.|  .....|..|+++|++++||.|++
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~-~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~   85 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDD-NHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY   85 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCS-CCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccC-CCccCCCCCcccccccHHHHHHHhhccCCCcceECCC
Confidence            34444444443 55555555555555555555554  22222 345599999888  88899999999999999999999


Q ss_pred             ccccccChhhHHHHHHhCCCccccCc
Q psy11590        502 CGIAYKWRKNLVRHQKNCKASAKCSL  527 (555)
Q Consensus       502 C~~~f~~~~~L~~H~~~h~~~~~~~~  527 (555)
                      |++.|.+...|..|+++|+.......
T Consensus        86 C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           86 CGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             SCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             CCCccCCHHHHHHHHHHhCCcccCCC
Confidence            99999999999999999887765543

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.2e-18  Score=142.02  Aligned_cols=93  Identities=17%  Similarity=0.321  Sum_probs=71.1

Q ss_pred             HHhcCCC-CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccCh
Q psy11590        431 TTTHSNV-KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWR  509 (555)
Q Consensus       431 ~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~  509 (555)
                      +++|.++ +|.|++|++.|.....|..|++. |  . ++|.|++|++.|.....|..|++ |++++||+|++|++.|.+.
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H--~-~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERL-C--R-NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH-H--H-HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHH-C--C-CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCH
Confidence            3445554 67777777777777777777777 4  2 67888888888888888888885 8888888888888888888


Q ss_pred             hhHHHHHH-hCCCccccCcc
Q psy11590        510 KNLVRHQK-NCKASAKCSLM  528 (555)
Q Consensus       510 ~~L~~H~~-~h~~~~~~~~~  528 (555)
                      ..|..|++ .|.+++||.+.
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCCC
Confidence            88888886 77788887664

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.74  E-value=1.6e-18  Score=136.52  Aligned_cols=86  Identities=29%  Similarity=0.623  Sum_probs=72.3

Q ss_pred             CCccCC--CChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHH
Q psy11590        437 VKFKCD--FCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVR  514 (555)
Q Consensus       437 ~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~  514 (555)
                      +||.|+  .|++.|.+...|..|++. |.+. ++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRI-HTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHH-HHCC-CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHH-hCCC-CCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            378887  588888888888888887 5555 789999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCccc
Q psy11590        515 HQKNCKASAK  524 (555)
Q Consensus       515 H~~~h~~~~~  524 (555)
                      |+++|+++++
T Consensus        81 H~~~H~~~k~   90 (90)
T 1a1h_A           81 HTKIHLRQKD   90 (90)
T ss_dssp             HHGGGGC---
T ss_pred             HHHHhcccCC
Confidence            9999988763

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.9e-18  Score=140.87  Aligned_cols=95  Identities=19%  Similarity=0.268  Sum_probs=82.4

Q ss_pred             HHhhccCCCccccccccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCc
Q psy11590        402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDS  481 (555)
Q Consensus       402 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~  481 (555)
                      ++++|+++++|.|++|++.|.+...|..|+++|. .+|.|++|++.|.....|..|+ + |.++ ++|.|++|++.|.+.
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~-~-H~~~-~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHE-S-KCEY-KKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHH-H-HCST-GGGEEGGGTEECSSH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHH-H-cCCC-CCccCccccchhCCH
Confidence            4567888888999999999999999999988883 4899999999999999999998 4 6666 899999999999999


Q ss_pred             hHHHHHHH-hcCCCCCeecc
Q psy11590        482 KNMKKHAA-VHSTERPFVCK  500 (555)
Q Consensus       482 ~~L~~H~~-~H~~~~~~~C~  500 (555)
                      ..|..|++ +|++++||.|.
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCCC
Confidence            99999996 89999998774

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.73  E-value=6.6e-18  Score=137.47  Aligned_cols=89  Identities=28%  Similarity=0.685  Sum_probs=51.5

Q ss_pred             CCccccccccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHH
Q psy11590        409 EKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKH  487 (555)
Q Consensus       409 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H  487 (555)
                      +++|.|++|++.|.+...|..|+++|.+. +|.|++|++.|.+...|..|++. |.++ ++|.|++|++.|.+...|..|
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI-HSKE-KPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGG-SCCC-CTTSCSSSCCCCSSHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHH-hCCC-CCeECCCcCCcccCHHHHHHH
Confidence            34455555555555555555555555443 55555555555555555555555 4344 566666666666666666666


Q ss_pred             HHhcCCCCCeec
Q psy11590        488 AAVHSTERPFVC  499 (555)
Q Consensus       488 ~~~H~~~~~~~C  499 (555)
                      +++|++++||.+
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            666666666643

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=9.1e-18  Score=133.92  Aligned_cols=87  Identities=26%  Similarity=0.558  Sum_probs=44.3

Q ss_pred             CCCccccccccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHH
Q psy11590        408 SEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKK  486 (555)
Q Consensus       408 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~  486 (555)
                      ++++|.|++|++.|.+...|..|+++|.+. +|.|++|++.|.+...|..|++. |.++ ++|.|++|++.|.+...|..
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-HSDE-RPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHH-SCCC-CCEECSSSSCEESSHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHH-hCCC-CCccCCCCCCccCCHHHHHH
Confidence            344444444444444444444444444443 45555555555555555555554 3333 55555555555555555555


Q ss_pred             HHHhcCCCCC
Q psy11590        487 HAAVHSTERP  496 (555)
Q Consensus       487 H~~~H~~~~~  496 (555)
                      |+++|+++++
T Consensus        83 H~~~h~~~~~   92 (96)
T 2dmd_A           83 HLRSHTGDSG   92 (96)
T ss_dssp             HHTTCCSCCC
T ss_pred             HHHHhcCCCC
Confidence            5555555543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=3.9e-18  Score=121.32  Aligned_cols=57  Identities=25%  Similarity=0.595  Sum_probs=54.6

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      |||.|++||+.|...+.|..|+++|+|++||+|++||+.|.+.++|..|+++|+|++
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            899999999999999999999999999999999999999999999999999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.71  E-value=7.4e-18  Score=132.66  Aligned_cols=85  Identities=36%  Similarity=0.758  Sum_probs=49.6

Q ss_pred             CCccccc--cccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHH
Q psy11590        409 EKKYVCE--LCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMK  485 (555)
Q Consensus       409 ~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~  485 (555)
                      ++||.|+  .|++.|.+...|..|+++|.+. +|.|+.|++.|.+...|..|++. |.++ ++|.|++|++.|.+...|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-HTGE-KPFACDICGRKFARSDERK   79 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-HHCC-CCEECTTTCCEESSHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHH-cCCC-CCccCCCCCchhCCHHHHH
Confidence            4455555  3555555555555555555543 56666666666666666666665 3333 5666666666666666666


Q ss_pred             HHHHhcCCCC
Q psy11590        486 KHAAVHSTER  495 (555)
Q Consensus       486 ~H~~~H~~~~  495 (555)
                      .|+++|++++
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            6666666654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=8.4e-19  Score=145.13  Aligned_cols=103  Identities=17%  Similarity=0.184  Sum_probs=87.1

Q ss_pred             HHHHHHHHhhccCCCccccccccccccCHHHHHHHHHh--cCCC-C-ccCCCChhhc--CChHHHHHHHhhhcCCCcccc
Q psy11590        396 FWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTT--HSNV-K-FKCDFCEKVY--SHRNRLRYHISTVHENKWKSA  469 (555)
Q Consensus       396 ~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~--H~~~-~-~~C~~C~~~f--~~~~~L~~H~~~~H~~~~~~~  469 (555)
                      ...|..|+++|++++||.|++|++.|.+...|..|+++  |.+. + +.|++|++.|  .....|..|+++ |.++ +||
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~~-~~~   81 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK-EDAQ-KVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCS-CCCC-SSC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhc-cCCC-cce
Confidence            34577899999999999999999999999999999998  6554 4 4599999988  888999999988 6666 899


Q ss_pred             ccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        470 ACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       470 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      .|++|++.|.+...|..|+++|+.......+
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            9999999999999999999998776655443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=3.4e-17  Score=130.28  Aligned_cols=83  Identities=25%  Similarity=0.607  Sum_probs=65.4

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCC--CCeecccccccccChhhHHHH
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTE--RPFVCKLCGIAYKWRKNLVRH  515 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~--~~~~C~~C~~~f~~~~~L~~H  515 (555)
                      +|.|++|++.|.+...|..|++. |.++ ++|.|++|++.|.+...|..|+++|+++  ++|+|++|++.|.+...|..|
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H   84 (95)
T 2yt9_A            7 GVACEICGKIFRDVYHLNRHKLS-HSGE-KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH   84 (95)
T ss_dssp             CEECSSSCCEESSSHHHHHHHHH-SCSS-CSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred             CeECCCCCCccCChHHHHHHHHh-cCCC-CCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence            77777788888777788888777 5555 7788888888888888888888888876  788888888888888888888


Q ss_pred             HH-hCCCc
Q psy11590        516 QK-NCKAS  522 (555)
Q Consensus       516 ~~-~h~~~  522 (555)
                      ++ .|.++
T Consensus        85 ~~~~H~~~   92 (95)
T 2yt9_A           85 IKQVHSGP   92 (95)
T ss_dssp             HHHTSCCC
T ss_pred             HHHhcCCC
Confidence            86 45543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=5.3e-17  Score=129.17  Aligned_cols=85  Identities=28%  Similarity=0.604  Sum_probs=53.8

Q ss_pred             CCcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCC---CCccCCCChhhcCChHHHHH
Q psy11590        380 DTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSN---VKFKCDFCEKVYSHRNRLRY  456 (555)
Q Consensus       380 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~---~~~~C~~C~~~f~~~~~L~~  456 (555)
                      ++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|++   .+|.|++|++.|.+...|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            455666666666666666666666666666666666666666666666666666654   25666666666666666666


Q ss_pred             HHhhhcCC
Q psy11590        457 HISTVHEN  464 (555)
Q Consensus       457 H~~~~H~~  464 (555)
                      |++..|.+
T Consensus        84 H~~~~H~~   91 (95)
T 2yt9_A           84 HIKQVHSG   91 (95)
T ss_dssp             HHHHTSCC
T ss_pred             HHHHhcCC
Confidence            65544544

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.7e-17  Score=135.97  Aligned_cols=87  Identities=26%  Similarity=0.700  Sum_probs=75.7

Q ss_pred             cCCC-CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhH
Q psy11590        434 HSNV-KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNL  512 (555)
Q Consensus       434 H~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L  512 (555)
                      |+++ +|.| .|++.|.+...|..|++. |.++ ++|.|++|++.|.+...|..|+++|+++++|+|++|++.|.+...|
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSM-HLGL-RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHH-HSCC-CSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHH-cCCC-cCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            4554 7888 788888888888888887 5555 8899999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCcc
Q psy11590        513 VRHQKNCKASA  523 (555)
Q Consensus       513 ~~H~~~h~~~~  523 (555)
                      ..|+++|++..
T Consensus        82 ~~H~~~~~~~~   92 (110)
T 2csh_A           82 HRHVTSCTKSY   92 (110)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHccccc
Confidence            99999998653

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.68  E-value=2.3e-17  Score=127.31  Aligned_cols=77  Identities=32%  Similarity=0.644  Sum_probs=37.5

Q ss_pred             eecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHHHHhh
Q psy11590        384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRYHIST  460 (555)
Q Consensus       384 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~  460 (555)
                      |.|++|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|+++ +|.|++|++.|.+...|..|+++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            455555555555555555555555555555555555555444444444444433 44444444444444444444443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.7e-16  Score=130.02  Aligned_cols=84  Identities=24%  Similarity=0.601  Sum_probs=58.7

Q ss_pred             hcCCcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHH
Q psy11590        378 VEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRY  456 (555)
Q Consensus       378 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~  456 (555)
                      |+++++|.| .|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++ +|.|++|++.|.+...|..
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHH
Confidence            456667777 67777777777777777777777777777777777777777777776655 6677777777777777777


Q ss_pred             HHhhhc
Q psy11590        457 HISTVH  462 (555)
Q Consensus       457 H~~~~H  462 (555)
                      |++.+|
T Consensus        84 H~~~~~   89 (110)
T 2csh_A           84 HVTSCT   89 (110)
T ss_dssp             HHHHHH
T ss_pred             HHHHcc
Confidence            766644

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=1.8e-16  Score=124.34  Aligned_cols=81  Identities=33%  Similarity=0.703  Sum_probs=71.3

Q ss_pred             CccCCC--ChhhcCChHHHHHHHhhhcCCCccccccc--cchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHH
Q psy11590        438 KFKCDF--CEKVYSHRNRLRYHISTVHENKWKSAACD--ICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLV  513 (555)
Q Consensus       438 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  513 (555)
                      +|.|++  |++.|.+...|..|++. |.++ ++|.|+  .|++.|.+...|..|+++|++++||.|++|++.|.....|.
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRT-HTGE-KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTT-SCSS-CCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHh-cCCC-CCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            688888  99999998999999888 6555 889997  59999999999999999999999999999999999999999


Q ss_pred             HHHHhCC
Q psy11590        514 RHQKNCK  520 (555)
Q Consensus       514 ~H~~~h~  520 (555)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9998873

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.64  E-value=3.5e-17  Score=128.13  Aligned_cols=82  Identities=22%  Similarity=0.415  Sum_probs=68.0

Q ss_pred             cceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHHHHHhhh
Q psy11590        382 MRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTV  461 (555)
Q Consensus       382 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~~  461 (555)
                      +||.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|+++|++.+|.|+.|++.|.+...|..|++.+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARL   81 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHH
Confidence            57888888888888888888888888888888888888888888888888888777888888888888888888888876


Q ss_pred             cC
Q psy11590        462 HE  463 (555)
Q Consensus       462 H~  463 (555)
                      |.
T Consensus        82 h~   83 (88)
T 1llm_C           82 KK   83 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.63  E-value=2.1e-16  Score=112.32  Aligned_cols=58  Identities=22%  Similarity=0.399  Sum_probs=52.8

Q ss_pred             CcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCCC
Q psy11590        381 TMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK  438 (555)
Q Consensus       381 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  438 (555)
                      ++||.|++||+.|.....|..|+++|+|++||.|++||+.|.....|..|+++|+++|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            5789999999999999999999999999999999999999999999999999998874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.63  E-value=2.9e-16  Score=126.14  Aligned_cols=82  Identities=29%  Similarity=0.658  Sum_probs=69.8

Q ss_pred             CccCCC--ChhhcCChHHHHHHHhhhcCCCccccccc--cchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHH
Q psy11590        438 KFKCDF--CEKVYSHRNRLRYHISTVHENKWKSAACD--ICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLV  513 (555)
Q Consensus       438 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  513 (555)
                      +|.|++  |++.|.+...|..|++. |.++ ++|.|+  .|++.|.+...|..|+++|++++||+|++|++.|.+...|.
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRT-HTGE-KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHH-HSCC-CCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHH-hCCC-CCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            688886  88888888888888887 5555 788886  59999999999999998899999999999999999999999


Q ss_pred             HHHHhCCC
Q psy11590        514 RHQKNCKA  521 (555)
Q Consensus       514 ~H~~~h~~  521 (555)
                      .|+++|.+
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            99988864

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.59  E-value=1e-15  Score=118.81  Aligned_cols=78  Identities=26%  Similarity=0.596  Sum_probs=71.8

Q ss_pred             CccC--CCChhhcCChHHHHHHHhhhcCCCcccccccc--chhcccCchHHHHHHHhcCCCCCeeccc---ccccccChh
Q psy11590        438 KFKC--DFCEKVYSHRNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTERPFVCKL---CGIAYKWRK  510 (555)
Q Consensus       438 ~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~---C~~~f~~~~  510 (555)
                      ||.|  +.|++.|.+...|..|+++ |.++ ++|.|++  |++.|.+...|..|+++|++   |.|++   |++.|...+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFS-HTQQ-LPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH-HHTT-CCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHH-hCCC-CCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHH
Confidence            6889  8899999999999999988 5555 8999988  99999999999999999998   99999   999999999


Q ss_pred             hHHHHHHhCC
Q psy11590        511 NLVRHQKNCK  520 (555)
Q Consensus       511 ~L~~H~~~h~  520 (555)
                      .|..|+++||
T Consensus        76 ~l~~H~~~hh   85 (85)
T 2j7j_A           76 LYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhcC
Confidence            9999999886

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.58  E-value=9.9e-17  Score=125.53  Aligned_cols=80  Identities=30%  Similarity=0.530  Sum_probs=40.7

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHH
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK  517 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  517 (555)
                      ||.|++|++.|.+...|..|+++ |.++ +||.|++|++.|.+...|..|+++|++ .+|.|+.|++.|.+...|..|++
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIRT-HTGE-KPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH-HHCC-CCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHH-cCCC-CCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            44555555555555555555554 3333 455555555555555555555555543 44555555555555555555555


Q ss_pred             hCC
Q psy11590        518 NCK  520 (555)
Q Consensus       518 ~h~  520 (555)
                      .+|
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.58  E-value=2.5e-15  Score=117.73  Aligned_cols=79  Identities=29%  Similarity=0.605  Sum_probs=46.6

Q ss_pred             cceecCC--CcccccCHHHHHHHHhhccCCCccccc--cccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHHH
Q psy11590        382 MRYQCPH--CPSLLKTFWTLKEHFNIHTSEKKYVCE--LCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLRY  456 (555)
Q Consensus       382 ~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~~  456 (555)
                      .+|.|+.  |++.|.+...|..|+++|+++++|.|+  .|++.|.+...|..|+++|+++ +|.|++|++.|.+...|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            3466666  666666666666666666666666664  3666666666666665555544 5555555555555555555


Q ss_pred             HHhh
Q psy11590        457 HIST  460 (555)
Q Consensus       457 H~~~  460 (555)
                      |+++
T Consensus        84 H~~~   87 (89)
T 2wbs_A           84 HMKR   87 (89)
T ss_dssp             HGGG
T ss_pred             HHHh
Confidence            5554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.9e-15  Score=114.79  Aligned_cols=65  Identities=31%  Similarity=0.666  Sum_probs=60.1

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCc
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSL  527 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  527 (555)
                      +.++ ++|.|++|++.|.+...|..|+++|++++||+|++|++.|.....|..|+++|++++||.|
T Consensus        13 ~~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRER-RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCS-CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCC-CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444 8999999999999999999999999999999999999999999999999999999999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.57  E-value=6e-15  Score=118.37  Aligned_cols=80  Identities=28%  Similarity=0.567  Sum_probs=54.7

Q ss_pred             CcceecCC--CcccccCHHHHHHHHhhccCCCccccc--cccccccCHHHHHHHHHhcCCC-CccCCCChhhcCChHHHH
Q psy11590        381 TMRYQCPH--CPSLLKTFWTLKEHFNIHTSEKKYVCE--LCGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHRNRLR  455 (555)
Q Consensus       381 ~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~~~L~  455 (555)
                      .++|.|+.  |++.|.....|..|+++|+++++|.|+  .|++.|.+...|..|+++|+++ +|.|++|++.|.+...|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            45677775  777777777777777777777777774  4777777777777776666654 666666666666666666


Q ss_pred             HHHhh
Q psy11590        456 YHIST  460 (555)
Q Consensus       456 ~H~~~  460 (555)
                      .|+++
T Consensus        93 ~H~~~   97 (100)
T 2ebt_A           93 LHMKR   97 (100)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.56  E-value=3.4e-16  Score=132.16  Aligned_cols=81  Identities=15%  Similarity=0.262  Sum_probs=66.8

Q ss_pred             CccCCCChhhcC------ChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhh
Q psy11590        438 KFKCDFCEKVYS------HRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKN  511 (555)
Q Consensus       438 ~~~C~~C~~~f~------~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~  511 (555)
                      ++.|++|++.|.      ....|..|+ . |.++ +||.|++||+.|.....|..|+++|  ++||.|++|++.|.+...
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~-~-h~~~-~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLL-A-SKAI-SQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHH-H-HHHH-CSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHH
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHH-H-hCCC-CCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHH
Confidence            455555555544      667777777 4 4445 8999999999999999999999999  899999999999999999


Q ss_pred             HHHHHHhCCCcc
Q psy11590        512 LVRHQKNCKASA  523 (555)
Q Consensus       512 L~~H~~~h~~~~  523 (555)
                      |..|+++|+|+-
T Consensus       116 l~~H~~~h~~~~  127 (129)
T 2wbt_A          116 ALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHHHTTCCC
T ss_pred             HHHHHHHHCCcc
Confidence            999999999863

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.55  E-value=3.9e-15  Score=115.47  Aligned_cols=78  Identities=28%  Similarity=0.481  Sum_probs=64.2

Q ss_pred             ceec--CCCcccccCHHHHHHHHhhccCCCcccccc--ccccccCHHHHHHHHHhcCCCCccCCC---ChhhcCChHHHH
Q psy11590        383 RYQC--PHCPSLLKTFWTLKEHFNIHTSEKKYVCEL--CGAYFIHKSSLVAHTTTHSNVKFKCDF---CEKVYSHRNRLR  455 (555)
Q Consensus       383 ~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~C~~---C~~~f~~~~~L~  455 (555)
                      ||.|  +.|++.|.....|..|+++|++++||.|++  |++.|.+...|..|+++|++  |.|+.   |++.|.+...|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHH
Confidence            5788  788888888888888888888888888877  88888888888888888877  88888   888888888888


Q ss_pred             HHHhhhc
Q psy11590        456 YHISTVH  462 (555)
Q Consensus       456 ~H~~~~H  462 (555)
                      .|++.+|
T Consensus        79 ~H~~~hh   85 (85)
T 2j7j_A           79 KHVAECH   85 (85)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhcC
Confidence            8887743

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=2.3e-15  Score=117.10  Aligned_cols=78  Identities=24%  Similarity=0.464  Sum_probs=55.4

Q ss_pred             HHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCC----CCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        454 LRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTE----RPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       454 L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~----~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      |..|+++ |.++ +||.|++|++.|.+...|..|+++|+++    ++|.|.+|++.|.....|..|+++|++++++.|..
T Consensus         3 ~~~H~~~-H~~~-k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            3 SGSSGRT-HTGE-KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTCCSTT-CCCC-CCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cccccce-ecCC-CCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            3456666 5555 7777777777777777777777666554    67777777777777777777777777777777777


Q ss_pred             CCCC
Q psy11590        530 TSPL  533 (555)
Q Consensus       530 ~~~~  533 (555)
                      |.+.
T Consensus        81 ~~~~   84 (86)
T 1x6h_A           81 SGPS   84 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            7654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.54  E-value=5.8e-15  Score=111.16  Aligned_cols=63  Identities=27%  Similarity=0.585  Sum_probs=58.3

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCcccc
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKC  525 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  525 (555)
                      +.++ ++|.|++|++.|.+...|..|+++|++++||+|.+|++.|.....|..|+++|++++||
T Consensus        12 ~~~~-~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSD-KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCC-CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCC-CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3445 89999999999999999999999999999999999999999999999999999999986

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=5.4e-15  Score=112.92  Aligned_cols=68  Identities=34%  Similarity=0.729  Sum_probs=49.0

Q ss_pred             CccCCC--ChhhcCChHHHHHHHhhhcCCCcccccccc--chhcccCchHHHHHHHhcCCCCCeecccccccc
Q psy11590        438 KFKCDF--CEKVYSHRNRLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAY  506 (555)
Q Consensus       438 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f  506 (555)
                      +|.|+.  |++.|.+...|..|++..|.++ ++|.|++  |++.|.++..|..|+++|++++||.|++|++.|
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~-~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ-KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHHHHHHHGGGSC-CCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHHhCCC-CCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            666665  7777777777777777436555 7777777  777777777777777777777777777777776

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=7.5e-15  Score=116.75  Aligned_cols=68  Identities=19%  Similarity=0.255  Sum_probs=58.9

Q ss_pred             cccccccchhcccCchHHHHHHH-hc---CCCCCeecccccccccChhhHHHH-HHhCCCccccCcccCCCCc
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAA-VH---STERPFVCKLCGIAYKWRKNLVRH-QKNCKASAKCSLMTTSPLS  534 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~-~H---~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~~~~~~~~~  534 (555)
                      +||.|++||+.|..++.|..|++ +|   ++++||+|++||+.|..++.|..| +++|.|++||.|..+...+
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~~~   89 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRNN   89 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCCSS
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccCCC
Confidence            88999999999999999999987 58   568899999999999999999999 7899999999998866554

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=4.5e-15  Score=115.43  Aligned_cols=78  Identities=21%  Similarity=0.445  Sum_probs=50.2

Q ss_pred             HHHHhcCCC-CccCCCChhhcCChHHHHHHHhhhcCCC--ccccccccchhcccCchHHHHHHHhcCCCCCeeccccccc
Q psy11590        429 AHTTTHSNV-KFKCDFCEKVYSHRNRLRYHISTVHENK--WKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIA  505 (555)
Q Consensus       429 ~H~~~H~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~  505 (555)
                      .|+++|+++ ||.|++|++.|.....|..|++.+|...  .++|.|++|++.|.+...|..|+++|++++++.|..|+..
T Consensus         5 ~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A            5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             CCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred             cccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCC
Confidence            345555544 5555555555555555555555544331  1567777777777777777777777777777777777765


Q ss_pred             c
Q psy11590        506 Y  506 (555)
Q Consensus       506 f  506 (555)
                      |
T Consensus        85 ~   85 (86)
T 1x6h_A           85 S   85 (86)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=1.9e-15  Score=120.64  Aligned_cols=80  Identities=16%  Similarity=0.227  Sum_probs=68.8

Q ss_pred             hcCChHHHHHHHhhhcCCCccccccccchhccc-CchHHHHHHHhcCC-CCCeecccccccccChhhHHHHHHhCCCccc
Q psy11590        447 VYSHRNRLRYHISTVHENKWKSAACDICGRVFL-DSKNMKKHAAVHST-ERPFVCKLCGIAYKWRKNLVRHQKNCKASAK  524 (555)
Q Consensus       447 ~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~-~~~~L~~H~~~H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  524 (555)
                      .+.....+..|++. |.++ ++|.|++|++.|. ....|..|+++|++ ++||.|.+|++.|.++..|..|+++|++++|
T Consensus         5 s~~~~~~~~~h~~~-h~~~-~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            5 SSGPGGPEEQWQRA-IHER-GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCCSCSHHHHT-TTTT-SCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCCcHHHHHHH-hccC-CCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            34455667788887 6666 8999999999999 99999999999998 9999999999999999999999999999998


Q ss_pred             cCcc
Q psy11590        525 CSLM  528 (555)
Q Consensus       525 ~~~~  528 (555)
                      ....
T Consensus        83 ~~~~   86 (98)
T 2gqj_A           83 SDAE   86 (98)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            5533

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1e-14  Score=108.46  Aligned_cols=64  Identities=23%  Similarity=0.497  Sum_probs=59.4

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCS  526 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  526 (555)
                      |.++ ++|.|++|++.|.+...|..|+++|++++||+|++|++.|.....|..|+++|++++|..
T Consensus         4 ~~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSG-HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCC-CSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCC-CCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            5556 899999999999999999999999999999999999999999999999999999998753

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.7e-14  Score=114.10  Aligned_cols=78  Identities=21%  Similarity=0.281  Sum_probs=66.2

Q ss_pred             hhhcCChHHHHHHHhhhcCCCccccccccchhcc-cCchHHHHHHHhcCCCCCeecccccccccChhhHHHH-HHhCCCc
Q psy11590        445 EKVYSHRNRLRYHISTVHENKWKSAACDICGRVF-LDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRH-QKNCKAS  522 (555)
Q Consensus       445 ~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f-~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~  522 (555)
                      ...|.....|..|.+. |.++ ++|.|++|++.| .+...|..|+++| +++||.|.+|++.|..+..|..| +++|.++
T Consensus        13 ~~~~~~~~~~~~~~~~-~~~~-~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLE-IVDK-GSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCSSCTTCHHHHHHHH-HHHT-SCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCchHHHHHHHH-hcCC-CCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            3466778888888888 4444 899999999999 8999999999999 99999999999999999999999 8888764


Q ss_pred             ccc
Q psy11590        523 AKC  525 (555)
Q Consensus       523 ~~~  525 (555)
                      ..+
T Consensus        90 p~~   92 (96)
T 2ctd_A           90 PSG   92 (96)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            434

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.2e-14  Score=109.46  Aligned_cols=70  Identities=24%  Similarity=0.509  Sum_probs=48.8

Q ss_pred             cCCcceecCC--CcccccCHHHHHHHHh-hccCCCcccccc--ccccccCHHHHHHHHHhcCCC-CccCCCChhhc
Q psy11590        379 EDTMRYQCPH--CPSLLKTFWTLKEHFN-IHTSEKKYVCEL--CGAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVY  448 (555)
Q Consensus       379 ~~~~~~~C~~--C~~~f~~~~~L~~H~~-~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f  448 (555)
                      +++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|+++ ||.|++|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            3455677765  7777777777777776 577777777776  777777777777777776654 67777777666

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.47  E-value=4e-14  Score=100.48  Aligned_cols=56  Identities=30%  Similarity=0.617  Sum_probs=53.0

Q ss_pred             ccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      ||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999999999999999999999999999999999876

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.3e-14  Score=113.02  Aligned_cols=65  Identities=18%  Similarity=0.398  Sum_probs=54.9

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhc---CCCccccccccchhcccCchHHHHH-HHhcCCCCCeeccccc
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVH---ENKWKSAACDICGRVFLDSKNMKKH-AAVHSTERPFVCKLCG  503 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H---~~~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~~~~~C~~C~  503 (555)
                      ||.|+.|++.|.....|..|++..|   .++ +||.|++||+.|..+..|..| +++|+|++||.|.++.
T Consensus        18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~e-kpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLN-SSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             SEECSSCSCEESCHHHHHHHHHHHCSSCCCS-CCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhhCCCCCCC-CCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            7888888888888888888887546   345 889999999999999999999 7899999999998854

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=3.2e-14  Score=106.38  Aligned_cols=62  Identities=31%  Similarity=0.648  Sum_probs=57.1

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccc
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAK  524 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  524 (555)
                      |.++ ++|.|++|++.|.....|..|+++|++++||+|++|++.|.+...|..|+++|+++.+
T Consensus         9 H~~~-k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            9 HSGE-KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TTTC-CCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cCCC-CCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            6666 8999999999999999999999999999999999999999999999999999988764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.46  E-value=3.5e-14  Score=100.79  Aligned_cols=55  Identities=25%  Similarity=0.585  Sum_probs=50.4

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      +||.|++|++.|.+...|..|+++|++++||.|++|++.|.....|..|+++||+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            7899999999999999999999999999999999999999999999999999875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.45  E-value=1.5e-14  Score=122.00  Aligned_cols=112  Identities=17%  Similarity=0.337  Sum_probs=86.4

Q ss_pred             hhcCCcceecCCCcccccCHHHHHHHHh---hccCCCcccccccccccc------CHHHHHHHHHhcCCCCccCCCChhh
Q psy11590        377 IVEDTMRYQCPHCPSLLKTFWTLKEHFN---IHTSEKKYVCELCGAYFI------HKSSLVAHTTTHSNVKFKCDFCEKV  447 (555)
Q Consensus       377 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~---~H~~~~~~~C~~C~~~f~------~~~~L~~H~~~H~~~~~~C~~C~~~  447 (555)
                      .+.+.++|.|...+.....  .+..+.+   ....++++.|++|++.|.      ....|..|+..+..+||.|++|++.
T Consensus         6 ~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~   83 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMP   83 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCE
T ss_pred             hcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcc
Confidence            4567888988776554322  2333322   223457788998887776      6677778875333459999999999


Q ss_pred             cCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCC
Q psy11590        448 YSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       448 f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      |.....|..|+++ |  + +||.|++||+.|.....|..|+++|+|+
T Consensus        84 f~~~~~l~~H~~~-H--~-~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           84 FSSSVSLKQHIRY-T--E-HTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             ESSHHHHHHHHHH-T--C-CCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cCCHhHHHHHHHH-C--C-CCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            9999999999998 5  4 8999999999999999999999999986

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=6.2e-14  Score=107.33  Aligned_cols=57  Identities=21%  Similarity=0.484  Sum_probs=51.5

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHH-hCCCcc
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK-NCKASA  523 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~  523 (555)
                      ++|.|++||+.|.++..|..|+++|++++||.|++|++.|.++.+|..|++ .|.++.
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            789999999999999999999999999999999999999999999999975 465553

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=3.2e-14  Score=113.43  Aligned_cols=79  Identities=13%  Similarity=0.207  Sum_probs=56.3

Q ss_pred             cccCHHHHHHHHHhcCCC-CccCCCChhhcC-ChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCe
Q psy11590        420 YFIHKSSLVAHTTTHSNV-KFKCDFCEKVYS-HRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPF  497 (555)
Q Consensus       420 ~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~-~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  497 (555)
                      ++.....+..|+++|.++ +|.|++|++.|. ....|..|+++++..+ ++|.|++|++.|.++..|..|+++|++++|+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~-~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQ-DALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHH-HHHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCC-CCEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            344455566677777665 777777777777 7777777777744324 7788888888888888888888888887775


Q ss_pred             ec
Q psy11590        498 VC  499 (555)
Q Consensus       498 ~C  499 (555)
                      .-
T Consensus        84 ~~   85 (98)
T 2gqj_A           84 DA   85 (98)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=7e-14  Score=102.54  Aligned_cols=59  Identities=22%  Similarity=0.534  Sum_probs=54.4

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHh-c-CCCCCeecccccccccChhhHHHHHHhCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAV-H-STERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~-H-~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      |.++ +||.|++||+.|.+...|..|+++ | .+++||.|++|++.|.+.+.|..|+++||+
T Consensus         5 h~~~-k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGE-HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEET-TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCC-cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            6666 899999999999999999999988 7 589999999999999999999999999886

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=2.1e-13  Score=103.43  Aligned_cols=64  Identities=31%  Similarity=0.605  Sum_probs=49.2

Q ss_pred             hcCCcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC-CccC
Q psy11590        378 VEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV-KFKC  441 (555)
Q Consensus       378 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~~~C  441 (555)
                      +.++++|.|++|++.|.....|..|+++|++++||.|++|++.|.....|..|+++|+++ ||+|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            345667788888888888888888888887777788888888888777788887777766 7766

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=4.5e-14  Score=107.15  Aligned_cols=67  Identities=25%  Similarity=0.385  Sum_probs=56.6

Q ss_pred             HHHHHhhhcCCCccccccccchhcccCchHHHHHHH-hcCCC-CCeecccccccccChhhHHHHHHhCCCc
Q psy11590        454 LRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAA-VHSTE-RPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       454 L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      |..|+++ |.++ +||.|++|++.|.+...|..|++ .|.++ ++|+|++|++.|.+...|..|++++|+.
T Consensus         3 ~~~H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRT-HSGE-KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCC-CSCC-CSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccc-cCCC-CCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            3457777 6666 89999999999999999999987 67764 8999999999999999999999987754

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2e-13  Score=103.86  Aligned_cols=69  Identities=17%  Similarity=0.401  Sum_probs=59.2

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCC---CCCeecccccccccChhhHHHHHHh-CCCccccCcccCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHST---ERPFVCKLCGIAYKWRKNLVRHQKN-CKASAKCSLMTTS  531 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~---~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~~~~~~  531 (555)
                      |.++ +||.|++|++.|.....|..|+++|++   +++|.|++|++.|.....|..|++. |.+++|.......
T Consensus         2 h~~~-k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~~~   74 (78)
T 2d9h_A            2 SSGS-SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG   74 (78)
T ss_dssp             CCSC-CCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSSSCC
T ss_pred             CCCC-cCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccccCC
Confidence            5666 999999999999999999999999986   8999999999999999999999955 5566665544433

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.9e-13  Score=97.04  Aligned_cols=56  Identities=34%  Similarity=0.772  Sum_probs=51.2

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHH-HhCCCc
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQ-KNCKAS  522 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~  522 (555)
                      +||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            57999999999999999999999999999999999999999999999997 567665

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=3.1e-13  Score=106.87  Aligned_cols=70  Identities=20%  Similarity=0.291  Sum_probs=34.0

Q ss_pred             cCHHHHHHHHHhcCCC-CccCCCChhhc-CChHHHHHHHhhhcCCCccccccccchhcccCchHHHHH-HHhcCCC
Q psy11590        422 IHKSSLVAHTTTHSNV-KFKCDFCEKVY-SHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKH-AAVHSTE  494 (555)
Q Consensus       422 ~~~~~L~~H~~~H~~~-~~~C~~C~~~f-~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H-~~~H~~~  494 (555)
                      .....|..|.+.|.++ +|.|++|++.| .+...|..|+++ | ++ ++|.|++||+.|..+..|..| +++|+++
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~-h-~~-k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           17 AAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMEN-C-KQ-EMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHH-H-CC-CCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHH-H-CC-CCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            3344444444444333 44455555555 455555555554 3 33 555555555555555555555 4555443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=1.7e-13  Score=103.89  Aligned_cols=67  Identities=27%  Similarity=0.567  Sum_probs=48.0

Q ss_pred             HHHHHhhccCCCccccccccccccCHHHHHHHHH-hcCC--CCccCCCChhhcCChHHHHHHHhhhcCCC
Q psy11590        399 LKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTT-THSN--VKFKCDFCEKVYSHRNRLRYHISTVHENK  465 (555)
Q Consensus       399 L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~--~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  465 (555)
                      |.+|+++|++++||.|++|++.|.+...|..|++ .|.+  .+|.|++|++.|.....|..|++.+|+.+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            3457777777777777777777777777777775 5654  36777777777777777777777766654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.38  E-value=4.2e-13  Score=100.85  Aligned_cols=58  Identities=34%  Similarity=0.783  Sum_probs=47.2

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCe
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPF  497 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  497 (555)
                      +|.|+.|++.|.+...|..|++. |.++ ++|.|++|++.|.....|..|+++|++++||
T Consensus        17 ~~~C~~C~k~f~~~~~l~~H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           17 PYKCDRCQASFRYKGNLASHKTV-HTGE-KPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             SBCCTTSSCCBSCHHHHHHHHHH-HCCC-CSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CeECCCCCceeCCHHHHHHHHHH-cCCC-CCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            78888888888888888888877 5555 7888888888888888888888888888876

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=1.8e-13  Score=102.58  Aligned_cols=68  Identities=22%  Similarity=0.547  Sum_probs=59.0

Q ss_pred             HHHHHHHhhhcCCCccccccc--cchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCC
Q psy11590        452 NRLRYHISTVHENKWKSAACD--ICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCK  520 (555)
Q Consensus       452 ~~L~~H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  520 (555)
                      ..|..|+...|.++ ++|.|+  .|++.|.+...|..|+++|++++||.|++||+.|.....|..|+++|+
T Consensus         4 ~~~~~~~~~~~~~~-~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKM-RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCCCCC-CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccCCCC-CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34566777777777 999997  599999999999999999999999999999999999999999999884

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.4e-13  Score=100.75  Aligned_cols=62  Identities=31%  Similarity=0.520  Sum_probs=44.3

Q ss_pred             hhhcCCcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcCCC
Q psy11590        376 IIVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV  437 (555)
Q Consensus       376 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  437 (555)
                      ++|.++++|.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|+++|+++
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            45566677777777777777777777777777777777777777777777777777776654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.33  E-value=9.9e-13  Score=93.13  Aligned_cols=55  Identities=31%  Similarity=0.584  Sum_probs=42.2

Q ss_pred             CcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcC
Q psy11590        381 TMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS  435 (555)
Q Consensus       381 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  435 (555)
                      +++|.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|+++|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4578888888888888888888888888888888888888888888888877765

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=6.3e-15  Score=110.62  Aligned_cols=69  Identities=14%  Similarity=0.298  Sum_probs=47.4

Q ss_pred             HHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        453 RLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       453 ~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|..|++. |.++ +||.|++||+.|.+...|..       +++|.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         5 ~l~~H~~~-h~~~-~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKI-HLGD-RSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCC-CCCC-SEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHH-hCCC-CCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            45556665 5555 67777777777777666665       6677777777777777777777777777777777665

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.32  E-value=1.4e-12  Score=99.71  Aligned_cols=61  Identities=18%  Similarity=0.402  Sum_probs=49.0

Q ss_pred             hhcCCcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHH-HhcCCC
Q psy11590        377 IVEDTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHT-TTHSNV  437 (555)
Q Consensus       377 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~  437 (555)
                      ++...++|.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|+ ++|+++
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3455667888888888888888888888888888888888888888888888886 456553

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.4e-12  Score=96.74  Aligned_cols=57  Identities=23%  Similarity=0.367  Sum_probs=33.5

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCC
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERP  496 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  496 (555)
                      +|.|++|++.|.+...|..|+++ |.++ ++|.|++|++.|.....|..|+++|++++|
T Consensus         9 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            9 PEKCSECSYSCSSKAALRIHERI-HCTD-RPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGG-GCCS-CSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHH-cCCC-CCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            55555555555555555555555 4444 556666666666666666666666665554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.5e-15  Score=110.54  Aligned_cols=36  Identities=14%  Similarity=0.193  Sum_probs=31.9

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      ++|.|++||+.|.....|..|+++|++++||+|++|
T Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           38 KTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            788899999999888899999888988899998887

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=1.4e-12  Score=103.28  Aligned_cols=60  Identities=18%  Similarity=0.258  Sum_probs=40.0

Q ss_pred             cccccchhcccCchHHHHHHHh-cCCCCC--------eecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        469 AACDICGRVFLDSKNMKKHAAV-HSTERP--------FVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       469 ~~C~~C~k~f~~~~~L~~H~~~-H~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      |.|++|++.|.+...|..|+++ |.++++        |.|++|++.|.++..|..|+++|++++||.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5566666666666666666665 666555        66777777777777777777777777777664

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.28  E-value=2.8e-12  Score=90.71  Aligned_cols=56  Identities=25%  Similarity=0.513  Sum_probs=43.3

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      ||.|++|++.|.+...|..|+++ |.++ ++|.|++|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRT-HTDV-RPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH-TSSC-CCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHh-cCCC-CCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57788888888888888888777 5555 77888888888888888888888877765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=2.3e-12  Score=94.32  Aligned_cols=58  Identities=24%  Similarity=0.497  Sum_probs=29.0

Q ss_pred             hcCCcceecCCCcccccCHHHHHHHHhh-c-cCCCccccccccccccCHHHHHHHHHhcC
Q psy11590        378 VEDTMRYQCPHCPSLLKTFWTLKEHFNI-H-TSEKKYVCELCGAYFIHKSSLVAHTTTHS  435 (555)
Q Consensus       378 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~-H-~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  435 (555)
                      |+++++|.|+.|++.|.....|..|++. | .+++||.|+.|++.|.+...|..|+++|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            3444455555555555555555555544 3 34455555555555555555555554443

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.3e-12  Score=94.31  Aligned_cols=57  Identities=23%  Similarity=0.512  Sum_probs=53.7

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecc-cccccccChhhHHHHHHhCCCcccc
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK-LCGIAYKWRKNLVRHQKNCKASAKC  525 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~~~~~~  525 (555)
                      +||.|++|++.|. ...|..|+++ ++++||.|+ .||+.|..++.|..|+++|.+.+|+
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             CCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCcC
Confidence            8999999999999 9999999999 999999999 9999999999999999999888763

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.24  E-value=5.9e-12  Score=99.61  Aligned_cols=62  Identities=19%  Similarity=0.321  Sum_probs=48.5

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCCCccc--------cccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHENKWKS--------AACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~--------~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      .|.|+.|++.|.+...|..|++.+|.++ ++        |.|++|++.|.+...|..|+++|++++||+|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~-~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGG-PEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCC-TTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCC-CCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3567777777777777777776645554 44        89999999999999999999999999999886

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=1.1e-11  Score=88.69  Aligned_cols=54  Identities=33%  Similarity=0.671  Sum_probs=37.4

Q ss_pred             ceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHH-HhcCC
Q psy11590        383 RYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHT-TTHSN  436 (555)
Q Consensus       383 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~  436 (555)
                      ||.|++|++.|.....|..|+++|++++||.|++|++.|.+...|..|+ ++|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            5677777777777777777777777777777777777777777777775 45554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=8.1e-12  Score=94.78  Aligned_cols=56  Identities=30%  Similarity=0.648  Sum_probs=22.8

Q ss_pred             cCCCccccccccccccCHHHHHHHHHhcCC----CCccCCCChhhcCChHHHHHHHhhhc
Q psy11590        407 TSEKKYVCELCGAYFIHKSSLVAHTTTHSN----VKFKCDFCEKVYSHRNRLRYHISTVH  462 (555)
Q Consensus       407 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~----~~~~C~~C~~~f~~~~~L~~H~~~~H  462 (555)
                      ++++||.|++|++.|.+...|..|+++|++    .+|.|++|++.|.....|..|++.+|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            344444444444444444444444444431    13444444444444444444443333

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.19  E-value=5e-12  Score=85.03  Aligned_cols=45  Identities=13%  Similarity=0.372  Sum_probs=38.3

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.9e-12  Score=85.05  Aligned_cols=45  Identities=22%  Similarity=0.483  Sum_probs=37.3

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||+|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            467788888888888888888888888888888888888888766

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.4e-12  Score=84.85  Aligned_cols=45  Identities=16%  Similarity=0.354  Sum_probs=36.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888765

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.7e-12  Score=84.36  Aligned_cols=45  Identities=27%  Similarity=0.549  Sum_probs=38.6

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888888888888888888888888888888888888765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.8e-12  Score=84.35  Aligned_cols=45  Identities=20%  Similarity=0.339  Sum_probs=38.1

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||+|++|++.|.++..|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            377788888888888888888888888888888888888888765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=5.9e-12  Score=83.76  Aligned_cols=44  Identities=23%  Similarity=0.377  Sum_probs=34.5

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      |+++|++++||+|++||+.|.+.+.|..|+++|++++||.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888887765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.1e-12  Score=84.26  Aligned_cols=45  Identities=18%  Similarity=0.419  Sum_probs=37.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|..++.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.8e-12  Score=84.69  Aligned_cols=45  Identities=16%  Similarity=0.388  Sum_probs=35.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||+|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.18  E-value=5.2e-12  Score=84.92  Aligned_cols=45  Identities=13%  Similarity=0.259  Sum_probs=35.6

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||+|++|++.|..++.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            367778888888888888888888888888888888888888765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.6e-12  Score=84.41  Aligned_cols=45  Identities=22%  Similarity=0.519  Sum_probs=37.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++||+.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888776

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=6e-12  Score=84.63  Aligned_cols=45  Identities=18%  Similarity=0.271  Sum_probs=38.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||+|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.1e-12  Score=84.58  Aligned_cols=45  Identities=18%  Similarity=0.440  Sum_probs=37.0

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||+|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788888888888888888888888888888888888888765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.18  E-value=5.4e-12  Score=84.85  Aligned_cols=45  Identities=18%  Similarity=0.356  Sum_probs=36.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467788888888888888888888888888888888888888765

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.18  E-value=5.2e-12  Score=84.94  Aligned_cols=45  Identities=22%  Similarity=0.475  Sum_probs=34.5

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+++.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=6.5e-12  Score=84.45  Aligned_cols=45  Identities=16%  Similarity=0.341  Sum_probs=37.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888776

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.7e-12  Score=84.74  Aligned_cols=45  Identities=20%  Similarity=0.401  Sum_probs=36.5

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+++.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.1e-12  Score=83.97  Aligned_cols=45  Identities=20%  Similarity=0.448  Sum_probs=37.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||+|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            467788888888888888888888888888888888888888776

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.5e-12  Score=84.81  Aligned_cols=45  Identities=20%  Similarity=0.451  Sum_probs=35.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||+|++||+.|.+++.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.8e-12  Score=84.34  Aligned_cols=45  Identities=24%  Similarity=0.451  Sum_probs=35.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||+|++|++.|.+++.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.5e-12  Score=83.85  Aligned_cols=44  Identities=20%  Similarity=0.354  Sum_probs=36.2

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      |+++|++++||+|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67778888888888888888888888888888888888888765

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.3e-12  Score=84.50  Aligned_cols=45  Identities=18%  Similarity=0.401  Sum_probs=34.6

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||+|++|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777777778888888888888888888777777777777765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.5e-12  Score=83.84  Aligned_cols=45  Identities=29%  Similarity=0.541  Sum_probs=37.0

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467788888888888888888888888888888888888888766

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.5e-12  Score=84.12  Aligned_cols=45  Identities=20%  Similarity=0.433  Sum_probs=36.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|.+++.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.8e-12  Score=85.11  Aligned_cols=45  Identities=22%  Similarity=0.406  Sum_probs=36.0

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++||+.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888765

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.1e-12  Score=83.98  Aligned_cols=45  Identities=22%  Similarity=0.409  Sum_probs=36.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788888888888888888888888888888888888888765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=9.5e-12  Score=83.61  Aligned_cols=45  Identities=18%  Similarity=0.422  Sum_probs=37.3

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||+|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888888888888888888888888888888888888766

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1e-11  Score=83.45  Aligned_cols=44  Identities=18%  Similarity=0.409  Sum_probs=35.9

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      |+++|++++||.|++|++.|.+++.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            66778888888888888888888888888888888888888765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.6e-12  Score=84.39  Aligned_cols=45  Identities=22%  Similarity=0.522  Sum_probs=33.0

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||+|++|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777665

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.16  E-value=7.8e-12  Score=84.04  Aligned_cols=44  Identities=23%  Similarity=0.403  Sum_probs=33.4

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      |+++|++++||+|++|++.|.++..|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66777777777777777777777777777777777777777765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.1e-12  Score=84.24  Aligned_cols=45  Identities=22%  Similarity=0.453  Sum_probs=35.7

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.16  E-value=1.1e-11  Score=83.38  Aligned_cols=45  Identities=22%  Similarity=0.581  Sum_probs=37.5

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            467788888888888888888888888888888888888888776

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.4e-12  Score=84.17  Aligned_cols=45  Identities=18%  Similarity=0.375  Sum_probs=36.0

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+++.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.9e-12  Score=84.02  Aligned_cols=45  Identities=20%  Similarity=0.399  Sum_probs=34.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+...|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            366777777888888888888888888888888888888877765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.1e-12  Score=83.71  Aligned_cols=44  Identities=27%  Similarity=0.460  Sum_probs=33.3

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      |+++|++++||.|++|++.|.++..|..|+++|.+++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777777765

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6e-12  Score=84.60  Aligned_cols=45  Identities=29%  Similarity=0.583  Sum_probs=35.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+++.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.2e-12  Score=84.55  Aligned_cols=45  Identities=18%  Similarity=0.357  Sum_probs=34.2

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|...+.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777777777777777777777777777777777777777765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.4e-11  Score=82.82  Aligned_cols=45  Identities=20%  Similarity=0.384  Sum_probs=37.7

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888888888888888888888888888888888888776

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.1e-11  Score=83.39  Aligned_cols=45  Identities=24%  Similarity=0.423  Sum_probs=37.6

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||+|++|++.|.+...|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            367788888888888888888888888888888888888888776

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=2.9e-11  Score=90.30  Aligned_cols=59  Identities=31%  Similarity=0.629  Sum_probs=47.9

Q ss_pred             hhcCCcceecC--CCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhcC
Q psy11590        377 IVEDTMRYQCP--HCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS  435 (555)
Q Consensus       377 ~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  435 (555)
                      .+.++++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45667778886  588888888888888888888888888888888888888888888774

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6.4e-12  Score=84.46  Aligned_cols=45  Identities=24%  Similarity=0.474  Sum_probs=35.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+++.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.2e-11  Score=83.18  Aligned_cols=45  Identities=27%  Similarity=0.449  Sum_probs=38.2

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +|+++|++++||.|++|++.|.+++.|..|+++|++++||.|+.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888888888888888888888888888888888888753

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.8e-12  Score=84.68  Aligned_cols=45  Identities=18%  Similarity=0.440  Sum_probs=34.0

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||+|++|++.|.+++.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366777777777777777777777777777777777777777765

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.8e-12  Score=83.78  Aligned_cols=45  Identities=20%  Similarity=0.405  Sum_probs=35.7

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=1.3e-11  Score=82.85  Aligned_cols=44  Identities=14%  Similarity=0.288  Sum_probs=36.4

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      |+++|++++||.|++|++.|.++..|..|+++|.+++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778888888888888888888888888888888888888765

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.3e-11  Score=82.94  Aligned_cols=45  Identities=18%  Similarity=0.267  Sum_probs=34.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366777778888888888888888888888888888888877765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.13  E-value=3.4e-11  Score=89.70  Aligned_cols=53  Identities=30%  Similarity=0.773  Sum_probs=50.0

Q ss_pred             ccccccc--chhcccCchHHHHHHHhcCCCCCeeccc--ccccccChhhHHHHHHhC
Q psy11590        467 KSAACDI--CGRVFLDSKNMKKHAAVHSTERPFVCKL--CGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       467 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  519 (555)
                      ++|.|.+  |++.|.....|..|+++|++++||+|.+  |++.|.....|..|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            8899988  9999999999999999999999999975  999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=83.25  Aligned_cols=44  Identities=18%  Similarity=0.353  Sum_probs=29.0

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      |+++|++++||+|++|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666654

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.2e-11  Score=82.19  Aligned_cols=45  Identities=18%  Similarity=0.393  Sum_probs=37.3

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHH-hCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK-NCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|.+.+.|..|++ +|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36778888888888888888888888888888 8888888888776

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.11  E-value=2.2e-11  Score=79.97  Aligned_cols=42  Identities=26%  Similarity=0.476  Sum_probs=35.6

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      |+++|++++||+|++|++.|.+.+.|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567788888888888888888888888888888888888874

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.11  E-value=1.2e-11  Score=86.35  Aligned_cols=52  Identities=17%  Similarity=0.252  Sum_probs=48.1

Q ss_pred             hhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccC
Q psy11590        475 GRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCS  526 (555)
Q Consensus       475 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  526 (555)
                      ++.|.....|..|+++|++++||.|++||+.|...+.|..|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4678889999999999999999999999999999999999999999999874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.9e-11  Score=82.11  Aligned_cols=44  Identities=20%  Similarity=0.441  Sum_probs=39.1

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      +|+++|++++||+|++|++.|.+...|..|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            47888999999999999999999999999999999999998874

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.8e-11  Score=82.27  Aligned_cols=44  Identities=27%  Similarity=0.428  Sum_probs=32.5

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      |+++|++++||+|++|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777665

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.6e-11  Score=81.41  Aligned_cols=45  Identities=24%  Similarity=0.431  Sum_probs=36.2

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|.+++||.|+.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888753

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.6e-11  Score=81.40  Aligned_cols=44  Identities=20%  Similarity=0.448  Sum_probs=37.7

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||+|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47788888888999999999999999999988888888888863

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-11  Score=81.89  Aligned_cols=44  Identities=18%  Similarity=0.434  Sum_probs=38.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      +|+++|++++||+|++|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788889999999999999999999999999999999998864

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.1e-11  Score=80.13  Aligned_cols=43  Identities=23%  Similarity=0.423  Sum_probs=38.2

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      .|+++|++++||+|++|++.|.+..+|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999999884

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.4e-11  Score=79.05  Aligned_cols=42  Identities=26%  Similarity=0.362  Sum_probs=33.9

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      |+++|++++||+|++|++.|.+.+.|..|+++|.+++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788888888888888888888888888888888888774

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.5e-11  Score=80.75  Aligned_cols=44  Identities=20%  Similarity=0.380  Sum_probs=38.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999998864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.4e-11  Score=80.86  Aligned_cols=44  Identities=23%  Similarity=0.462  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999998863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.9e-11  Score=81.16  Aligned_cols=43  Identities=21%  Similarity=0.411  Sum_probs=38.1

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      .|+++|++++||+|++|++.|.+.+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778889999999999999999999999999999999999886

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.08  E-value=2.6e-11  Score=81.45  Aligned_cols=44  Identities=20%  Similarity=0.434  Sum_probs=37.6

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||.|++|++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888888888888888888888888888888888888863

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.5e-11  Score=81.54  Aligned_cols=44  Identities=20%  Similarity=0.444  Sum_probs=36.3

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      +|+++|++++||.|++|++.|.+...|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46778888888888888888888888888888888888888864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.3e-11  Score=80.91  Aligned_cols=44  Identities=18%  Similarity=0.480  Sum_probs=38.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||.|++|++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            47788889999999999999999999999999999999998864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.8e-11  Score=81.23  Aligned_cols=44  Identities=18%  Similarity=0.379  Sum_probs=37.1

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      +|+++|++++||.|++|++.|.++..|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888888888888888888888888888888888888863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.2e-11  Score=80.09  Aligned_cols=43  Identities=26%  Similarity=0.438  Sum_probs=38.2

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      .|+++|++++||+|++|++.|.+...|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788899999999999999999999999999999999999884

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.7e-11  Score=81.33  Aligned_cols=44  Identities=23%  Similarity=0.470  Sum_probs=37.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            47778888888888888888888888888888888888888863

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.6e-11  Score=79.87  Aligned_cols=43  Identities=23%  Similarity=0.407  Sum_probs=37.5

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      +|+++|++++||+|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4778888999999999999999999999999999999988874

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.9e-11  Score=81.22  Aligned_cols=44  Identities=23%  Similarity=0.502  Sum_probs=36.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888888888888888888888888888888888888864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3e-11  Score=81.11  Aligned_cols=44  Identities=23%  Similarity=0.442  Sum_probs=37.9

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888889999999999999999999998888888888863

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=80.80  Aligned_cols=44  Identities=23%  Similarity=0.467  Sum_probs=38.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788999999999999999999999999999999999998863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.4e-11  Score=80.84  Aligned_cols=44  Identities=23%  Similarity=0.431  Sum_probs=36.7

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47778888888888888888888888888888888888888863

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=6.9e-11  Score=82.38  Aligned_cols=46  Identities=26%  Similarity=0.491  Sum_probs=39.9

Q ss_pred             cCCCccccccccchhcccCchHHHHHHH-hcCCCCCeecccccccccC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAA-VHSTERPFVCKLCGIAYKW  508 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~  508 (555)
                      |.++ +||.|++|++.|.....|..|++ +|++++||+|++|++.|.+
T Consensus         7 ~~~~-k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVG-KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSS-CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCC-CCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4455 88999999999999999999986 8999999999999999875

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.6e-11  Score=80.71  Aligned_cols=44  Identities=16%  Similarity=0.342  Sum_probs=37.2

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||+|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46778888888888888888888888888888888888888863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.1e-11  Score=81.05  Aligned_cols=44  Identities=18%  Similarity=0.423  Sum_probs=37.1

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||+|++|++.|.+...|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            46778888888888888888888888888888888888888863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.2e-11  Score=80.10  Aligned_cols=43  Identities=21%  Similarity=0.443  Sum_probs=36.7

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4777888888888888888888888888888888888888874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=4e-11  Score=80.51  Aligned_cols=43  Identities=21%  Similarity=0.478  Sum_probs=36.7

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      .|+++|++++||+|++|++.|.+...|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3677888888888888888888888888888888888888886

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.4e-11  Score=80.27  Aligned_cols=43  Identities=26%  Similarity=0.512  Sum_probs=37.0

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4777888888888888888888888888888888888888886

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.9e-11  Score=80.06  Aligned_cols=44  Identities=16%  Similarity=0.323  Sum_probs=37.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||+|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888888889889998888888888988888888888863

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.5e-11  Score=80.75  Aligned_cols=44  Identities=23%  Similarity=0.456  Sum_probs=38.6

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||.|++|++.|...+.|..|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788899999999999999999999999999999999998864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.7e-11  Score=80.15  Aligned_cols=43  Identities=21%  Similarity=0.519  Sum_probs=37.2

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      |+++|++++||+|++|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            6778888889999999999999999999988888888888863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.9e-11  Score=79.41  Aligned_cols=41  Identities=24%  Similarity=0.483  Sum_probs=35.3

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSL  527 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  527 (555)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67788888888888888888888888888888888888876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.05  E-value=4.9e-11  Score=80.05  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=39.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.++..|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSS-GTGE-KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCCC-CSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCC-CCCC-CCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566 6676 899999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.1e-11  Score=79.96  Aligned_cols=44  Identities=27%  Similarity=0.372  Sum_probs=39.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSS-GTGE-KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SSCC-CCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             Cccc-CCCC-CCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.9e-11  Score=80.05  Aligned_cols=44  Identities=27%  Similarity=0.511  Sum_probs=38.8

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSS-GTGK-KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSCC-SSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcC-CCCC-cCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            5566 6666 899999999999999999999999999999999987

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.5e-11  Score=79.79  Aligned_cols=43  Identities=19%  Similarity=0.451  Sum_probs=36.4

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      |+++|++++||.|++|++.|.++..|..|+++|++++||.|++
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888888888888888888888888888888888888864

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=4.2e-11  Score=79.54  Aligned_cols=44  Identities=20%  Similarity=0.321  Sum_probs=38.5

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         1 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSG-SSGE-KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCC-CSSC-CCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCC-cCCC-cCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455 6666 899999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.9e-11  Score=80.02  Aligned_cols=44  Identities=23%  Similarity=0.434  Sum_probs=39.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSS-GTGE-KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSC-CCCC-CSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCC-CCCC-CCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.8e-11  Score=80.09  Aligned_cols=44  Identities=23%  Similarity=0.447  Sum_probs=39.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSS-GTGE-KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSC-CSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCC-cCCC-CCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.04  E-value=5.4e-11  Score=79.85  Aligned_cols=44  Identities=25%  Similarity=0.434  Sum_probs=38.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSS-GTGE-KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSS-CSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCc-cCCC-CceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=5.9e-11  Score=78.77  Aligned_cols=43  Identities=26%  Similarity=0.437  Sum_probs=38.0

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4778889999999999999999999999999999999998884

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.04  E-value=6.5e-11  Score=77.68  Aligned_cols=41  Identities=29%  Similarity=0.619  Sum_probs=35.5

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSL  527 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  527 (555)
                      |+++|++++||+|++|++.|.++++|..|+++|.+++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56788888888888898888888888888888888888876

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=5e-11  Score=78.24  Aligned_cols=41  Identities=22%  Similarity=0.502  Sum_probs=35.6

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSL  527 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  527 (555)
                      |+++|++++||+|++|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            66788888889999999999988899999888888888876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.8e-11  Score=80.09  Aligned_cols=44  Identities=23%  Similarity=0.383  Sum_probs=38.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSS-GTGG-KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSS-SSSS-CCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccc-cCCC-CCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5566 6666 899999999999999999999999999999999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.1e-11  Score=79.57  Aligned_cols=44  Identities=23%  Similarity=0.292  Sum_probs=38.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSS-GTGE-KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCC-CSSC-CSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCC-CCCC-CCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.7e-11  Score=80.11  Aligned_cols=44  Identities=25%  Similarity=0.464  Sum_probs=38.8

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSS-GTGE-KPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSS-CCCS-SSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccC-CCCC-CCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.03  E-value=4.8e-11  Score=80.08  Aligned_cols=44  Identities=18%  Similarity=0.225  Sum_probs=38.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSS-GTGV-KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCC-SCCC-CSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccC-CCCC-CceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6e-11  Score=79.60  Aligned_cols=44  Identities=23%  Similarity=0.276  Sum_probs=38.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 h~~~-h~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSS-GSVE-KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSC-CCCC-SSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCC-CCCC-CCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4555 6666 899999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.5e-11  Score=79.80  Aligned_cols=44  Identities=25%  Similarity=0.400  Sum_probs=38.5

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSS-GTGE-KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSS-CCCC-CSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCC-cCCC-CCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5566 6666 899999999999999999999999999999999887

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.1e-11  Score=79.59  Aligned_cols=44  Identities=30%  Similarity=0.536  Sum_probs=38.7

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSS-GTGE-KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SSSS-CSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCC-CCCC-CCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5e-11  Score=80.00  Aligned_cols=44  Identities=23%  Similarity=0.479  Sum_probs=38.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|..+..|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSS-GTGE-RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSC-SSCC-CSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCC-cCCC-CCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999887

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.1e-11  Score=79.58  Aligned_cols=45  Identities=24%  Similarity=0.438  Sum_probs=39.4

Q ss_pred             HHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        456 YHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       456 ~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      .|+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         2 ~H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSS-GTGE-KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSC-SSCC-CSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCC-CCCC-cCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            36666 6666 899999999999999999999999999999999987

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6e-11  Score=79.62  Aligned_cols=44  Identities=14%  Similarity=0.268  Sum_probs=35.6

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|.+++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36777888888888888888888888888888888888888763

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.2e-11  Score=79.92  Aligned_cols=44  Identities=20%  Similarity=0.336  Sum_probs=38.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSS-GTGE-NPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCSS-CCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCC-CCCC-cCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.3e-11  Score=79.50  Aligned_cols=44  Identities=25%  Similarity=0.354  Sum_probs=38.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSS-GAGE-KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSC-SSCC-CSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcC-cCCC-CCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5555 6666 899999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.7e-11  Score=79.72  Aligned_cols=44  Identities=23%  Similarity=0.395  Sum_probs=38.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSS-GSGE-KPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCC-SCCC-CSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             Cccc-cCCC-cCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.7e-11  Score=80.12  Aligned_cols=44  Identities=23%  Similarity=0.372  Sum_probs=38.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSS-GTGV-KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSC-SSCC-CSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccc-cCCC-cCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.2e-11  Score=79.92  Aligned_cols=44  Identities=25%  Similarity=0.456  Sum_probs=38.7

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSS-GTGE-KPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-TTCC-CCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcC-CCCC-CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566 6666 899999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.03  E-value=5.9e-11  Score=79.65  Aligned_cols=44  Identities=25%  Similarity=0.463  Sum_probs=38.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSS-GTGE-KRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSS-CTTS-CCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccC-CCCC-cCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.6e-11  Score=79.38  Aligned_cols=44  Identities=27%  Similarity=0.439  Sum_probs=38.5

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSS-GSGE-KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCT-TCCC-CSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCC-CCCC-CCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=5.8e-11  Score=79.69  Aligned_cols=44  Identities=25%  Similarity=0.427  Sum_probs=38.4

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSS-GTGE-KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-SSCC-CSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCC-CCCC-cCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5555 6666 899999999999999999999999999999999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=5.2e-11  Score=79.92  Aligned_cols=44  Identities=27%  Similarity=0.422  Sum_probs=38.5

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSS-GSST-KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCCS-CSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCC-CCCC-CCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999887

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.5e-11  Score=79.80  Aligned_cols=43  Identities=21%  Similarity=0.421  Sum_probs=35.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      .|+++|++++||.|++|++.|.+...|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            4677888888888888888888888888888888888888885

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6e-11  Score=79.60  Aligned_cols=44  Identities=25%  Similarity=0.387  Sum_probs=38.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 h~~~-h~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSS-GTGE-KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCC-CSSC-CSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcC-CCCC-CCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555 6666 899999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.7e-11  Score=79.36  Aligned_cols=44  Identities=18%  Similarity=0.262  Sum_probs=39.3

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSS-GTGE-KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCC-CCCC-CSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             Cccc-CCCC-CCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.7e-11  Score=79.71  Aligned_cols=44  Identities=25%  Similarity=0.456  Sum_probs=38.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSS-GSGE-KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-SSSS-CSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             Cccc-CCCC-CCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            5566 6666 899999999999999999999999999999999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.4e-11  Score=79.16  Aligned_cols=45  Identities=24%  Similarity=0.383  Sum_probs=39.1

Q ss_pred             HHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        456 YHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       456 ~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      .|+++ |.++ +||.|++||+.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSS-GTGE-KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCT-TSSC-CSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccC-CCCC-cCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            36666 6666 899999999999999999999999999999999887

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=8.4e-11  Score=78.86  Aligned_cols=43  Identities=16%  Similarity=0.296  Sum_probs=37.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCC-ccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKA-SAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~~~~  528 (555)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|.+ ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            367888888999999999999999999999999988 8888886

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.5e-11  Score=78.60  Aligned_cols=43  Identities=16%  Similarity=0.451  Sum_probs=34.2

Q ss_pred             HHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        488 AAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       488 ~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      +++|++++||+|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4567788888888888888888888888888888888888765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.2e-11  Score=79.93  Aligned_cols=45  Identities=18%  Similarity=0.244  Sum_probs=39.2

Q ss_pred             HHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        456 YHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       456 ~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      .|+++ |.++ +||.|++||+.|...+.|..|+++|++++||+|++|
T Consensus         2 ~H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSS-GSGE-RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCC-CSCC-CCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCC-CCCC-CCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            36666 6666 899999999999999999999999999999999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.3e-11  Score=79.18  Aligned_cols=45  Identities=24%  Similarity=0.417  Sum_probs=39.4

Q ss_pred             HHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        456 YHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       456 ~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      .|+++ |.++ +||.|++||+.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSS-GSGE-KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTC-CCCC-CSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccC-CCCC-CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            36666 6666 899999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.02  E-value=6.8e-11  Score=79.31  Aligned_cols=44  Identities=30%  Similarity=0.370  Sum_probs=38.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.+...|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSS-GTGE-KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCS-CCCC-CSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCC-CCCC-cCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=7.4e-11  Score=79.16  Aligned_cols=44  Identities=25%  Similarity=0.358  Sum_probs=38.4

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 h~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSS-GSGE-KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSC-CCCC-CSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCC-CCCC-CCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4555 6666 899999999999999999999999999999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.5e-11  Score=78.44  Aligned_cols=41  Identities=22%  Similarity=0.365  Sum_probs=34.4

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSL  527 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  527 (555)
                      |+++|++++||.|++|++.|.+...|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56778888888888888888888888888888888888876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=6.4e-11  Score=79.45  Aligned_cols=44  Identities=27%  Similarity=0.326  Sum_probs=38.7

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSS-GSGE-KSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCC-CCCC-SSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cccc-CCCC-CCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.2e-11  Score=79.91  Aligned_cols=44  Identities=25%  Similarity=0.456  Sum_probs=39.2

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSS-GTGE-KPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCCC-SSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcC-CCCC-CCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=7.6e-11  Score=79.10  Aligned_cols=44  Identities=20%  Similarity=0.338  Sum_probs=38.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSS-GSRE-KSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCC-SSCC-CCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccc-cCCC-CCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5555 6666 899999999999999999999999999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.8e-10  Score=83.98  Aligned_cols=56  Identities=20%  Similarity=0.351  Sum_probs=46.2

Q ss_pred             CCcceecCCCcccccCHHHHHHHHhhccCCCccccc-cccccccCHHHHHHHHHhcCCC
Q psy11590        380 DTMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCE-LCGAYFIHKSSLVAHTTTHSNV  437 (555)
Q Consensus       380 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~-~C~~~f~~~~~L~~H~~~H~~~  437 (555)
                      +.+||.|+.|++.|. ...|..|+++ ++++||.|+ .|++.|.....|..|+++|...
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            566788888888888 8888888888 888888888 8888888888888888887543

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.1e-11  Score=79.58  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=39.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-h~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSS-GTGE-KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSC-CSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcC-CCCC-CCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            5566 6666 899999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.2e-11  Score=79.90  Aligned_cols=44  Identities=23%  Similarity=0.388  Sum_probs=39.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSS-GTGE-KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CSSC-CSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCC-CCCC-CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=3.9e-11  Score=80.57  Aligned_cols=43  Identities=26%  Similarity=0.450  Sum_probs=35.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      +|+++|++++||+|++|++.|.+...|..|+++|.+++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677788888888888888888888888888888888888876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.1e-11  Score=79.25  Aligned_cols=44  Identities=23%  Similarity=0.388  Sum_probs=38.7

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 h~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSS-GSGE-KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCC-CCSS-CCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCc-cCCC-cCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            5555 6666 899999999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.3e-11  Score=80.32  Aligned_cols=43  Identities=23%  Similarity=0.620  Sum_probs=37.6

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778888899999999999999999999999999888888886

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.00  E-value=9.9e-11  Score=78.52  Aligned_cols=44  Identities=18%  Similarity=0.263  Sum_probs=38.2

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ ++|.|++|++.|.+...|..|+++|++++||+|++|
T Consensus         3 h~~~-h~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSS-GAGV-NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCS-SCCC-CSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCC-CCCC-CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455 6666 899999999999999999999999999999999887

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=5.7e-11  Score=78.87  Aligned_cols=43  Identities=23%  Similarity=0.338  Sum_probs=35.7

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      +|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677888888888888888888888888888888888888873

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.1e-10  Score=77.50  Aligned_cols=42  Identities=17%  Similarity=0.253  Sum_probs=33.1

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      |+++|++++||.|++|++.|.+...|..|+++|.+++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            566777888888888888888888888888888888888774

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8.8e-11  Score=78.77  Aligned_cols=44  Identities=20%  Similarity=0.246  Sum_probs=38.4

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 h~~~-h~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSS-GSGE-KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCC-CCSC-CSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCC-CCCC-CCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4455 6666 899999999999999999999999999999999987

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.2e-10  Score=77.21  Aligned_cols=42  Identities=26%  Similarity=0.580  Sum_probs=37.4

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSL  527 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  527 (555)
                      .|+++|++++||+|++|++.|.+.+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            477889999999999999999999999999999999998876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.1e-10  Score=78.34  Aligned_cols=44  Identities=27%  Similarity=0.445  Sum_probs=38.4

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|..+..|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSS-GTGE-KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSS-SSCC-CSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCC-CCCC-CCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5666 6666 899999999999999999999999999999999875

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=2e-10  Score=77.82  Aligned_cols=38  Identities=34%  Similarity=0.729  Sum_probs=25.3

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecccccc
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGI  504 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~  504 (555)
                      ++|.|++|++.|.....|..|+++|++++||+|++|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            66666666666666666666666666666666666664

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=8.7e-11  Score=78.80  Aligned_cols=42  Identities=17%  Similarity=0.336  Sum_probs=26.5

Q ss_pred             HhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        489 AVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       489 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      ++|++++||.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456666666666666666666666666666666666666554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.97  E-value=3.4e-10  Score=75.80  Aligned_cols=45  Identities=16%  Similarity=0.226  Sum_probs=42.9

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLC  105 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  105 (555)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            478899999999999999999999999999999999999999988

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.97  E-value=4.7e-10  Score=83.36  Aligned_cols=57  Identities=30%  Similarity=0.484  Sum_probs=49.2

Q ss_pred             hcCCcceecCC--CcccccCHHHHHHHHhhccCCCcccccc--ccccccCHHHHHHHHHhc
Q psy11590        378 VEDTMRYQCPH--CPSLLKTFWTLKEHFNIHTSEKKYVCEL--CGAYFIHKSSLVAHTTTH  434 (555)
Q Consensus       378 ~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H  434 (555)
                      ....++|.|..  |++.|.....|..|+++|++++||.|++  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567899988  9999999999999999999999999965  999999999999998775

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.4e-10  Score=78.10  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=37.7

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHH-hcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAA-VHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ +||.|++||+.|.....|..|++ +|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSS-GTGK-KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCC-CCCC-CSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccc-cCCC-CCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5556 6666 88999999999999999999998 8999999999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.7e-10  Score=75.61  Aligned_cols=45  Identities=22%  Similarity=0.225  Sum_probs=42.9

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLC  105 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  105 (555)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.9e-10  Score=75.52  Aligned_cols=45  Identities=18%  Similarity=0.175  Sum_probs=42.9

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLC  105 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  105 (555)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999998

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.8e-10  Score=77.28  Aligned_cols=44  Identities=23%  Similarity=0.403  Sum_probs=38.1

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSS-GSGE-KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-CCCC-CSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCC-CCCC-CCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5555 6666 899999999999999999999999999999999875

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.4e-10  Score=75.81  Aligned_cols=45  Identities=18%  Similarity=0.163  Sum_probs=42.9

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLC  105 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  105 (555)
                      .|+++|+++++|.|++|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478899999999999999999999999999999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=3.8e-10  Score=75.21  Aligned_cols=41  Identities=22%  Similarity=0.358  Sum_probs=23.9

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccccc
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCG  503 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~  503 (555)
                      |.++ +||.|++|++.|..+..|..|+++|+++++|.|++||
T Consensus         5 h~~~-k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGE-KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSC-CSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCC-CCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4444 5566666666666666666666666666666666554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=76.02  Aligned_cols=41  Identities=24%  Similarity=0.513  Sum_probs=34.4

Q ss_pred             HHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        488 AAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       488 ~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      .++|++++||+|++|++.|.+...|..|+++|.+++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            45688888888888888888888888888888888888886

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=5.8e-10  Score=77.57  Aligned_cols=46  Identities=22%  Similarity=0.257  Sum_probs=35.7

Q ss_pred             hcCCcceecCCCcccccCHHHHHHHHh-hccCCCccccccccccccC
Q psy11590        378 VEDTMRYQCPHCPSLLKTFWTLKEHFN-IHTSEKKYVCELCGAYFIH  423 (555)
Q Consensus       378 ~~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~  423 (555)
                      +.++++|.|++|++.|.....|..|++ +|++++||.|++|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            456677888888888888888888876 7888888888888887764

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.4e-10  Score=72.73  Aligned_cols=39  Identities=23%  Similarity=0.429  Sum_probs=32.0

Q ss_pred             HhcCCCCCeecccccccccChhhHHHHHHhCCCccccCc
Q psy11590        489 AVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSL  527 (555)
Q Consensus       489 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~  527 (555)
                      ++|++++||+|++|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            357788888888888888888888888888888888876

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.91  E-value=4.1e-11  Score=86.18  Aligned_cols=54  Identities=17%  Similarity=0.369  Sum_probs=41.5

Q ss_pred             HHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHH
Q psy11590        455 RYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLV  513 (555)
Q Consensus       455 ~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  513 (555)
                      ..|+++ |.++ +||.|++||+.|.....|.   ++|++++||+|++||+.|....++.
T Consensus         3 ~~h~~~-H~~~-k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            3 ETDERD-STNR-ASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCSSS-CCSS-SEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhHHHH-cCCC-CCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            456666 6666 8888888888888877776   7788888888888888887766543

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.90  E-value=3.5e-10  Score=74.09  Aligned_cols=42  Identities=19%  Similarity=0.332  Sum_probs=36.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         1 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSG-SSGE-NPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSS-SSSC-CSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCC-CCCC-CCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4455 6666 8999999999999999999999999999999985

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.1e-10  Score=75.72  Aligned_cols=44  Identities=20%  Similarity=0.466  Sum_probs=34.7

Q ss_pred             HHHhcCCCCCeecc--cccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        487 HAAVHSTERPFVCK--LCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       487 H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      |.++|++++||+|.  .|++.|..+..|..|+++|.+++||.|+.|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44667788888887  788888888888888888888888888765

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4.6e-10  Score=75.19  Aligned_cols=41  Identities=17%  Similarity=0.300  Sum_probs=31.3

Q ss_pred             HHhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        488 AAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       488 ~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      +++|++++||+|++|++.|.+...|..|+++|++++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45677777777777777777777777777777777777775

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.4e-10  Score=73.61  Aligned_cols=42  Identities=19%  Similarity=0.347  Sum_probs=36.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++|++.|...+.|..|+++|++++||+|+
T Consensus         1 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSG-SSGE-KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSS-SCSC-CSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcC-cCCC-CCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455 6666 8999999999999999999999999999999985

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.90  E-value=6.5e-10  Score=73.22  Aligned_cols=39  Identities=18%  Similarity=0.292  Sum_probs=27.4

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      +|++++||.|++|++.|...+.|..|+++|++++||.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            466677777777777777777777777777777777664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=3.8e-10  Score=75.62  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=37.4

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSS-GTGQ-RPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCC-CCCS-SSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             Cccc-cCCC-cCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5666 6666 89999999999999999999999999999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=6.9e-10  Score=73.90  Aligned_cols=41  Identities=24%  Similarity=0.516  Sum_probs=39.7

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccC
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTT  530 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~  530 (555)
                      .|++++||+|++|++.|..++.|..|+++|++++||.|+.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            68999999999999999999999999999999999999987

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.89  E-value=3.7e-10  Score=75.64  Aligned_cols=43  Identities=26%  Similarity=0.410  Sum_probs=37.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSS-GTGE-KPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCC-CCCC-CSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCC-CCCC-CCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5666 6666 89999999999999999999999999999999874

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.4e-10  Score=75.26  Aligned_cols=43  Identities=26%  Similarity=0.512  Sum_probs=37.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSS-GTGE-KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCC-CCCC-CSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcC-CCCC-cCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999874

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.4e-10  Score=75.25  Aligned_cols=43  Identities=28%  Similarity=0.458  Sum_probs=37.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSS-GTGE-NPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCC-CCSC-CSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCC-CCCC-CCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999874

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.6e-10  Score=75.18  Aligned_cols=43  Identities=21%  Similarity=0.437  Sum_probs=37.4

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSS-GTGE-KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCC-CSSC-CSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCC-CCCC-cCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5666 6666 89999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.2e-10  Score=75.39  Aligned_cols=43  Identities=21%  Similarity=0.408  Sum_probs=37.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSS-GTGE-RHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCS-SCCC-CCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccC-cCCC-CCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=1.3e-09  Score=73.67  Aligned_cols=42  Identities=21%  Similarity=0.355  Sum_probs=39.9

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccCC
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTS  531 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~  531 (555)
                      .|.++++|.|++|++.|.+...|..|+++|++++||.|+.|+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            477899999999999999999999999999999999999986

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.4e-10  Score=75.24  Aligned_cols=43  Identities=28%  Similarity=0.432  Sum_probs=37.1

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSS-GTGE-KPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCC-SCCC-CCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCC-CCCC-CCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.8e-10  Score=75.06  Aligned_cols=43  Identities=26%  Similarity=0.522  Sum_probs=36.8

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSS-GTGE-KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCC-CSCC-CTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcC-CCCC-cCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999874

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.6e-10  Score=74.75  Aligned_cols=43  Identities=30%  Similarity=0.524  Sum_probs=37.1

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSS-GMGE-KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSC-CCCC-CCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             Cccc-cCCC-CCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.9e-10  Score=75.03  Aligned_cols=43  Identities=23%  Similarity=0.345  Sum_probs=36.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSS-GTGE-KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCS-SCCC-CSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCC-CCCC-CCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.5e-10  Score=74.79  Aligned_cols=43  Identities=21%  Similarity=0.452  Sum_probs=37.0

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSS-GTGE-RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCS-CSSC-CCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcc-cCCC-CCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999874

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.1e-10  Score=74.58  Aligned_cols=43  Identities=26%  Similarity=0.405  Sum_probs=37.1

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 h~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSS-GAGK-KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSS-CCSS-CCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCC-CCCC-CCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4555 6666 89999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.2e-10  Score=74.92  Aligned_cols=43  Identities=23%  Similarity=0.512  Sum_probs=37.1

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSS-GTGE-KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCC-CCSC-CSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCC-CCCC-cCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            5666 6666 89999999999999999999999999999999874

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.4e-10  Score=75.25  Aligned_cols=43  Identities=23%  Similarity=0.520  Sum_probs=37.2

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSS-GTGE-KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSS-SSCC-CSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcC-cCCC-cCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5666 6666 89999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.9e-10  Score=73.74  Aligned_cols=40  Identities=23%  Similarity=0.436  Sum_probs=36.2

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |.++ ++|.|++|++.|.....|..|+++|++++||+|++|
T Consensus         7 h~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGE-KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             STTC-CSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCC-CCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            6666 899999999999999999999999999999999987

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.2e-10  Score=74.92  Aligned_cols=43  Identities=33%  Similarity=0.512  Sum_probs=36.5

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 h~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSS-GTGE-KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSS-CSSC-CSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCC-CCCC-cccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            4455 6666 89999999999999999999999999999999874

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.1e-10  Score=74.24  Aligned_cols=42  Identities=26%  Similarity=0.428  Sum_probs=36.6

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSS-GSGK-KPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCS-CCCS-CSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCC-cCCC-CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5555 6666 8999999999999999999999999999999986

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.6e-10  Score=73.56  Aligned_cols=42  Identities=21%  Similarity=0.320  Sum_probs=36.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSS-GTGE-KPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSC-CSCC-CSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccC-CCCC-CCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5666 6666 8999999999999999999999999999999985

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6e-10  Score=74.58  Aligned_cols=43  Identities=26%  Similarity=0.479  Sum_probs=36.9

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|++
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSS-GTGE-KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCC-CCCC-CCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccC-CCCC-CCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999874

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.6e-10  Score=73.56  Aligned_cols=42  Identities=21%  Similarity=0.327  Sum_probs=36.5

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|+
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSS-GTGM-KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCC-SSSS-SSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcC-CCCC-cCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5666 6666 8999999999999999999999999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6e-10  Score=73.80  Aligned_cols=42  Identities=21%  Similarity=0.332  Sum_probs=36.7

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++||+.|.....|..|+++|++++||+|+
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSS-GTGE-NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCS-SSSC-CSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             Cccc-cCCC-cCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5666 6666 8999999999999999999999999999999985

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.4e-10  Score=74.46  Aligned_cols=43  Identities=26%  Similarity=0.444  Sum_probs=37.2

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            3 SGSS-GTGE-KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCC-CSSC-CSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             cccc-CCCC-CCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5666 6666 89999999999999999999999999999999873

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=8.3e-10  Score=73.09  Aligned_cols=42  Identities=19%  Similarity=0.332  Sum_probs=37.3

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSS-GAGE-NPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCC-CSCC-CSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             Cccc-cCCC-CCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5666 7777 8999999999999999999999999999999985

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1e-09  Score=73.46  Aligned_cols=43  Identities=28%  Similarity=0.478  Sum_probs=37.2

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 h~~~-h~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSS-GTGE-KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCC-CCCS-SSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCC-cCCC-CCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4455 6666 89999999999999999999999999999999963

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=8.1e-10  Score=73.94  Aligned_cols=43  Identities=21%  Similarity=0.333  Sum_probs=37.1

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCC-CCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHST-ERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++ ++||+|++
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSS-GQKE-KCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCC-CCCS-CCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             Cccc-cCCC-CCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566 6666 899999999999999999999999999 99999874

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.82  E-value=3.6e-10  Score=78.65  Aligned_cols=52  Identities=25%  Similarity=0.394  Sum_probs=44.1

Q ss_pred             hhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCee
Q psy11590        445 EKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFV  498 (555)
Q Consensus       445 ~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~  498 (555)
                      ++.|.....|..|+++ |.++ ++|.|++||+.|...+.|..|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSR-SQSE-QPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHH-HTSS-CCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHh-cCCC-CCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3567777888888888 6666 89999999999999999999999999998874

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.82  E-value=9.6e-10  Score=71.92  Aligned_cols=41  Identities=17%  Similarity=0.328  Sum_probs=35.8

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeec
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVC  499 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  499 (555)
                      |+++ |.++ +||.|++||+.|..+..|..|+++|++++||+|
T Consensus         2 H~~~-H~~~-~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGS-SGGE-TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSC-CCSS-CCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCcc-CCCC-CCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3445 6666 899999999999999999999999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=7.2e-10  Score=72.56  Aligned_cols=41  Identities=24%  Similarity=0.507  Sum_probs=35.2

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeec
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVC  499 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  499 (555)
                      |+++ |.++ +||.|++|++.|...+.|..|+++|++++||+|
T Consensus         2 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGS-SGGE-KPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSC-CSSS-CCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcc-cCCC-CCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            4455 6666 899999999999999999999999999999987

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=7.7e-10  Score=74.05  Aligned_cols=42  Identities=24%  Similarity=0.363  Sum_probs=36.3

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSS-GTGE-KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCC-CCSC-CCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccc-cCCC-CCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5666 6666 8999999999999999999999999999999886

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=8.9e-10  Score=72.93  Aligned_cols=42  Identities=19%  Similarity=0.279  Sum_probs=36.1

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSS-GHTR-KRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSC-CCCC-SSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccc-cCCC-CCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            5566 6666 8999999999999999999999999999999885

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1e-09  Score=73.47  Aligned_cols=43  Identities=23%  Similarity=0.443  Sum_probs=37.2

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|+.
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSS-GTGE-KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCS-SCCC-CSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cccC-CCCC-CCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566 6666 89999999999999999999999999999999863

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.9e-09  Score=71.13  Aligned_cols=44  Identities=16%  Similarity=0.180  Sum_probs=41.3

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNL  104 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  104 (555)
                      .|+++|+++++|.|++|++.|.....|..|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.4e-09  Score=71.60  Aligned_cols=43  Identities=19%  Similarity=0.155  Sum_probs=40.8

Q ss_pred             cccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCCC
Q psy11590         63 EHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLC  105 (555)
Q Consensus        63 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  105 (555)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.3e-09  Score=72.11  Aligned_cols=42  Identities=26%  Similarity=0.439  Sum_probs=36.3

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ ++|.|++|++.|.....|..|+++|++++||+|+
T Consensus         3 h~~~-h~~~-~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSS-GAAK-TTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCS-CSSS-CCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCC-CCCC-cCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4455 6666 8999999999999999999999999999999985

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=3.2e-09  Score=70.98  Aligned_cols=44  Identities=20%  Similarity=0.166  Sum_probs=41.4

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNL  104 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  104 (555)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999975

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=7.8e-10  Score=72.38  Aligned_cols=41  Identities=20%  Similarity=0.494  Sum_probs=35.7

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeec
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVC  499 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  499 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|
T Consensus         2 H~~~-H~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGS-SGGE-KPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCC-CCSS-CSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcc-cCCC-CCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            4455 6666 899999999999999999999999999999987

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.7e-09  Score=70.65  Aligned_cols=44  Identities=18%  Similarity=0.224  Sum_probs=41.2

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNL  104 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  104 (555)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999974

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=8.8e-10  Score=72.95  Aligned_cols=42  Identities=21%  Similarity=0.407  Sum_probs=37.3

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++|++.|.....|..|+++|++++||+|.
T Consensus         3 H~~~-H~~~-~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSS-GTDS-KSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCC-CCCC-CCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcC-CCCC-CCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5666 6666 8999999999999999999999999999999985

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.78  E-value=4.2e-09  Score=67.52  Aligned_cols=38  Identities=13%  Similarity=0.285  Sum_probs=30.9

Q ss_pred             cCCCCCeecccccccccChhhHHHHHHhCCCccccCcc
Q psy11590        491 HSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       491 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      |++++||.|++||+.|...+.|..|+++|.+++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            56788888888888888888888888888888888753

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.5e-09  Score=70.76  Aligned_cols=44  Identities=20%  Similarity=0.236  Sum_probs=41.3

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNL  104 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  104 (555)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.77  E-value=3.4e-09  Score=69.67  Aligned_cols=39  Identities=13%  Similarity=0.271  Sum_probs=35.1

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |.++ ++|.|++|++.|.....|..|+++|++++||+|++
T Consensus         5 h~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            5 SSGN-GAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSSS-CCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCCC-CCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            6666 89999999999999999999999999999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=4.7e-10  Score=83.80  Aligned_cols=66  Identities=23%  Similarity=0.309  Sum_probs=56.2

Q ss_pred             HHHHHHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        453 RLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       453 ~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      .|..|+++ |.+. +|+.|..|++.|. ...|..|+ .|.+++||.|+.|++.|. +..|..|+++|.+++
T Consensus         4 ~L~~H~~~-~c~~-r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEET-ECPL-RLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCCC-CCCC-CCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHhhCcc-cCCC-cccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            35567666 6666 8999999999994 89999999 899999999999999877 589999999998874

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=4.4e-09  Score=68.69  Aligned_cols=41  Identities=17%  Similarity=0.233  Sum_probs=39.2

Q ss_pred             ccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccC
Q psy11590         62 TEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVC  102 (555)
Q Consensus        62 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  102 (555)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            77889999999999999999999999999999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=5.1e-09  Score=69.96  Aligned_cols=44  Identities=14%  Similarity=0.222  Sum_probs=41.2

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNL  104 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  104 (555)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37788999999999999999999999999999999999999974

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.7e-09  Score=67.49  Aligned_cols=36  Identities=17%  Similarity=0.387  Sum_probs=30.4

Q ss_pred             HhcCCCCCeecccccccccChhhHHHHHHhCCCccc
Q psy11590        489 AVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAK  524 (555)
Q Consensus       489 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  524 (555)
                      ++|++++||.|++|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            568888888888888888888888888888888775

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.3e-09  Score=72.35  Aligned_cols=40  Identities=28%  Similarity=0.378  Sum_probs=36.3

Q ss_pred             cCCCccccccc--cchhcccCchHHHHHHHhcCCCCCeecccc
Q psy11590        462 HENKWKSAACD--ICGRVFLDSKNMKKHAAVHSTERPFVCKLC  502 (555)
Q Consensus       462 H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C  502 (555)
                      |.++ ++|.|.  +|++.|.....|..|+++|++++||+|.+|
T Consensus         7 H~~~-k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGE-KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCC-CCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCC-CCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6666 899998  899999999999999999999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=5e-09  Score=70.01  Aligned_cols=39  Identities=26%  Similarity=0.567  Sum_probs=34.8

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |.++ ++|.|++|++.|.....|..|+++|++++||+|++
T Consensus         7 h~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            7 GHGE-RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCC-SSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCC-CCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            6666 89999999999999999999999999999999964

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.7e-09  Score=70.53  Aligned_cols=42  Identities=19%  Similarity=0.283  Sum_probs=36.1

Q ss_pred             HHhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        457 HISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |+++ |.++ +||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~-H~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGSS-GSGE-KPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCC-CCCC-CSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcc-cCCC-cCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            5566 6666 8999999999999999999999999999999874

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.72  E-value=2.5e-09  Score=76.73  Aligned_cols=54  Identities=17%  Similarity=0.375  Sum_probs=47.2

Q ss_pred             hhhhhhccccCCceeecCccCccccchhhhhhhhhhcC-CCcccCCCCCccCCCchHHH
Q psy11590        190 LSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHD-DRKFSCSHCGNSYKNPIFLK  247 (555)
Q Consensus       190 l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~L~  247 (555)
                      |..|+++| ++++||.|++|++.|.....|.   ++|. +++|.|++|++.|....++.
T Consensus         2 L~~h~~~H-~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDS-TNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSC-CSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHc-CCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            56788888 9999999999999999999887   7787 88999999999998766543

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.8e-09  Score=69.71  Aligned_cols=39  Identities=23%  Similarity=0.424  Sum_probs=35.2

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeeccc
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKL  501 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~  501 (555)
                      |.++ ++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         7 h~~~-k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            7 GTGQ-KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCSC-CSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCC-cCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            6666 89999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=5.3e-09  Score=67.88  Aligned_cols=37  Identities=19%  Similarity=0.480  Sum_probs=34.1

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeec
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVC  499 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C  499 (555)
                      |.++ +||.|++|++.|.....|..|+++|++++||+|
T Consensus         5 h~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQ-RVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCC-CCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCC-CCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            6666 899999999999999999999999999999988

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.70  E-value=9e-09  Score=64.08  Aligned_cols=35  Identities=23%  Similarity=0.362  Sum_probs=29.6

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCccc
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAK  524 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  524 (555)
                      +|++++||.|++|++.|.+.+.|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            37788888888888888888888888888888775

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.70  E-value=4.6e-09  Score=66.43  Aligned_cols=36  Identities=19%  Similarity=0.373  Sum_probs=31.2

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      |+++|++++||+|++|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            677888889999999999999999999999888764

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6.3e-09  Score=69.49  Aligned_cols=43  Identities=16%  Similarity=0.220  Sum_probs=40.7

Q ss_pred             cccccccccCCCCCccchhhccChhhHHhhhhhhhcCCcccCC
Q psy11590         61 CTEHSNLFPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCN  103 (555)
Q Consensus        61 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  103 (555)
                      .|+++|+++++|.|++|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788899999999999999999999999999999999999996

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.67  E-value=1.2e-08  Score=63.51  Aligned_cols=35  Identities=34%  Similarity=0.587  Sum_probs=29.2

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCccc
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAK  524 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  524 (555)
                      +|++++||.|++|++.|...+.|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            37788888888888888888888888888888775

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.8e-09  Score=83.23  Aligned_cols=59  Identities=12%  Similarity=0.206  Sum_probs=34.2

Q ss_pred             HhcCCCCCeecccccccccChhhHHHHHHhCCCccccCcccCCCCccccccceeeecCCcc
Q psy11590        489 AVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMTTSPLSVKFAMPHTRFDGGQV  549 (555)
Q Consensus       489 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  549 (555)
                      ++|++++||+|++|++.|.+...|..|+++|.+++||.|..+..  ...+..|.+.++|..
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~--~~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER--RKQLLSKQKYADGAF   76 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC--CCCCCCCCCCCCCSS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh--HHHHHhhhccccccc
Confidence            34566666666666666666666666666666666666655442  334445555555544

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.64  E-value=1.8e-08  Score=71.26  Aligned_cols=39  Identities=26%  Similarity=0.359  Sum_probs=31.4

Q ss_pred             cCCCCCeeccc--ccccccChhhHHHHH-HhCCCccccCccc
Q psy11590        491 HSTERPFVCKL--CGIAYKWRKNLVRHQ-KNCKASAKCSLMT  529 (555)
Q Consensus       491 H~~~~~~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~~~~~~  529 (555)
                      .+|++||+|..  |+++|...++|..|+ ++|++++|+.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            57888888865  888888888888887 5788888887754

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=1.8e-09  Score=83.25  Aligned_cols=56  Identities=20%  Similarity=0.310  Sum_probs=47.8

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      |.++ +||.|++|++.|.....|..|+++|++++||+|..|.    .+..|..|++.|.|.
T Consensus        20 H~~~-kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           20 RLQN-STYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCCC-SCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             cCCC-CCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            6666 8999999999999999999999999999999997655    567788888888874

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.56  E-value=2.4e-08  Score=63.89  Aligned_cols=37  Identities=24%  Similarity=0.433  Sum_probs=32.7

Q ss_pred             CCCccccccccchhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        463 ENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       463 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      .++ +||.|++||+.|...+.|..|+++|++++||.+.
T Consensus         2 ~~~-k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            2 WPP-RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             CCS-SSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCC-CceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            455 8999999999999999999999999999998763

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=4.2e-08  Score=61.89  Aligned_cols=32  Identities=22%  Similarity=0.198  Sum_probs=23.2

Q ss_pred             cCCCCCeeccc--ccccccChhhHHHHHHhCCCc
Q psy11590        491 HSTERPFVCKL--CGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       491 H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      +++++||+|++  |++.|..++.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56677777765  777777777777777777665

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.52  E-value=4.2e-08  Score=60.11  Aligned_cols=30  Identities=27%  Similarity=0.475  Sum_probs=16.5

Q ss_pred             ccccccchhcccCchHHHHHHHhcCCCCCe
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHSTERPF  497 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  497 (555)
                      ||.|++||+.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.8e-08  Score=62.12  Aligned_cols=34  Identities=18%  Similarity=0.283  Sum_probs=28.3

Q ss_pred             HhcCCCCCeecccccccccChhhHHHH-HHhCCCc
Q psy11590        489 AVHSTERPFVCKLCGIAYKWRKNLVRH-QKNCKAS  522 (555)
Q Consensus       489 ~~H~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~  522 (555)
                      ++|++++||+|+.|++.|..++.|..| +++|.++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            568888888888888888888888888 8888764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.49  E-value=4.6e-08  Score=62.11  Aligned_cols=36  Identities=25%  Similarity=0.579  Sum_probs=27.6

Q ss_pred             cCCCCCeecc--cccccccChhhHHHHHHhCCCccccC
Q psy11590        491 HSTERPFVCK--LCGIAYKWRKNLVRHQKNCKASAKCS  526 (555)
Q Consensus       491 H~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~  526 (555)
                      |++++||.|.  .|++.|...+.|..|+++|.+++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            5677788888  48888888888888888888777763

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=7.1e-08  Score=60.33  Aligned_cols=34  Identities=29%  Similarity=0.542  Sum_probs=27.7

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      .|++++||+|.+|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4778888888888888888888888888887764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=6.4e-08  Score=60.57  Aligned_cols=34  Identities=18%  Similarity=0.201  Sum_probs=27.7

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      .|++++||+|.+|++.|...+.|..|+++|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4778888888888888888888888888887754

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=7.8e-08  Score=60.10  Aligned_cols=34  Identities=24%  Similarity=0.451  Sum_probs=26.1

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      +|++++||+|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4677788888888888888888888888777653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=4.8e-08  Score=61.60  Aligned_cols=35  Identities=20%  Similarity=0.355  Sum_probs=26.2

Q ss_pred             HhcCCCCCeecccccccccCh-hhHHHHHHhCCCcc
Q psy11590        489 AVHSTERPFVCKLCGIAYKWR-KNLVRHQKNCKASA  523 (555)
Q Consensus       489 ~~H~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~~~  523 (555)
                      ++|++++||+|++|++.|.+. +.|..|+++|.+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            357777788888888888877 78888887777653

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=4.7e-08  Score=72.81  Aligned_cols=62  Identities=23%  Similarity=0.303  Sum_probs=55.4

Q ss_pred             ccchhhhhhccccCCceeecCccCccccchhhhhhhhhhcC-CCcccCCCCCccCCCchHHHhHHHh
Q psy11590        187 NSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHD-DRKFSCSHCGNSYKNPIFLKRHFRE  252 (555)
Q Consensus       187 ~~~l~~H~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~L~~H~~~  252 (555)
                      ...|..|++++ .+++++.|+.|++.|. ...|..|+ .|. +++|.|+.|++.|. ...|..|+++
T Consensus         2 ~~~L~~H~~~~-c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A            2 SSGSSGHEETE-CPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCCCSCCCCCC-CCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             chHHHhhCccc-CCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH
Confidence            35688898888 9999999999999995 99999999 665 89999999999877 5999999987

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.44  E-value=8.4e-08  Score=58.70  Aligned_cols=32  Identities=16%  Similarity=0.268  Sum_probs=30.4

Q ss_pred             CCeecccccccccChhhHHHHHHhCCCccccC
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKASAKCS  526 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  526 (555)
                      +||.|++||+.|...+.|..|+++|.+++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58999999999999999999999999999985

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.42  E-value=1.2e-07  Score=63.80  Aligned_cols=35  Identities=29%  Similarity=0.611  Sum_probs=28.7

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHH-hCCCccc
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQK-NCKASAK  524 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~  524 (555)
                      +|++++||.|.+|++.|.+..+|..|++ +|.++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4889999999999999999999999999 8887754

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.42  E-value=1.4e-07  Score=66.74  Aligned_cols=39  Identities=23%  Similarity=0.288  Sum_probs=33.8

Q ss_pred             cCCCcccccccc--chhcccCchHHHHHH-HhcCCCCCeeccc
Q psy11590        462 HENKWKSAACDI--CGRVFLDSKNMKKHA-AVHSTERPFVCKL  501 (555)
Q Consensus       462 H~~~~~~~~C~~--C~k~f~~~~~L~~H~-~~H~~~~~~~C~~  501 (555)
                      ..++ +||+|+.  |+++|...+.|..|+ ++|++++||.|..
T Consensus        22 ~sGE-KPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPY-RPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSS-CSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCC-CCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            3455 9999975  999999999999997 6899999999865

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.41  E-value=1e-07  Score=59.13  Aligned_cols=32  Identities=28%  Similarity=0.419  Sum_probs=24.4

Q ss_pred             cCCCCCeecccccccccChhhHHHHHHhCCCccccCccc
Q psy11590        491 HSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKCSLMT  529 (555)
Q Consensus       491 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  529 (555)
                      +.||+||+|+.||++|.++++|..|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            45778888888888888888888887       666653

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.41  E-value=1.3e-07  Score=59.54  Aligned_cols=35  Identities=23%  Similarity=0.307  Sum_probs=23.7

Q ss_pred             HHhhccCCCccccccccccccCHHHHHHHHHhcCC
Q psy11590        402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSN  436 (555)
Q Consensus       402 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  436 (555)
                      |+++|++++||.|+.|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            55666666777777777777777777777666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=9.7e-08  Score=60.10  Aligned_cols=34  Identities=21%  Similarity=0.493  Sum_probs=30.1

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERP  496 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  496 (555)
                      |.++ +||.|++||+.|.....|..|+++|++++|
T Consensus         4 h~~~-k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            4 GSSG-RSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCC-CCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCC-CCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            6666 899999999999999999999999998875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.5e-07  Score=58.70  Aligned_cols=33  Identities=24%  Similarity=0.493  Sum_probs=22.0

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      .|++++||.|++|++.|.+...|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            356666677777777777667777776666655

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.37  E-value=1.9e-07  Score=57.79  Aligned_cols=34  Identities=15%  Similarity=0.344  Sum_probs=29.5

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERP  496 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  496 (555)
                      |.++ +||.|++|++.|.....|..|+++|++++|
T Consensus         2 h~~~-k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGS-SGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCC-CSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCC-CCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5555 899999999999999999999999998875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.1e-07  Score=58.07  Aligned_cols=33  Identities=21%  Similarity=0.524  Sum_probs=23.3

Q ss_pred             cCCCCCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        491 HSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       491 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      |.+++||.|++|++.|.....|..|+++|.+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            566777777777777777777777777776653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.35  E-value=4.6e-08  Score=65.50  Aligned_cols=41  Identities=17%  Similarity=0.279  Sum_probs=33.3

Q ss_pred             HHHHHHHhcCCCCCeecc--cccccccChhhHHHHHHhCCCcc
Q psy11590        483 NMKKHAAVHSTERPFVCK--LCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       483 ~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      .+..|+..|++++||+|+  .|++.|...++|..|+++|.+++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344566678899999995  69999999999999999988764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.35  E-value=2.3e-07  Score=57.47  Aligned_cols=34  Identities=26%  Similarity=0.498  Sum_probs=29.6

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTERP  496 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  496 (555)
                      |.++ +||.|++|++.|.....|..|+++|++++|
T Consensus         2 H~~~-k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGK-RPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCC-SCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCC-cCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5566 899999999999999999999999998875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.30  E-value=3.9e-08  Score=59.78  Aligned_cols=30  Identities=20%  Similarity=0.373  Sum_probs=18.3

Q ss_pred             CeecccccccccChhhHHHHHHhCCCcccc
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKASAKC  525 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  525 (555)
                      ||+|++||+.|...++|..|+++|.+++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            556666666666666666666666666554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=3.9e-07  Score=57.39  Aligned_cols=33  Identities=18%  Similarity=0.279  Sum_probs=28.1

Q ss_pred             cCCCcccccccc--chhcccCchHHHHHHHhcCCCC
Q psy11590        462 HENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       462 H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +.++ +||+|++  |++.|..++.|..|+++|+++.
T Consensus         4 ~~ge-kp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSSG-ILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSCC-CCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCC-CCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4555 8999986  9999999999999999998863

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.25  E-value=4.7e-08  Score=59.41  Aligned_cols=31  Identities=23%  Similarity=0.396  Sum_probs=28.5

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCe
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPF  497 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  497 (555)
                      +||.|++||+.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5799999999999999999999999999987

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.24  E-value=3.8e-07  Score=57.35  Aligned_cols=32  Identities=19%  Similarity=0.478  Sum_probs=22.5

Q ss_pred             cCCCCCeeccc--ccccccChhhHHHHHHhCCCc
Q psy11590        491 HSTERPFVCKL--CGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       491 H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      |++++||.|.+  |++.|...+.|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56677777764  777777777777777777665

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.21  E-value=4.3e-07  Score=57.42  Aligned_cols=35  Identities=23%  Similarity=0.473  Sum_probs=30.3

Q ss_pred             cCCCccccccc--cchhcccCchHHHHHHHhcCCCCCe
Q psy11590        462 HENKWKSAACD--ICGRVFLDSKNMKKHAAVHSTERPF  497 (555)
Q Consensus       462 H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~  497 (555)
                      |.++ +||.|+  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~-k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDD-KPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTC-CCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCC-cceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3455 899999  5999999999999999999999887

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=6.7e-07  Score=56.17  Aligned_cols=33  Identities=33%  Similarity=0.468  Sum_probs=20.7

Q ss_pred             hhccCCCccccccccccccCHHHHHHH-HHhcCC
Q psy11590        404 NIHTSEKKYVCELCGAYFIHKSSLVAH-TTTHSN  436 (555)
Q Consensus       404 ~~H~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~  436 (555)
                      ++|++++||.|+.|++.|.....|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            455666666666666666666666666 566654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=9.7e-07  Score=52.17  Aligned_cols=29  Identities=21%  Similarity=0.591  Sum_probs=18.4

Q ss_pred             CCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      ++||.|..|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35666666666666666666666666654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=8e-07  Score=55.31  Aligned_cols=33  Identities=21%  Similarity=0.320  Sum_probs=28.0

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      |.++ +||.|++|++.|.....|..|+++|++++
T Consensus         4 h~~~-k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSG-KPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCC-CSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCC-CCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5566 88999999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=7.6e-07  Score=55.46  Aligned_cols=33  Identities=24%  Similarity=0.445  Sum_probs=27.8

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      |.++ +||.|++|++.|...+.|..|+++|++++
T Consensus         4 h~~~-k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSG-LLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCC-CCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCC-CCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5555 88999999999999999999999988764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=1e-06  Score=54.76  Aligned_cols=33  Identities=27%  Similarity=0.668  Sum_probs=28.5

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      |.++ ++|.|++|++.|.....|..|+++|++++
T Consensus         4 h~~~-~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSG-KTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCC-SSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCC-CCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5556 88999999999999999999999998874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=9.6e-07  Score=54.99  Aligned_cols=33  Identities=30%  Similarity=0.496  Sum_probs=28.1

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      |.++ +||+|++|++.|.....|..|+++|++++
T Consensus         4 h~~~-k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSG-KPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCC-CSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCC-CCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            5566 88999999999999999999999998764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=1.4e-06  Score=50.61  Aligned_cols=28  Identities=21%  Similarity=0.673  Sum_probs=18.6

Q ss_pred             CCCeecccccccccChhhHHHHHHhCCC
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      ++||+|++|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3566677777777777777777666653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=1.2e-06  Score=54.44  Aligned_cols=33  Identities=24%  Similarity=0.579  Sum_probs=28.0

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      |.++ +||.|++|++.|.....|..|+++|++++
T Consensus         4 ~~~~-k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSG-KIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCC-CCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCC-CCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4555 88999999999999999999999998864

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.12  E-value=1.2e-06  Score=51.37  Aligned_cols=27  Identities=19%  Similarity=0.321  Sum_probs=14.7

Q ss_pred             CeecccccccccChhhHHHHHHhCCCc
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      ||.|+.|++.|...+.|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.12  E-value=1.2e-06  Score=51.83  Aligned_cols=28  Identities=21%  Similarity=0.393  Sum_probs=15.3

Q ss_pred             CeecccccccccChhhHHHHHHhCCCcc
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      ||.|++|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4555555555555555555555555544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.1e-06  Score=55.07  Aligned_cols=33  Identities=15%  Similarity=0.474  Sum_probs=28.4

Q ss_pred             cCCCccccccccchhcccCc-hHHHHHHHhcCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDS-KNMKKHAAVHSTER  495 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~-~~L~~H~~~H~~~~  495 (555)
                      |.++ +||.|++|++.|... +.|..|+++|++++
T Consensus         4 h~~~-k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            4 GSSG-RAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCC-CCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCC-CCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            5666 899999999999998 99999999998764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=3e-06  Score=60.69  Aligned_cols=33  Identities=18%  Similarity=0.377  Sum_probs=26.4

Q ss_pred             cCCCCCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        491 HSTERPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       491 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      +.+++||+|.+|++.|.+++.|..|+++|++++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            567788888888888888888888888888764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.10  E-value=1.4e-06  Score=50.20  Aligned_cols=26  Identities=19%  Similarity=0.470  Sum_probs=17.6

Q ss_pred             CCCeecccccccccChhhHHHHHHhC
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      ++||+|++||+.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35667777777777777777776665

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.10  E-value=1.3e-06  Score=51.27  Aligned_cols=29  Identities=24%  Similarity=0.545  Sum_probs=24.5

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +||.|++||+.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            47888899999998899999988888764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=2e-06  Score=49.50  Aligned_cols=26  Identities=27%  Similarity=0.602  Sum_probs=16.9

Q ss_pred             CCCeecccccccccChhhHHHHHHhC
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      ++||.|+.||+.|.+.+.|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35666666666666666666666665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.08  E-value=1.8e-06  Score=50.59  Aligned_cols=26  Identities=31%  Similarity=0.763  Sum_probs=12.1

Q ss_pred             ccccccchhcccCchHHHHHHHhcCC
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHST  493 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~~  493 (555)
                      ||.|++||+.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            34444444444444444444444444

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.08  E-value=1.5e-06  Score=50.88  Aligned_cols=29  Identities=31%  Similarity=0.697  Sum_probs=27.0

Q ss_pred             CCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      +||.|++|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999998864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.07  E-value=2.2e-06  Score=51.62  Aligned_cols=28  Identities=32%  Similarity=0.768  Sum_probs=14.1

Q ss_pred             CCeecc--cccccccChhhHHHHHHhCCCc
Q psy11590        495 RPFVCK--LCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       495 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            445554  4555555555555555555443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.06  E-value=1.6e-06  Score=53.68  Aligned_cols=24  Identities=25%  Similarity=0.436  Sum_probs=11.5

Q ss_pred             CCcceecCCCcccccCHHHHHHHH
Q psy11590        380 DTMRYQCPHCPSLLKTFWTLKEHF  403 (555)
Q Consensus       380 ~~~~~~C~~C~~~f~~~~~L~~H~  403 (555)
                      +++||.|+.|++.|...+.|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            344444444444444444444444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.06  E-value=2.2e-06  Score=50.58  Aligned_cols=30  Identities=27%  Similarity=0.447  Sum_probs=25.0

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERP  496 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~  496 (555)
                      +||.|++||+.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            478888888888888888888888887764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.03  E-value=2.6e-06  Score=50.86  Aligned_cols=27  Identities=30%  Similarity=0.807  Sum_probs=14.5

Q ss_pred             Ceecc--cccccccChhhHHHHHHhCCCc
Q psy11590        496 PFVCK--LCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       496 ~~~C~--~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      ||.|+  .||+.|...+.|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.29  E-value=6.7e-07  Score=52.96  Aligned_cols=28  Identities=25%  Similarity=0.507  Sum_probs=14.1

Q ss_pred             CCeecccccccccChhhHHHHHHhCCCc
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            3455555555555555555555555443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.02  E-value=2e-06  Score=53.91  Aligned_cols=33  Identities=33%  Similarity=0.701  Sum_probs=28.1

Q ss_pred             cCCCcccccccc--chhcccCchHHHHHHHhcCCCC
Q psy11590        462 HENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       462 H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      |.++ +||.|++  ||+.|...+.|..|+++|++++
T Consensus         3 ~~~~-k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKK-KQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSC-CCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCC-CCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4555 8999985  9999999999999999998874

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.02  E-value=2.4e-06  Score=50.99  Aligned_cols=29  Identities=28%  Similarity=0.729  Sum_probs=24.5

Q ss_pred             cccccc--cchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACD--ICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +||.|+  .||+.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            478887  89999999999999998888864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=1.8e-06  Score=50.50  Aligned_cols=26  Identities=31%  Similarity=0.640  Sum_probs=12.3

Q ss_pred             CeecccccccccChhhHHHHHHhCCC
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      ||.|++|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            44444444444444444444444443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=2.1e-06  Score=50.21  Aligned_cols=27  Identities=26%  Similarity=0.586  Sum_probs=13.7

Q ss_pred             ccccccchhcccCchHHHHHHHhcCCC
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      ||.|++||+.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            445555555555555555555555443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=1.8e-06  Score=50.51  Aligned_cols=29  Identities=38%  Similarity=0.753  Sum_probs=27.1

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999999874

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.3e-07  Score=52.39  Aligned_cols=27  Identities=26%  Similarity=0.656  Sum_probs=13.7

Q ss_pred             CeecccccccccChhhHHHHHHhCCCc
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      ||.|++|++.|...++|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            445555555555555555555555443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.4e-07  Score=52.37  Aligned_cols=29  Identities=28%  Similarity=0.708  Sum_probs=24.6

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +||.|++||+.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47889999999999999999988888764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=2.5e-06  Score=50.31  Aligned_cols=29  Identities=38%  Similarity=0.788  Sum_probs=25.2

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +||.|++||+.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            68899999999999999999999888764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.00  E-value=2.2e-06  Score=57.43  Aligned_cols=34  Identities=32%  Similarity=0.643  Sum_probs=26.2

Q ss_pred             cCCCccccccccchhcccCchHHHHHHH-hcCCCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAA-VHSTERP  496 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~  496 (555)
                      |.++ +||.|.+||+.|.....|..|++ +|+++.+
T Consensus         2 Ht~~-kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRD-KPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTT-SCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCC-cCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5566 88899999999988889999988 8887653

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.00  E-value=2.9e-06  Score=48.71  Aligned_cols=26  Identities=31%  Similarity=0.621  Sum_probs=14.6

Q ss_pred             CeecccccccccChhhHHHHHHhCCC
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      ||+|++|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35555566666555566666555554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=2e-06  Score=50.31  Aligned_cols=29  Identities=24%  Similarity=0.334  Sum_probs=27.0

Q ss_pred             CCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998864

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.95  E-value=3.3e-06  Score=48.44  Aligned_cols=27  Identities=26%  Similarity=0.735  Sum_probs=19.6

Q ss_pred             ccccccchhcccCchHHHHHHHhcCCC
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      ||.|++||+.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            477888888888888888888777653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.93  E-value=5.4e-06  Score=49.81  Aligned_cols=29  Identities=21%  Similarity=0.628  Sum_probs=25.7

Q ss_pred             cccccc--cchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACD--ICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +||.|+  .||+.|.....|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            789998  89999999999999999998864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=1.4e-06  Score=51.46  Aligned_cols=29  Identities=31%  Similarity=0.673  Sum_probs=25.3

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +||.|++||+.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            68999999999999999999999988764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.90  E-value=4.1e-06  Score=48.55  Aligned_cols=27  Identities=30%  Similarity=0.701  Sum_probs=22.3

Q ss_pred             cccccccchhcccCchHHHHHHHhcCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHST  493 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~  493 (555)
                      +||.|++||+.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            678888888888888888888888764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.89  E-value=5.4e-06  Score=48.86  Aligned_cols=27  Identities=37%  Similarity=0.725  Sum_probs=13.7

Q ss_pred             CeecccccccccChhhHHHH-HHhCCCc
Q psy11590        496 PFVCKLCGIAYKWRKNLVRH-QKNCKAS  522 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H-~~~h~~~  522 (555)
                      ||.|+.|++.|.+.+.|..| +++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45555555555555555555 3444443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.88  E-value=9.2e-06  Score=58.11  Aligned_cols=31  Identities=26%  Similarity=0.498  Sum_probs=14.3

Q ss_pred             CCCccccccccccccCHHHHHHHHHhcCCCC
Q psy11590        408 SEKKYVCELCGAYFIHKSSLVAHTTTHSNVK  438 (555)
Q Consensus       408 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  438 (555)
                      +++||.|..|++.|.....|..|+++|++..
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            3444444444444444444444444444433

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.88  E-value=5.4e-06  Score=48.87  Aligned_cols=29  Identities=31%  Similarity=0.644  Sum_probs=23.7

Q ss_pred             cccccccchhcccCchHHHHH-HHhcCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKH-AAVHSTER  495 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H-~~~H~~~~  495 (555)
                      +||.|+.||+.|...+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            478888888888888888888 67888764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.86  E-value=4.5e-06  Score=47.98  Aligned_cols=26  Identities=23%  Similarity=0.363  Sum_probs=21.1

Q ss_pred             cccccccchhcccCchHHHHHHHhcC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHS  492 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~  492 (555)
                      +||.|++||+.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            67888888888888888888887774

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.85  E-value=6.1e-06  Score=47.35  Aligned_cols=26  Identities=31%  Similarity=0.533  Sum_probs=21.0

Q ss_pred             cccccccchhcccCchHHHHHHHhcC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHS  492 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~  492 (555)
                      +||.|++||+.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            67888888888888888888888774

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.83  E-value=2.1e-06  Score=57.21  Aligned_cols=37  Identities=22%  Similarity=0.390  Sum_probs=31.0

Q ss_pred             HHhhhcCCCccccccc--cchhcccCchHHHHHHHhcCCCC
Q psy11590        457 HISTVHENKWKSAACD--ICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       457 H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      |... |.++ +||.|+  .||+.|...+.|..|+++|++++
T Consensus         9 ~~~~-H~~~-k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            9 KYVK-EMPD-KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSCE-EETT-TEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHhc-cCCC-CCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3444 6676 999996  69999999999999999999874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.03  E-value=2.5e-06  Score=48.54  Aligned_cols=24  Identities=29%  Similarity=0.755  Sum_probs=13.0

Q ss_pred             CeecccccccccChhhHHHHHHhC
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      ||.|++||+.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555544

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.99  E-value=3.1e-06  Score=48.15  Aligned_cols=26  Identities=31%  Similarity=0.732  Sum_probs=20.3

Q ss_pred             cccccccchhcccCchHHHHHHHhcC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHS  492 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~  492 (555)
                      +||.|++||+.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            46788888888888888888887763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.64  E-value=2.5e-05  Score=45.41  Aligned_cols=25  Identities=36%  Similarity=0.729  Sum_probs=15.1

Q ss_pred             Ceecc--cccccccChhhHHHHHHhCC
Q psy11590        496 PFVCK--LCGIAYKWRKNLVRHQKNCK  520 (555)
Q Consensus       496 ~~~C~--~C~~~f~~~~~L~~H~~~h~  520 (555)
                      ||.|.  .|++.|...+.|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            55666  66666666666666666554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.58  E-value=2.5e-05  Score=45.35  Aligned_cols=27  Identities=30%  Similarity=0.733  Sum_probs=21.5

Q ss_pred             cccccc--cchhcccCchHHHHHHHhcCC
Q psy11590        467 KSAACD--ICGRVFLDSKNMKKHAAVHST  493 (555)
Q Consensus       467 ~~~~C~--~C~k~f~~~~~L~~H~~~H~~  493 (555)
                      +||.|+  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            467888  888888888888888888764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.29  E-value=0.00028  Score=50.07  Aligned_cols=46  Identities=17%  Similarity=0.351  Sum_probs=29.6

Q ss_pred             chhcccCchHHHHHH-HhcCCCC------Ceecc--cccccccChhhHHHHHHhC
Q psy11590        474 CGRVFLDSKNMKKHA-AVHSTER------PFVCK--LCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       474 C~k~f~~~~~L~~H~-~~H~~~~------~~~C~--~C~~~f~~~~~L~~H~~~h  519 (555)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            666666666666665 3555443      67775  5777777777777777654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.87  E-value=0.0012  Score=46.69  Aligned_cols=47  Identities=21%  Similarity=0.294  Sum_probs=23.6

Q ss_pred             ChhhcCChHHHHHHHhhhcCCCc-----cccccc--cchhcccCchHHHHHHHh
Q psy11590        444 CEKVYSHRNRLRYHISTVHENKW-----KSAACD--ICGRVFLDSKNMKKHAAV  490 (555)
Q Consensus       444 C~~~f~~~~~L~~H~~~~H~~~~-----~~~~C~--~C~k~f~~~~~L~~H~~~  490 (555)
                      |++.|.+...|..|+...|.+..     .+|.|.  .|++.+.....|..|++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            55555555555555543343321     145554  455555555555555554

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.66  E-value=0.00029  Score=57.82  Aligned_cols=28  Identities=14%  Similarity=0.333  Sum_probs=20.6

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHH
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQK  517 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~  517 (555)
                      .+.+.+.|.|.+|++.|.+...|..|+.
T Consensus        87 ~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           87 SDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             ccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3456667778888888888888877764

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.19  E-value=0.023  Score=49.20  Aligned_cols=104  Identities=17%  Similarity=0.324  Sum_probs=72.8

Q ss_pred             ccccccccccCHH-----HHHHHHHhcCCCCccC--CCChhhcCChHHHHHHHhhhcCCCccccccccchhcccCchHHH
Q psy11590        413 VCELCGAYFIHKS-----SLVAHTTTHSNVKFKC--DFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMK  485 (555)
Q Consensus       413 ~C~~C~~~f~~~~-----~L~~H~~~H~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~  485 (555)
                      .|+.|...+....     .+..-+.   +....|  ..|+.... ...|..|+.. =..  ++..|+.|+..+ ....|.
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~---~l~v~C~n~GC~~~~~-~~~l~~H~~~-C~~--~~v~C~~C~~~~-~r~~l~  126 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL---SLMVKCPNEGCLHKME-LRHLEDHQAH-CEF--ALMDCPQCQRPF-QKFHIN  126 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH---TSEEECCSTTCCCEEE-GGGHHHHHTT-CTT--SEEECTTTCCEE-EGGGHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh---hcccCCCCCCCCceec-HhHHHHHHhc-CCc--eeeECCCCChHH-HHHHHH
Confidence            7999988776532     1222221   235667  45877664 5677888743 222  678999999988 678899


Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCcccc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKC  525 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  525 (555)
                      .|+...-..++-.|+.|+..+. ...|..|..++.|+.++
T Consensus       127 ~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          127 IHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             HHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             HHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            9998888888899999999875 56789999999988764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.92  E-value=0.0017  Score=52.04  Aligned_cols=33  Identities=15%  Similarity=0.119  Sum_probs=27.0

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      +...|+|++||.|..|++.|.+.+.|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            345688888999999999999999999888753

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.63  E-value=0.011  Score=48.35  Aligned_cols=75  Identities=16%  Similarity=0.262  Sum_probs=50.2

Q ss_pred             cceecCCCcccccCHHHHHHHH--hhccCC-Cccccccc------cccccCHHHHHHHHHhcCCC-CccCCCChhhcCCh
Q psy11590        382 MRYQCPHCPSLLKTFWTLKEHF--NIHTSE-KKYVCELC------GAYFIHKSSLVAHTTTHSNV-KFKCDFCEKVYSHR  451 (555)
Q Consensus       382 ~~~~C~~C~~~f~~~~~L~~H~--~~H~~~-~~~~C~~C------~~~f~~~~~L~~H~~~H~~~-~~~C~~C~~~f~~~  451 (555)
                      +++.|.+|+..|.+...+..|.  +.|... +.+.+...      +..+....    +...+.+. .|.|.+|++.|.+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            4689999999999999999998  556432 33433111      12222111    11122332 78999999999999


Q ss_pred             HHHHHHHhh
Q psy11590        452 NRLRYHIST  460 (555)
Q Consensus       452 ~~L~~H~~~  460 (555)
                      ..|..|+..
T Consensus       107 ~~~~~H~~g  115 (127)
T 1zu1_A          107 VVAESHYIG  115 (127)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHCC
Confidence            999999865

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.76  E-value=0.0099  Score=51.56  Aligned_cols=104  Identities=16%  Similarity=0.264  Sum_probs=70.8

Q ss_pred             ecCCCcccccCHH-----HHHHHHhhccCCCcccc--ccccccccCHHHHHHHHHhcCCCCccCCCChhhcCChHHHHHH
Q psy11590        385 QCPHCPSLLKTFW-----TLKEHFNIHTSEKKYVC--ELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYH  457 (555)
Q Consensus       385 ~C~~C~~~f~~~~-----~L~~H~~~H~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H  457 (555)
                      .|+.|...+....     .+..-+    ......|  .-|+.... ...|..|+..=.-.+..|+.|+..+ .+..|..|
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i----~~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H  128 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREI----LSLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIH  128 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHH----HTSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHH----hhcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHH
Confidence            7999987765431     122222    2345667  46887664 5678888754444478899999988 67789999


Q ss_pred             HhhhcCCCccccccccchhcccCchHHHHHHHhcCCCCCe
Q psy11590        458 ISTVHENKWKSAACDICGRVFLDSKNMKKHAAVHSTERPF  497 (555)
Q Consensus       458 ~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~  497 (555)
                      +...-..  ++-.|+.|+..+. ...|..|..+++|+.++
T Consensus       129 ~~~~C~~--r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          129 ILKDCPR--RQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             HHHTCTT--CEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             hhhhCCC--CCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            8763333  7788999999885 57889999999988764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.64  E-value=0.0083  Score=48.04  Aligned_cols=28  Identities=25%  Similarity=0.402  Sum_probs=15.9

Q ss_pred             hccCCCccccccccccccCHHHHHHHHH
Q psy11590        405 IHTSEKKYVCELCGAYFIHKSSLVAHTT  432 (555)
Q Consensus       405 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~  432 (555)
                      .|+|++||.|..|++.|.+...|..|++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            3555555555555555555555555543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.54  E-value=0.02  Score=36.40  Aligned_cols=28  Identities=18%  Similarity=0.411  Sum_probs=19.4

Q ss_pred             CCeecccccccccChhhHHHHHHhCCCc
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      .+|.|+.|+..|.....|+.||+..-++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            4577777777777777777777754443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.40  E-value=0.022  Score=36.21  Aligned_cols=24  Identities=17%  Similarity=0.418  Sum_probs=18.7

Q ss_pred             CcccCCCCCccCCCchHHHhHHHh
Q psy11590        229 RKFSCSHCGNSYKNPIFLKRHFRE  252 (555)
Q Consensus       229 ~~~~C~~C~~~f~~~~~L~~H~~~  252 (555)
                      .+|.|+.|+..|+....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            467788888888888888888874

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.34  E-value=0.14  Score=30.50  Aligned_cols=27  Identities=30%  Similarity=0.525  Sum_probs=19.6

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCC
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHEN  464 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  464 (555)
                      .|.||+|-+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            577777777777777777777776654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=85.77  E-value=0.48  Score=28.12  Aligned_cols=20  Identities=20%  Similarity=0.378  Sum_probs=10.2

Q ss_pred             cccccchhcccCchHHHHHH
Q psy11590        469 AACDICGRVFLDSKNMKKHA  488 (555)
Q Consensus       469 ~~C~~C~k~f~~~~~L~~H~  488 (555)
                      |.|++|.+.|.+...|..|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hy   25 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHY   25 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHH
Confidence            45555555555555555553

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=82.92  E-value=1.3  Score=26.37  Aligned_cols=25  Identities=20%  Similarity=0.497  Sum_probs=18.9

Q ss_pred             CCCeecccccccccChhhHHHHHHh
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      ..++.|..|+.+|..-.++..|++.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            3457788888888888888888764

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=82.39  E-value=0.38  Score=34.60  Aligned_cols=56  Identities=20%  Similarity=0.330  Sum_probs=37.0

Q ss_pred             ccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhCCCcccc
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKASAKC  525 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  525 (555)
                      .|.|..||..+. +..|..|...-.+...|.|-.|++.|.. ..++.|..--...+.|
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~HtsCISEaeKY   65 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVKCISEGQKY   65 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCCCCSCTTSS
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEeeeCChhhee
Confidence            477888886664 5677788766666667888888888874 5566665433444434

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=80.13  E-value=2.5  Score=27.63  Aligned_cols=49  Identities=22%  Similarity=0.431  Sum_probs=30.6

Q ss_pred             cccccchhcccCchHHHHHHHhcCCCCCeecccccc-cccChhhHHHHHHhCC
Q psy11590        469 AACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGI-AYKWRKNLVRHQKNCK  520 (555)
Q Consensus       469 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~-~f~~~~~L~~H~~~h~  520 (555)
                      -.|++|.....+...|..|...-...   +|++|-. ...+.+.|+.|.+++.
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfkvCk   53 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYSICK   53 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHTTCC
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHHHhc
Confidence            45777777777777777776554322   4666632 3356777777776653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	555
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2epra1	35	g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [	0.004

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 14/35 (40%)

Query: 405 IHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKF 439
            HT EK Y C  C   F  K  L  H   + +  F
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 8e-04
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKF 231
           HT EK Y C  C  +F     L+ H   + D  F
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 4e-05
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 405 IHTSEKKYVCELCGAYFIHKSSLVAHTTTHS 435
           IH+ EK Y C  CG  F   S LV H   H+
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.002
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSH 226
           H+ EK Y C  CG +F   S L  H+  H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 490 VHSTERPFVCKLCGIAYKWRKNLVRHQK 517
           +HS E+P+ C  CG A+     LV+HQ+
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQR 28

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 4e-04
 Identities = 9/36 (25%), Positives = 10/36 (27%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV 437
                T  K + C  C   F     L  H   H  V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 4e-04
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS 435
                   ++Y C+ CG  F H S L  H  TH+
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 405 IHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
            H+ EK Y C +C A F    ++  H    
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.004
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query: 467 KSAACDICGRVFLDSKNMKKHAAVHSTERPF 497
           K  AC+ICG++F D  ++ +H   HS E+P+
Sbjct: 4   KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	555
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.62
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.51
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.23
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.2
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.19
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.18
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.13
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.06
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.96
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.96
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.95
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.95
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.94
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.93
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.93
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.91
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.9
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.87
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.87
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.79
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.74
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.72
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.69
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.66
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.65
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.63
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.63
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.61
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.6
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.58
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.54
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.39
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.34
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.33
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.27
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.23
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.23
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.2
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.12
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.07
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.05
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.85
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.81
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.8
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.77
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.74
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.68
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.66
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.6
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.59
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.51
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.47
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.47
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.46
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.39
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.3
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.27
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.24
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.21
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.2
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.14
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.11
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.97
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.97
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.9
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.74
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.67
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.67
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.6
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.59
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.53
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.47
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.39
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.38
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.38
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.34
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.33
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.15
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.89
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.73
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.62
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.62
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.42
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.17
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.01
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.92
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.82
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.12
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.98
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.92
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.74
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.65
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.23
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.04
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.35
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.33
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	91.25
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.02
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.68
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.07
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.3
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.84
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.6
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.45
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	85.75
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	85.53
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.2
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	84.43
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	83.63
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	83.06
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	83.06
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	82.27
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	82.02
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	81.95
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	81.7
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	81.7
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	80.33

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.2e-16  Score=108.93  Aligned_cols=52  Identities=33%  Similarity=0.719  Sum_probs=50.4

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCCCeecccccccccChhhHHHHHHhC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      |||+|+ ||+.|..+.+|..|+++|+|++||.|++||++|.+.+.|..||++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            899995 9999999999999999999999999999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=5.5e-15  Score=100.44  Aligned_cols=53  Identities=28%  Similarity=0.568  Sum_probs=46.6

Q ss_pred             CcceecCCCcccccCHHHHHHHHhhccCCCccccccccccccCHHHHHHHHHhc
Q psy11590        381 TMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH  434 (555)
Q Consensus       381 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H  434 (555)
                      ++||.|+ ||+.|.....|..|+++|+|++||.|++||++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4688994 9999999999999999999999999999999999999999998876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=8.3e-13  Score=81.35  Aligned_cols=37  Identities=16%  Similarity=0.493  Sum_probs=33.8

Q ss_pred             HHHHhcCCCCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       486 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      +|+++|++++||+|++||++|.+.++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4788999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.6e-12  Score=74.87  Aligned_cols=33  Identities=36%  Similarity=0.703  Sum_probs=28.9

Q ss_pred             hcCCCCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        490 VHSTERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       490 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      +|+||+||+|.+||++|.++++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588899999999999999999999999988875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=6.5e-12  Score=76.95  Aligned_cols=35  Identities=20%  Similarity=0.483  Sum_probs=18.0

Q ss_pred             CCCeecccccccccChhhHHHHHH-hCCCccccCcc
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQK-NCKASAKCSLM  528 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~~~  528 (555)
                      ++||+|.+||+.|.+.++|..||+ +|.|++||.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            455555555555555555555543 35555555553

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=4e-12  Score=77.91  Aligned_cols=35  Identities=34%  Similarity=0.800  Sum_probs=32.4

Q ss_pred             cccccccchhcccCchHHHHHHH-hcCCCCCeeccc
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAA-VHSTERPFVCKL  501 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~  501 (555)
                      |||+|.+||+.|...+.|..|++ +|+||+||+|++
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            89999999999999999999985 799999999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=5.6e-12  Score=76.34  Aligned_cols=34  Identities=24%  Similarity=0.564  Sum_probs=31.5

Q ss_pred             HhcCCCCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        489 AVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       489 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      |+|+||+||+|.+||++|.++++|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5799999999999999999999999999999876

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=6.2e-12  Score=76.76  Aligned_cols=35  Identities=20%  Similarity=0.393  Sum_probs=32.1

Q ss_pred             HHHhcCCCCCeecccccccccChhhHHHHHHhCCC
Q psy11590        487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       487 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      |.|+|+||+||+|++|+++|.++++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.2e-11  Score=73.53  Aligned_cols=34  Identities=21%  Similarity=0.461  Sum_probs=30.2

Q ss_pred             HhcCCCCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        489 AVHSTERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       489 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      |+|+||+||+|++|++.|+++++|+.|++.+|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            5799999999999999999999999998776654

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=4.1e-11  Score=71.33  Aligned_cols=32  Identities=38%  Similarity=0.688  Sum_probs=27.8

Q ss_pred             cCCCCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        491 HSTERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       491 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      |+||+||+|++|++.|.++++|..|+++|.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68899999999999999999999999988764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.96  E-value=1.7e-10  Score=65.62  Aligned_cols=29  Identities=31%  Similarity=0.697  Sum_probs=16.6

Q ss_pred             CCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      +||+|++||++|++.+.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35555555555555555555555555553

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=8.5e-11  Score=72.16  Aligned_cols=37  Identities=30%  Similarity=0.557  Sum_probs=25.9

Q ss_pred             HHHhhccCCCccccccccccccCHHHHHHHHHhcCCC
Q psy11590        401 EHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV  437 (555)
Q Consensus       401 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  437 (555)
                      +|+++|++++||.|+.||++|...+.|..|+++|+++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3666777777777777777777777777777777664

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.95  E-value=1.4e-10  Score=65.93  Aligned_cols=29  Identities=31%  Similarity=0.787  Sum_probs=27.1

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +||.|++||++|...+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.4e-10  Score=67.93  Aligned_cols=32  Identities=34%  Similarity=0.644  Sum_probs=29.9

Q ss_pred             cCCCccccccccchhcccCchHHHHHHHhcCCC
Q psy11590        462 HENKWKSAACDICGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       462 H~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      |+++ +||+|.+||++|..++.|..|+++|+||
T Consensus         2 HTge-kpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGE-KPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTC-CCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCC-CCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            7777 9999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.5e-10  Score=68.92  Aligned_cols=35  Identities=31%  Similarity=0.494  Sum_probs=24.3

Q ss_pred             hhccCCCccccccccccccCHHHHHHHHHhcCCCC
Q psy11590        404 NIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVK  438 (555)
Q Consensus       404 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  438 (555)
                      ++|+|++||.|++||++|...+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            46777777777777777777777777777776543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.93  E-value=3.7e-11  Score=77.32  Aligned_cols=41  Identities=20%  Similarity=0.406  Sum_probs=34.9

Q ss_pred             hHHHHHHHhcCCCCCeeccc--ccccccChhhHHHHHHhCCCcc
Q psy11590        482 KNMKKHAAVHSTERPFVCKL--CGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       482 ~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      ..|..|+. |+||+||+|.+  |++.|..+++|..|+++|+|++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45566774 99999999987  9999999999999999999885

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.3e-10  Score=65.20  Aligned_cols=28  Identities=21%  Similarity=0.659  Sum_probs=17.3

Q ss_pred             CCCeecccccccccChhhHHHHHHhCCC
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      |+||+|++|++.|.++++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4566666666666666666666666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=3.1e-10  Score=64.33  Aligned_cols=29  Identities=31%  Similarity=0.655  Sum_probs=15.8

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      |||.|++||++|..++.|..|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            35555555555555555555555555543

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=3.3e-10  Score=68.95  Aligned_cols=35  Identities=23%  Similarity=0.307  Sum_probs=25.9

Q ss_pred             HHhhccCCCccccccccccccCHHHHHHHHHhcCC
Q psy11590        402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSN  436 (555)
Q Consensus       402 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  436 (555)
                      |.++|+|++||.|++|+++|..++.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56777777777777777777777777777777753

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2.6e-10  Score=68.43  Aligned_cols=32  Identities=34%  Similarity=0.808  Sum_probs=22.8

Q ss_pred             ccccc--chhcccCchHHHHHHHhcCCCCCeecc
Q psy11590        469 AACDI--CGRVFLDSKNMKKHAAVHSTERPFVCK  500 (555)
Q Consensus       469 ~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~  500 (555)
                      |.|++  ||++|..+..|++|+++|+|++||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56665  777777777777777777777777775

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=3.6e-10  Score=64.06  Aligned_cols=29  Identities=21%  Similarity=0.474  Sum_probs=27.9

Q ss_pred             CCeecccccccccChhhHHHHHHhCCCcc
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      +||.|++||++|.+++.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=6.2e-10  Score=62.35  Aligned_cols=27  Identities=33%  Similarity=0.609  Sum_probs=25.1

Q ss_pred             cccccccchhcccCchHHHHHHHhcCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHST  493 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~  493 (555)
                      |||+|++||+.|..++.|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            899999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=1.5e-09  Score=64.42  Aligned_cols=31  Identities=23%  Similarity=0.624  Sum_probs=15.5

Q ss_pred             ccCCCccccccccccccCHHHHHHHHHhcCC
Q psy11590        406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSN  436 (555)
Q Consensus       406 H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  436 (555)
                      |+|++||+|++|++.|..+..|..|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3445555555555555555555555555443

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1.5e-09  Score=65.10  Aligned_cols=32  Identities=25%  Similarity=0.519  Sum_probs=30.7

Q ss_pred             eeccc--ccccccChhhHHHHHHhCCCccccCcc
Q psy11590        497 FVCKL--CGIAYKWRKNLVRHQKNCKASAKCSLM  528 (555)
Q Consensus       497 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~  528 (555)
                      |.|++  ||+.|.+++.|++|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            78987  999999999999999999999999996

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.6e-09  Score=64.20  Aligned_cols=28  Identities=32%  Similarity=0.664  Sum_probs=17.2

Q ss_pred             hccCCCccccccccccccCHHHHHHHHH
Q psy11590        405 IHTSEKKYVCELCGAYFIHKSSLVAHTT  432 (555)
Q Consensus       405 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~  432 (555)
                      +|+|++||.|++|++.|..+.+|..|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~   29 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHIL   29 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcc
Confidence            5666666666666666666666666653

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=2.1e-09  Score=58.39  Aligned_cols=25  Identities=32%  Similarity=0.756  Sum_probs=15.9

Q ss_pred             CCeecccccccccChhhHHHHHHhC
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      +||+|..||++|.+++.|..|+|+|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4666666666666666666666665

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=4.6e-09  Score=59.76  Aligned_cols=26  Identities=27%  Similarity=0.608  Sum_probs=12.9

Q ss_pred             Ceeccc--ccccccChhhHHHHHHhCCC
Q psy11590        496 PFVCKL--CGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       496 ~~~C~~--C~~~f~~~~~L~~H~~~h~~  521 (555)
                      ||+|++  |+++|.+.+.|+.|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            444544  55555555555555555544

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=6.6e-09  Score=59.11  Aligned_cols=28  Identities=29%  Similarity=0.619  Sum_probs=26.9

Q ss_pred             ccccccc--chhcccCchHHHHHHHhcCCC
Q psy11590        467 KSAACDI--CGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       467 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      |||+|++  ||++|..++.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999997

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=3.7e-09  Score=57.43  Aligned_cols=26  Identities=27%  Similarity=0.657  Sum_probs=22.4

Q ss_pred             cccccccchhcccCchHHHHHHHhcC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHS  492 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~  492 (555)
                      |||+|+.|||+|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58888888888888888888888884

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=4.6e-09  Score=59.91  Aligned_cols=27  Identities=26%  Similarity=0.672  Sum_probs=13.4

Q ss_pred             cccccc--chhcccCchHHHHHHHhcCCC
Q psy11590        468 SAACDI--CGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       468 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      ||+|++  ||++|...+.|.+|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            455544  555555555555555555443

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=9.7e-09  Score=59.11  Aligned_cols=29  Identities=31%  Similarity=0.801  Sum_probs=15.3

Q ss_pred             CCeecc--cccccccChhhHHHHHHhCCCcc
Q psy11590        495 RPFVCK--LCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       495 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      +||.|+  .||++|++.++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            355553  25555555555555555555543

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=6.3e-09  Score=59.34  Aligned_cols=28  Identities=29%  Similarity=0.661  Sum_probs=26.7

Q ss_pred             CCeeccc--ccccccChhhHHHHHHhCCCc
Q psy11590        495 RPFVCKL--CGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       495 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      +||.|++  ||++|++.+.|..|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999988  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.1e-08  Score=58.88  Aligned_cols=29  Identities=28%  Similarity=0.729  Sum_probs=25.7

Q ss_pred             cccccc--cchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACD--ICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +||.|+  .||++|...+.|.+|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            589996  49999999999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.54  E-value=3.7e-09  Score=67.77  Aligned_cols=40  Identities=20%  Similarity=0.424  Sum_probs=34.3

Q ss_pred             HHHHHHhhhcCCCcccccccc--chhcccCchHHHHHHHhcCCCC
Q psy11590        453 RLRYHISTVHENKWKSAACDI--CGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       453 ~L~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      .|..|+ . |.++ +||+|++  |++.|..++.|..|+++|+||+
T Consensus         6 ~l~~h~-~-h~ge-kpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYV-K-EMPD-KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSC-E-EETT-TEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchh-h-ccCC-CCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            455566 3 6777 9999988  9999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.39  E-value=7.8e-08  Score=55.47  Aligned_cols=28  Identities=32%  Similarity=0.828  Sum_probs=15.9

Q ss_pred             CCCeeccc--ccccccChhhHHHHHHhCCC
Q psy11590        494 ERPFVCKL--CGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       494 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  521 (555)
                      |+||.|++  |++.|+..++|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            45555555  55555555555555555543

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=5.4e-08  Score=54.70  Aligned_cols=26  Identities=27%  Similarity=0.712  Sum_probs=13.3

Q ss_pred             CCeeccc--ccccccChhhHHHHHHhCC
Q psy11590        495 RPFVCKL--CGIAYKWRKNLVRHQKNCK  520 (555)
Q Consensus       495 ~~~~C~~--C~~~f~~~~~L~~H~~~h~  520 (555)
                      +||+|++  |+++|.+.++|.+|+++|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            3455544  5555555555555555554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=5.9e-08  Score=54.55  Aligned_cols=27  Identities=30%  Similarity=0.738  Sum_probs=23.3

Q ss_pred             ccccccc--chhcccCchHHHHHHHhcCC
Q psy11590        467 KSAACDI--CGRVFLDSKNMKKHAAVHST  493 (555)
Q Consensus       467 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~  493 (555)
                      |||+|++  |+++|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5888877  99999999999999988876

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.3e-07  Score=47.38  Aligned_cols=26  Identities=23%  Similarity=0.663  Sum_probs=17.8

Q ss_pred             CeecccccccccChhhHHHHHHhCCC
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      |.+|++|++.|+.+..|..|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777777664

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.3e-07  Score=52.40  Aligned_cols=25  Identities=32%  Similarity=0.695  Sum_probs=13.0

Q ss_pred             CCeeccc--ccccccChhhHHHHHHhC
Q psy11590        495 RPFVCKL--CGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       495 ~~~~C~~--C~~~f~~~~~L~~H~~~h  519 (555)
                      +||.|++  ||++|+..++|++|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3455544  555555555555555554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.23  E-value=3.3e-07  Score=52.81  Aligned_cols=28  Identities=21%  Similarity=0.685  Sum_probs=24.6

Q ss_pred             ccccccc--chhcccCchHHHHHHHhcCCC
Q psy11590        467 KSAACDI--CGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       467 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      +||.|++  ||+.|...+.|.+|+++|+.+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            7899988  999999999999999999764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=1.9e-07  Score=51.74  Aligned_cols=26  Identities=31%  Similarity=0.714  Sum_probs=22.6

Q ss_pred             ccccccc--chhcccCchHHHHHHHhcC
Q psy11590        467 KSAACDI--CGRVFLDSKNMKKHAAVHS  492 (555)
Q Consensus       467 ~~~~C~~--C~k~f~~~~~L~~H~~~H~  492 (555)
                      +||.|++  |||+|...++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5888988  9999999999999998885

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=9.5e-07  Score=46.26  Aligned_cols=29  Identities=31%  Similarity=0.646  Sum_probs=19.7

Q ss_pred             CCCeecccccccccChhhHHHHHHhCCCc
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      |+||+|.+|.+.-...+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46677777777666777777777776663

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=8.9e-07  Score=45.14  Aligned_cols=26  Identities=27%  Similarity=0.776  Sum_probs=17.5

Q ss_pred             ccccccchhcccCchHHHHHHHhcCC
Q psy11590        468 SAACDICGRVFLDSKNMKKHAAVHST  493 (555)
Q Consensus       468 ~~~C~~C~k~f~~~~~L~~H~~~H~~  493 (555)
                      |.+|++|++-|+.+..|..||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            35677777777777777777776664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.05  E-value=1.2e-06  Score=46.32  Aligned_cols=27  Identities=33%  Similarity=0.731  Sum_probs=19.7

Q ss_pred             CCCeecccccccccChhhHHHHHHhCC
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKNCK  520 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~h~  520 (555)
                      |+||.|++||+.|......++|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            567777777777777777777777763

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.4e-06  Score=44.56  Aligned_cols=27  Identities=37%  Similarity=0.765  Sum_probs=20.2

Q ss_pred             CCeeccc--ccccccChhhHHHHHHhCCC
Q psy11590        495 RPFVCKL--CGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       495 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  521 (555)
                      +||.|.+  |+++|+..++|+.|++++||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4777776  77777777777777777665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=5.1e-06  Score=43.91  Aligned_cols=27  Identities=30%  Similarity=0.635  Sum_probs=20.5

Q ss_pred             CceeecCccCccccchhhhhhhhhhcC
Q psy11590        201 EKKYICEVCGTSFLTWSSLNSHKYSHD  227 (555)
Q Consensus       201 ~~~~~C~~C~~~f~~~~~L~~H~~~h~  227 (555)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467788888888887777777777763

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=4.3e-06  Score=45.94  Aligned_cols=28  Identities=43%  Similarity=1.045  Sum_probs=13.7

Q ss_pred             ccccchhcccCchHHHHHHHhcCCCCCe
Q psy11590        470 ACDICGRVFLDSKNMKKHAAVHSTERPF  497 (555)
Q Consensus       470 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~  497 (555)
                      .|..|||.|...-.|.+|...|+||+||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4444555554444444444444444444

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=5.5e-06  Score=43.34  Aligned_cols=28  Identities=21%  Similarity=0.462  Sum_probs=24.5

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      +||+|.+|.+.-.+.+.|..|++.|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            7899999998888889999999988874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.1e-05  Score=44.34  Aligned_cols=32  Identities=22%  Similarity=0.481  Sum_probs=29.5

Q ss_pred             CCeecccccccccChhhHHHHHHhCCCccccC
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKASAKCS  526 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  526 (555)
                      +...|++||+.|..--.|.+|...|.|++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45689999999999999999999999999984

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.3e-05  Score=42.26  Aligned_cols=27  Identities=30%  Similarity=0.503  Sum_probs=16.3

Q ss_pred             cccccchhcccCchHHHHHHHhcCCCC
Q psy11590        469 AACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       469 ~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      |.|+.||.....++.|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            556666666666666666666666553

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.2e-05  Score=43.02  Aligned_cols=24  Identities=33%  Similarity=0.778  Sum_probs=9.3

Q ss_pred             ccccccccccccCHHHHHHHHHhc
Q psy11590        411 KYVCELCGAYFIHKSSLVAHTTTH  434 (555)
Q Consensus       411 ~~~C~~C~~~f~~~~~L~~H~~~H  434 (555)
                      ||.|++|+..|..+..+..|.++|
T Consensus         3 p~~cpic~qrfkrkdrmsyhvrsh   26 (32)
T d2epqa1           3 PYSCPVCGLRFKRKDRMSYHVRSH   26 (32)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHH
T ss_pred             CcccchHHHHhhccccceEeeecc
Confidence            333333333333333333333333

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=1.9e-05  Score=42.25  Aligned_cols=29  Identities=24%  Similarity=0.415  Sum_probs=26.7

Q ss_pred             CcceecCCCcccccCHHHHHHHHhhccCC
Q psy11590        381 TMRYQCPHCPSLLKTFWTLKEHFNIHTSE  409 (555)
Q Consensus       381 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  409 (555)
                      ++||.|++|+..|..+..+..|++.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47899999999999999999999999764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.5e-05  Score=41.48  Aligned_cols=24  Identities=38%  Similarity=0.933  Sum_probs=12.2

Q ss_pred             ccccchhcccCchHHHHHHHhcCC
Q psy11590        470 ACDICGRVFLDSKNMKKHAAVHST  493 (555)
Q Consensus       470 ~C~~C~k~f~~~~~L~~H~~~H~~  493 (555)
                      .|..|||.|.-.+.|++|...|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            345555555555555555555544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=3.3e-05  Score=40.65  Aligned_cols=28  Identities=25%  Similarity=0.509  Sum_probs=26.0

Q ss_pred             CeecccccccccChhhHHHHHHhCCCcc
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      .|.|++||......+.|+.|+|.|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3789999999999999999999999874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=4.3e-05  Score=39.71  Aligned_cols=27  Identities=33%  Similarity=0.481  Sum_probs=24.9

Q ss_pred             CeecccccccccChhhHHHHHHhCCCc
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      ...|..||+.|...+.|++|+.+|+|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357999999999999999999999986

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=2.7e-05  Score=41.79  Aligned_cols=27  Identities=22%  Similarity=0.598  Sum_probs=16.9

Q ss_pred             ccccccc--chhcccCchHHHHHHHhcCC
Q psy11590        467 KSAACDI--CGRVFLDSKNMKKHAAVHST  493 (555)
Q Consensus       467 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~  493 (555)
                      +||.|.+  |+|++..++.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4566665  66666666666666665543

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=3.4e-05  Score=39.46  Aligned_cols=26  Identities=31%  Similarity=0.639  Sum_probs=16.0

Q ss_pred             ccccchhcccCchHHHHHHHhcCCCC
Q psy11590        470 ACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       470 ~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +|+.|.+.|.++-.|+.|.+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46666666666666666666666653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=4.2e-05  Score=39.61  Aligned_cols=25  Identities=32%  Similarity=0.624  Sum_probs=11.9

Q ss_pred             cccccccchhcccCchHHHHHHHhc
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVH  491 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H  491 (555)
                      +||+|..|++.-...+.|..|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            3444444444444444444444444

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=9.9e-05  Score=38.19  Aligned_cols=26  Identities=27%  Similarity=0.526  Sum_probs=24.9

Q ss_pred             CCeecccccccccChhhHHHHHHhCC
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCK  520 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~  520 (555)
                      +||+|..|++.-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.27  E-value=8.7e-05  Score=37.25  Aligned_cols=24  Identities=33%  Similarity=0.661  Sum_probs=17.3

Q ss_pred             eecccccccccChhhHHHHHHhCC
Q psy11590        497 FVCKLCGIAYKWRKNLVRHQKNCK  520 (555)
Q Consensus       497 ~~C~~C~~~f~~~~~L~~H~~~h~  520 (555)
                      |+|.+|..+|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567777777777777777777764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.24  E-value=0.0001  Score=37.64  Aligned_cols=26  Identities=38%  Similarity=0.667  Sum_probs=24.4

Q ss_pred             cCCCChhhcCChHHHHHHHHhccCCC
Q psy11590        155 KCPDCPAILQTFKNLKCHLDIHSGEK  180 (555)
Q Consensus       155 ~C~~C~~~f~~~~~l~~H~~~h~~~~  180 (555)
                      +|+.|.+.|.++..|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999875

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=9.8e-05  Score=39.00  Aligned_cols=27  Identities=22%  Similarity=0.439  Sum_probs=20.3

Q ss_pred             CCeecccccccccChhhHHHHHHhCCC
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      +||+|.+|.+.....++|+.|+++-|+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            477788888777788888888776554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.0001  Score=38.64  Aligned_cols=28  Identities=25%  Similarity=0.596  Sum_probs=26.0

Q ss_pred             CcccCCCChhhcCChHHHHHHHHhccCC
Q psy11590        152 TQYKCPDCPAILQTFKNLKCHLDIHSGE  179 (555)
Q Consensus       152 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  179 (555)
                      ..|.|..|...|..+.+|+.||..|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4689999999999999999999999875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00012  Score=42.57  Aligned_cols=28  Identities=29%  Similarity=0.967  Sum_probs=23.1

Q ss_pred             CCCCCeecccccccccChhhHHHHHHhC
Q psy11590        492 STERPFVCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       492 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      +|.+||.|.+|++.|-++.++.+|.-.+
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            4778999999999999999998886543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.00016  Score=37.92  Aligned_cols=28  Identities=25%  Similarity=0.546  Sum_probs=15.6

Q ss_pred             CCCeecccccccccChhhHHHHHHhCCC
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      |..|.|.+|...|..+-.|+.||..|+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            3445555555555555555555555554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00015  Score=38.17  Aligned_cols=28  Identities=36%  Similarity=0.710  Sum_probs=21.8

Q ss_pred             CCeecccccccccChhhHHHHHHhCCCc
Q psy11590        495 RPFVCKLCGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       495 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      +||+|.+|..--.+.++|..|++.-||+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5788888888778888888888776654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.97  E-value=0.00018  Score=41.78  Aligned_cols=29  Identities=31%  Similarity=0.680  Sum_probs=19.3

Q ss_pred             cccccccchhcccCchHHHHHHHhcCCCC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHSTER  495 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~  495 (555)
                      +.|+|.+|++.|.+..+|--||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45677777777777777777776665443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.0004  Score=36.44  Aligned_cols=24  Identities=33%  Similarity=0.826  Sum_probs=17.5

Q ss_pred             CeecccccccccChhhHHHHHHhC
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h  519 (555)
                      ||.|..|+..|.++.+|..||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            577777777777777777777653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.74  E-value=0.0006  Score=34.15  Aligned_cols=22  Identities=23%  Similarity=0.451  Sum_probs=9.4

Q ss_pred             ecCCCcccccCHHHHHHHHhhc
Q psy11590        385 QCPHCPSLLKTFWTLKEHFNIH  406 (555)
Q Consensus       385 ~C~~C~~~f~~~~~L~~H~~~H  406 (555)
                      +|..|...|..++.|.+|+++|
T Consensus         2 kcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGGT
T ss_pred             cccchHHHHHHHHHHHHHHHhh
Confidence            3444444444444444444433

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.67  E-value=0.00063  Score=35.56  Aligned_cols=24  Identities=38%  Similarity=0.771  Sum_probs=16.6

Q ss_pred             ceecCC--CcccccCHHHHHHHHhhc
Q psy11590        383 RYQCPH--CPSLLKTFWTLKEHFNIH  406 (555)
Q Consensus       383 ~~~C~~--C~~~f~~~~~L~~H~~~H  406 (555)
                      ||+|+.  |++.|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            566765  777777777777776665

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00043  Score=37.40  Aligned_cols=26  Identities=23%  Similarity=0.700  Sum_probs=13.4

Q ss_pred             CCeeccc--ccccccChhhHHHHH-HhCC
Q psy11590        495 RPFVCKL--CGIAYKWRKNLVRHQ-KNCK  520 (555)
Q Consensus       495 ~~~~C~~--C~~~f~~~~~L~~H~-~~h~  520 (555)
                      +||.|++  |.+.|++.++-..|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3555555  555555555555554 4443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00032  Score=37.88  Aligned_cols=28  Identities=32%  Similarity=0.673  Sum_probs=22.8

Q ss_pred             ccccccc--chhcccCchHHHHHH-HhcCCC
Q psy11590        467 KSAACDI--CGRVFLDSKNMKKHA-AVHSTE  494 (555)
Q Consensus       467 ~~~~C~~--C~k~f~~~~~L~~H~-~~H~~~  494 (555)
                      +||.|.+  |.|.|++.+.-..|. |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5788887  888998888888886 888654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.59  E-value=0.00043  Score=36.20  Aligned_cols=25  Identities=28%  Similarity=0.566  Sum_probs=15.6

Q ss_pred             ccccccc--chhcccCchHHHHHHHhc
Q psy11590        467 KSAACDI--CGRVFLDSKNMKKHAAVH  491 (555)
Q Consensus       467 ~~~~C~~--C~k~f~~~~~L~~H~~~H  491 (555)
                      .||+|+.  |++.|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3566654  666666666666666555

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.53  E-value=0.00096  Score=38.70  Aligned_cols=24  Identities=29%  Similarity=0.654  Sum_probs=11.1

Q ss_pred             ccccccccccccCHHHHHHHHHhc
Q psy11590        411 KYVCELCGAYFIHKSSLVAHTTTH  434 (555)
Q Consensus       411 ~~~C~~C~~~f~~~~~L~~H~~~H  434 (555)
                      .|.|.+|++.|.+-.+|--|++.|
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTT
T ss_pred             ccCCCCCCCccCCcccccchHhhh
Confidence            344444444444444444444444

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0009  Score=38.87  Aligned_cols=26  Identities=35%  Similarity=0.714  Sum_probs=18.4

Q ss_pred             cCCCccccccccccccCHHHHHHHHH
Q psy11590        407 TSEKKYVCELCGAYFIHKSSLVAHTT  432 (555)
Q Consensus       407 ~~~~~~~C~~C~~~f~~~~~L~~H~~  432 (555)
                      +|.+||.|.+|++.|....++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            35677777777777777777777753

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.39  E-value=0.00089  Score=36.14  Aligned_cols=27  Identities=22%  Similarity=0.736  Sum_probs=17.0

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcCC
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHEN  464 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  464 (555)
                      ||.|.+|++.|..+.-|.+|....|++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            566666666666666666666665554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00083  Score=35.24  Aligned_cols=23  Identities=39%  Similarity=0.605  Sum_probs=11.9

Q ss_pred             eeecCccCccccchhhhhhhhhh
Q psy11590        203 KYICEVCGTSFLTWSSLNSHKYS  225 (555)
Q Consensus       203 ~~~C~~C~~~f~~~~~L~~H~~~  225 (555)
                      ||.|..|+.+|.++..|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            34555555555555555555543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0013  Score=34.65  Aligned_cols=25  Identities=32%  Similarity=0.751  Sum_probs=10.7

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhc
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVH  462 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H  462 (555)
                      ||.|..|...-...++|+.|+.+.|
T Consensus         2 py~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             Cccccccccccccchhhhhhhhccc
Confidence            3444444444444444444444433

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.34  E-value=0.0013  Score=35.54  Aligned_cols=26  Identities=35%  Similarity=0.797  Sum_probs=20.4

Q ss_pred             CeecccccccccChhhHHHHHHh-CCC
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKN-CKA  521 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~-h~~  521 (555)
                      ||.|.+|++.|+.+..|.+|+.. |.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            78888888888888888888654 443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.33  E-value=0.00094  Score=34.34  Aligned_cols=22  Identities=41%  Similarity=0.940  Sum_probs=19.8

Q ss_pred             CeecccccccccChhhHHHHHH
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQK  517 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~  517 (555)
                      ||+|..||+.|..+.+|..|-.
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999953

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.15  E-value=0.0011  Score=34.77  Aligned_cols=27  Identities=22%  Similarity=0.559  Sum_probs=15.7

Q ss_pred             cccccc--chhcccCchHHHHHHHhcCCC
Q psy11590        468 SAACDI--CGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       468 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      ||.|..  |.|.|.+...|.+|..+|+||
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            555544  666666666666666666553

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0026  Score=33.41  Aligned_cols=26  Identities=27%  Similarity=0.632  Sum_probs=16.5

Q ss_pred             CccCCCChhhcCChHHHHHHHhhhcC
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHISTVHE  463 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~~~~H~  463 (555)
                      ||+|..|.......++|..|++..|+
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            56666666666666666666666554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.73  E-value=0.0032  Score=31.45  Aligned_cols=22  Identities=27%  Similarity=0.676  Sum_probs=18.0

Q ss_pred             CeecccccccccChhhHHHHHH
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQK  517 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~  517 (555)
                      ||+|.-|...|-++.+|+.||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7888888888888888888864

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0035  Score=32.41  Aligned_cols=22  Identities=18%  Similarity=0.499  Sum_probs=11.0

Q ss_pred             ccccchhcccCchHHHHHHHhc
Q psy11590        470 ACDICGRVFLDSKNMKKHAAVH  491 (555)
Q Consensus       470 ~C~~C~k~f~~~~~L~~H~~~H  491 (555)
                      +|+.|.++.+++.+|+.|.|+|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4445555555555555554444

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0049  Score=31.86  Aligned_cols=26  Identities=19%  Similarity=0.323  Sum_probs=23.8

Q ss_pred             CeecccccccccChhhHHHHHHhCCC
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      |-+|+.|.++.+++..|+.|-|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            67899999999999999999999854

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0045  Score=35.45  Aligned_cols=27  Identities=26%  Similarity=0.708  Sum_probs=15.4

Q ss_pred             CCCCeec--ccccccccChhhHHHHHHhC
Q psy11590        493 TERPFVC--KLCGIAYKWRKNLVRHQKNC  519 (555)
Q Consensus       493 ~~~~~~C--~~C~~~f~~~~~L~~H~~~h  519 (555)
                      +++||.|  +-|+.+|.+...|..|.+.|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            3556666  33666666666666665554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.17  E-value=0.0042  Score=32.53  Aligned_cols=28  Identities=29%  Similarity=0.605  Sum_probs=25.4

Q ss_pred             CCeeccc--ccccccChhhHHHHHHhCCCc
Q psy11590        495 RPFVCKL--CGIAYKWRKNLVRHQKNCKAS  522 (555)
Q Consensus       495 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  522 (555)
                      +||.|.+  |.+.|.+-..|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5899977  999999999999999999875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.01  Score=32.68  Aligned_cols=28  Identities=36%  Similarity=0.902  Sum_probs=24.3

Q ss_pred             CeecccccccccChhhHHHHHHhCCCcc
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCKASA  523 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~  523 (555)
                      .|.|..|++.|+.+..+.+|-.++.|..
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~d   31 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGPD   31 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCCC
Confidence            5889999999999999999998888754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.92  E-value=0.0084  Score=29.90  Aligned_cols=19  Identities=37%  Similarity=0.873  Sum_probs=7.8

Q ss_pred             cccccccccccCHHHHHHH
Q psy11590        412 YVCELCGAYFIHKSSLVAH  430 (555)
Q Consensus       412 ~~C~~C~~~f~~~~~L~~H  430 (555)
                      |+|.-|...|..+..|..|
T Consensus         3 ykcsscsqqfmqkkdlqsh   21 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSH   21 (26)
T ss_dssp             EECSSSCCEESSHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHH
Confidence            3444444444444444443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.82  E-value=0.0077  Score=34.49  Aligned_cols=28  Identities=32%  Similarity=0.741  Sum_probs=21.2

Q ss_pred             CCceeec--CccCccccchhhhhhhhhhcC
Q psy11590        200 EEKKYIC--EVCGTSFLTWSSLNSHKYSHD  227 (555)
Q Consensus       200 ~~~~~~C--~~C~~~f~~~~~L~~H~~~h~  227 (555)
                      .++||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4677888  568888888888888877764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.12  E-value=0.012  Score=31.42  Aligned_cols=28  Identities=25%  Similarity=0.590  Sum_probs=18.3

Q ss_pred             ccccccc--chhcccCchHHHHHHHhcCCC
Q psy11590        467 KSAACDI--CGRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       467 ~~~~C~~--C~k~f~~~~~L~~H~~~H~~~  494 (555)
                      +.|.|++  |+..|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4566654  666776666777777666664

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.98  E-value=0.018  Score=29.62  Aligned_cols=24  Identities=29%  Similarity=0.769  Sum_probs=14.3

Q ss_pred             ccCCCChhhcCChHHHHHHHhhhc
Q psy11590        439 FKCDFCEKVYSHRNRLRYHISTVH  462 (555)
Q Consensus       439 ~~C~~C~~~f~~~~~L~~H~~~~H  462 (555)
                      |+||.|+-....++.|+.|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            556666666666666666665544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.92  E-value=0.018  Score=29.45  Aligned_cols=21  Identities=33%  Similarity=0.649  Sum_probs=10.3

Q ss_pred             CccCCCChhhcCChHHHHHHH
Q psy11590        438 KFKCDFCEKVYSHRNRLRYHI  458 (555)
Q Consensus       438 ~~~C~~C~~~f~~~~~L~~H~  458 (555)
                      ||+|+.||+.|-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            344555555555555554443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.026  Score=28.96  Aligned_cols=25  Identities=20%  Similarity=0.422  Sum_probs=18.8

Q ss_pred             CeecccccccccChhhHHHHHHhCC
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKNCK  520 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~h~  520 (555)
                      .|+|+.|+-.-..+++|+.|+++-|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3678888888888888888877643

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.65  E-value=0.019  Score=34.53  Aligned_cols=25  Identities=20%  Similarity=0.353  Sum_probs=21.6

Q ss_pred             ceecCCCcccccCHHHHHHHHhhcc
Q psy11590        383 RYQCPHCPSLLKTFWTLKEHFNIHT  407 (555)
Q Consensus       383 ~~~C~~C~~~f~~~~~L~~H~~~H~  407 (555)
                      .|.|..|+|.|+....|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4889999999999999999987763

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.23  E-value=0.02  Score=34.43  Aligned_cols=26  Identities=35%  Similarity=0.868  Sum_probs=19.4

Q ss_pred             cccccccchhcccCchHHHHHHHhcC
Q psy11590        467 KSAACDICGRVFLDSKNMKKHAAVHS  492 (555)
Q Consensus       467 ~~~~C~~C~k~f~~~~~L~~H~~~H~  492 (555)
                      ..|.|-+|||.|.....|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            34778888888888888888877763

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.04  E-value=0.024  Score=28.32  Aligned_cols=24  Identities=17%  Similarity=0.490  Sum_probs=17.4

Q ss_pred             ccCCCCCccCCCchHHHhHHHhhc
Q psy11590        231 FSCSHCGNSYKNPIFLKRHFRESH  254 (555)
Q Consensus       231 ~~C~~C~~~f~~~~~L~~H~~~~H  254 (555)
                      |.|+.|-+.|..+.++..|+++.|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            667777777777777777777644

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.35  E-value=0.037  Score=30.38  Aligned_cols=28  Identities=18%  Similarity=0.451  Sum_probs=24.3

Q ss_pred             CcccCCCChhhcCChHHHHHHHHhccCC
Q psy11590        152 TQYKCPDCPAILQTFKNLKCHLDIHSGE  179 (555)
Q Consensus       152 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  179 (555)
                      ..|.|..||+.|+.+..+.+|.....|.
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCCC
Confidence            3689999999999999999998876653

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.33  E-value=0.039  Score=30.83  Aligned_cols=20  Identities=25%  Similarity=0.187  Sum_probs=13.2

Q ss_pred             hhcccCchHHHHHHHhcCCC
Q psy11590        475 GRVFLDSKNMKKHAAVHSTE  494 (555)
Q Consensus       475 ~k~f~~~~~L~~H~~~H~~~  494 (555)
                      ++.|...-.|..|||.|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34566667777777777765

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.25  E-value=0.061  Score=26.85  Aligned_cols=22  Identities=23%  Similarity=0.578  Sum_probs=12.0

Q ss_pred             eecccccccccChhhHHHHHHh
Q psy11590        497 FVCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       497 ~~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      |.|+.|=+.|+.+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4455555555555555555543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.02  E-value=0.059  Score=30.06  Aligned_cols=24  Identities=29%  Similarity=0.415  Sum_probs=19.1

Q ss_pred             cCCCcccccCHHHHHHHHhhccCC
Q psy11590        386 CPHCPSLLKTFWTLKEHFNIHTSE  409 (555)
Q Consensus       386 C~~C~~~f~~~~~L~~H~~~H~~~  409 (555)
                      |..=++.|.....|..||+.|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456799999999999999885

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.68  E-value=0.063  Score=29.12  Aligned_cols=22  Identities=41%  Similarity=0.768  Sum_probs=16.9

Q ss_pred             CeecccccccccChhhHHHHHH
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQK  517 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~  517 (555)
                      .|.|.-||..|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4778888888888888888764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.07  E-value=0.11  Score=27.66  Aligned_cols=20  Identities=30%  Similarity=0.718  Sum_probs=9.9

Q ss_pred             CcccccCHHHHHHHHhhccC
Q psy11590        389 CPSLLKTFWTLKEHFNIHTS  408 (555)
Q Consensus       389 C~~~f~~~~~L~~H~~~H~~  408 (555)
                      |+..|.....|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            44555555555555544444

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.30  E-value=0.089  Score=28.50  Aligned_cols=23  Identities=17%  Similarity=0.478  Sum_probs=20.9

Q ss_pred             CcccCCCChhhcCChHHHHHHHH
Q psy11590        152 TQYKCPDCPAILQTFKNLKCHLD  174 (555)
Q Consensus       152 ~~~~C~~C~~~f~~~~~l~~H~~  174 (555)
                      ..|.|.-||..|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            46999999999999999999974

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.84  E-value=0.08  Score=26.89  Aligned_cols=18  Identities=33%  Similarity=0.748  Sum_probs=9.3

Q ss_pred             chhcccCchHHHHHHHhc
Q psy11590        474 CGRVFLDSKNMKKHAAVH  491 (555)
Q Consensus       474 C~k~f~~~~~L~~H~~~H  491 (555)
                      ||+.|.....|+.|..+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555554444

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.60  E-value=0.27  Score=25.57  Aligned_cols=22  Identities=27%  Similarity=0.634  Sum_probs=16.5

Q ss_pred             eecCCCcccccCHHHHHHHHhh
Q psy11590        384 YQCPHCPSLLKTFWTLKEHFNI  405 (555)
Q Consensus       384 ~~C~~C~~~f~~~~~L~~H~~~  405 (555)
                      |.|..||+...+...++.|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            6788888888888888877543

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.45  E-value=0.21  Score=26.00  Aligned_cols=26  Identities=15%  Similarity=0.521  Sum_probs=20.2

Q ss_pred             CCCCccchhhccChhhHHhhhhhhhc
Q psy11590         71 CHSCQKCEESFDNCNNLWSHMFIKHE   96 (555)
Q Consensus        71 ~~~C~~C~~~f~~~~~l~~H~~~h~~   96 (555)
                      -|.|..|++...+...++.|+...|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            36788888888888888888766554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.75  E-value=0.21  Score=32.69  Aligned_cols=39  Identities=21%  Similarity=0.589  Sum_probs=29.3

Q ss_pred             cCCceeecCccCccccchhhhhhhhhhcCCCcccCCCCCcc
Q psy11590        199 TEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNS  239 (555)
Q Consensus       199 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~  239 (555)
                      +....|.|+.|+++|.....+..  .......|.|..|+-.
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L--~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL--FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH--EETTTTEEBCSSSCCB
T ss_pred             ccCCceECCCCCCCcchhhHHHh--cCcCCCeEEecCCCCE
Confidence            45678999999999987665543  3333678999999865

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.53  E-value=0.34  Score=28.77  Aligned_cols=27  Identities=22%  Similarity=0.484  Sum_probs=15.5

Q ss_pred             CCcccCCCCCccCCCchHHHhHHHhhc
Q psy11590        228 DRKFSCSHCGNSYKNPIFLKRHFRESH  254 (555)
Q Consensus       228 ~~~~~C~~C~~~f~~~~~L~~H~~~~H  254 (555)
                      +.|-.|++|+.+.....+|++|+...|
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            445556666666666666666655544

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.20  E-value=0.11  Score=34.72  Aligned_cols=23  Identities=22%  Similarity=0.317  Sum_probs=15.7

Q ss_pred             CeecccccccccChhhHHHHHHh
Q psy11590        496 PFVCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       496 ~~~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      .|-|..|++.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            46677777777777777777653

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.43  E-value=0.25  Score=25.46  Aligned_cols=20  Identities=20%  Similarity=0.549  Sum_probs=17.8

Q ss_pred             CChhhcCChHHHHHHHHhcc
Q psy11590        158 DCPAILQTFKNLKCHLDIHS  177 (555)
Q Consensus       158 ~C~~~f~~~~~l~~H~~~h~  177 (555)
                      -|++.|...++++.|+.+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            39999999999999998873

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.63  E-value=0.41  Score=28.43  Aligned_cols=28  Identities=29%  Similarity=0.500  Sum_probs=18.2

Q ss_pred             CCCeecccccccccChhhHHHHHHhCCC
Q psy11590        494 ERPFVCKLCGIAYKWRKNLVRHQKNCKA  521 (555)
Q Consensus       494 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  521 (555)
                      +.|-.|++|+....+..+|++|+..-|-
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            5566677777777777777777655443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.06  E-value=0.18  Score=33.64  Aligned_cols=26  Identities=23%  Similarity=0.355  Sum_probs=20.9

Q ss_pred             CCceeecCccCccccchhhhhhhhhh
Q psy11590        200 EEKKYICEVCGTSFLTWSSLNSHKYS  225 (555)
Q Consensus       200 ~~~~~~C~~C~~~f~~~~~L~~H~~~  225 (555)
                      |...|.|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            44558899999999988888888765

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=83.06  E-value=0.34  Score=27.75  Aligned_cols=27  Identities=26%  Similarity=0.477  Sum_probs=17.1

Q ss_pred             CcceecCCCcccccCHHHHHHHHhhccCCCcccccccccc
Q psy11590        381 TMRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAY  420 (555)
Q Consensus       381 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~  420 (555)
                      .+.|.|.+||..             +.|+.|-.|++|+..
T Consensus         3 ~~~~vC~vCGyi-------------~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           3 DKFHLCPICGYI-------------HKGEDFEKCPICFRP   29 (36)
T ss_dssp             CCEEECSSSCCE-------------EESSCCSBCTTTCCB
T ss_pred             CCEEECCCCCCE-------------eeCCCCCcCCCCCCc
Confidence            345777777774             334566677777653

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.27  E-value=0.24  Score=27.18  Aligned_cols=29  Identities=17%  Similarity=0.434  Sum_probs=23.0

Q ss_pred             ccCCCCCccchhhccChhhHHhhhhhhhc
Q psy11590         68 FPKCHSCQKCEESFDNCNNLWSHMFIKHE   96 (555)
Q Consensus        68 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   96 (555)
                      +...|.|.+|.+.+...+++-+|...-|.
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            44568899999999999999999876554

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.02  E-value=0.39  Score=24.72  Aligned_cols=18  Identities=39%  Similarity=0.835  Sum_probs=11.0

Q ss_pred             chhcccCchHHHHHHHhc
Q psy11590        474 CGRVFLDSKNMKKHAAVH  491 (555)
Q Consensus       474 C~k~f~~~~~L~~H~~~H  491 (555)
                      |+|.|...++++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            566666666666666555

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.95  E-value=0.27  Score=32.16  Aligned_cols=16  Identities=25%  Similarity=0.729  Sum_probs=7.0

Q ss_pred             ccCCCChhhcCChHHH
Q psy11590        439 FKCDFCEKVYSHRNRL  454 (555)
Q Consensus       439 ~~C~~C~~~f~~~~~L  454 (555)
                      |+||.|++.|+...++
T Consensus        15 y~Cp~C~~~ys~Lda~   30 (62)
T d1vd4a_          15 FKCPVCSSTFTDLEAN   30 (62)
T ss_dssp             EECSSSCCEEEHHHHH
T ss_pred             eECCCCCCCcchhhHH
Confidence            4444444444444333

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.70  E-value=0.41  Score=27.60  Aligned_cols=26  Identities=35%  Similarity=0.697  Sum_probs=16.3

Q ss_pred             cceecCCCcccccCHHHHHHHHhhccCCCcccccccccc
Q psy11590        382 MRYQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAY  420 (555)
Q Consensus       382 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~  420 (555)
                      ..|.|.+||..+             .|+.|-.|++|+..
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCCSBCTTTCCB
T ss_pred             cEEECCCCCCEe-------------cCCCCCcCCCCCCc
Confidence            347777777653             34566677777653

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.70  E-value=0.41  Score=26.24  Aligned_cols=26  Identities=31%  Similarity=0.652  Sum_probs=21.4

Q ss_pred             CCCCeecccccccccChhhHHHHHHh
Q psy11590        493 TERPFVCKLCGIAYKWRKNLVRHQKN  518 (555)
Q Consensus       493 ~~~~~~C~~C~~~f~~~~~L~~H~~~  518 (555)
                      |+..|.|.+|.+.|+.-+++-+|..+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            45678899999999999999888654

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.33  E-value=0.36  Score=30.98  Aligned_cols=31  Identities=32%  Similarity=0.625  Sum_probs=27.1

Q ss_pred             cCCCCcccCCCChhhcCChHHHHHHHHhccC
Q psy11590        148 MNNITQYKCPDCPAILQTFKNLKCHLDIHSG  178 (555)
Q Consensus       148 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  178 (555)
                      ......|+|..|.-.|.+..+|..|+..|..
T Consensus        13 ~~~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          13 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             ccCCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            3456689999999999999999999998864