Psyllid ID: psy11591

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Protein Sequence
MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPGLDPTSCNMSRTLPLYKM
Secondary Structure (PSIPRED)
ccccccccHHcccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEccccHHHHHHHccccccccccccccccEccccHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHcccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccEcccccccEEcccccccEEEcc
Coil and Loop (DISEMBL)
MFKCPQCGALLKNIWSLREHIMihtgerphvchvcsksfrnrgklnvHYKRVHERIRthqcnhcgrafsdksnltVHIRTHTDEKKYMCELCGAEFAQWATLYnhkfthndikfkcnycekvynnpsnlqrhikthtdnslyICEICGkdfgtarylkrhkdthnsVNTFVCEVCNTGFKVKKHLTQHYkshsmfippeqfpgldptscnmsrtlplykm
Flexible Loop (DISEMBL)
MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIrthqcnhcgrafsdksnltVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEqfpgldptscnmsrtlplykm
Low Complexity Region (SEG)
MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPGLDPTSCNMSRTLPLYKM
Disordered region (IsUnstruct)
***CPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI************************
Disordered Region (DISOPRED)
MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPGLDPTSCNMSRTLPLYK*
Disordered Region (DISEMBL)
MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPGLDPTSCNMSRTLPLYKM
Disordered Region (DISPRO)
MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPGLDPTSCNMSRTLPL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPGLDPTSCNMSRTLPLYKM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	220	2.2.26 [Sep-21-2011]
Q6ZMW2	699	Zinc finger protein 782 O	yes	N/A	0.863	0.271	0.416	3e-36
Q9NQX1	630	PR domain zinc finger pro	no	N/A	0.890	0.311	0.395	2e-35
Q9CXE0	599	PR domain zinc finger pro	no	N/A	0.890	0.327	0.395	6e-35
Q03923	595	Zinc finger protein 85 OS	no	N/A	0.845	0.312	0.414	7e-35
P10076	861	Zinc finger protein 26 OS	no	N/A	0.886	0.226	0.370	2e-34
Q9BSG1	425	Zinc finger protein 2 OS=	no	N/A	0.895	0.463	0.391	3e-34
Q8BIQ3	427	Zinc finger protein 2 OS=	no	N/A	0.895	0.461	0.381	3e-34
P16372	489	Zinc finger protein 58 OS	no	N/A	0.890	0.400	0.398	4e-34
Q9UJU3	913	Zinc finger protein 112 O	no	N/A	0.959	0.231	0.353	5e-34
Q6NX49	715	Zinc finger protein 544 O	no	N/A	0.895	0.275	0.396	8e-34

>sp|Q6ZMW2|ZN782_HUMAN Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1

 Score =  151 bits (381), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 2/192 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           +KC +CG   K    LR+H   HTGE+P+ C+ C K+F  + +L  H+ R+H   + ++C
Sbjct: 506 YKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHH-RIHTGEKPYKC 564

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
           NHCG AFS KSNL VH RTHT EK Y CE CG  F Q + L  H+ TH   K ++CN C 
Sbjct: 565 NHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECG 624

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct: 625 KAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFS 684

Query: 181 VKKHLTQHYKSH 192
            K  L +H K+H
Sbjct: 685 QKSSLREHQKAH 696

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q9NQX1|PRDM5_HUMAN PR domain zinc finger protein 5 OS=Homo sapiens GN=PRDM5 PE=1 SV=2

 Score =  148 bits (374), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 111/197 (56%), Gaps = 1/197 (0%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           F+C +C AL +  +SL+ H++IH  ER   CH C  +F+ +  LNVH + VHER + ++C
Sbjct: 404 FQCEECKALFRTPFSLQRHLLIHNSERTFKCHHCDATFKRKDTLNVHVQVVHERHKKYRC 463

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             C +AF   S L  H +THT EK+ +C  CG +FA   TL  H  +H   + ++C YCE
Sbjct: 464 ELCNKAFVTPSVLRSHKKTHTGEKEKICPYCGQKFASSGTLRVHIRSHTGERPYQCPYCE 523

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K ++    L+ HI+THT    Y C  C K F   R L  HK TH     F C+VC+  F 
Sbjct: 524 KGFSKNDGLKMHIRTHTREKPYKCSECSKAFSQKRGLDEHKRTHTGEKPFQCDVCDLAFS 583

Query: 181 VKKHLTQHYKSHSMFIP 197
           +KK L +H  +H+   P
Sbjct: 584 LKKMLIRHKMTHNPNRP 600

Sequence-specific DNA-binding transcription factor. Represses transcription at least in part by recruitment of the histone methyltransferase EHMT2/G9A and histone deacetylases such as HDAC1. Regulates hematopoiesis-associated protein-coding and microRNA (miRNA) genes. May regulate the expression of proteins involved in extracellular matrix development and maintenance, including fibrillar collagens, such as COL4A1 and COL11A1, connective tissue components, such as HAPLN1, and molecules regulating cell migration and adhesion, including EDIL3 and TGFB2. May caused G2/M arrest and apoptosis in cancer cells.

Homo sapiens (taxid: 9606)

>sp|Q9CXE0|PRDM5_MOUSE PR domain zinc finger protein 5 OS=Mus musculus GN=Prdm5 PE=2 SV=2

 Score =  147 bits (370), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 110/197 (55%), Gaps = 1/197 (0%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           F+C  C AL +  +SL+ H++IH  ER   CH C  +F+ +  LNVH + VHER + ++C
Sbjct: 373 FQCDACKALFRTPFSLQRHLLIHNSERTFKCHHCDATFKRKDTLNVHVQVVHERHKKYRC 432

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             C +AF   S L  H +THT EK+ +C  CG +FA   TL  H  +H   + ++C YCE
Sbjct: 433 ELCNKAFVTPSVLRSHKKTHTGEKEKVCPYCGQKFASSGTLRVHIRSHTGERPYQCPYCE 492

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K ++    L+ HI+THT    Y C  C K F   R L  HK TH     F C+VC+  F 
Sbjct: 493 KGFSKNDGLKMHIRTHTREKPYQCSECSKAFSQKRGLDEHKRTHTGEKPFQCDVCDLAFS 552

Query: 181 VKKHLTQHYKSHSMFIP 197
           +KK L +H  +H+   P
Sbjct: 553 LKKMLIRHKMTHNPNRP 569

Sequence-specific DNA-binding transcription factor. Represses transcription at least in part by recruitment of the histone methyltransferase EHMT2/G9A and histone deacetylases such as HDAC1. Regulates hematopoiesis-associated protein-coding and microRNA (miRNA) genes (By similarity). May regulate the expression of proteins involved in extracellular matrix development and maintenance, connective tissue components and molecules regulating cell migration and adhesion. May caused G2/M arrest and apoptosis in cancer cells.

Mus musculus (taxid: 10090)

>sp|Q03923|ZNF85_HUMAN Zinc finger protein 85 OS=Homo sapiens GN=ZNF85 PE=2 SV=3

 Score =  147 bits (370), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 106/188 (56%), Gaps = 2/188 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           +KC +CG   K+  +L +H +IHTGE+P+ C  C K+F    KL  H K++H   + ++C
Sbjct: 398 YKCKECGKAFKHSSTLTKHKIIHTGEKPYKCKECEKAFNQSSKLTEH-KKIHTGEKPYEC 456

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             CG+AF+  SNLT H ++HT+EK Y CE CG  F   +TL  HK  H   K +KC  C 
Sbjct: 457 EKCGKAFNQSSNLTRHKKSHTEEKPYKCEECGKGFKWPSTLTIHKIIHTGEKPYKCEECG 516

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K +N  S L +H K HT    Y CE CGK F  +  L +HK  H     + CE C+  FK
Sbjct: 517 KAFNQSSKLTKHKKIHTGEKPYTCEECGKAFNQSSNLTKHKRIHTGEKPYKCEECDKAFK 576

Query: 181 VKKHLTQH 188
               LT+H
Sbjct: 577 WSSVLTKH 584

May be a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  145 bits (366), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 109/197 (55%), Gaps = 2/197 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           ++C +CG    +   L  HI  H+ ERP  C VC+KSFRN   L  H+ R+H  ++ ++C
Sbjct: 610 YECKECGKGFISFAQLTVHIKTHSSERPFQCKVCTKSFRNSSSLETHF-RIHTGVKPYKC 668

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
           ++CG+AF+ +S LT+H+R HT EK Y C+ CG  F+  + L  H  +H   K F+C++C 
Sbjct: 669 SYCGKAFTARSGLTIHLRNHTGEKSYACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCG 728

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K + + S L  H+K HT    + C +CGK F  + YL  H  TH     F C +C   F 
Sbjct: 729 KAFASSSYLNVHLKIHTGEKPFQCTVCGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFL 788

Query: 181 VKKHLTQHYKSHSMFIP 197
              +L  H + H+   P
Sbjct: 789 WSSYLRVHMRIHTGEKP 805

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9BSG1|ZNF2_HUMAN Zinc finger protein 2 OS=Homo sapiens GN=ZNF2 PE=2 SV=3

 Score =  145 bits (365), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 106/199 (53%), Gaps = 2/199 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           + C +CG    +  SL  H+M HTGE P+ C VCSK+F +R  L VH +R+H   +  QC
Sbjct: 201 YDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAFFDRSSLTVH-QRIHTGEKPFQC 259

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
           N CG+AF D+S+LT H R HT E  Y C  CG  F+Q + L  H+  H   K ++CN C 
Sbjct: 260 NECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKSILTRHQLIHTGRKPYECNECG 319

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K +   S+L RH K H  +  Y C  CGK F     L +H+  H     + C  C   F 
Sbjct: 320 KAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQHQKIHTGDKPYECSECGKAFS 379

Query: 181 VKKHLTQHYKSHSMFIPPE 199
            +  LT+H + H+   P E
Sbjct: 380 QRCRLTRHQRVHTGEKPFE 398

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BIQ3|ZNF2_MOUSE Zinc finger protein 2 OS=Mus musculus GN=Znf2 PE=2 SV=1

 Score =  144 bits (364), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 106/199 (53%), Gaps = 2/199 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           + CP+CG    +  SL  H+M HTGE P+ C  C K+F +R  L VH +R+H   +  +C
Sbjct: 197 YDCPECGKAFSHRSSLSRHLMFHTGESPYECDACGKAFFDRSSLTVH-QRIHTGEKPFKC 255

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
           N CG+AF D+S+LT H R HT E  Y C+ CG  F+Q + L  H  TH   K ++C  C 
Sbjct: 256 NDCGKAFFDRSSLTRHQRIHTGESPYECQQCGKAFSQKSILTRHLLTHTGRKPYECRDCG 315

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K +   ++L RH K HT+   Y C  CGK F     L +H+  H     + C  C   F 
Sbjct: 316 KAFYGVTSLNRHQKVHTEEPRYQCSECGKAFFDRSSLTQHQKIHTGDKPYECGECGKAFS 375

Query: 181 VKKHLTQHYKSHSMFIPPE 199
            +  LT+H + H+   P E
Sbjct: 376 QRCRLTRHQRVHTGEKPFE 394

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|P16372|ZFP58_MOUSE Zinc finger protein 58 OS=Mus musculus GN=Zfp58 PE=2 SV=2

 Score =  144 bits (364), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/198 (39%), Positives = 109/198 (55%), Gaps = 2/198 (1%)

Query: 1   MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQ 60
            FKC +CG    N  +L EH  IHTGE+P+ C  C K+FR R KL+ H +RVH   + ++
Sbjct: 105 AFKCEECGKAFNNRSNLSEHKRIHTGEKPYKCEECGKAFRIRSKLSTH-QRVHTGEKPYK 163

Query: 61  CNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYC 119
           C  CG+AF+  SNL+ H R HT EK Y CE CG  F+  +T Y H+  H   K +KC  C
Sbjct: 164 CEECGKAFNSHSNLSEHKRIHTGEKPYKCEECGKAFSTRSTYYRHQKNHTGKKPYKCEEC 223

Query: 120 EKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGF 179
            K ++ PS L+ H + H+    Y CE CGK F     LK+H+  H++   + C  C   F
Sbjct: 224 AKEFSYPSLLKVHQRIHSAEKSYKCEECGKPFYCPLLLKKHQIIHSAEKPYKCAECGKAF 283

Query: 180 KVKKHLTQHYKSHSMFIP 197
                L +H + H+   P
Sbjct: 284 HYPSLLKRHQRIHAGKKP 301

May have a role during differentiation processes.

Mus musculus (taxid: 10090)

>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2

 Score =  144 bits (362), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 112/215 (52%), Gaps = 4/215 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           ++C +CG        L+ H  +H+GERP++C VC K F  R  L  H +RVH R++ ++C
Sbjct: 693 YQCDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGH-QRVHTRVKPYKC 751

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             CG+ FS  S L  H R HT  K Y CE+C   F++ + L  H+  H + + +KC  C 
Sbjct: 752 EMCGKGFSQSSRLEAHRRVHTGGKPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCG 811

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K ++  S+LQ H + HT    Y CE+CGK F     L+ H+  H     + C+ C  GF+
Sbjct: 812 KGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRSNLQAHQRVHTGEKPYKCDACGKGFR 871

Query: 181 VKKHLTQHYKSHSM--FIPPEQFPGLDPTSCNMSR 213
               L  H + HS   F   E +    P+S N+ R
Sbjct: 872 WSSGLLIHQRVHSSDKFYKSEDYGKDYPSSENLHR 906

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6NX49|ZN544_HUMAN Zinc finger protein 544 OS=Homo sapiens GN=ZNF544 PE=2 SV=1

 Score =  143 bits (361), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 103/199 (51%), Gaps = 2/199 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           FKC QCG      + L  H   HTGE+P+ C++C KSF    KL  H +R+H   + +QC
Sbjct: 492 FKCTQCGKSFSQKYDLVVHQRTHTGEKPYECNLCGKSFSQSSKLITH-QRIHTGEKPYQC 550

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             CG++F   SNL +H R HT EK Y C  CG  F+Q   L  HK TH   K ++CN C 
Sbjct: 551 IECGKSFRWNSNLVIHQRIHTGEKPYDCTHCGKSFSQSYQLVAHKRTHTGEKPYECNECG 610

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K +N  + L RH++ HT    Y C  C K F  + YL  H+ TH     F C  C   F 
Sbjct: 611 KAFNRSTQLIRHLQIHTGEKPYKCNQCNKAFARSSYLVMHQRTHTGEKPFECSQCGKAFS 670

Query: 181 VKKHLTQHYKSHSMFIPPE 199
              +L  H++ HS   P E
Sbjct: 671 GSSNLLSHHRIHSGEKPYE 689

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
332222844	699	PREDICTED: zinc finger protein 782 [Noma	0.863	0.271	0.427	1e-35
395528976	687	PREDICTED: zinc finger protein 184-like	0.895	0.286	0.407	2e-35
301773376	1626	PREDICTED: zinc finger protein 729-like	0.895	0.121	0.422	9e-35
348530662	525	PREDICTED: zinc finger protein 234-like	0.868	0.363	0.388	1e-34
395529478	2642	PREDICTED: uncharacterized protein LOC10	0.895	0.074	0.381	1e-34
189239347	871	PREDICTED: similar to Zinc finger protei	0.895	0.226	0.407	1e-34
392338646	730	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.886	0.267	0.395	1e-34
114625707	699	PREDICTED: zinc finger protein 782 isofo	0.863	0.271	0.416	1e-34
397479849	699	PREDICTED: zinc finger protein 782 [Pan	0.863	0.271	0.416	1e-34
407263762	586	PREDICTED: zinc finger protein 709-like,	0.895	0.336	0.417	1e-34

>gi|332222844|ref|XP_003260579.1| PREDICTED: zinc finger protein 782 [Nomascus leucogenys]

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/192 (42%), Positives = 110/192 (57%), Gaps = 2/192 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           +KC +CG   K    LR+H   HTGE+P+ CH C K+F  + +L  H+ R+H   + ++C
Sbjct: 506 YKCDECGKAFKLKSGLRKHHRTHTGEKPYKCHQCGKAFGQKSQLRGHH-RIHTGEKPYKC 564

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
           NHCG AFS KSNL VH RTHT EK Y CE CG  F Q + L  H+ TH   K +KCN C 
Sbjct: 565 NHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYKCNECG 624

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct: 625 KAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFS 684

Query: 181 VKKHLTQHYKSH 192
            K  L +H K+H
Sbjct: 685 QKSSLREHQKAH 696

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395528976|ref|XP_003766599.1| PREDICTED: zinc finger protein 184-like [Sarcophilus harrisii]

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 106/199 (53%), Gaps = 2/199 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           +KC +CG    +  SL +H  IHTGERP  C  C K+F  RGKL  H +R H  ++  +C
Sbjct: 294 YKCDECGKAFNHRGSLTKHTRIHTGERPFKCSDCGKAFSERGKLKSH-QRTHTGVKPFEC 352

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
           N CG+AFS + NL  H R H   K + C  CG  F++   L +H+ TH  +K F+CN C 
Sbjct: 353 NECGKAFSVRGNLNAHHRIHAGVKPFECNECGKGFSESRLLKSHQITHTGVKPFQCNECG 412

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K +N   NL  H +THT    ++C  CGK F   R+LK H+  H     F C  C   F 
Sbjct: 413 KAFNQKGNLMSHQRTHTGMKPFLCNKCGKTFNQKRFLKSHQKIHTEEKPFECSECGKAFS 472

Query: 181 VKKHLTQHYKSHSMFIPPE 199
            K +L  H K HS   P E
Sbjct: 473 QKGYLKNHKKIHSGEKPFE 491

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301773376|ref|XP_002922125.1| PREDICTED: zinc finger protein 729-like [Ailuropoda melanoleuca]

 Score =  152 bits (384), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 84/199 (42%), Positives = 108/199 (54%), Gaps = 2/199 (1%)

Query: 2    FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
            FKC +CG   +    L +H  IHTGE+P+ C  C K+F     L +H++RVH   R + C
Sbjct: 1266 FKCIECGKAFRLSSKLIQHQRIHTGEKPYRCEECGKAFGQSSSL-IHHQRVHTGERPYGC 1324

Query: 62   NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
              CG+AFS +S L  H RTHT E+ Y C+ CG  F+Q +TL  H+ TH   K FKC+ C 
Sbjct: 1325 RECGKAFSQQSQLVRHQRTHTGERPYQCQECGKAFSQSSTLVGHQRTHATEKPFKCDECG 1384

Query: 121  KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
            K +   S L +H  THT    Y C  C K FG +  L RH+ TH     F CE C  GF 
Sbjct: 1385 KAFRWVSRLSQHQLTHTGEKPYKCNKCAKAFGCSSRLIRHQRTHTGEKPFKCEECGKGFV 1444

Query: 181  VKKHLTQHYKSHSMFIPPE 199
               HL QH + H+   P E
Sbjct: 1445 QGSHLIQHQRIHTGEKPYE 1463

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348530662|ref|XP_003452829.1| PREDICTED: zinc finger protein 234-like [Oreochromis niloticus]

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 2/193 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           + C  CG    N+ + ++H  IHTGE+P+ C +C KSF   G L VH  R H   + + C
Sbjct: 305 YACNTCGKRFTNLSAFKKHAAIHTGEKPYSCKICGKSFTQSGNLTVHM-RTHTGEKWYSC 363

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             CG++FS  SNLTVH+RTHT EK Y+C  CG  F+Q + L  H   H+  K + C  C 
Sbjct: 364 ETCGKSFSRSSNLTVHMRTHTGEKPYLCNACGKSFSQSSALKRHALIHSGEKPYSCKVCG 423

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K +   S+L  H + HT +  +IC+ CG+ F  A   KRH   H     + C++C   F+
Sbjct: 424 KTFCQSSDLTVHSRIHTGDKPHICKSCGRRFSDASAFKRHTAIHTGEKPYSCKLCGNSFR 483

Query: 181 VKKHLTQHYKSHS 193
              HL +H K H+
Sbjct: 484 QSGHLLRHMKIHT 496

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395529478|ref|XP_003766839.1| PREDICTED: uncharacterized protein LOC100916026 [Sarcophilus harrisii]

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 76/199 (38%), Positives = 106/199 (53%), Gaps = 2/199 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           + CP+CG   +    LR+H   H+GERP++C  C ++F     L  H+K VH   + ++C
Sbjct: 414 YACPECGKAFRWSSDLRKHQRSHSGERPYLCGRCGRAFGRSSSLIEHHK-VHTGEKPYEC 472

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             CG+AF   S+L+ H R HT EK Y C  CG  F     L  H+ +H+  K ++C  C 
Sbjct: 473 PECGKAFKGSSDLSQHRRVHTGEKPYECSECGRAFMWKTALVTHRRSHSGEKPYECPQCG 532

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K +   S+L +H +THT   LY C ICGK F  + YL  H+  H     F C VC   F 
Sbjct: 533 KAFVQSSHLTQHRRTHTGEKLYRCSICGKAFSVSSYLIEHQRIHTGEKPFQCSVCGKAFV 592

Query: 181 VKKHLTQHYKSHSMFIPPE 199
            + HLTQH + H+   P E
Sbjct: 593 QRSHLTQHQRIHTGEKPYE 611

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|189239347|ref|XP_973915.2| PREDICTED: similar to Zinc finger protein 43 (Zinc finger protein 39) (Zinc protein HTF6) (Zinc finger protein KOX27) [Tribolium castaneum]

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 113/199 (56%), Gaps = 2/199 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           + C +CG  L + ++   HI IHTGERP VC +C K FR    L  H +  H+ I+   C
Sbjct: 297 YNCKECGKNLHSPYTYVWHIRIHTGERPFVCDLCGKQFRVSQGLVRHLRETHQGIKKFPC 356

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCE 120
           + CGR F+ + N+  H R HT+E+ Y+C+LCG  F Q A+L+ HK +H N   FKC+YC 
Sbjct: 357 DLCGRMFATRRNVEEHRRIHTNERPYVCDLCGKSFKQKASLFVHKRSHKNHFPFKCSYCN 416

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           + +     L  HI  HT    Y C+ICG+ F     LKRHK  H+    +VC VC   F+
Sbjct: 417 QGFRTKPPLLVHITRHTGEKPYKCDICGRCFRIKYELKRHKLIHSDEKPWVCNVCGFSFR 476

Query: 181 VKKHLTQHYKS-HSMFIPP 198
            K++L  H KS H+  + P
Sbjct: 477 QKRYLRNHMKSNHTSAVAP 495

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|392338646|ref|XP_003753590.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 43-like [Rattus norvegicus]

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/197 (39%), Positives = 109/197 (55%), Gaps = 2/197 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           +KC +CG   ++   L  H  IHTGE+P+ C VC K F  R KLN H K++H     ++C
Sbjct: 535 YKCEECGKTFRDSSLLSAHKRIHTGEKPYKCEVCGKDFYYRSKLNKH-KKIHTEKNPYKC 593

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDI-KFKCNYCE 120
             CG+AF ++S L+ H++ HT+EK Y CE+CG  F   + L  HK  H +   +KC  C 
Sbjct: 594 EVCGKAFDNRSRLSNHMKIHTEEKPYKCEVCGKAFHYLSILSKHKIVHTEENPYKCEVCG 653

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K ++ PS L  H K HT    Y CE+CG  F  +  L++HK  H  V  + C+VC  GF 
Sbjct: 654 KAFDYPSRLSNHKKIHTGEKPYKCEVCGNAFCYSSSLRKHKIIHTGVKPYKCKVCGKGFD 713

Query: 181 VKKHLTQHYKSHSMFIP 197
            +  L +H K H    P
Sbjct: 714 YRSRLYKHKKIHRGSKP 730

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|114625707|ref|XP_001153429.1| PREDICTED: zinc finger protein 782 isoform 1 [Pan troglodytes]

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 2/192 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           +KC +CG   K    LR+H   HTGE+P+ C+ C K+F  + +L  H+ R+H   + ++C
Sbjct: 506 YKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHH-RIHTGEKPYKC 564

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
           NHCG AFS KSNL VH RTHT EK Y CE CG  F Q + L  H+ TH   K ++CN C 
Sbjct: 565 NHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECG 624

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct: 625 KAFSEKSVLRKHQRTHTGEKPYNCSQCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFS 684

Query: 181 VKKHLTQHYKSH 192
            K  L +H K+H
Sbjct: 685 QKSSLREHQKAH 696

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397479849|ref|XP_003811216.1| PREDICTED: zinc finger protein 782 [Pan paniscus]

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 2/192 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           +KC +CG   K    LR+H   HTGE+P+ C+ C K+F  + +L  H+ R+H   + ++C
Sbjct: 506 YKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHH-RIHTGEKPYKC 564

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
           NHCG AFS KSNL VH RTHT EK Y CE CG  F Q + L  H+ TH   K ++CN C 
Sbjct: 565 NHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECG 624

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct: 625 KAFSEKSVLRKHQRTHTGEKPYNCSQCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFS 684

Query: 181 VKKHLTQHYKSH 192
            K  L +H K+H
Sbjct: 685 QKSSLREHQKAH 696

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|407263762|ref|XP_003945527.1| PREDICTED: zinc finger protein 709-like, partial [Mus musculus]

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/199 (41%), Positives = 107/199 (53%), Gaps = 2/199 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           ++C QCG     + SL+ H   HTGE+P+ CH C K+F     L  H KR H   + ++C
Sbjct: 237 YECNQCGKAFAQLNSLQCHKRTHTGEKPYECHQCGKAFAQLNSLQRH-KRTHTGEKPYEC 295

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
           N CG+AFS   +L  H RTHT EK Y C  CG  FA  ++L  HK TH   K ++CN C 
Sbjct: 296 NQCGKAFSQYGHLQYHKRTHTGEKPYECNQCGKAFAYLSSLQCHKRTHTGEKPYECNQCG 355

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
           K +   S+LQRH +THT    Y C  CGK F   RYL+ HK TH     + C  C   F 
Sbjct: 356 KAFARHSHLQRHKRTHTGEKPYECHQCGKAFAQYRYLQYHKRTHTGEKPYECNQCGKSFS 415

Query: 181 VKKHLTQHYKSHSMFIPPE 199
              HL  H ++H+   P E
Sbjct: 416 QYSHLQHHERTHTGKKPYE 434

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
UNIPROTKB|G3V1K9	567	ZNF782 "Zinc finger protein 78	0.863	0.335	0.416	3.6e-41
UNIPROTKB|F1MYX1	598	ZNF782 "Uncharacterized protei	0.886	0.326	0.406	4.6e-41
UNIPROTKB|H0Y892	688	ZNF782 "Zinc finger protein 78	0.863	0.276	0.416	1e-40
UNIPROTKB|Q6ZMW2	699	ZNF782 "Zinc finger protein 78	0.863	0.271	0.416	1.2e-40
UNIPROTKB|J9NUM4	720	ZNF782 "Uncharacterized protei	0.868	0.265	0.409	4.9e-40
UNIPROTKB|G3MYG2	666	ZNF782 "Uncharacterized protei	0.868	0.286	0.409	5e-40
UNIPROTKB|Q03923	595	ZNF85 "Zinc finger protein 85"	0.863	0.319	0.412	5.3e-40
UNIPROTKB|Q49A12	536	ZNF85 "Zinc finger protein 85"	0.863	0.354	0.412	5.3e-40
UNIPROTKB|F1PUQ8	512	F1PUQ8 "Uncharacterized protei	0.904	0.388	0.396	1.4e-39
ZFIN|ZDB-GENE-050208-786	303	si:dkey-1b17.11 "si:dkey-1b17.	0.895	0.650	0.386	2.9e-39

UNIPROTKB|G3V1K9 ZNF782 "Zinc finger protein 782" [Homo sapiens (taxid:9606)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 80/192 (41%), Positives = 110/192 (57%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             +KC +CG   K    LR+H   HTGE+P+ C+ C K+F  + +L  H+ R+H   + ++C
Sbjct:   374 YKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHH-RIHTGEKPYKC 432

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             NHCG AFS KSNL VH RTHT EK Y CE CG  F Q + L  H+ TH   K ++CN C 
Sbjct:   433 NHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECG 492

Query:   121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
             K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct:   493 KAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFS 552

Query:   181 VKKHLTQHYKSH 192
              K  L +H K+H
Sbjct:   553 QKSSLREHQKAH 564

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MYX1 ZNF782 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 80/197 (40%), Positives = 111/197 (56%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             +KC +CG   K    LR+H   HTGE+P+ C+ C K+F  + +L  H+ R+H   + + C
Sbjct:   402 YKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCEKAFGQKSQLRGHH-RIHTGEKPYTC 460

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             NHCG AFS KSNL VH RTHT EK Y C+ CG  F Q + L  H+ TH   K + CN C 
Sbjct:   461 NHCGEAFSQKSNLRVHHRTHTGEKPYKCDECGKTFRQKSNLRGHQRTHTGEKPYGCNECA 520

Query:   121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
             K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct:   521 KSFSEKSVLRKHQRTHTGEKPYNCNHCGEAFSQKSNLRVHQRTHTGEKPYKCDTCGKTFS 580

Query:   181 VKKHLTQHYKSHSMFIP 197
              K  L +H K+H+ + P
Sbjct:   581 QKSSLREHQKAHTEYSP 597

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|H0Y892 ZNF782 "Zinc finger protein 782" [Homo sapiens (taxid:9606)]

 Score = 437 (158.9 bits), Expect = 1.0e-40, P = 1.0e-40
 Identities = 80/192 (41%), Positives = 110/192 (57%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             +KC +CG   K    LR+H   HTGE+P+ C+ C K+F  + +L  H+ R+H   + ++C
Sbjct:   495 YKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHH-RIHTGEKPYKC 553

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             NHCG AFS KSNL VH RTHT EK Y CE CG  F Q + L  H+ TH   K ++CN C 
Sbjct:   554 NHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECG 613

Query:   121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
             K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct:   614 KAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFS 673

Query:   181 VKKHLTQHYKSH 192
              K  L +H K+H
Sbjct:   674 QKSSLREHQKAH 685

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q6ZMW2 ZNF782 "Zinc finger protein 782" [Homo sapiens (taxid:9606)]

 Score = 437 (158.9 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 80/192 (41%), Positives = 110/192 (57%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             +KC +CG   K    LR+H   HTGE+P+ C+ C K+F  + +L  H+ R+H   + ++C
Sbjct:   506 YKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHH-RIHTGEKPYKC 564

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             NHCG AFS KSNL VH RTHT EK Y CE CG  F Q + L  H+ TH   K ++CN C 
Sbjct:   565 NHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECG 624

Query:   121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
             K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct:   625 KAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGRTFS 684

Query:   181 VKKHLTQHYKSH 192
              K  L +H K+H
Sbjct:   685 QKSSLREHQKAH 696

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|J9NUM4 ZNF782 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 432 (157.1 bits), Expect = 4.9e-40, P = 4.9e-40
 Identities = 79/193 (40%), Positives = 111/193 (57%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             +KC +CG   K    LR+H   HTGE+P+ C+ C K+F  + +L  H+ R+H   + ++C
Sbjct:   527 YKCDECGKSFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHH-RIHTGEKPYKC 585

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             NHCG AFS KSNL VH RTHT EK Y C+ CG  F Q + L  H+ TH   K ++CN C 
Sbjct:   586 NHCGEAFSQKSNLRVHHRTHTGEKPYKCDDCGKTFRQKSNLRGHQRTHTGEKPYECNECG 645

Query:   121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
             K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct:   646 KAFSEKSVLRKHQRTHTGEKPYKCNHCGEAFSQKSNLRVHQRTHTGEKPYKCDKCGKTFS 705

Query:   181 VKKHLTQHYKSHS 193
              K  L +H K+H+
Sbjct:   706 QKSSLREHQKAHT 718

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3MYG2 ZNF782 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 430 (156.4 bits), Expect = 5.0e-40, P = 5.0e-40
 Identities = 79/193 (40%), Positives = 109/193 (56%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             +KC +CG   K    LR+H   HTGE+P+ C+ C K+F  + +L  H+ R+H   + + C
Sbjct:   473 YKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCEKAFGQKSQLRGHH-RIHTGEKPYTC 531

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             NHCG AFS KSNL VH RTHT EK Y C+ CG  F Q + L  H+ TH   K + CN C 
Sbjct:   532 NHCGEAFSQKSNLRVHHRTHTGEKPYKCDECGKTFRQKSNLRGHQRTHTGEKPYGCNECA 591

Query:   121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
             K ++  S L++H +THT    Y C  CG+ F     L+ H+ TH     + C+ C   F 
Sbjct:   592 KSFSEKSVLRKHQRTHTGEKPYNCNHCGEAFSQKSNLRVHQRTHTGEKPYKCDTCGKTFS 651

Query:   181 VKKHLTQHYKSHS 193
              K  L +H K+H+
Sbjct:   652 QKSSLREHQKAHT 664

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q03923 ZNF85 "Zinc finger protein 85" [Homo sapiens (taxid:9606)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 80/194 (41%), Positives = 110/194 (56%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             +KC +CG   K+  +L +H +IHTGE+P+ C  C K+F    KL  H K++H   + ++C
Sbjct:   398 YKCKECGKAFKHSSTLTKHKIIHTGEKPYKCKECEKAFNQSSKLTEH-KKIHTGEKPYEC 456

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQW-ATLYNHKFTHNDIK-FKCNYC 119
               CG+AF+  SNLT H ++HT+EK Y CE CG  F +W +TL  HK  H   K +KC  C
Sbjct:   457 EKCGKAFNQSSNLTRHKKSHTEEKPYKCEECGKGF-KWPSTLTIHKIIHTGEKPYKCEEC 515

Query:   120 EKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGF 179
              K +N  S L +H K HT    Y CE CGK F  +  L +HK  H     + CE C+  F
Sbjct:   516 GKAFNQSSKLTKHKKIHTGEKPYTCEECGKAFNQSSNLTKHKRIHTGEKPYKCEECDKAF 575

Query:   180 KVKKHLTQHYKSHS 193
             K    LT+H   H+
Sbjct:   576 KWSSVLTKHKIIHT 589

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0003714 "transcription corepressor activity" evidence=TAS

UNIPROTKB|Q49A12 ZNF85 "Zinc finger protein 85" [Homo sapiens (taxid:9606)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 80/194 (41%), Positives = 110/194 (56%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             +KC +CG   K+  +L +H +IHTGE+P+ C  C K+F    KL  H K++H   + ++C
Sbjct:   339 YKCKECGKAFKHSSTLTKHKIIHTGEKPYKCKECEKAFNQSSKLTEH-KKIHTGEKPYEC 397

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQW-ATLYNHKFTHNDIK-FKCNYC 119
               CG+AF+  SNLT H ++HT+EK Y CE CG  F +W +TL  HK  H   K +KC  C
Sbjct:   398 EKCGKAFNQSSNLTRHKKSHTEEKPYKCEECGKGF-KWPSTLTIHKIIHTGEKPYKCEEC 456

Query:   120 EKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGF 179
              K +N  S L +H K HT    Y CE CGK F  +  L +HK  H     + CE C+  F
Sbjct:   457 GKAFNQSSKLTKHKKIHTGEKPYTCEECGKAFNQSSNLTKHKRIHTGEKPYKCEECDKAF 516

Query:   180 KVKKHLTQHYKSHS 193
             K    LT+H   H+
Sbjct:   517 KWSSVLTKHKIIHT 530

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PUQ8 F1PUQ8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 80/202 (39%), Positives = 106/202 (52%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             FKC +CG        L EH  IHTGE+PH C  C K FR+      HY R+H   R ++C
Sbjct:   205 FKCKECGKTFNQTLHLIEHERIHTGEKPHRCDECGKHFRHSSYFLTHY-RIHTGERPYKC 263

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
               CG+AF+  S L  H RTHT EK + CE CG  F Q   L  H+  H   K ++C+ CE
Sbjct:   264 KECGKAFNSSSTLRSHHRTHTGEKPFRCEECGKTFKQSTKLTRHRRVHTGEKPYQCSECE 323

Query:   121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
             K +   S+L  H + HT    Y C++CGK F    +L  H+  H    ++ CE C   F+
Sbjct:   324 KSFGRSSSLTEHKRIHTGEKPYHCKVCGKAFRCNSHLSEHQRIHQEEKSYRCEQCGKYFR 383

Query:   181 VKKHLTQHYKSHSMFIPPEQFP 202
                HL++H + H    PPEQ P
Sbjct:   384 NGSHLSEHRRVHQRG-PPEQCP 404

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-050208-786 si:dkey-1b17.11 "si:dkey-1b17.11" [Danio rerio (taxid:7955)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 77/199 (38%), Positives = 108/199 (54%)

Query:     2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
             F C QCG  L +++ LR H+MIHTGE+P+ C  C KSF   G L  H   +H   +TH C
Sbjct:    96 FTCTQCGRTLASMFDLRHHMMIHTGEKPYKCSHCDKSFNRLGTLKTHML-LHTGEKTHTC 154

Query:    62 NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
               CG++F    +L  H+R HT+ K Y C  CG  F+  + L  H+  H+ ++ F C  CE
Sbjct:   155 EQCGKSFLRAGDLKKHLRVHTERKPYSCSECGRRFSMQSNLTAHQKIHSGVREFVCCECE 214

Query:   121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK 180
             K +    +L+RH ++HT+   Y C  C K F  + +LK H   H     F+C  C  GFK
Sbjct:   215 KTFITAVDLRRHQRSHTEEKPYKCLHCDKTFRYSGHLKVHLIIHTGERPFICTQCGNGFK 274

Query:   181 VKKHLTQHYKSHSMFIPPE 199
                HL +H K H+ F+  E
Sbjct:   275 RSTHLNRHMKIHTPFVSHE 293

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	220
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.003

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 33.5 bits (77), Expect = 0.003
 Identities = 14/26 (53%), Positives = 19/26 (73%)

Query: 16 SLREHIMIHTGERPHVCHVCSKSFRN 41
          +LR H+  HTGE+P+ C VC KSF +
Sbjct: 1  NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	220
KOG2462|consensus	279		99.97
KOG1074|consensus	958		99.97
KOG2462|consensus	279		99.95
KOG3608|consensus	467		99.92
KOG3623|consensus	1007		99.9
KOG3608|consensus	467		99.89
KOG3623|consensus	1007		99.85
KOG1074|consensus	958		99.81
KOG3576|consensus	267		99.7
KOG3576|consensus	267		99.7
PLN03086	567	PRLI-interacting factor K; Provisional	99.47
PLN03086	567	PRLI-interacting factor K; Provisional	99.39
PHA00733	128	hypothetical protein	99.19
PHA00733	128	hypothetical protein	99.19
PHA02768	55	hypothetical protein; Provisional	99.04
KOG3993|consensus	500		99.0
KOG3993|consensus	500		98.95
PHA02768	55	hypothetical protein; Provisional	98.91
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.77
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.72
PHA00616	44	hypothetical protein	98.72
PHA00616	44	hypothetical protein	98.58
PHA00732	79	hypothetical protein	98.47
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.36
PHA00732	79	hypothetical protein	98.29
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.19
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.02
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.97
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.95
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.92
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.79
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.77
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.69
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.61
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.58
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.42
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.33
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.31
smart00355	26	ZnF_C2H2 zinc finger.	97.29
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.22
PRK04860	160	hypothetical protein; Provisional	97.06
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.99
smart00355	26	ZnF_C2H2 zinc finger.	96.94
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.75
KOG2785|consensus	390		96.74
KOG1146|consensus	1406		96.63
PRK04860	160	hypothetical protein; Provisional	96.54
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.53
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.44
KOG2231|consensus	669		95.9
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.47
KOG2482|consensus	423		95.36
KOG2785|consensus	390		95.33
KOG2893|consensus	341		95.1
KOG1146|consensus	1406		94.96
KOG4173|consensus	253		94.56
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.43
KOG2231|consensus	669		94.38
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.19
KOG2482|consensus	423		94.05
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	94.03
KOG2893|consensus	341		93.94
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.92
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	93.6
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.44
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.39
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.32
COG5048	467	FOG: Zn-finger [General function prediction only]	92.92
COG5048	467	FOG: Zn-finger [General function prediction only]	92.9
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.57
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	91.76
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	90.74
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	90.29
COG4049	65	Uncharacterized protein containing archaeal-type C	90.21
PHA00626	59	hypothetical protein	89.02
COG4049	65	Uncharacterized protein containing archaeal-type C	88.23
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	87.71
KOG4173|consensus	253		87.67
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	87.59
COG1592	166	Rubrerythrin [Energy production and conversion]	86.43
COG1592	166	Rubrerythrin [Energy production and conversion]	86.42
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	85.85
PF05290	140	Baculo_IE-1: Baculovirus immediate-early protein (	85.61
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	85.48
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	85.18
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	84.52
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	83.26
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	82.76
KOG2186|consensus	276		82.08
KOG2186|consensus	276		81.71
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	81.15
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	80.83

>KOG2462|consensus

Probab=99.97  E-value=4.3e-32  Score=195.29  Aligned_cols=134  Identities=34%  Similarity=0.706  Sum_probs=126.1

Q ss_pred             cccccccccccCChhHHHHHHhhcCC---CCcccCchhhhhcCCHHHHHhHHHHhCCcceecCcCccccCChhhHHHHHh
Q psy11591         58 THQCNHCGRAFSDKSNLTVHIRTHTD---EKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIK  134 (220)
Q Consensus        58 ~~~C~~C~~~~~~~~~l~~h~~~~~~---~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  134 (220)
                      .|.|++|++.+.+.++|..|.+.|-.   .+.+.|..||+++.+...|+.|+++|. .+..|.+||+.|...+.|+.|+|
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGHiR  208 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGHIR  208 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhcccc
Confidence            48999999999999999999988754   577999999999999999999999996 67899999999999999999999


Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhc
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      +|+|||||.|+.|+++|...++|+.|+++|.+.++|+|..|+|+|...+.|.+|.+.-
T Consensus       209 THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  209 THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence            9999999999999999999999999999999999999999999999999999998763

>KOG1074|consensus

Probab=99.97  E-value=1.7e-31  Score=216.21  Aligned_cols=141  Identities=34%  Similarity=0.731  Sum_probs=130.2

Q ss_pred             ccccccccccCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHHHHhCC-----cceecC---cCccccCChhhHH
Q psy11591         59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHND-----IKFKCN---YCEKVYNNPSNLQ  130 (220)
Q Consensus        59 ~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~-----~~~~C~---~C~~~f~~~~~l~  130 (220)
                      .+|-.|.+++.-.+.|+.|.++|+|++||+|.+||++|..+.+|+.|+..|..     .++.|+   +|-+.|.+...|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            47999999999999999999999999999999999999999999999999943     348899   9999999999999


Q ss_pred             HHHhhhcC------------------------------------------------------------------------
Q psy11591        131 RHIKTHTD------------------------------------------------------------------------  138 (220)
Q Consensus       131 ~H~~~h~~------------------------------------------------------------------------  138 (220)
                      +|+++|.+                                                                        
T Consensus       686 QhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~  765 (958)
T KOG1074|consen  686 QHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGR  765 (958)
T ss_pred             ceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccccc
Confidence            99999873                                                                        


Q ss_pred             --------------------------------------------------------------------------------
Q psy11591        139 --------------------------------------------------------------------------------  138 (220)
Q Consensus       139 --------------------------------------------------------------------------------  138 (220)
                                                                                                      
T Consensus       766 ~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~  845 (958)
T KOG1074|consen  766 ELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKT  845 (958)
T ss_pred             ccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------------CCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHH
Q psy11591        139 -------------------------------NSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQ  187 (220)
Q Consensus       139 -------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  187 (220)
                                                     .....|.+||+.|..++.|..|+++|++++||.|.+|++.|.....|..
T Consensus       846 n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKv  925 (958)
T KOG1074|consen  846 NEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKV  925 (958)
T ss_pred             ccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhh
Confidence                                           1116799999999999999999999999999999999999999999999


Q ss_pred             HhhhcccccCCC
Q psy11591        188 HYKSHSMFIPPE  199 (220)
Q Consensus       188 H~~~h~~~~~~~  199 (220)
                      ||.+|....|+.
T Consensus       926 HMgtH~w~q~~s  937 (958)
T KOG1074|consen  926 HMGTHMWVQPPS  937 (958)
T ss_pred             hhccccccCCCc
Confidence            999999888775

>KOG2462|consensus

Probab=99.95  E-value=8.2e-29  Score=178.42  Aligned_cols=133  Identities=33%  Similarity=0.678  Sum_probs=122.8

Q ss_pred             CCcccccchhhcCChhHHHHHHhhhcC---CCCcccccccccccCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHh
Q psy11591         28 RPHVCHVCSKSFRNRGKLNVHYKRVHE---RIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYN  104 (220)
Q Consensus        28 ~~~~C~~C~~~~~~~~~l~~H~~~~h~---~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~  104 (220)
                      ..|+|+.|++.+.+.+.|.+|. +.|-   ..+.+.|++|++.+.+...|..|+++|.  .+..|.+||+.|...+.|+.
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHk-Q~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHK-QTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             Cceeccccccccccccccchhh-cccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            4489999999999999999996 5553   3567999999999999999999999986  68999999999999999999


Q ss_pred             HHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHH
Q psy11591        105 HKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       105 h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      |+++| +++||.|+.|+++|.++++|+.|+++|.+.+.|.|+.|+|.|+..+.|.+|...
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999 899999999999999999999999999999999999999999999999999864

>KOG3608|consensus

Probab=99.92  E-value=2.3e-25  Score=165.15  Aligned_cols=190  Identities=28%  Similarity=0.554  Sum_probs=169.8

Q ss_pred             CCccchhhhcCHHHHHHHHHHhhCCCCcccccchhhcCChhHHHHHHhhh-cCCCCcccccccccccCChhHHHHHHhhc
Q psy11591          3 KCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRV-HERIRTHQCNHCGRAFSDKSNLTVHIRTH   81 (220)
Q Consensus         3 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~-h~~~~~~~C~~C~~~~~~~~~l~~h~~~~   81 (220)
                      .+..|...+.++..|+.|++.|++++...|+.||..|.+...|..|.++- -....+|+|..|.+.|.+...|..|+..|
T Consensus       181 ~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rH  260 (467)
T KOG3608|consen  181 NWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRH  260 (467)
T ss_pred             cchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHh
Confidence            34678899999999999999999999999999999999999999998543 33556899999999999999999999887


Q ss_pred             CCCCcccCchhhhhcCCHHHHHhHHHHh--CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCc--cccccCCHHHH
Q psy11591         82 TDEKKYMCELCGAEFAQWATLYNHKFTH--NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYL  157 (220)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l  157 (220)
                      .  .-|+|+.|+.+....+.|..|++..  ..+||+|..|++.+.+.+.|.+|...|. +..|.|..  |..+|.+...+
T Consensus       261 v--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~  337 (467)
T KOG3608|consen  261 V--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQM  337 (467)
T ss_pred             h--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHH
Confidence            4  4599999999999999999999876  6899999999999999999999999887 78899988  99999999999


Q ss_pred             HHHHHHcC-CCC--cccccccccccCchhHHHHHhhhcccc
Q psy11591        158 KRHKDTHN-SVN--TFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       158 ~~H~~~h~-~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ++|.+.++ |.+  +|.|-.|++.|.+..+|.+|+..-++.
T Consensus       338 ~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  338 RRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             HHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcc
Confidence            99987655 654  599999999999999999998554443

>KOG3623|consensus

Probab=99.90  E-value=2.3e-24  Score=172.91  Aligned_cols=106  Identities=33%  Similarity=0.652  Sum_probs=90.4

Q ss_pred             CCCccchhhhcCHHHHHHHHHH-h-hCCCCcccccchhhcCChhHHHHHHhhhcCC------------CCcccccccccc
Q psy11591          2 FKCPQCGALLKNIWSLREHIMI-H-TGERPHVCHVCSKSFRNRGKLNVHYKRVHER------------IRTHQCNHCGRA   67 (220)
Q Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~-~-~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~------------~~~~~C~~C~~~   67 (220)
                      ..|++|++.+.+...|..|+.. | ..+..|.|..|..+|..+..|..||..+-.+            .+.|+|.+|++.
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            5799999999999999999874 3 3345589999999999999999998543222            245999999999


Q ss_pred             cCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHHH
Q psy11591         68 FSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKF  107 (220)
Q Consensus        68 ~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~  107 (220)
                      |..+-.|..|+++|.|++||.|+.|++.|.....+..|+.
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            9999999999999999999999999999998888888853

>KOG3608|consensus

Probab=99.89  E-value=1.2e-22  Score=150.80  Aligned_cols=187  Identities=26%  Similarity=0.565  Sum_probs=165.7

Q ss_pred             CccchhhhcCHHHHHHHHHHhhCC------------CC-ccc--ccchhhcCChhHHHHHHhhhcCCCCccccccccccc
Q psy11591          4 CPQCGALLKNIWSLREHIMIHTGE------------RP-HVC--HVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAF   68 (220)
Q Consensus         4 C~~C~~~f~~~~~l~~H~~~~~~~------------~~-~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~   68 (220)
                      +..|++.|.+...+..|+..|.--            +| +.|  ..|-+.+.++..|+.|. +.|++++-.-|+.|+.-|
T Consensus       139 WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~-r~Hs~eKvvACp~Cg~~F  217 (467)
T KOG3608|consen  139 WEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHI-RTHSNEKVVACPHCGELF  217 (467)
T ss_pred             hhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHH-HhcCCCeEEecchHHHHh
Confidence            367999999999999998776432            12 334  45899999999999997 899999999999999999


Q ss_pred             CChhHHHHHHhhcC--CCCcccCchhhhhcCCHHHHHhHHHHhCCcceecCcCccccCChhhHHHHHhh-hcCCCceeCC
Q psy11591         69 SDKSNLTVHIRTHT--DEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKT-HTDNSLYICE  145 (220)
Q Consensus        69 ~~~~~l~~h~~~~~--~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~  145 (220)
                      .+...|..|++..+  ...+|.|..|.+.|..+..|..|+..|- .-|.|+.|+-.....++|..|++. |...+||+|+
T Consensus       218 ~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv-n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd  296 (467)
T KOG3608|consen  218 RTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV-NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCD  296 (467)
T ss_pred             ccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh-hcccccccccCCCChHHHHHHHHhhhccCCCcccc
Confidence            99999999987654  4678999999999999999999998883 358999999999999999999995 6789999999


Q ss_pred             ccccccCCHHHHHHHHHHcCCCCcccccc--cccccCchhHHHHHhhhcc
Q psy11591        146 ICGKDFGTARYLKRHKDTHNSVNTFVCEV--CNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       146 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  193 (220)
                      .|++.+...+.|.+|...|. +-.|+|..  |.++|.++.+|++|++.++
T Consensus       297 ~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  297 ECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             chhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhc
Confidence            99999999999999999888 67899987  9999999999999987766

>KOG3623|consensus

Probab=99.85  E-value=8.2e-22  Score=158.39  Aligned_cols=77  Identities=26%  Similarity=0.608  Sum_probs=70.5

Q ss_pred             CCCccchhhhcCHHHHHHHHHHhhCC-------------CCcccccchhhcCChhHHHHHHhhhcCCCCccccccccccc
Q psy11591          2 FKCPQCGALLKNIWSLREHIMIHTGE-------------RPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAF   68 (220)
Q Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~~~~~-------------~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~   68 (220)
                      |.|..|...|..+..|.+|+..|...             +.|+|..|++.|..+-.|..|+ +.|.|++||.|+.|++.|
T Consensus       241 fsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHl-RIHSGEKPfeCpnCkKRF  319 (1007)
T KOG3623|consen  241 FSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHL-RIHSGEKPFECPNCKKRF  319 (1007)
T ss_pred             CcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhh-eeecCCCCcCCccccccc
Confidence            67999999999999999999988643             4599999999999999999997 899999999999999999


Q ss_pred             CChhHHHHHHh
Q psy11591         69 SDKSNLTVHIR   79 (220)
Q Consensus        69 ~~~~~l~~h~~   79 (220)
                      ...+++..|+.
T Consensus       320 SHSGSySSHmS  330 (1007)
T KOG3623|consen  320 SHSGSYSSHMS  330 (1007)
T ss_pred             ccCCccccccc
Confidence            99988888864

>KOG1074|consensus

Probab=99.81  E-value=1e-20  Score=154.23  Aligned_cols=170  Identities=29%  Similarity=0.545  Sum_probs=142.5

Q ss_pred             CCCCccchhhhcCHHHHHHHHHHhhCCCCcccccchhhcCChhHHHHHHhhhcCCC----Cccccc---ccccccCChhH
Q psy11591          1 MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERI----RTHQCN---HCGRAFSDKSN   73 (220)
Q Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~----~~~~C~---~C~~~~~~~~~   73 (220)
                      |-+|-.|-+.......|+.|.+.|++++||+|.+||+.|.++++|+.|| ..|...    ..+.|+   +|.+.|.+.-.
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcc-cccccCccccccccCCchhhhccccccccc
Confidence            3468899999999999999999999999999999999999999999998 666543    458899   99999999999


Q ss_pred             HHHHHhhcCCC-C------------cccCchhhhhcCCHHHHHhHHHHhC-Cc---------------------------
Q psy11591         74 LTVHIRTHTDE-K------------KYMCELCGAEFAQWATLYNHKFTHN-DI---------------------------  112 (220)
Q Consensus        74 l~~h~~~~~~~-~------------~~~C~~C~~~f~~~~~l~~h~~~~~-~~---------------------------  112 (220)
                      +..|++.|.+. .            .-+|..|.+.|.+...+..++..+. ..                           
T Consensus       684 lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~  763 (958)
T KOG1074|consen  684 LPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSC  763 (958)
T ss_pred             ccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccccc
Confidence            99999998732 1            1356667777755555555443330 00                           


Q ss_pred             --------------------------------------------------------------------------------
Q psy11591        113 --------------------------------------------------------------------------------  112 (220)
Q Consensus       113 --------------------------------------------------------------------------------  112 (220)
                                                                                                      
T Consensus       764 ~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t  843 (958)
T KOG1074|consen  764 GRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLAT  843 (958)
T ss_pred             ccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------------------ceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHH
Q psy11591        113 -----------------------------------KFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYL  157 (220)
Q Consensus       113 -----------------------------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  157 (220)
                                                         ...|..||+.|.+.+.|..|+++|++++||.|.+|+++|....+|
T Consensus       844 ~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnL  923 (958)
T KOG1074|consen  844 KTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNL  923 (958)
T ss_pred             ccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhh
Confidence                                               145999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCccc
Q psy11591        158 KRHKDTHNSVNTFV  171 (220)
Q Consensus       158 ~~H~~~h~~~~~~~  171 (220)
                      +.|+.+|.+..++.
T Consensus       924 KvHMgtH~w~q~~s  937 (958)
T KOG1074|consen  924 KVHMGTHMWVQPPS  937 (958)
T ss_pred             hhhhccccccCCCc
Confidence            99999999887653

>KOG3576|consensus

Probab=99.70  E-value=1.1e-17  Score=115.66  Aligned_cols=125  Identities=30%  Similarity=0.608  Sum_probs=90.3

Q ss_pred             CCCcccccchhhcCChhHHHHHHhhhcCCCCcccccccccccCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHH
Q psy11591         27 ERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHK  106 (220)
Q Consensus        27 ~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~  106 (220)
                      ...+.|..|++.|.....|..|+ ..|...+.+.|..||++|.+...|..|.++|+|.+||+|+.|+++|..+-.|..|+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~-kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHL-KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHh-hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            34588999999999999999997 78888888999999999999999999999999999999999999999998888887


Q ss_pred             HHhCCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        107 FTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       107 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      +.-...+.           ...++     ....+.|.|..||..-.....+..|++.|+...
T Consensus       194 ~kvhgv~~-----------~yayk-----err~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  194 KKVHGVQH-----------QYAYK-----ERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHcCchH-----------HHHHH-----HhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            53311110           00000     123344555555555555555555555555443

>KOG3576|consensus

Probab=99.70  E-value=5.9e-18  Score=116.95  Aligned_cols=115  Identities=30%  Similarity=0.591  Sum_probs=102.8

Q ss_pred             CCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHH
Q psy11591         83 DEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHK  161 (220)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  161 (220)
                      +...|.|.+|++.|....-|..|+.-| .-+.+-|..||+.|.+.-.|.+|+++|+|-+||+|..|+++|...-.|..|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            345589999999999999999999998 4567899999999999999999999999999999999999999999999998


Q ss_pred             HHcCC-----------CCcccccccccccCchhHHHHHhhhcccccC
Q psy11591        162 DTHNS-----------VNTFVCEVCNTGFKVKKHLTQHYKSHSMFIP  197 (220)
Q Consensus       162 ~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  197 (220)
                      +..+|           ++.|.|..||++-........|++.|+...|
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            76665           3569999999999999999999999886543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.47  E-value=1.6e-13  Score=111.08  Aligned_cols=145  Identities=20%  Similarity=0.411  Sum_probs=113.4

Q ss_pred             cccccchhhcCChhHHHHHHhhhcCCCCcccccc--cccccCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHHH
Q psy11591         30 HVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKF  107 (220)
Q Consensus        30 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~  107 (220)
                      ..|+.|.... ....|..|.  .+-......|+.  |+..|.. ..+..|         +.|+.|++.|. ...+..|+.
T Consensus       408 V~C~NC~~~i-~l~~l~lHe--~~C~r~~V~Cp~~~Cg~v~~r-~el~~H---------~~C~~Cgk~f~-~s~LekH~~  473 (567)
T PLN03086        408 VECRNCKHYI-PSRSIALHE--AYCSRHNVVCPHDGCGIVLRV-EEAKNH---------VHCEKCGQAFQ-QGEMEKHMK  473 (567)
T ss_pred             EECCCCCCcc-chhHHHHHH--hhCCCcceeCCcccccceeec-cccccC---------ccCCCCCCccc-hHHHHHHHH
Confidence            5698888854 456677885  334445677885  9888743 333333         58999999996 677899999


Q ss_pred             HhCCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccC----------CHHHHHHHHHHcCCCCccccccccc
Q psy11591        108 THNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFG----------TARYLKRHKDTHNSVNTFVCEVCNT  177 (220)
Q Consensus       108 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~C~~C~~  177 (220)
                      .+ ..++.|+ |+..+ ....|..|+..|.+++++.|++|++.+.          ..+.|..|..++ |.+++.|..||+
T Consensus       474 ~~-Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk  549 (567)
T PLN03086        474 VF-HEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGR  549 (567)
T ss_pred             hc-CCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCC
Confidence            87 4889999 99765 5689999999999999999999999985          246899999885 889999999999


Q ss_pred             ccCchhHHHHHhhhcc
Q psy11591        178 GFKVKKHLTQHYKSHS  193 (220)
Q Consensus       178 ~f~~~~~l~~H~~~h~  193 (220)
                      .+ ...+|..|+...|
T Consensus       550 ~V-rlrdm~~H~~~~h  564 (567)
T PLN03086        550 SV-MLKEMDIHQIAVH  564 (567)
T ss_pred             ee-eehhHHHHHHHhh
Confidence            87 5667888876544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.39  E-value=1.4e-12  Score=105.80  Aligned_cols=144  Identities=17%  Similarity=0.438  Sum_probs=111.8

Q ss_pred             CCccchhhhcCHHHHHHHHHHhhCCCCccccc--chhhcCChhHHHHHHhhhcCCCCcccccccccccCChhHHHHHHhh
Q psy11591          3 KCPQCGALLKNIWSLREHIMIHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRT   80 (220)
Q Consensus         3 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~   80 (220)
                      .|+.|.+..+. ..|..|...... ....|+.  |+..|. ...+..          .+.|+.|++.|. ...+..|+..
T Consensus       409 ~C~NC~~~i~l-~~l~lHe~~C~r-~~V~Cp~~~Cg~v~~-r~el~~----------H~~C~~Cgk~f~-~s~LekH~~~  474 (567)
T PLN03086        409 ECRNCKHYIPS-RSIALHEAYCSR-HNVVCPHDGCGIVLR-VEEAKN----------HVHCEKCGQAFQ-QGEMEKHMKV  474 (567)
T ss_pred             ECCCCCCccch-hHHHHHHhhCCC-cceeCCcccccceee-cccccc----------CccCCCCCCccc-hHHHHHHHHh
Confidence            48888887544 567788865433 4467985  999873 232333          368999999996 5789999999


Q ss_pred             cCCCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccC----------ChhhHHHHHhhhcCCCceeCCcccc
Q psy11591         81 HTDEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYN----------NPSNLQRHIKTHTDNSLYICEICGK  149 (220)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~C~~C~~  149 (220)
                      ++  .++.|+ ||..+ .+..|..|+..+ ..+++.|+.|++.+.          ..+.|..|... .|.+++.|..||+
T Consensus       475 ~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~-CG~rt~~C~~Cgk  549 (567)
T PLN03086        475 FH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI-CGSRTAPCDSCGR  549 (567)
T ss_pred             cC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh-cCCcceEccccCC
Confidence            75  889999 99755 678999999888 789999999999985          24589999888 4999999999999


Q ss_pred             ccCCHHHHHHHHHHcCC
Q psy11591        150 DFGTARYLKRHKDTHNS  166 (220)
Q Consensus       150 ~f~~~~~l~~H~~~h~~  166 (220)
                      .+... .+..|+...|.
T Consensus       550 ~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        550 SVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             eeeeh-hHHHHHHHhhc
Confidence            98776 56788765543

>PHA00733 hypothetical protein

Probab=99.19  E-value=4.5e-11  Score=79.70  Aligned_cols=55  Identities=25%  Similarity=0.464  Sum_probs=36.9

Q ss_pred             CCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhccc
Q psy11591        138 DNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       138 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      +.+||.|+.|++.|.+.+.|..|++.+  ..+|.|..|++.|.....|..|+...|+
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            356677777777777777777776654  2356777777777777777777665554

>PHA00733 hypothetical protein

Probab=99.19  E-value=2.5e-11  Score=80.92  Aligned_cols=93  Identities=15%  Similarity=0.289  Sum_probs=74.3

Q ss_pred             hHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhH--H----HHhCCcceecCcCccccCChhhHHHHHhhhcCCCceeCC
Q psy11591         72 SNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNH--K----FTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICE  145 (220)
Q Consensus        72 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h--~----~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  145 (220)
                      .+|..+-..-...+++.|.+|+..|.....+..+  +    ..++..||.|+.|++.|.+...|..|++.+  +.+|.|+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            3444433333346779999999998887777666  2    233678999999999999999999999976  3579999


Q ss_pred             ccccccCCHHHHHHHHHHcCC
Q psy11591        146 ICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       146 ~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      .|++.|.....|..|+...|+
T Consensus       104 ~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        104 VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCHHHHHHHHHHhcC
Confidence            999999999999999988775

>PHA02768 hypothetical protein; Provisional

Probab=99.04  E-value=1.2e-10  Score=64.23  Aligned_cols=43  Identities=21%  Similarity=0.372  Sum_probs=32.2

Q ss_pred             eeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHH
Q psy11591        142 YICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLT  186 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  186 (220)
                      |.|+.||+.|+..+.|..|+++|+  ++|.|..|++.|...+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            677778888888888888887777  5777777877777665554

>KOG3993|consensus

Probab=99.00  E-value=2.1e-11  Score=93.51  Aligned_cols=193  Identities=17%  Similarity=0.229  Sum_probs=115.6

Q ss_pred             CCCccchhhhcCHHHHHHHHHHhhCCCCcccccchhhcCChhHHHHHHhhhcCCCCcccc---cccccccCChhHHHHHH
Q psy11591          2 FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC---NHCGRAFSDKSNLTVHI   78 (220)
Q Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C---~~C~~~~~~~~~l~~h~   78 (220)
                      |.|..|...|.+...|.+|.-.-..--.|+|++|+|+|....+|..|. +.|......-=   +-=.+...+....+.--
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHR-RWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHR-RWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhh-cccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            678888888888888888865444444588999999998888888884 67743321000   00000000111111000


Q ss_pred             h--hcCCCCcccCchhhhhcCCHHHHHhHHHHhCCcc------------------eecCcCccccCChhhHHHHHhhhcC
Q psy11591         79 R--THTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK------------------FKCNYCEKVYNNPSNLQRHIKTHTD  138 (220)
Q Consensus        79 ~--~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~------------------~~C~~C~~~f~~~~~l~~H~~~h~~  138 (220)
                      +  .-..+..|.|..|++.|....-|+.|+..|...+                  +.+..++-.+...+.-..+...+.+
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~  426 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAG  426 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeec
Confidence            0  0022346999999999999999999987773211                  2334444333333221112111111


Q ss_pred             -CCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhcccc
Q psy11591        139 -NSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       139 -~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                       .....+++++..+.++..--.+.+.-..+..|.|.+|.-+|.+...|.+|+...|..
T Consensus       427 sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  427 SAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             cccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChH
Confidence             122357788877776665545555555567799999999999999999998776543

>KOG3993|consensus

Probab=98.95  E-value=7.2e-11  Score=90.68  Aligned_cols=171  Identities=13%  Similarity=0.106  Sum_probs=90.1

Q ss_pred             cccccchhhcCChhHHHHHHhhhcCCCCcccccccccccCChhHHHHHHhhcCCCCccc---CchhhhhcCCHHHHHhHH
Q psy11591         30 HVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYM---CELCGAEFAQWATLYNHK  106 (220)
Q Consensus        30 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~---C~~C~~~f~~~~~l~~h~  106 (220)
                      |.|.+|...|.+...|..|. =.-.....|.|++|++.|.-..+|..|.+.|-....-.   -+.-..........+.-.
T Consensus       268 yiCqLCK~kYeD~F~LAQHr-C~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHR-CPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhcc-CCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            77888888888888888883 22333345888888888888888888887774432111   000000000000000000


Q ss_pred             HH---hCCcceecCcCccccCChhhHHHHHhhhcCCCc-----------------eeCCccccccCCHHHHHHHHHHcCC
Q psy11591        107 FT---HNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSL-----------------YICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       107 ~~---~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-----------------~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      +.   ....-|.|.+|++.|.+...|++|+-+|.....                 +.+..+...+.....--.+.-.+.+
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~  426 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAG  426 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeec
Confidence            00   012258888899999888888888777653211                 1222222222211111111111111


Q ss_pred             -CCcccccccccccCchhHHHHHhhhcccccCCCCC
Q psy11591        167 -VNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       167 -~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                       .....|.+++-.+.+...-.-+.+.-+.+.-|.|.
T Consensus       427 sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~k  462 (500)
T KOG3993|consen  427 SAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCK  462 (500)
T ss_pred             cccccCCCCCCCCcccCCCCCccccccchhhccccc
Confidence             12345677777676666655565555555555554

>PHA02768 hypothetical protein; Provisional

Probab=98.91  E-value=5.3e-10  Score=61.69  Aligned_cols=42  Identities=14%  Similarity=0.374  Sum_probs=34.5

Q ss_pred             eecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHH
Q psy11591        114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYL  157 (220)
Q Consensus       114 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  157 (220)
                      |.|+.||+.|...++|..|+++|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            678888888888888888888888  578888888888876655

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.77  E-value=4e-09  Score=49.81  Aligned_cols=24  Identities=33%  Similarity=0.790  Sum_probs=13.4

Q ss_pred             HHHHHHHcCCCCcccccccccccC
Q psy11591        157 LKRHKDTHNSVNTFVCEVCNTGFK  180 (220)
Q Consensus       157 l~~H~~~h~~~~~~~C~~C~~~f~  180 (220)
                      |.+|+++|++++||.|+.|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555553

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.72  E-value=9.6e-09  Score=48.49  Aligned_cols=26  Identities=50%  Similarity=1.034  Sum_probs=23.2

Q ss_pred             hHHHHHhhhcCCCceeCCccccccCC
Q psy11591        128 NLQRHIKTHTDNSLYICEICGKDFGT  153 (220)
Q Consensus       128 ~l~~H~~~h~~~~~~~C~~C~~~f~~  153 (220)
                      +|..|+++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999864

...

>PHA00616 hypothetical protein

Probab=98.72  E-value=4.2e-09  Score=55.31  Aligned_cols=32  Identities=25%  Similarity=0.401  Sum_probs=16.1

Q ss_pred             eeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        142 YICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |.|+.||+.|...+.|..|++.|+|++++.|+
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            44555555555555555555555555544443

>PHA00616 hypothetical protein

Probab=98.58  E-value=4.8e-08  Score=51.34  Aligned_cols=35  Identities=17%  Similarity=0.468  Sum_probs=30.1

Q ss_pred             CCCCccchhhhcCHHHHHHHHHHhhCCCCcccccc
Q psy11591          1 MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVC   35 (220)
Q Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   35 (220)
                      ||+|+.||+.|...+.|..|++.|++++++.|+.-
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEE
Confidence            78899999999999999999999888888887654

>PHA00732 hypothetical protein

Probab=98.47  E-value=1.3e-07  Score=57.38  Aligned_cols=44  Identities=30%  Similarity=0.557  Sum_probs=22.7

Q ss_pred             eecCcCccccCChhhHHHHHhh-hcCCCceeCCccccccCCHHHHHHHHHH
Q psy11591        114 FKCNYCEKVYNNPSNLQRHIKT-HTDNSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       114 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      |.|..|++.|.+.+.|..|++. |.+   +.|+.|++.|.   .+..|..+
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhcc
Confidence            4555555555555555555553 322   35555555555   24445433

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.36  E-value=7e-07  Score=50.29  Aligned_cols=51  Identities=24%  Similarity=0.516  Sum_probs=33.1

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcCCC--CcccccccccccCchhHHHHHhhhccc
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHNSV--NTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      .|.||+|++ ..+...|..|....|..  +.+.|++|...+.  ..|..|+..+|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            367777877 45566777776654332  4577888877544  377778776653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.29  E-value=5.4e-07  Score=54.61  Aligned_cols=45  Identities=38%  Similarity=0.727  Sum_probs=32.2

Q ss_pred             ceeCCccccccCCHHHHHHHHHH-cCCCCcccccccccccCchhHHHHHhhh
Q psy11591        141 LYICEICGKDFGTARYLKRHKDT-HNSVNTFVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      ||.|+.|++.|.+.+.|..|++. |.   ++.|+.|+++|.   .|..|..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            46788888888888888888774 44   247888888776   46666644

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.19  E-value=3.2e-06  Score=47.56  Aligned_cols=49  Identities=22%  Similarity=0.436  Sum_probs=23.6

Q ss_pred             cccccchhhcCChhHHHHHHhhhcCCC-CcccccccccccCChhHHHHHHhhc
Q psy11591         30 HVCHVCSKSFRNRGKLNVHYKRVHERI-RTHQCNHCGRAFSDKSNLTVHIRTH   81 (220)
Q Consensus        30 ~~C~~C~~~~~~~~~l~~H~~~~h~~~-~~~~C~~C~~~~~~~~~l~~h~~~~   81 (220)
                      |.|+.|++ ..+...|..|....|..+ +.+.||.|...+.  ..|..|+..+
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            45555555 334455555555555443 2355555554332  2455554443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.02  E-value=2.4e-06  Score=39.03  Aligned_cols=22  Identities=50%  Similarity=0.990  Sum_probs=10.6

Q ss_pred             eeCCccccccCCHHHHHHHHHH
Q psy11591        142 YICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      |.|+.|++.|.+.+.|.+|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3444555555555555554443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.97  E-value=5.9e-06  Score=37.66  Aligned_cols=22  Identities=27%  Similarity=0.824  Sum_probs=13.8

Q ss_pred             ccccccccccCchhHHHHHhhh
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.95  E-value=4.6e-06  Score=38.37  Aligned_cols=23  Identities=39%  Similarity=0.969  Sum_probs=12.2

Q ss_pred             ccccccccccCchhHHHHHhhhc
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45566666666666666665554

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.92  E-value=5.1e-06  Score=39.54  Aligned_cols=25  Identities=32%  Similarity=0.695  Sum_probs=18.3

Q ss_pred             cccccccccccCchhHHHHHhhhcc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      +|.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4677777777777777777777665

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.79  E-value=1.4e-05  Score=51.24  Aligned_cols=73  Identities=21%  Similarity=0.453  Sum_probs=19.1

Q ss_pred             ecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhc
Q psy11591        115 KCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       115 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      .|..|+..|.+...|..|+...++-..-    ....+.....+..+....- ...+.|..|++.|.+...|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            3777888888888888888665543211    1112223334444433221 22578888888888888888888765

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.77  E-value=2.7e-05  Score=35.65  Aligned_cols=23  Identities=43%  Similarity=0.944  Sum_probs=13.1

Q ss_pred             eeCCccccccCCHHHHHHHHHHc
Q psy11591        142 YICEICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~h  164 (220)
                      |.|++|++.|.+...|..|+.++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666554

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.69  E-value=1.3e-05  Score=60.12  Aligned_cols=51  Identities=27%  Similarity=0.538  Sum_probs=43.3

Q ss_pred             CCceeCCc--cccccCCHHHHHHHHHHcC-------------------CCCcccccccccccCchhHHHHHh
Q psy11591        139 NSLYICEI--CGKDFGTARYLKRHKDTHN-------------------SVNTFVCEVCNTGFKVKKHLTQHY  189 (220)
Q Consensus       139 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~  189 (220)
                      ++||+|++  |+|.|+...+|.=|+.--|                   ..+||+|++|+|+|.....|.-|.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            58999988  9999999999988875322                   348999999999999999999885

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.61  E-value=4.1e-05  Score=36.33  Aligned_cols=25  Identities=36%  Similarity=0.798  Sum_probs=16.2

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcC
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~  165 (220)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4666666666666666666666554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.58  E-value=5.4e-05  Score=48.42  Aligned_cols=22  Identities=36%  Similarity=0.711  Sum_probs=0.0

Q ss_pred             cccchhhcCChhHHHHHHhhhc
Q psy11591         32 CHVCSKSFRNRGKLNVHYKRVH   53 (220)
Q Consensus        32 C~~C~~~~~~~~~l~~H~~~~h   53 (220)
                      |..|+..|.+...|..||...|
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H   23 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKH   23 (100)
T ss_dssp             ----------------------
T ss_pred             cccccccccccccccccccccc
Confidence            4444444444444444443333

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.42  E-value=0.00011  Score=39.54  Aligned_cols=31  Identities=16%  Similarity=0.442  Sum_probs=12.8

Q ss_pred             CCcccccccccccCchhHHHHHhhhcccccC
Q psy11591        167 VNTFVCEVCNTGFKVKKHLTQHYKSHSMFIP  197 (220)
Q Consensus       167 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  197 (220)
                      +.|..|++|+..+.+..+|++|+++.|+.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3445555555555555555555555554443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.33  E-value=0.00026  Score=38.13  Aligned_cols=33  Identities=24%  Similarity=0.469  Sum_probs=20.3

Q ss_pred             cCCCceeCCccccccCCHHHHHHHHHHcCCCCc
Q psy11591        137 TDNSLYICEICGKDFGTARYLKRHKDTHNSVNT  169 (220)
Q Consensus       137 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  169 (220)
                      ..+.|-.|++|+..+.+..+|++|+.+.|+.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            345677888888888888888888877777664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.31  E-value=0.00011  Score=33.68  Aligned_cols=23  Identities=30%  Similarity=0.668  Sum_probs=13.7

Q ss_pred             ccccccccccCchhHHHHHhhhcc
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      |+|+.|++... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56667776665 666777766654

>smart00355 ZnF_C2H2 zinc finger

Probab=97.29  E-value=0.00019  Score=33.29  Aligned_cols=23  Identities=35%  Similarity=0.788  Sum_probs=13.5

Q ss_pred             ccccccccccCchhHHHHHhhhc
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      |.|..|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            35566666666666666665544

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.22  E-value=0.0001  Score=55.53  Aligned_cols=53  Identities=30%  Similarity=0.665  Sum_probs=42.3

Q ss_pred             CCcceecCc--CccccCChhhHHHHHhhhc-------------------CCCceeCCccccccCCHHHHHHHHH
Q psy11591        110 NDIKFKCNY--CEKVYNNPSNLQRHIKTHT-------------------DNSLYICEICGKDFGTARYLKRHKD  162 (220)
Q Consensus       110 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  162 (220)
                      .++||.|++  |.+.+.+...|+-|+.--+                   ..+||.|++|+|.|+...+|.=|..
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            347888976  8899998888888875322                   3589999999999999999876653

>PRK04860 hypothetical protein; Provisional

Probab=97.06  E-value=0.00031  Score=48.73  Aligned_cols=40  Identities=20%  Similarity=0.488  Sum_probs=31.9

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchh
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKK  183 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  183 (220)
                      -+|.|. |+.   ....+++|.+++.++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            368887 887   6667788999999989999999988776543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.99  E-value=0.00034  Score=32.36  Aligned_cols=23  Identities=39%  Similarity=0.940  Sum_probs=15.8

Q ss_pred             ccccccccccCchhHHHHHhhhc
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      |.|.+|+..|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45777777777777777776553

>smart00355 ZnF_C2H2 zinc finger

Probab=96.94  E-value=0.0012  Score=30.48  Aligned_cols=23  Identities=39%  Similarity=1.048  Sum_probs=14.7

Q ss_pred             CCCccchhhhcCHHHHHHHHHHh
Q psy11591          2 FKCPQCGALLKNIWSLREHIMIH   24 (220)
Q Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~~   24 (220)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45666666666666666666644

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.75  E-value=0.0012  Score=30.12  Aligned_cols=23  Identities=35%  Similarity=0.642  Sum_probs=12.3

Q ss_pred             eeCCccccccCCHHHHHHHHHHcC
Q psy11591        142 YICEICGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~h~  165 (220)
                      |.|+.|+.... ...|.+|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666655 556666665543

>KOG2785|consensus

Probab=96.74  E-value=0.0072  Score=47.09  Aligned_cols=163  Identities=17%  Similarity=0.286  Sum_probs=96.7

Q ss_pred             CcccccchhhcCChhHHHHHHhhhcCCC----Cccccccc-ccccCChhHH-HHHH--hhcCCCCcccCchhhhhcCCHH
Q psy11591         29 PHVCHVCSKSFRNRGKLNVHYKRVHERI----RTHQCNHC-GRAFSDKSNL-TVHI--RTHTDEKKYMCELCGAEFAQWA  100 (220)
Q Consensus        29 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~----~~~~C~~C-~~~~~~~~~l-~~h~--~~~~~~~~~~C~~C~~~f~~~~  100 (220)
                      .|.|..|...|.+...-+.|+.+.....    +...-|-- -..|...... ..-.  ....++.++.|.+|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            4789999999999988888886543221    11111111 1122211111 1111  1234567789999999999998


Q ss_pred             HHHhHHHHhCCc------------------ceec-------------CcCccccCChhhHHHHHhh------------hc
Q psy11591        101 TLYNHKFTHNDI------------------KFKC-------------NYCEKVYNNPSNLQRHIKT------------HT  137 (220)
Q Consensus       101 ~l~~h~~~~~~~------------------~~~C-------------~~C~~~f~~~~~l~~H~~~------------h~  137 (220)
                      ....|+..-..+                  .+.+             ..+............+...            ..
T Consensus        83 a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~  162 (390)
T KOG2785|consen   83 AHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDED  162 (390)
T ss_pred             hHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchhc
Confidence            888886543110                  0111             1111111111111111110            11


Q ss_pred             CCCceeCCccccccCCHHHHHHHHHHcCCC-----------------------Ccccccccc---cccCchhHHHHHhhh
Q psy11591        138 DNSLYICEICGKDFGTARYLKRHKDTHNSV-----------------------NTFVCEVCN---TGFKVKKHLTQHYKS  191 (220)
Q Consensus       138 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  191 (220)
                      ...|-.|-+|++.+++...-..|+..+||.                       .-+.|-.|+   +.|.+..+.+.||+.
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            123568999999999999999999988863                       237888898   999999999999954

>KOG1146|consensus

Probab=96.63  E-value=0.00051  Score=61.13  Aligned_cols=51  Identities=18%  Similarity=0.334  Sum_probs=32.0

Q ss_pred             cccchhhcCChhHHHHHHhhhcCCCCcccccccccccCChhHHHHHHhhcC
Q psy11591         32 CHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHT   82 (220)
Q Consensus        32 C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~   82 (220)
                      +..++..+.....+..|+...+...+.+.|+.|+..+.....|..|++..+
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskh  489 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKH  489 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccc
Confidence            334445555555555555555555666777777777777777777776633

>PRK04860 hypothetical protein; Provisional

Probab=96.54  E-value=0.0022  Score=44.54  Aligned_cols=38  Identities=21%  Similarity=0.695  Sum_probs=33.7

Q ss_pred             ceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCH
Q psy11591        113 KFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTA  154 (220)
Q Consensus       113 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  154 (220)
                      +|.|. |+.   ....++.|.+++.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            69998 987   678899999999999999999999988654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.53  E-value=0.0017  Score=29.96  Aligned_cols=22  Identities=32%  Similarity=0.890  Sum_probs=13.8

Q ss_pred             eeCCccccccCCHHHHHHHHHH
Q psy11591        142 YICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      |.|..|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.44  E-value=0.0014  Score=30.89  Aligned_cols=22  Identities=41%  Similarity=0.868  Sum_probs=18.3

Q ss_pred             ccccccccccCchhHHHHHhhh
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2231|consensus

Probab=95.90  E-value=0.04  Score=46.72  Aligned_cols=94  Identities=20%  Similarity=0.443  Sum_probs=49.7

Q ss_pred             ChhHHHHHHhhhcCCCCcccccc------cccccCChhHHHHHHhhcCC-CCc----ccCchhhhhcCCHHHHHhHHHHh
Q psy11591         41 NRGKLNVHYKRVHERIRTHQCNH------CGRAFSDKSNLTVHIRTHTD-EKK----YMCELCGAEFAQWATLYNHKFTH  109 (220)
Q Consensus        41 ~~~~l~~H~~~~h~~~~~~~C~~------C~~~~~~~~~l~~h~~~~~~-~~~----~~C~~C~~~f~~~~~l~~h~~~~  109 (220)
                      +...|..|+...|..-..-.|-.      +.....+...|..|++.--. +..    -.|..|...|.....+..|++.+
T Consensus       126 s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~  205 (669)
T KOG2231|consen  126 SVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFD  205 (669)
T ss_pred             HHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccc
Confidence            66777777766664433222211      12233445666666654222 111    34666777777777777776654


Q ss_pred             CCcceecCcC------ccccCChhhHHHHHhhhc
Q psy11591        110 NDIKFKCNYC------EKVYNNPSNLQRHIKTHT  137 (220)
Q Consensus       110 ~~~~~~C~~C------~~~f~~~~~l~~H~~~h~  137 (220)
                      .   |.|..|      +.-|.....|..|.+.+|
T Consensus       206 h---~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  206 H---EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             e---eheeecCcccccchhcccchHHHHHhhhcC
Confidence            3   233333      334555566776666555

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.47  E-value=0.0029  Score=29.80  Aligned_cols=21  Identities=33%  Similarity=0.811  Sum_probs=13.9

Q ss_pred             eeCCccccccCCHHHHHHHHH
Q psy11591        142 YICEICGKDFGTARYLKRHKD  162 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~  162 (220)
                      |.|..|++.|.+...+..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            556677777777766666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=95.36  E-value=0.078  Score=40.90  Aligned_cols=106  Identities=18%  Similarity=0.288  Sum_probs=67.6

Q ss_pred             cccCchhhhhcCCHHHHHhHHHHhCCcc-----------ee--cCcCccccCCh-hhHHHHHh-h------------hcC
Q psy11591         86 KYMCELCGAEFAQWATLYNHKFTHNDIK-----------FK--CNYCEKVYNNP-SNLQRHIK-T------------HTD  138 (220)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~h~~~~~~~~-----------~~--C~~C~~~f~~~-~~l~~H~~-~------------h~~  138 (220)
                      .++|--|.+.|+++..|..||+..+.+.           |.  -..-|++.... +.+..-.. .            ..+
T Consensus       195 r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~  274 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDD  274 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCC
Confidence            3789999999999999999998663221           10  11122222211 11100000 0            011


Q ss_pred             CCc--eeCCccccccCCHHHHHHHHHHcCC---------------------------CCcccccccccccCchhHHHHHh
Q psy11591        139 NSL--YICEICGKDFGTARYLKRHKDTHNS---------------------------VNTFVCEVCNTGFKVKKHLTQHY  189 (220)
Q Consensus       139 ~~~--~~C~~C~~~f~~~~~l~~H~~~h~~---------------------------~~~~~C~~C~~~f~~~~~l~~H~  189 (220)
                      ..+  .+|-.|.....+...|..|+++.|.                           ...-.|-.|...|.....|..||
T Consensus       275 a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  275 AEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             CCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            222  5899999999999999999986542                           12356889999999999999998


Q ss_pred             hh
Q psy11591        190 KS  191 (220)
Q Consensus       190 ~~  191 (220)
                      ..
T Consensus       355 ~e  356 (423)
T KOG2482|consen  355 VE  356 (423)
T ss_pred             cc
Confidence            54

>KOG2785|consensus

Probab=95.33  E-value=0.041  Score=43.03  Aligned_cols=53  Identities=19%  Similarity=0.471  Sum_probs=44.7

Q ss_pred             cceecCcCccccCChhhHHHHHhhhcC-----------------------CCceeCCccc---cccCCHHHHHHHHHHc
Q psy11591        112 IKFKCNYCEKVYNNPSNLQRHIKTHTD-----------------------NSLYICEICG---KDFGTARYLKRHKDTH  164 (220)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~h  164 (220)
                      .|-.|..|+..+.+......||..+++                       ..-+.|-.|+   +.|.+....+.|+...
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K  243 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDK  243 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhc
Confidence            357899999999999999999998876                       2337899998   9999999999999753

>KOG2893|consensus

Probab=95.10  E-value=0.0054  Score=44.59  Aligned_cols=41  Identities=24%  Similarity=0.635  Sum_probs=19.4

Q ss_pred             cccchhhcCChhHHHHHHhhhcCCCCcccccccccccCChhHHHHH
Q psy11591         32 CHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVH   77 (220)
Q Consensus        32 C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h   77 (220)
                      |.+|++.|.+...|+.|++     .+-|+|.+|.+.+.+.-.|..|
T Consensus        13 cwycnrefddekiliqhqk-----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQK-----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhh-----hccceeeeehhhhccCCCceee
Confidence            4455555555555554432     2234555555554444444444

>KOG1146|consensus

Probab=94.96  E-value=0.0091  Score=53.66  Aligned_cols=53  Identities=21%  Similarity=0.402  Sum_probs=37.8

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcC-------------------------CCCcccccccccccCchhHHHHHhhh
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHN-------------------------SVNTFVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      .+.+.|+.|+-.|++...|-.|++..+                         +.++|.|..|.+++.....|.+|+..
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            355566666666666666666655421                         34689999999999999999999854

>KOG4173|consensus

Probab=94.56  E-value=0.016  Score=41.20  Aligned_cols=73  Identities=27%  Similarity=0.632  Sum_probs=43.2

Q ss_pred             eecCc--CccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHH-c---------CCCCcccc--ccccccc
Q psy11591        114 FKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDT-H---------NSVNTFVC--EVCNTGF  179 (220)
Q Consensus       114 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h---------~~~~~~~C--~~C~~~f  179 (220)
                      +.|++  |...|.+...+..|..+-++.   .|.+|.++|.+.--|..|+.. |         -|.-.|+|  ..|+.+|
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KF  156 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKF  156 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhh
Confidence            45544  555666666666665544443   566666666666666666432 2         23445777  3477777


Q ss_pred             CchhHHHHHh
Q psy11591        180 KVKKHLTQHY  189 (220)
Q Consensus       180 ~~~~~l~~H~  189 (220)
                      .+..+-..|+
T Consensus       157 kT~r~RkdH~  166 (253)
T KOG4173|consen  157 KTSRDRKDHM  166 (253)
T ss_pred             hhhhhhhhHH
Confidence            7777777775

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.43  E-value=0.045  Score=25.20  Aligned_cols=18  Identities=39%  Similarity=0.717  Sum_probs=8.7

Q ss_pred             CCccchhhhcCHHHHHHHH
Q psy11591          3 KCPQCGALLKNIWSLREHI   21 (220)
Q Consensus         3 ~C~~C~~~f~~~~~l~~H~   21 (220)
                      .|+.|++.| ....|..|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            455555555 334444444

>KOG2231|consensus

Probab=94.38  E-value=0.098  Score=44.47  Aligned_cols=119  Identities=28%  Similarity=0.559  Sum_probs=72.4

Q ss_pred             ccccccccCChhHHHHHHhhcCCCCcccCchhh---hhcC------CHHHHHhHHHHh-C-Cc----ceecCcCccccCC
Q psy11591         61 CNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCG---AEFA------QWATLYNHKFTH-N-DI----KFKCNYCEKVYNN  125 (220)
Q Consensus        61 C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~---~~f~------~~~~l~~h~~~~-~-~~----~~~C~~C~~~f~~  125 (220)
                      |..| ..|.....|+.|+...|+  .+.|..|-   +.|.      ....|..|++.- . ++    --.|..|...|..
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld  194 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLD  194 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhcc
Confidence            4444 344477889999865443  23444443   3333      244556665543 1 11    1468889999999


Q ss_pred             hhhHHHHHhhhcCCCceeCCcc------ccccCCHHHHHHHHHHcCCCCccccc--ccc-cccCchhHHHHHhh
Q psy11591        126 PSNLQRHIKTHTDNSLYICEIC------GKDFGTARYLKRHKDTHNSVNTFVCE--VCN-TGFKVKKHLTQHYK  190 (220)
Q Consensus       126 ~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~-~~f~~~~~l~~H~~  190 (220)
                      ...|..|++.++    |.|-+|      +.-|..-..|..|.+.+|    |.|.  .|. +.|.....+..+++
T Consensus       195 ~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  195 DDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKFYVAFELEIELK  260 (669)
T ss_pred             HHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC----ccccccccccceeeehhHHHHHHH
Confidence            999999998766    455555      345677788888888776    4565  454 23444434555554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.19  E-value=0.037  Score=27.65  Aligned_cols=23  Identities=30%  Similarity=0.691  Sum_probs=16.5

Q ss_pred             cccccccccccCchhHHHHHhhh
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      +|.|.+|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46777777777777777777643

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2482|consensus

Probab=94.05  E-value=0.19  Score=38.91  Aligned_cols=148  Identities=22%  Similarity=0.339  Sum_probs=90.9

Q ss_pred             HHHHHHHHh-hCCCCcccccchh-hcCChhHHHHHHhhhcCCC---------------------CcccccccccccCChh
Q psy11591         16 SLREHIMIH-TGERPHVCHVCSK-SFRNRGKLNVHYKRVHERI---------------------RTHQCNHCGRAFSDKS   72 (220)
Q Consensus        16 ~l~~H~~~~-~~~~~~~C~~C~~-~~~~~~~l~~H~~~~h~~~---------------------~~~~C~~C~~~~~~~~   72 (220)
                      .|+++|+.- ......+|-.|.. ...+++.+..|+-..|.-.                     ..+.|-+|.+.|.++.
T Consensus       130 aLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkn  209 (423)
T KOG2482|consen  130 ALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKN  209 (423)
T ss_pred             HHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcH
Confidence            345555432 2234467999965 5568888888887666321                     2378999999999999


Q ss_pred             HHHHHHhhcC--CCCc--------ccCc--hhhhhcCC------HHHHHhH---------HHHhCCcc--eecCcCcccc
Q psy11591         73 NLTVHIRTHT--DEKK--------YMCE--LCGAEFAQ------WATLYNH---------KFTHNDIK--FKCNYCEKVY  123 (220)
Q Consensus        73 ~l~~h~~~~~--~~~~--------~~C~--~C~~~f~~------~~~l~~h---------~~~~~~~~--~~C~~C~~~f  123 (220)
                      .|..||+...  ...|        |.-+  .-|++...      ......+         ...++..+  ..|-.|....
T Consensus       210 tLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~  289 (423)
T KOG2482|consen  210 TLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFY  289 (423)
T ss_pred             HHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccch
Confidence            9999997532  1111        1110  01111100      0000000         11111222  5899999999


Q ss_pred             CChhhHHHHHhhhcC---------------------------CCceeCCccccccCCHHHHHHHHHH
Q psy11591        124 NNPSNLQRHIKTHTD---------------------------NSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       124 ~~~~~l~~H~~~h~~---------------------------~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      .+...|..|+...+.                           ...-.|-.|...|-....|..|+..
T Consensus       290 en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  290 ENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             hhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            999999999986442                           1124677888999999999999864

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=94.03  E-value=0.16  Score=33.06  Aligned_cols=25  Identities=20%  Similarity=0.493  Sum_probs=21.0

Q ss_pred             ccc----cccccccCchhHHHHHhhhccc
Q psy11591        170 FVC----EVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       170 ~~C----~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      |.|    ..|++.+.+...|+.|++.+||
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            788    8888888888888888887765

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=93.94  E-value=0.014  Score=42.55  Aligned_cols=48  Identities=25%  Similarity=0.466  Sum_probs=35.0

Q ss_pred             CCccchhhhcCHHHHHHHHHHhhCCCCcccccchhhcCChhHHHHHHhhhcC
Q psy11591          3 KCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHE   54 (220)
Q Consensus         3 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~   54 (220)
                      +|.+|++.|..+..|-+|+++    +.|+|.+|.+.+-+--.|..|-.+.|.
T Consensus        12 wcwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhhh
Confidence            688888888888888877765    348888887776666667777655553

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.92  E-value=0.14  Score=39.59  Aligned_cols=24  Identities=29%  Similarity=0.580  Sum_probs=13.7

Q ss_pred             ccccc--chhhcCChhHHHHHHhhhc
Q psy11591         30 HVCHV--CSKSFRNRGKLNVHYKRVH   53 (220)
Q Consensus        30 ~~C~~--C~~~~~~~~~l~~H~~~~h   53 (220)
                      |.|+.  |..++.....|..|....|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H  177 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQH  177 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhc
Confidence            45653  5555555666666665444

>TIGR00622 ssl1 transcription factor ssl1

Probab=93.60  E-value=0.068  Score=34.55  Aligned_cols=48  Identities=25%  Similarity=0.402  Sum_probs=26.5

Q ss_pred             CCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhcc
Q psy11591        144 CEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       144 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      |--|...|.......  ...-.....|+|+.|...|-..-++-.|...|.
T Consensus        58 C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        58 CFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             ccCcCCCCCCccccc--ccccccccceeCCCCCCccccccchhhhhhccC
Confidence            666666665432110  000122345777777777777777777766654

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.44  E-value=0.2  Score=38.87  Aligned_cols=125  Identities=22%  Similarity=0.489  Sum_probs=79.3

Q ss_pred             ccccc--cccccCChhHHHHHHhhcCCCCcccCchhh---hhcCCH------HHHHhHHHHh-CCc----ceecCcCccc
Q psy11591         59 HQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCELCG---AEFAQW------ATLYNHKFTH-NDI----KFKCNYCEKV  122 (220)
Q Consensus        59 ~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~---~~f~~~------~~l~~h~~~~-~~~----~~~C~~C~~~  122 (220)
                      |.||.  |......-..|..|....++.  +.|.+|-   ++|+..      ..|..|...- .+.    --.|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            67775  555555456788888876553  5566665   345433      3444443322 111    1368999999


Q ss_pred             cCChhhHHHHHhhhcCCCceeCCccccc-------cCCHHHHHHHHHHcCCCCcccccc--cc----cccCchhHHHHHh
Q psy11591        123 YNNPSNLQRHIKTHTDNSLYICEICGKD-------FGTARYLKRHKDTHNSVNTFVCEV--CN----TGFKVKKHLTQHY  189 (220)
Q Consensus       123 f~~~~~l~~H~~~h~~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~~C~~--C~----~~f~~~~~l~~H~  189 (220)
                      |.+-..|..|++..+.    .|-.|++.       |++...|..|.+.-|    |.|.+  |-    +.|.+...|+.|+
T Consensus       230 FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf~~~~el~~h~  301 (493)
T COG5236         230 FYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVFPYHTELLEHL  301 (493)
T ss_pred             ecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEeccHHHHHHHH
Confidence            9999999999997653    45555443       667777777766433    55543  32    4688899999997


Q ss_pred             hhcc
Q psy11591        190 KSHS  193 (220)
Q Consensus       190 ~~h~  193 (220)
                      ..-|
T Consensus       302 ~~~h  305 (493)
T COG5236         302 TRFH  305 (493)
T ss_pred             HHHh
Confidence            5433

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.39  E-value=0.083  Score=26.31  Aligned_cols=22  Identities=18%  Similarity=0.517  Sum_probs=17.4

Q ss_pred             ceeCCccccccCCHHHHHHHHH
Q psy11591        141 LYICEICGKDFGTARYLKRHKD  162 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~  162 (220)
                      +|.|.+|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4778888888888888888865

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.32  E-value=0.057  Score=26.73  Aligned_cols=9  Identities=22%  Similarity=0.910  Sum_probs=3.8

Q ss_pred             eecCcCccc
Q psy11591        114 FKCNYCEKV  122 (220)
Q Consensus       114 ~~C~~C~~~  122 (220)
                      |.|..||..
T Consensus         2 ~~C~~CGy~   10 (33)
T cd00350           2 YVCPVCGYI   10 (33)
T ss_pred             EECCCCCCE
Confidence            344444444

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.92  E-value=0.029  Score=45.56  Aligned_cols=67  Identities=21%  Similarity=0.347  Sum_probs=58.8

Q ss_pred             CceeCCccccccCCHHHHHHHHH--HcCCC--Cccccc--ccccccCchhHHHHHhhhcccccCCCCCCCCCC
Q psy11591        140 SLYICEICGKDFGTARYLKRHKD--THNSV--NTFVCE--VCNTGFKVKKHLTQHYKSHSMFIPPEQFPGLDP  206 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~  206 (220)
                      .++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|..+|.+..+..+......
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSS  360 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCc
Confidence            36889999999999999999999  89999  999999  799999999999999999999887776555443

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.90  E-value=0.017  Score=46.91  Aligned_cols=150  Identities=25%  Similarity=0.362  Sum_probs=100.5

Q ss_pred             CCcccccchhhcCChhHHHHHHhh-hcCCC--Cccccc--ccccccCChhHHHHHHhhcCCCCcccCchh--hhhcCCHH
Q psy11591         28 RPHVCHVCSKSFRNRGKLNVHYKR-VHERI--RTHQCN--HCGRAFSDKSNLTVHIRTHTDEKKYMCELC--GAEFAQWA  100 (220)
Q Consensus        28 ~~~~C~~C~~~~~~~~~l~~H~~~-~h~~~--~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C--~~~f~~~~  100 (220)
                      .++.|..|...|.....|..|... .|.++  +++.|+  .|++.|.....+..|...+.+..++.+..-  ...+....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            467888888888888888888743 78888  888898  799999888888888888888777666442  22222222


Q ss_pred             HHHhHH------HHhCCcceecC--cCccccCChhhHHHHHhhhcCCC--ceeCCccccccCCHHHHHHHHHHcCCCCcc
Q psy11591        101 TLYNHK------FTHNDIKFKCN--YCEKVYNNPSNLQRHIKTHTDNS--LYICEICGKDFGTARYLKRHKDTHNSVNTF  170 (220)
Q Consensus       101 ~l~~h~------~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  170 (220)
                      ....+.      .......+.+.  .|...+.....+..|...+...+  .+.+..|.+.+.....+..|.+.+....+.
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPL  447 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCce
Confidence            111111      11122233332  25566666667777766666555  456677899999998998988888877766


Q ss_pred             ccccccc
Q psy11591        171 VCEVCNT  177 (220)
Q Consensus       171 ~C~~C~~  177 (220)
                      .|..+..
T Consensus       448 ~~~~~~~  454 (467)
T COG5048         448 LCSILKS  454 (467)
T ss_pred             eeccccc
Confidence            6655443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.57  E-value=0.3  Score=31.68  Aligned_cols=54  Identities=17%  Similarity=0.413  Sum_probs=42.5

Q ss_pred             cceecCcCccccCChhhHHHHHhhhcC------------------------------------------CCceeC----C
Q psy11591        112 IKFKCNYCEKVYNNPSNLQRHIKTHTD------------------------------------------NSLYIC----E  145 (220)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~~h~~------------------------------------------~~~~~C----~  145 (220)
                      +.+.|..|+..+.. +.+..|++..+.                                          -.-|.|    .
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~   88 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPP   88 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCC
Confidence            45789999988765 788888884332                                          011899    9


Q ss_pred             ccccccCCHHHHHHHHHHcCC
Q psy11591        146 ICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       146 ~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      .|+..+.+...+.+|++.+||
T Consensus        89 ~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   89 HCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCcEeccHHHHHHHHHHhcC
Confidence            999999999999999998775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=91.76  E-value=0.27  Score=31.88  Aligned_cols=21  Identities=19%  Similarity=0.377  Sum_probs=15.2

Q ss_pred             CCcccccchhhcCChhHHHHH
Q psy11591         28 RPHVCHVCSKSFRNRGKLNVH   48 (220)
Q Consensus        28 ~~~~C~~C~~~~~~~~~l~~H   48 (220)
                      -|..|+.|+-++.+...|.+-
T Consensus        14 LP~~CpiCgLtLVss~HLARS   34 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARS   34 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHh
Confidence            467788888877777777764

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=90.74  E-value=0.14  Score=23.83  Aligned_cols=9  Identities=33%  Similarity=0.969  Sum_probs=5.3

Q ss_pred             ccccccccc
Q psy11591        171 VCEVCNTGF  179 (220)
Q Consensus       171 ~C~~C~~~f  179 (220)
                      .|+.||+.|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            556666655

Several members are annotated as putative helicases.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=90.29  E-value=0.2  Score=32.39  Aligned_cols=30  Identities=20%  Similarity=0.630  Sum_probs=18.2

Q ss_pred             eecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCH
Q psy11591        114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTA  154 (220)
Q Consensus       114 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  154 (220)
                      ..|+.||..|...           ++.|..||+||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            4566677666544           23566677777666544

The function of members of this family is unknown.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.21  E-value=0.18  Score=27.82  Aligned_cols=30  Identities=30%  Similarity=0.510  Sum_probs=22.0

Q ss_pred             hCCCCcccccchhhcCChhHHHHHHhhhcC
Q psy11591         25 TGERPHVCHVCSKSFRNRGKLNVHYKRVHE   54 (220)
Q Consensus        25 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~   54 (220)
                      .++.-+.|+-|+..|........|.+..|.
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            345557788888888888888888776663

>PHA00626 hypothetical protein

Probab=89.02  E-value=0.13  Score=28.41  Aligned_cols=13  Identities=23%  Similarity=0.572  Sum_probs=7.6

Q ss_pred             CcccccccccccC
Q psy11591        168 NTFVCEVCNTGFK  180 (220)
Q Consensus       168 ~~~~C~~C~~~f~  180 (220)
                      ..|.|+.||+.|+
T Consensus        22 nrYkCkdCGY~ft   34 (59)
T PHA00626         22 DDYVCCDCGYNDS   34 (59)
T ss_pred             cceEcCCCCCeec
Confidence            4566666666553

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.23  E-value=0.26  Score=27.23  Aligned_cols=28  Identities=21%  Similarity=0.452  Sum_probs=17.8

Q ss_pred             CCCceeCCccccccCCHHHHHHHHHHcC
Q psy11591        138 DNSLYICEICGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       138 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~  165 (220)
                      |+.-+.||.||..|.......+|....|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            4555667777777766666666665444

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=87.71  E-value=0.32  Score=24.21  Aligned_cols=9  Identities=22%  Similarity=0.855  Sum_probs=4.4

Q ss_pred             eecCcCccc
Q psy11591        114 FKCNYCEKV  122 (220)
Q Consensus       114 ~~C~~C~~~  122 (220)
                      |.|..||..
T Consensus         3 ~~C~~CG~i   11 (34)
T cd00729           3 WVCPVCGYI   11 (34)
T ss_pred             EECCCCCCE
Confidence            445555544

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG4173|consensus

Probab=87.67  E-value=0.34  Score=34.75  Aligned_cols=77  Identities=23%  Similarity=0.537  Sum_probs=42.7

Q ss_pred             ccCch--hhhhcCCHHHHHhHHHHhCCcceecCcCccccCChhhHHHHHhhh----------cCCCceeCCc--cccccC
Q psy11591         87 YMCEL--CGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTH----------TDNSLYICEI--CGKDFG  152 (220)
Q Consensus        87 ~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h----------~~~~~~~C~~--C~~~f~  152 (220)
                      +.|++  |-..|........|......  -.|..|.+.|++...|..|+...          .|..-|.|-+  |+..|.
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~--~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFk  157 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHG--NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFK  157 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhccc--chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhh
Confidence            44543  44555555555554322211  14666666666666666665432          2445567744  777777


Q ss_pred             CHHHHHHHHHHcC
Q psy11591        153 TARYLKRHKDTHN  165 (220)
Q Consensus       153 ~~~~l~~H~~~h~  165 (220)
                      +...-..|+..-|
T Consensus       158 T~r~RkdH~I~~H  170 (253)
T KOG4173|consen  158 TSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhHHHHhc
Confidence            7777777765433

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=87.59  E-value=0.6  Score=23.70  Aligned_cols=9  Identities=22%  Similarity=0.582  Sum_probs=3.7

Q ss_pred             ccccccccc
Q psy11591        170 FVCEVCNTG  178 (220)
Q Consensus       170 ~~C~~C~~~  178 (220)
                      .+|+.|+..
T Consensus        26 vrC~~C~~~   34 (37)
T PF13719_consen   26 VRCPKCGHV   34 (37)
T ss_pred             EECCCCCcE
Confidence            344444433

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=86.43  E-value=0.98  Score=31.65  Aligned_cols=12  Identities=25%  Similarity=0.686  Sum_probs=6.7

Q ss_pred             CCCCcccccccc
Q psy11591        165 NSVNTFVCEVCN  176 (220)
Q Consensus       165 ~~~~~~~C~~C~  176 (220)
                      .|+.|-+|++||
T Consensus       145 ~ge~P~~CPiCg  156 (166)
T COG1592         145 EGEAPEVCPICG  156 (166)
T ss_pred             cCCCCCcCCCCC
Confidence            345556666665

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=86.42  E-value=0.46  Score=33.24  Aligned_cols=25  Identities=28%  Similarity=0.733  Sum_probs=19.9

Q ss_pred             cceecCcCccccCChhhHHHHHhhhcCCCceeCCcccc
Q psy11591        112 IKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGK  149 (220)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  149 (220)
                      ..|.|++||..             +.++.|..||.||.
T Consensus       133 ~~~vC~vCGy~-------------~~ge~P~~CPiCga  157 (166)
T COG1592         133 KVWVCPVCGYT-------------HEGEAPEVCPICGA  157 (166)
T ss_pred             CEEEcCCCCCc-------------ccCCCCCcCCCCCC
Confidence            36999999876             45678889999984

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=85.85  E-value=0.085  Score=36.48  Aligned_cols=17  Identities=18%  Similarity=0.432  Sum_probs=10.7

Q ss_pred             ccccccccccCchhHHH
Q psy11591        170 FVCEVCNTGFKVKKHLT  186 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~  186 (220)
                      ++|+.||++|.....+.
T Consensus        29 ~~c~~c~~~f~~~e~~~   45 (154)
T PRK00464         29 RECLACGKRFTTFERVE   45 (154)
T ss_pred             eeccccCCcceEeEecc
Confidence            66777777766655443

>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0

Probab=85.61  E-value=0.35  Score=32.17  Aligned_cols=58  Identities=26%  Similarity=0.505  Sum_probs=29.8

Q ss_pred             CCCCcccCchhhhhcCCHHHHHhHHHHhCCcceecCcCccccCC--hhhHHHHHhhhcCCCceeCCccccccCCHH
Q psy11591         82 TDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNN--PSNLQRHIKTHTDNSLYICEICGKDFGTAR  155 (220)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~--~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  155 (220)
                      .+.+.|+|++|..+..++.-|+         |=.|  ||+..-+  ...|.+|...+.     .||+|..+|++++
T Consensus        76 ~d~~lYeCnIC~etS~ee~FLK---------PneC--CgY~iCn~Cya~LWK~~~~yp-----vCPvCkTSFKss~  135 (140)
T PF05290_consen   76 LDPKLYECNICKETSAEERFLK---------PNEC--CGYSICNACYANLWKFCNLYP-----VCPVCKTSFKSSS  135 (140)
T ss_pred             cCCCceeccCcccccchhhcCC---------cccc--cchHHHHHHHHHHHHHcccCC-----CCCcccccccccc
Confidence            3446677777776665553221         2233  4433222  234555544332     6777777777654

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=85.48  E-value=0.15  Score=37.55  Aligned_cols=13  Identities=23%  Similarity=0.519  Sum_probs=9.4

Q ss_pred             ccccccccccCch
Q psy11591        170 FVCEVCNTGFKVK  182 (220)
Q Consensus       170 ~~C~~C~~~f~~~  182 (220)
                      ..|+.||++|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5689999876643

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=85.18  E-value=0.8  Score=23.25  Aligned_cols=10  Identities=30%  Similarity=0.776  Sum_probs=4.7

Q ss_pred             eCCccccccC
Q psy11591        143 ICEICGKDFG  152 (220)
Q Consensus       143 ~C~~C~~~f~  152 (220)
                      .|+.|+..|.
T Consensus         4 ~CP~C~~~~~   13 (38)
T TIGR02098         4 QCPNCKTSFR   13 (38)
T ss_pred             ECCCCCCEEE
Confidence            4444544443

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=84.52  E-value=1.2  Score=22.44  Aligned_cols=12  Identities=17%  Similarity=0.600  Sum_probs=5.1

Q ss_pred             eCCccccccCCH
Q psy11591        143 ICEICGKDFGTA  154 (220)
Q Consensus       143 ~C~~C~~~f~~~  154 (220)
                      .|+.|+..|.-.
T Consensus         4 ~Cp~C~~~y~i~   15 (36)
T PF13717_consen    4 TCPNCQAKYEID   15 (36)
T ss_pred             ECCCCCCEEeCC
Confidence            344444444433

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=83.26  E-value=1.1  Score=23.82  Aligned_cols=10  Identities=20%  Similarity=0.743  Sum_probs=4.9

Q ss_pred             eecCcCcccc
Q psy11591        114 FKCNYCEKVY  123 (220)
Q Consensus       114 ~~C~~C~~~f  123 (220)
                      |.|..||..|
T Consensus         3 Y~C~~Cg~~~   12 (44)
T smart00659        3 YICGECGREN   12 (44)
T ss_pred             EECCCCCCEe
Confidence            4455555444

present in RNA polymerase I, II and III

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=82.76  E-value=0.93  Score=29.99  Aligned_cols=30  Identities=10%  Similarity=0.203  Sum_probs=19.0

Q ss_pred             eecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCH
Q psy11591        114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTA  154 (220)
Q Consensus       114 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  154 (220)
                      ..|+.||+.|...           ++.|..|++||..|...
T Consensus        10 r~Cp~cg~kFYDL-----------nk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYDL-----------NRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCcccccc-----------CCCCccCCCcCCccCcc
Confidence            4677777776543           33566777777776554

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>KOG2186|consensus

Probab=82.08  E-value=1  Score=33.48  Aligned_cols=46  Identities=28%  Similarity=0.719  Sum_probs=30.0

Q ss_pred             eecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHH
Q psy11591        114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKD  162 (220)
Q Consensus       114 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  162 (220)
                      |.|..||....-+ .+.+|+...++ .-|.|-.|++.|-. .....|..
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            5677777776544 45557766666 45777778877776 44556654

>KOG2186|consensus

Probab=81.71  E-value=1.4  Score=32.89  Aligned_cols=45  Identities=24%  Similarity=0.622  Sum_probs=30.3

Q ss_pred             ccccccccccCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHH
Q psy11591         59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHK  106 (220)
Q Consensus        59 ~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~  106 (220)
                      |.|..||...... .+..|+...++ .-|.|.-|+++|.. .....|.
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC-CeeEEeeccccccc-chhhhhh
Confidence            6777777776644 45557776666 56777778877777 4555654

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=81.15  E-value=2.2  Score=29.78  Aligned_cols=34  Identities=24%  Similarity=0.491  Sum_probs=22.2

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccc
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG  178 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  178 (220)
                      .....-|.|+.|+..|+....+.         .-|.|+.||..
T Consensus       104 e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~  137 (158)
T TIGR00373       104 ETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAM  137 (158)
T ss_pred             ccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCE
Confidence            34455677777777777766663         24777777753

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=80.83  E-value=0.81  Score=25.77  Aligned_cols=11  Identities=18%  Similarity=0.618  Sum_probs=6.2

Q ss_pred             CcceecCcCcc
Q psy11591        111 DIKFKCNYCEK  121 (220)
Q Consensus       111 ~~~~~C~~C~~  121 (220)
                      ..+|.|+.||+
T Consensus        48 g~~Y~Cp~CGF   58 (61)
T COG2888          48 GNPYRCPKCGF   58 (61)
T ss_pred             CCceECCCcCc
Confidence            44566666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	220
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-30
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-13
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		9e-11
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-04
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-10
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-09
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-10
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		9e-10
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		9e-09
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		9e-10
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		7e-05
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		7e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		8e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-09
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		9e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-09
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-09
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		6e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-09
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-09
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-09
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-08
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-07
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-08
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		8e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-08
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		9e-07
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-08
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		6e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		7e-08
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-07
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-07
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		4e-04
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-07
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		6e-07
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		7e-06
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		3e-06
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		4e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		7e-06
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		3e-05
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		4e-05
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		4e-05
1x6h_A	86	Solution Structures Of The C2h2 Type Zinc Finger Do		6e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		8e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-04
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		8e-05
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		1e-04
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		3e-04
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  127 bits (320), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 89/169 (52%), Gaps = 2/169 (1%)
Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           + CP+CG        L EH   HTGE+P+ C  C KSF ++  L  H +R H   + ++C
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHTGEKPYKC 80
Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             CG++FS ++NL  H RTHT EK Y C  CG  F+Q A L  H+ TH   K +KC  C 
Sbjct: 81  PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140
Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNT 169
           K ++   NL  H +THT    Y C  CGK F     L  H+ TH    T
Sbjct: 141 KSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 46/104 (44%)
Query: 94  AEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGT 153
           +EF   +++        +  + C  C K ++   +L  H +THT    Y C  CGK F  
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 154 ARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIP 197
            + L RH+ TH     + C  C   F  + +L  H ++H+   P
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKP 105

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 57  RTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FK 115
           + ++C  CG++FS  SNL  H RTHT EK Y C  CG  F+Q + L  H+ TH   K +K
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 116 CNYCEKVYNNPSNLQRHIKTHTD 138
           C  C K ++   +L RH +TH +
Sbjct: 63  CPECGKSFSRSDHLSRHQRTHQN 85

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE 173
           +KC  C K ++  SNLQ+H +THT    Y C  CGK F  +  L++H+ TH     + C 
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 174 VCNTGFKVKKHLTQHYKSH 192
            C   F    HL++H ++H
Sbjct: 65  ECGKSFSRSDHLSRHQRTH 83

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 4   CPQ--CGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           CP   C  + ++  ++R+H+  H G R HVC  C K+F    KL  H + VH   +  QC
Sbjct: 8   CPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRH-QLVHTGEKPFQC 65
Query: 62  --NHCGRAFSDKSNLTVHIRTHTDEKKYMCEL--CGAEFAQWATLYNHKFTHNDIK 113
               CG+ FS   NL  H+R HT ++ Y+C    C  +FAQ   L +H  TH   K
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 92  CGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYIC--EICGK 149
           C   F   + +  H  TH      C  C K +   S L+RH   HT    + C  E CGK
Sbjct: 13  CTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK 72
Query: 150 DFGTARYLKRHKDTHNSVNTFVC--EVCNTGFKVKKHLTQHYKSHS 193
            F     L+ H   H     +VC  + CN  F    +L  H  +H+
Sbjct: 73  RFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F  +  L+ H  R+H   +  QC  C R FS +++L  HIRTHT E
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGE 60
Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA   T   H   H
Sbjct: 61  KPFACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 27/101 (26%)
Query: 64  CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVY 123
           C R FS K+NL  HIR HT +K + C +C   F+Q A+                      
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQAS---------------------- 49
Query: 124 NNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH 164
                L  HI+THT    + C+ICG+ F T     RH   H
Sbjct: 50  -----LNAHIRTHTGEKPFACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C++ ++  +NL  HI+ HT    + C IC ++F     L  H  TH     F C++C   
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 179 FKVKKHLTQHYKSH 192
           F      T+H K H
Sbjct: 72  FATLHTRTRHTKIH 85

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
          F C  CG   K   +L  H++IH+  RP+ C  C K F  +  +  H   +H   + H+C
Sbjct: 2  FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH-TFIHTGEKPHKC 60
Query: 62 NHCGRAFSDKSNLTVHIRTHT 82
            CG+AFS  SNL  H R HT
Sbjct: 61 QVCGKAFSQSSNLITHSRKHT 81

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 61  CNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYC 119
           C  CG++F   S L+ H+  H+D + Y C+ CG  F Q + +  H F H   K  KC  C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 120 EKVYNNPSNLQRHIKTHT 137
            K ++  SNL  H + HT
Sbjct: 64  GKAFSQSSNLITHSRKHT 81

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%)
Query: 114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE 173
           F C  C K +   S L  H+  H+D   Y C+ CGK F     +K+H   H       C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 174 VCNTGFKVKKHLTQHYKSHS 193
           VC   F    +L  H + H+
Sbjct: 62  VCGKAFSQSSNLITHSRKHT 81

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F   G L  H  R+H   +  QC  C R FS   +LT HIRTHT E
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA+      H   H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 84  EKKYMC--ELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHTDNS 140
           E+ Y C  E C   F+Q  +L  H   H   K F+C  C + ++   +L  HI+THT   
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 141 LYICEICGKDFGTARYLKRHKDTH 164
            + C+ICG+ F  +   KRH   H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C++ ++   +L RHI+ HT    + C IC ++F  + +L  H  TH     F C++C   
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 179 FKVKKHLTQHYKSH 192
           F       +H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F  +  L+ H  R+H   +  QC  C R FS  + L  HIRTHT E
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGE 60
Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA   T   H   H
Sbjct: 61  KPFACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 27/101 (26%)
Query: 64  CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVY 123
           C R FS K+NL  HIR HT +K + C +C   F+Q                         
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQH------------------------ 47
Query: 124 NNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH 164
              + L +HI+THT    + C+ICG+ F T     RH   H
Sbjct: 48  ---TGLNQHIRTHTGEKPFACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C++ ++  +NL  HI+ HT    + C IC ++F     L +H  TH     F C++C   
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 179 FKVKKHLTQHYKSH 192
           F       +H K H
Sbjct: 72  FATLHTRDRHTKIH 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 59  HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
           H+C  CG+ FS K  L  H+R HT  K Y C+ C    A  ++L  H   H+D + FKC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 118 YCEKVYNNPSNLQRHIKTHTDNS 140
            C     N S L  H+++HT +S
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGDS 91

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 115 KCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV 174
           KC  C K ++    L+ H++ HT    Y C+ C      +  L +H   H+    F C++
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 175 CNTGFKVKKHLTQHYKSHSMFIPPEQ 200
           C    +    LT H +SH+    P  
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDSGPSS 95

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F +   L  H  R+H   +  QC  C R FS   +LT HIRTHT E
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA+      H   H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 64  CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKV 122
           C R FSD SNLT HIR HT +K + C +C   F++   L  H  TH   K F C+ C + 
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 123 YNNPSNLQRHIKTH 136
           +      +RH K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C++ +++ SNL RHI+ HT    + C IC ++F  + +L  H  TH     F C++C   
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 179 FKVKKHLTQHYKSH 192
           F       +H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F    +L  H  R+H   +  QC  C R FS   +LT HIRTHT E
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA+      H   H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 84  EKKYMC--ELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHTDNS 140
           E+ Y C  E C   F++ A L  H   H   K F+C  C + ++   +L  HI+THT   
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 141 LYICEICGKDFGTARYLKRHKDTH 164
            + C+ICG+ F  +   KRH   H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 36/74 (48%)
Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C++ ++  + L RHI+ HT    + C IC ++F  + +L  H  TH     F C++C   
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 179 FKVKKHLTQHYKSH 192
           F       +H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F     L  H  R+H   +  QC  C R FS   +LT HIRTHT E
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA+      H   H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 84  EKKYMC--ELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHTDNS 140
           E+ Y C  E C   F++ A L  H   H   K F+C  C + ++   +L  HI+THT   
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 141 LYICEICGKDFGTARYLKRHKDTH 164
            + C+ICG+ F  +   KRH   H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C++ ++  ++L RHI+ HT    + C IC ++F  + +L  H  TH     F C++C   
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 179 FKVKKHLTQHYKSH 192
           F       +H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F    +L  H  R+H   +  QC  C R FS   +LT HIRTHT E
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA+      H   H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 84  EKKYMC--ELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHTDNS 140
           E+ Y C  E C   F++   L  H   H   K F+C  C + ++   +L  HI+THT   
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 141 LYICEICGKDFGTARYLKRHKDTH 164
            + C+ICG+ F  +   KRH   H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C++ ++    L RHI+ HT    + C IC ++F  + +L  H  TH     F C++C   
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 179 FKVKKHLTQHYKSH 192
           F       +H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F    +L  H  R+H   +  QC  C R FS   +LT HIRTHT E
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 59
Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA+      H   H
Sbjct: 60  KPFACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 84  EKKYMC--ELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHTDNS 140
           E+ Y C  E C   F++   L  H   H   K F+C  C + ++   +L  HI+THT   
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 141 LYICEICGKDFGTARYLKRHKDTH 164
            + C+ICG+ F  +   KRH   H
Sbjct: 61  PFACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C++ ++    L RHI+ HT    + C IC ++F  + +L  H  TH     F C++C   
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 70
Query: 179 FKVKKHLTQHYKSH 192
           F       +H K H
Sbjct: 71  FARSDERKRHTKIH 84

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 61  CNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYC 119
           C  CGR F+   NL +H RTHTDE+ Y C++C   F +   L +H++ H+  K FKC  C
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79
Query: 120 EKVYNNPSNLQRHIKTHTDNS 140
            K +     L  H   H   S
Sbjct: 80  GKGFCQSRTLAVHKTLHMQTS 100

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 40/86 (46%)
Query: 113 KFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC 172
           +F C +C + +    NL  H +THTD   Y C+IC K F    +L+ H+  H+    F C
Sbjct: 17  EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76
Query: 173 EVCNTGFKVKKHLTQHYKSHSMFIPP 198
           + C  GF   + L  H   H     P
Sbjct: 77  QECGKGFCQSRTLAVHKTLHMQTSSP 102

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F    +L  H  R+H   +  QC  C R FS   +LT HIRTHT E
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA+      H   H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 84  EKKYMC--ELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHTDNS 140
           E+ Y C  E C   F++   L  H   H   K F+C  C + ++   +L  HI+THT   
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 141 LYICEICGKDFGTARYLKRHKDTH 164
            + C+ICG+ F  +   KRH   H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C++ ++    L RHI+ HT    + C IC ++F  + +L  H  TH     F C++C   
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 179 FKVKKHLTQHYKSH 192
           F       +H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 5   PQCGALLKNIWSLREHIMIHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCN 62
           P C      +  L+ H   HTGE+P+ C    C + F    +L  H +R H  ++  QC 
Sbjct: 12  PGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-HTGVKPFQCK 70
Query: 63  HCGRAFSDKSNLTVHIRTHTDEKKYMCEL--CGAEFAQWATLYNH 105
            C R FS   +L  H RTHT EK + C    C  +FA+   L  H
Sbjct: 71  TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 114 FKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVNT 169
           F C Y  C K Y   S+LQ H + HT    Y C+   C + F  +  LKRH+  H  V  
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 170 FVCEVCNTGFKVKKHLTQHYKSHSMFIP 197
           F C+ C   F    HL  H ++H+   P
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKP 94

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 54  ERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCEL--CGAEFAQWATLYNHKFTH 109
           +R  TH C++  CG+ ++  S+L  H+RTHT EK Y C+   CG +FA+   L  H   H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 110 NDIK-FKCNYCEKVYNNPSNLQRHIKTH 136
              + F+C  C++ ++   +L  H+K H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 116 CNY--CEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVNTFV 171
           C+Y  C K Y   S+L+ H++THT    Y C+   CG  F  +  L RH   H     F 
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 172 CEVCNTGFKVKKHLTQHYKSH 192
           C+ C+  F    HL  H K H
Sbjct: 68  CQKCDRAFSRSDHLALHMKRH 88

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 54  ERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCEL--CGAEFAQWATLYNHKFTH 109
            R  TH C++  CG+ ++  S+L  H+RTHT EK Y C+   CG +FA+   L  H   H
Sbjct: 2   SRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 61
Query: 110 NDIK-FKCNYCEKVYNNPSNLQRHIKTH 136
              + F+C  C++ ++   +L  H+K H
Sbjct: 62  TGHRPFQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 116 CNY--CEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVNTFV 171
           C+Y  C K Y   S+L+ H++THT    Y C+   CG  F  +  L RH   H     F 
Sbjct: 9   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 68
Query: 172 CEVCNTGFKVKKHLTQHYKSH 192
           C+ C+  F    HL  H K H
Sbjct: 69  CQKCDRAFSRSDHLALHMKRH 89

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Query: 6   QCGALLKNIWSLREHIMIHTGERPHVC--HVCSKSFRNRGKLNVH-YKRVHERIRTHQCN 62
            CGA     W L+ H+  HTGE+P  C    C K F +   L  H      E+  T   +
Sbjct: 19  DCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSD 78
Query: 63  HCGRAFSDKSNLTVHIRTHTDEK--KYMC--ELCGAEFAQWATLYNHKFTH-NDIKFKCN 117
            C   F+ K+N+  H     + K   Y+C  E CG  F +   L  H+F+H   + ++C 
Sbjct: 79  GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 138
Query: 118 Y--CEKVYNNPSNLQRHIKTHT 137
           +  C+K ++ PS L+RH K H 
Sbjct: 139 HEGCDKRFSLPSRLKRHEKVHA 160

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 85  KKYMCEL--CGAEFAQWATLYNHKFTHNDIK-FKCNY--CEKVYNNPSNLQRHIKTHTDN 139
           K+Y+C    CGA + +   L  H   H   K F C    CEK + +  +L RH  THT  
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70
Query: 140 SLYICEICGKD--FGTARYLKRHKDTHNSVN--TFVC--EVCNTGFKVKKHLTQHYKSHS 193
             + C+  G D  F T   +K+H +  +++    +VC  E C   FK    L  H  SH+
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130
Query: 194 MFIPPE 199
             +P E
Sbjct: 131 QQLPYE 136

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 23  IHTGERPHVCHV--CSKS---FRNRGKLNVHYKRVHERIRTHQC--NHCGRAFSDKSNLT 75
           IH   +  VCH   CS+    F+ +  L VH +R H   + H+C    C +++S   NL 
Sbjct: 28  IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-HTGEKPHKCTFEGCRKSYSRLENLK 86
Query: 76  VHIRTHTDEKKYMC--ELCGAEFAQWATLYNHK-FTH-NDIKFKCNY--CEKVYNNPSNL 129
            H+R+HT EK YMC  E C   F+  +    H+  TH N+  + C    C K Y +PS+L
Sbjct: 87  THLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSL 146
Query: 130 QRHIKT 135
           ++H+KT
Sbjct: 147 RKHVKT 152

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 37/169 (21%)
Query: 35  CSKSFRNRGKL--NVHYKRVHERIRTHQCNHCG-----RAFSDKSNLTVHIRTHTDEKKY 87
           CS+ F ++ +L  +++ + +H   +   C+  G     R F  +  L VH+R HT EK +
Sbjct: 9   CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPH 68
Query: 88  MCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYIC--E 145
            C   G                         C K Y+   NL+ H+++HT    Y+C  E
Sbjct: 69  KCTFEG-------------------------CRKSYSRLENLKTHLRSHTGEKPYMCEHE 103
Query: 146 ICGKDFGTARYLKRHKD-THNSVNTFVCEV--CNTGFKVKKHLTQHYKS 191
            C K F  A    +H++ TH++   +VC++  C   +     L +H K+
Sbjct: 104 GCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 116 CNY--CEKVYNNPSNLQRHIKTHTDNSLYIC--EICGKDFGTARYLKRHKDTHNSVNTFV 171
           C+Y  C KVY   S+L+ H++THT    Y C  E C   F  +  L RH   H     F 
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77
Query: 172 CEVCNTGFKVKKHLTQHYKSH 192
           C VCN  F    HL  H K H
Sbjct: 78  CGVCNRSFSRSDHLALHMKRH 98

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 60  QCNHCGRAFSDKSNLTVHIRTHTDEKKYMCEL--CGAEFAQWATLYNHKFTHNDIK-FKC 116
           +C   G++F  K  L  HIR HT EK + C    CG  FA+   L  HK TH   K FKC
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123
Query: 117 NY--CEKVYNNPSNLQRHIKTHTDN 139
            +  C++ + N S+ ++H+  HT +
Sbjct: 124 EFEGCDRRFANSSDRKKHMHVHTSD 148

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 57  RTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
           R ++C+ CG++FS  S+L+ H RTHT EK Y C+ CG  F Q + L  H   H
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 28/56 (50%)
Query: 142 YICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIP 197
           Y C+ CGK F  +  L +H+ TH     + C+ C   F  + HL  H++ H+   P
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 60  QCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHK----FTHNDIKFK 115
           +C  C + F  K  L VH R HT EK + C  CG  + +   L  H+       ++  F 
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 116 CNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRH 160
           C+ C++ +     L+ H+ +HT    Y C  C + F   + L+ H
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 4  CPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERI-RTHQCN 62
          C  CG + ++++ L  H + H+GE+P+ C VC   F+ + +++ H +     + + + C 
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 63 HCGRAFSDKSNLTVHIR 79
           CG+ FS   +L  HI+
Sbjct: 70 SCGKGFSRPDHLNGHIK 86

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 61  CNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFK---CN 117
           C  CG+ F D  +L  H  +H+ EK Y C +CG  F +   +  H  +H+    K   C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 118 YCEKVYNNPSNLQRHIK 134
            C K ++ P +L  HIK
Sbjct: 70  SCGKGFSRPDHLNGHIK 86

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 137 TDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI 196
           + +S   CEICGK F    +L RHK +H+    + C VC   FK K  ++ H +SH   +
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 57  RTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHND 111
           + + C  CG+AFS  S L  H R HT EK Y C  CG  F+Q + L NH+  H  
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS 67

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 60  QCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHK 106
           QC  C R FS   +LT HIRTHT EK + C++CG +FA+      H+
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR 51

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKD 162
           F+C  C + ++   +L  HI+THT    + C+ICG+ F  +   KRH+D
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD 52

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 27 ERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEK 85
          ++P+ C  C  SFR +G L  H K VH   + ++CN CG  F+  +NL  H R H+ EK
Sbjct: 15 DKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 55  RIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAE--FAQWATLYNHKFTH 109
           RIR+H C+H  CG+ +   S+L  H RTHT EK + C   G E  FA+   L  H+ TH
Sbjct: 14  RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 79  RTHTDEKKYMCELCGAEFAQWATLYNH---KFTHNDIKFKCNYCEKVYNNPSNLQRHIK 134
           RTH+ EK Y C +C A F Q  T+  H   K T N  KF C +C+ V    S+L  H++
Sbjct: 8   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR 66

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 58  THQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNH 105
           + +C++CG+ F     L +H+RTHT EK Y CE C    AQ  +L  H
Sbjct: 4   SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYH 51

>pdb|1X6H|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Transcriptional Repressor Ctcf Length = 86

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 23 IHTGERPHVCHVCSKSFRNRGKLNVHYKRVHER---IRTHQCNHCGRAFSDKSNLTVHI 78
           HTGE+P+ C  C K+FR +  L++H+KR H+         C+ CG+ F+ ++ +  H 
Sbjct: 9  THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA 67

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 64  CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKV 122
           CG++F+ KS    H+  H   + Y C +CG +F     L  H   H  IK ++CN C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 123 YNNPSNLQRHIKTHTDN 139
           +    +  RH+ + T +
Sbjct: 75  FMWRDSFHRHVTSCTKS 91

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 137 TDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI 196
           + + LY C+ CGK F       RH   H  +  + C VC   FK+K HL  H K H+   
Sbjct: 6   SGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT--- 61
Query: 197 PPEQFPGLDPTSCNM 211
                 G+ P  CN+
Sbjct: 62  ------GIKPYECNI 70

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 27 ERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
          ERP  C+ C K++R+   L+ H +R H   R   C  CG+ F D+S +  H++ H ++
Sbjct: 2  ERPFFCNFCGKTYRDASGLSRH-RRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK 58

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 27/50 (54%)
Query: 142 YICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKS 191
           YICE CG        LK+H  TH  V  + C  CN  FK K +LT+H KS
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 35 CSKSFRNRGKLNVHYKRVHERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCELC 92
          C + F NR  LN H K  H   ++  C    CG++F+ K +L  H++ H+D + Y+CE  
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Query: 93 G 93
          G
Sbjct: 75 G 75

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 52  VHERIRTHQC--NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
           V  ++R + C    C R FS    LT HIR HT +K + C +C   F++   L  H  TH
Sbjct: 13  VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	220
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-41
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-39
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-33
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-22
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-20
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	9e-34
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-33
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-30
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-26
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-26
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-25
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-25
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-22
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-19
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-25
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-15
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-24
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-18
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-15
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-24
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-23
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-23
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-19
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-22
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-19
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-21
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-21
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-20
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-21
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-20
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-20
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-20
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-19
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-19
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-14
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-16
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-16
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-16
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-15
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-15
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-12
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-10
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	4e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	7e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	7e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	8e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	8e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	2e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	7e-07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	3e-04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	3e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	4e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  138 bits (350), Expect = 2e-41
 Identities = 65/178 (36%), Positives = 89/178 (50%), Gaps = 2/178 (1%)

Query: 16  SLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLT 75
           S      +  GE+P+ C  C KSF     L  H +R H   + ++C  CG++FSDK +LT
Sbjct: 8   SSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLT 66

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIK 134
            H RTHT EK Y C  CG  F+Q A L  H+ TH   K + C  C K ++  ++L+ H +
Sbjct: 67  RHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR 126

Query: 135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH 192
           THT    Y C  CGK F     L  H+ TH     + C  C   F  +  L  H ++H
Sbjct: 127 THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  132 bits (336), Expect = 2e-39
 Identities = 67/164 (40%), Positives = 88/164 (53%), Gaps = 2/164 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           + CP+CG        L EH   HTGE+P+ C  C KSF ++  L  H +R H   + ++C
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHTGEKPYKC 80

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             CG++FS ++NL  H RTHT EK Y C  CG  F+Q A L  H+ TH   K +KC  C 
Sbjct: 81  PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140

Query: 121 KVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH 164
           K ++   NL  H +THT    Y C  CGK F     L  H+ TH
Sbjct: 141 KSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  117 bits (295), Expect = 4e-33
 Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 2/137 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           +KCP+CG    +   L  H   HTGE+P+ C  C KSF  R  L  H +R H   + + C
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH-QRTHTGEKPYAC 108

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCE 120
             CG++FS  ++L  H RTHT EK Y C  CG  F++   L+ H+ TH   K +KC  C 
Sbjct: 109 PECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG 168

Query: 121 KVYNNPSNLQRHIKTHT 137
           K ++    L  H +THT
Sbjct: 169 KSFSRRDALNVHQRTHT 185

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 89.8 bits (224), Expect = 1e-22
 Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 1/127 (0%)

Query: 67  AFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNN 125
           +    S+          EK Y C  CG  F++   L  H+ TH   K +KC  C K +++
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 126 PSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHL 185
             +L RH +THT    Y C  CGK F     L+ H+ TH     + C  C   F    HL
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121

Query: 186 TQHYKSH 192
             H ++H
Sbjct: 122 RAHQRTH 128

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 84.0 bits (209), Expect = 2e-20
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           + CP+CG     +  LR H   HTGE+P+ C  C KSF     L+ H +R H   + ++C
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH-QRTHTGEKPYKC 164

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEK 85
             CG++FS +  L VH RTHT +K
Sbjct: 165 PECGKSFSRRDALNVHQRTHTGKK 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  118 bits (298), Expect = 9e-34
 Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 14/184 (7%)

Query: 20  HIMIHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNH--CGRAFSDKSNLT 75
              +    + ++C    C  ++    KL  H    H   +   C    C + F+   +LT
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 76  VHIRTHTDEKKYMCE--LCGAEFAQWATLYNHKFTHNDIK---FKCNY--CEKVYNNPSN 128
            H  THT EK + C+   C   F   A +  H    ++IK   + C++  C K +   + 
Sbjct: 62  RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

Query: 129 LQRHIKTHTDNSLYIC--EICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLT 186
           L+ H  +HT    Y C  E C K F     LKRH+  H        + C+   K      
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181

Query: 187 QHYK 190
           +H  
Sbjct: 182 KHVA 185

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  116 bits (293), Expect = 6e-33
 Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 15/178 (8%)

Query: 2   FKC--PQCGALLKNIWSLREHIMIHTGERPHVCH--VCSKSFRNRGKLNVHYKRVHERIR 57
           + C    CGA     W L+ H+  HTGE+P  C    C K F +   L  H    H   +
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH-SLTHTGEK 71

Query: 58  THQCNH--CGRAFSDKSNLTVHIRTHTDEKK--YMCEL--CGAEFAQWATLYNHKFTHND 111
              C+   C   F+ K+N+  H     + K   Y+C    CG  F +   L  H+F+H  
Sbjct: 72  NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ 131

Query: 112 IK-FKCN--YCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGT-ARYLKRHKDTHN 165
              ++C    C+K ++ PS L+RH K H        + C     T   YLK   + H 
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 74.2 bits (183), Expect = 1e-16
 Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 10/119 (8%)

Query: 2   FKCPQ--CGALLKNIWSLREHIMIHTGER--PHVCHV--CSKSFRNRGKLNVHYKRVHER 55
           F C    C        ++++H       +   +VCH   C K+F+   +L VH +  H +
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH-QFSHTQ 131

Query: 56  IRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKF-THND 111
              ++C H  C + FS  S L  H + H        + C      W     H    H D
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 26/120 (21%), Positives = 39/120 (32%), Gaps = 29/120 (24%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTH 136
                   K+Y+C                             C   YN    LQ H+  H
Sbjct: 3   EKALPVVYKRYICSFAD-------------------------CGAAYNKNWKLQAHLCKH 37

Query: 137 TDNSLYICE--ICGKDFGTARYLKRHKDTHNSVNTFVCE--VCNTGFKVKKHLTQHYKSH 192
           T    + C+   C K F +  +L RH  TH     F C+   C+  F  K ++ +H+   
Sbjct: 38  TGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  108 bits (272), Expect = 3e-30
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)

Query: 2   FKCPQCGALLKNIWSLREHIM---IHTGERPHVCHVC-----SKSFRNRGKLNVHYKRVH 53
            +   C     +   L  HI    IH   +  VCH        + F+ +  L VH  R H
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH-MRRH 62

Query: 54  ERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCE--LCGAEFAQWATLYNHKF-T 108
              + H+C    C +++S   NL  H+R+HT EK YMCE   C   F+  +    H+  T
Sbjct: 63  TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122

Query: 109 HNDIK-FKCNY--CEKVYNNPSNLQRHIKTHT 137
           H++ K + C    C K Y +PS+L++H+KT  
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 98.4 bits (246), Expect = 2e-26
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 15/153 (9%)

Query: 27  ERPHVCHVCSKSFRNRGKLNVH--YKRVHERIRTHQCNHCG-----RAFSDKSNLTVHIR 79
           E       CS+ F ++ +L  H   + +H   +   C+  G     R F  +  L VH+R
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 80  THTDEKKYMC--ELCGAEFAQWATLYNHKFTHNDIK-FKCNY--CEKVYNNPSNLQRHIK 134
            HT EK + C  E C   +++   L  H  +H   K + C +  C K ++N S+  +H  
Sbjct: 61  RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 135 -THTDNSLYICEI--CGKDFGTARYLKRHKDTH 164
            TH++   Y+C++  C K +     L++H  T 
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 21/136 (15%), Positives = 39/136 (28%), Gaps = 51/136 (37%)

Query: 60  QCNHCGRAFSDKSNLTVHI---RTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKC 116
           + + C + F  +  L  HI     H + K+++C   G                      C
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----------------------C 42

Query: 117 NYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCN 176
           +   + +     L  H++ HT    + C   G                          C 
Sbjct: 43  SRELRPFKAQYMLVVHMRRHTGEKPHKCTFEG--------------------------CR 76

Query: 177 TGFKVKKHLTQHYKSH 192
             +   ++L  H +SH
Sbjct: 77  KSYSRLENLKTHLRSH 92

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 97.6 bits (244), Expect = 2e-26
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 6/119 (5%)

Query: 24  HTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR---T 80
            +G     C  C K F ++  L VH  R H   +  +C  CG+ +  K NL  H      
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60

Query: 81  HTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRH-IKTHT 137
           +  E+ + C +C   F +   L  H  +H     +KC+ C + +    +LQ H IK H+
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 94.5 bits (236), Expect = 3e-25
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVH--YKRVHERIRTH 59
            +CP C     + + L+ H   HTGE+P  C  C K +  +  L  H     ++   +  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 60  QCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHK 106
            C+ C   F  +  L +H+ +HT E  Y C  C  +F Q   L +H 
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 77.9 bits (193), Expect = 7e-19
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 2   FKCPQCGALLKNIWSLREH---IMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRT 58
           F+CP+CG       +L EH     ++  E+   C VC ++FR R +L +H    H     
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH-MVSHTGEMP 94

Query: 59  HQCNHCGRAFSDKSNLTVH-IRTHTDEK 85
           ++C+ C + F  K +L  H I+ H+   
Sbjct: 95  YKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 96.6 bits (241), Expect = 1e-25
 Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 15/136 (11%)

Query: 23  IHTGERPHVCHVCSKSFRNRGKLNVHYKRVH---------ERIRTHQCNHCGRAFSDKSN 73
           I   +       C ++F    +L  H   +                +C   G++F  K  
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTH-VTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK 77

Query: 74  LTVHIRTHTDEKKYMC--ELCGAEFAQWATLYNHKFTHNDIK-FKCNY--CEKVYNNPSN 128
           L  HIR HT EK + C    CG  FA+   L  HK TH   K FKC +  C++ + N S+
Sbjct: 78  LVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSD 137

Query: 129 LQRHIKTHTDNSLYIC 144
            ++H+  HT +     
Sbjct: 138 RKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 87.0 bits (216), Expect = 7e-22
 Identities = 35/152 (23%), Positives = 50/152 (32%), Gaps = 16/152 (10%)

Query: 37  KSFRNRGKLNVHY--KRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYM------ 88
            S  +   +      K + E   +     C R FS    L  H+                
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 89  ---CELCGAEFAQWATLYNHKFTHNDIK-FKCNY--CEKVYNNPSNLQRHIKTHTDNSLY 142
              C   G  F     L NH   H   K F C +  C K++    NL+ H +THT    +
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121

Query: 143 ICEI--CGKDFGTARYLKRHKDTHNSVNTFVC 172
            CE   C + F  +   K+H   H S  +   
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 80.4 bits (199), Expect = 2e-19
 Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 5/91 (5%)

Query: 3   KCPQCGALLKNIWSLREHIMIHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQ 60
           +CP+ G   K  + L  HI +HTGE+P  C    C K F     L +H KR H   +  +
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH-KRTHTGEKPFK 122

Query: 61  CNH--CGRAFSDKSNLTVHIRTHTDEKKYMC 89
           C    C R F++ S+   H+  HT +K    
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 92.5 bits (231), Expect = 9e-25
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 24  HTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTD 83
                PH C VC K F  + KL  H  R H  ++ ++C  C  A +D S+L  H+R H+D
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 84  EKKYMCELCGAEFAQWATLYNHKFTH 109
           E+ + C++C       + L  H  +H
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 86.7 bits (216), Expect = 1e-22
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           KC  CG        L+ H+  HTG +P+ C  C  +  +   LN H  R+H   R  +C
Sbjct: 9  HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHSDERPFKC 67

Query: 62 NHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
            C  A  + S LTVH+R+HT +     
Sbjct: 68 QICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 72.1 bits (178), Expect = 6e-17
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)

Query: 80  THTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHTD 138
           +      + CE+CG  F++   L  H   H  +K +KC  C+    + S+L +H++ H+D
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 139 NSLYICEICGKDFGTARYLKRHKDTH 164
              + C+IC      +  L  H  +H
Sbjct: 62  ERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 67.1 bits (165), Expect = 5e-15
 Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 55/134 (41%)

Query: 59  HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNY 118
           H+C  CG+ FS K  L  H+R HT  K Y                           KC  
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPY---------------------------KCKT 41

Query: 119 CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTG 178
           C+    + S+L +H++ H+D   + C+IC                ++S            
Sbjct: 42  CDYAAADSSSLNKHLRIHSDERPFKCQICPYAS-----------RNSS------------ 78

Query: 179 FKVKKHLTQHYKSH 192
                 LT H +SH
Sbjct: 79  -----QLTVHLRSH 87

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 92.2 bits (230), Expect = 2e-24
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 8/119 (6%)

Query: 25  TGERPHVC--HVCSKSFRNRGKLNVHYKRVHERIRTHQCN--HCGRAFSDKSNLTVHIRT 80
           + +RP +C    C+K +     L +H  R H   + +QC+   C R FS    L  H R 
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60

Query: 81  HTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNY--CEKVYNNPSNLQRHIKTH 136
           HT  K + C+ C  +F++   L  H  TH   K F C +  C+K +     L RH   H
Sbjct: 61  HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 76.8 bits (190), Expect = 2e-18
 Identities = 34/138 (24%), Positives = 52/138 (37%), Gaps = 29/138 (21%)

Query: 59  HQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKC 116
             C +  C + +   S+L +H R HT EK Y C+                          
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKD----------------------- 43

Query: 117 NYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV-- 174
             CE+ ++    L+RH + HT    + C+ C + F  + +LK H  TH     F C    
Sbjct: 44  --CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPS 101

Query: 175 CNTGFKVKKHLTQHYKSH 192
           C   F     L +H+  H
Sbjct: 102 CQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 5/84 (5%)

Query: 2   FKC--PQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTH 59
           ++C    C         L+ H   HTG +P  C  C + F     L  H  R H   +  
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTH-TRTHTGEKPF 95

Query: 60  QCN--HCGRAFSDKSNLTVHIRTH 81
            C    C + F+    L  H   H
Sbjct: 96  SCRWPSCQKKFARSDELVRHHNMH 119

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 91.4 bits (228), Expect = 3e-24
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 23  IHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHT 82
             +G++ + C  C KSF ++ + + H   +H  +R + C  CG+ F  K +L  H++ HT
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 83  DEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNL 129
             K Y C +C   F    +   H+   +  K ++    E+     S  
Sbjct: 62  GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 87.9 bits (219), Expect = 7e-23
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 4/103 (3%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           + C QCG    +      H+ +H G RP+ C VC K F+ +  L  H  ++H  I+ ++C
Sbjct: 11  YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHTGIKPYEC 68

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYN 104
           N C + F  + +   H    +  K Y          + +   +
Sbjct: 69  NICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 28/110 (25%)

Query: 79  RTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTD 138
              + +K Y C+                            C K + + S   RH+  H  
Sbjct: 3   SGSSGDKLYPCQ----------------------------CGKSFTHKSQRDRHMSMHLG 34

Query: 139 NSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQH 188
              Y C +CGK F    +L  H   H  +  + C +C   F  +    +H
Sbjct: 35  LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 134 KTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHS 193
              + + LY C+ CGK F       RH   H  +  + C VC   FK+K HL  H K H+
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 90.3 bits (225), Expect = 1e-23
 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 8/114 (7%)

Query: 2   FKCPQ--CGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTH 59
             CP   C  + ++  ++R+H+  H G R HVC  C K+F    KL  H + VH   +  
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRH-QLVHTGEKPF 63

Query: 60  QCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCEL--CGAEFAQWATLYNHKFTH 109
           QC    CG+ FS   NL  H+R HT ++ Y+C    C  +FAQ   L +H  TH
Sbjct: 64  QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 88.3 bits (220), Expect = 6e-23
 Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 11/119 (9%)

Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVH-ERIRTHQCNHCGRAFSDKSNLTVHIRTHTD 83
            R   C    C+K FR+   +  H    H  R   H C  CG+AF + S L  H   HT 
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKH-LHTHGPR--VHVCAECGKAFVESSKLKRHQLVHTG 59

Query: 84  EKKYMCEL--CGAEFAQWATLYNHKFTHNDIK-FKCNY--CEKVYNNPSNLQRHIKTHT 137
           EK + C    CG  F+    L  H   H   + + C +  C K +   +NL+ HI TH 
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 79.1 bits (196), Expect = 3e-19
 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTH 59
             C +CG        L+ H ++HTGE+P  C    C K F     L  H  R+H   R +
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH-VRIHTGDRPY 93

Query: 60  QCNH--CGRAFSDKSNLTVHIRTHTDEKKY 87
            C    C + F+  +NL  HI TH   K  
Sbjct: 94  VCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 114 FKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFV 171
             C +  C K++ + S +++H+ TH     ++C  CGK F  +  LKRH+  H     F 
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGPRV-HVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64

Query: 172 CEV--CNTGFKVKKHLTQHYKSH 192
           C    C   F +  +L  H + H
Sbjct: 65  CTFEGCGKRFSLDFNLRTHVRIH 87

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 86.8 bits (216), Expect = 1e-22
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 16 SLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVH----ERIRTHQCNHCGRAFSDK 71
          S       HTGE+P+ C  C K+FR +  L++H  + +           C+ CG+ F+ +
Sbjct: 2  SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAFVCSKCGKTFTRR 60

Query: 72 SNLTVHIRTHTDEKKYMCELCGAEF 96
          + +  H            E  G   
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 70.2 bits (173), Expect = 3e-16
 Identities = 23/85 (27%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 73  NLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-----FKCNYCEKVYNNPS 127
           +     RTHT EK Y C  C   F Q   L  H   ++D       F C+ C K +   +
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 128 NLQRHIKTHTDNSLYICEICGKDFG 152
            + RH            E  G   G
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSSG 86

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 7/38 (18%), Positives = 10/38 (26%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSF 39
          F C +CG       ++  H     G           S 
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.0 bits (92), Expect = 8e-05
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 128 NLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNT----FVCEVCNTGFKVKK 183
           +     +THT    Y C  C K F   + L  H   ++  N     FVC  C   F  + 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 184 HLTQHYKSH 192
            + +H  + 
Sbjct: 62  TMARHADNC 70

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 87.1 bits (217), Expect = 1e-22
 Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 30/130 (23%)

Query: 16  SLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLT 75
                 +    ++                    +           C  CGR F+   NL 
Sbjct: 4   GSSGGRLPSKTKKE-------------------FI----------CKFCGRHFTKSYNLL 34

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIK 134
           +H RTHTDE+ Y C++C   F +   L +H++ H+  K FKC  C K +     L  H  
Sbjct: 35  IHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94

Query: 135 THTDNSLYIC 144
            H   S    
Sbjct: 95  LHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 86.7 bits (216), Expect = 2e-22
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
           F C  CG      ++L  H   HT ERP+ C +C K+FR +  L  H + +H + +  +C
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKEKPFKC 76

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
             CG+ F     L VH   H        
Sbjct: 77  QECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 79.0 bits (196), Expect = 2e-19
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 1/95 (1%)

Query: 71  KSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNL 129
            S  +        +K+++C+ CG  F +   L  H+ TH D + + C+ C K +    +L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 130 QRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH 164
           + H   H+    + C+ CGK F  +R L  HK  H
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 83.7 bits (208), Expect = 2e-21
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVH--ERIRTH 59
            C  CG + ++++ L  H + H+GE+P+ C VC   F+ + +++ H  R H     + +
Sbjct: 8  VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSHDGSVGKPY 66

Query: 60 QCNHCGRAFSDKSNLTVHI-RTHTDEK 85
           C  CG+ FS   +L  HI + H+   
Sbjct: 67 ICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 82.2 bits (204), Expect = 9e-21
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 24  HTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTD 83
            +G     C +C K FR+   LN H K  H   + + C  CG  F  K  ++ H+R+H  
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 84  E--KKYMCELCGAEFAQWATLYNH-KFTH 109
              K Y+C+ CG  F++   L  H K  H
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 79.8 bits (198), Expect = 6e-20
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 59  HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHN--DIK-FK 115
             C  CG+ F D  +L  H  +H+ EK Y C +CG  F +   +  H  +H+    K + 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 116 CNYCEKVYNNPSNLQRHIK-THT 137
           C  C K ++ P +L  HIK  H+
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 22/57 (38%), Positives = 31/57 (54%)

Query: 136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH 192
            + +S   CEICGK F    +L RHK +H+    + C VC   FK K  ++ H +SH
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 82.5 bits (205), Expect = 4e-21
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 59  HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNY 118
            QC  C R FS   +LT HIRTHT EK + C++CG +FA+      H+   + +    + 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 119 CEKVYNNPSNLQRHI---KTHT 137
            E++ +   +L+  +   K   
Sbjct: 64  VEELLSKNYHLENEVARLKKLV 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 59.4 bits (145), Expect = 3e-12
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNT---F 170
           F+C  C + ++   +L  HI+THT    + C+ICG+ F  +   KRH+D           
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ----HILPI 59

Query: 171 VCEVCNTGFKVKKHLTQH 188
           + +          HL   
Sbjct: 60  LEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 85  KKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHTDNSLYI 143
           K + C +C   F++   L  H  TH   K F C+ C + +      +RH          +
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILP-IL 60

Query: 144 CEICGKDFGTARYLKRHK 161
            +   +      +L+   
Sbjct: 61  EDKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 8/57 (14%), Positives = 12/57 (21%), Gaps = 3/57 (5%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRT 58
          F C  CG         + H  I     P +     +       L         +   
Sbjct: 32 FACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENE--VARLKKLV 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 13/51 (25%), Positives = 21/51 (41%)

Query: 142 YICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH 192
           + C IC ++F  + +L  H  TH     F C++C   F       +H    
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 81.4 bits (202), Expect = 8e-21
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 16 SLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVH--ERIRTHQCNHCGRAFSDKSN 73
          S       H+GE+P+ C++C   F   G + +H       E +    C HC    + KS+
Sbjct: 2  SSGSSGRTHSGEKPYECYICHARFTQSGTMKMH-ILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 74 LTVHIRT-HTDEKKY 87
          L VH+R  H+     
Sbjct: 61 LGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 63.7 bits (156), Expect = 5e-14
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 73  NLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH---NDIKFKCNYCEKVYNNPSNL 129
           +     RTH+ EK Y C +C A F Q  T+  H       N  KF C +C+ V    S+L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 130 QRHIKT-HT 137
             H++  H+
Sbjct: 62  GVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 128 NLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNT--FVCEVCNTGFKVKKHL 185
           +     +TH+    Y C IC   F  +  +K H    ++ N   F C  C+T    K  L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 186 TQHYKSH 192
             H +  
Sbjct: 62  GVHLRKQ 68

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 80.5 bits (200), Expect = 2e-20
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQC 61
          F C  CG   K   +L  H++IH+  RP+ C  C K F  +  +  H   +H   + H+C
Sbjct: 2  FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH-TFIHTGEKPHKC 60

Query: 62 NHCGRAFSDKSNLTVHIRTHT 82
            CG+AFS  SNL  H R HT
Sbjct: 61 QVCGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 80.2 bits (199), Expect = 4e-20
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 58  THQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKC 116
           +  C  CG++F   S L+ H+  H+D + Y C+ CG  F Q + +  H F H   K  KC
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 117 NYCEKVYNNPSNLQRHIKTHT 137
             C K ++  SNL  H + HT
Sbjct: 61  QVCGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 54.7 bits (133), Expect = 2e-10
 Identities = 25/79 (31%), Positives = 34/79 (43%)

Query: 114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE 173
           F C  C K +   S L  H+  H+D   Y C+ CGK F     +K+H   H       C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 174 VCNTGFKVKKHLTQHYKSH 192
           VC   F    +L  H + H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 80.6 bits (200), Expect = 3e-20
 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 15/92 (16%)

Query: 2  FKCP--QCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTH 59
          + CP   C        SL  HI IHTG++P  C +C ++F     L  H       IRTH
Sbjct: 5  YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH-------IRTH 57

Query: 60 ------QCNHCGRAFSDKSNLTVHIRTHTDEK 85
                 C+ CGR F+       H + H  +K
Sbjct: 58 TGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 80.2 bits (199), Expect = 4e-20
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 3/85 (3%)

Query: 27  ERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
           ERP+ C V  C + F   G L  H  R+H   +  QC  C R FS   +LT HIRTHT E
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60

Query: 85  KKYMCELCGAEFAQWATLYNHKFTH 109
           K + C++CG +FA+      H   H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 72.5 bits (179), Expect = 3e-17
 Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 27/103 (26%)

Query: 62  NHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEK 121
             C R FS   +LT HIR HT +K + C +C   F++                       
Sbjct: 10  ESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSR----------------------- 46

Query: 122 VYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH 164
                 +L  HI+THT    + C+ICG+ F  +   KRH   H
Sbjct: 47  ----SDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 78.4 bits (194), Expect = 2e-19
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 24 HTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNH--CGRAFSDKSNLTVHIR 79
           +G     C    C + F NR  LN H K  H   ++  C    CG++F+ K +L  H++
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 80 THTDEKKYMCELCGAEF 96
           H+D + Y+CE  G   
Sbjct: 62 LHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 114 FKCNY--CEKVYNNPSNLQRHIK-THTDNSLYICE--ICGKDFGTARYLKRHKDTHNSVN 168
             C++  C ++++N   L  H K  H     + C    CGK F   ++LK H   H+   
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 169 TFVCEVCNTGF 179
            ++CE      
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 2  FKCPQ--CGALLKNIWSLREHIMIHTGERPHVCHVCSKSF 39
          F CP+  CG        L+EH+ +H+  R ++C     S 
Sbjct: 39 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 76.7 bits (190), Expect = 6e-19
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 16 SLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLT 75
          S           R + C  C KSF +   L+ H +R H   + ++C+ CG+AF  +S+L 
Sbjct: 5  SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLI 63

Query: 76 VHIRTHTDEKKY 87
           H R HT     
Sbjct: 64 GHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.9 bits (149), Expect = 7e-13
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 71  KSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNL 129
             +         + ++Y C+ CG  F+  + L  H+ TH   K +KC+ C K +   S+L
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 130 QRHIKTHT 137
             H + HT
Sbjct: 63  IGHHRVHT 70

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 18/66 (27%), Positives = 29/66 (43%)

Query: 127 SNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLT 186
            +  R      +   Y C+ CGK F  +  L +H+ TH     + C+ C   F  + HL 
Sbjct: 4   GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63

Query: 187 QHYKSH 192
            H++ H
Sbjct: 64  GHHRVH 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 76.7 bits (190), Expect = 6e-19
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 17 LREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTV 76
                IH+GE+P+ C  C K+F     L  H +RVH   + ++C  CG+AFS  S L  
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLIN 60

Query: 77 HIRTHTDEKKY 87
          H R HT     
Sbjct: 61 HQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 74  LTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRH 132
            +     H+ EK Y C  CG  F++ + L  H+  H   K +KC  C K ++  S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 133 IKTHT 137
            + HT
Sbjct: 62  QRIHT 66

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.1 bits (95), Expect = 3e-05
 Identities = 16/65 (24%), Positives = 23/65 (35%)

Query: 129 LQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQH 188
                  H+    Y C  CGK F  +  L +H+  H     + C  C   F     L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 189 YKSHS 193
            + H+
Sbjct: 62  QRIHT 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 76.3 bits (189), Expect = 7e-19
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 16 SLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLT 75
              H  +   ++P+ C  C  SFR +G L  H K VH   + ++CN CG  F+  +NL 
Sbjct: 4  HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 76 VHIRTHTDEKKY 87
           H R H+ EK Y
Sbjct: 63 THTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 65.2 bits (160), Expect = 1e-14
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 72  SNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQ 130
            +   H      +K Y C+ C A F     L +HK  H   K ++CN C   +N P+NL+
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 131 RHIKTHT 137
            H + H+
Sbjct: 63  THTRIHS 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 15/66 (22%), Positives = 22/66 (33%)

Query: 127 SNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLT 186
            +   H      +  Y C+ C   F     L  HK  H     + C +C   F    +L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 187 QHYKSH 192
            H + H
Sbjct: 63  THTRIH 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 72.1 bits (177), Expect = 4e-17
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 4/70 (5%)

Query: 24 HTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTH---QCNHCGRAFSDKSNLTVHIRT 80
           +G     C +C  + R +  LN H +R H          C  CG+ F    ++  H   
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

Query: 81 HTDEKKYMCE 90
                   +
Sbjct: 61 SHPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 63.2 bits (154), Expect = 9e-14
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 59  HQCNHCGRAFSDKSNLTVHIRTHTD---EKKYMCELCGAEFAQWATLYNHKFTH 109
            QC  CG     K++L  H R H +     ++ CE CG  F +  ++  H+   
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 57.8 bits (140), Expect = 9e-12
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 5/77 (6%)

Query: 81  HTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK----FKCNYCEKVYNNPSNLQRHIKTH 136
            +      CE+CG    Q A+L  H+  H +      F C +C K +  P ++  H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 137 TDNSLYIC-EICGKDFG 152
               L    E  G   G
Sbjct: 62  HPALLLAPQESSGPSSG 78

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 54.7 bits (132), Expect = 1e-10
 Identities = 14/70 (20%), Positives = 20/70 (28%), Gaps = 3/70 (4%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHT---GERPHVCHVCSKSFRNRGKLNVHYKRVHERIRT 58
           +C  CG   +   SL  H   H          C  C K F     +  H  + H  +  
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 59 HQCNHCGRAF 68
                G + 
Sbjct: 68 APQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.9 bits (109), Expect = 3e-07
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 5/67 (7%)

Query: 142 YICEICGKDFGTARYLKRHKDTHNSVNT---FVCEVCNTGFKVKKHLTQHYKSH--SMFI 196
             CEICG        L  H+  H        F CE C   F+    +  H      ++ +
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 197 PPEQFPG 203
            P++  G
Sbjct: 68  APQESSG 74

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 70.6 bits (174), Expect = 1e-16
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 24 HTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTD 83
           +   P  C  CS S  ++  L +H +R+H   R  +CN+C       SNL+ H++    
Sbjct: 4  GSSGHPEKCSECSYSCSSKAALRIH-ERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 84 EKKYMC 89
          +     
Sbjct: 63 DMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 61.7 bits (151), Expect = 3e-13
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 79  RTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHT 137
            + +      C  C    +  A L  H+  H   + FKCNYC      PSNL +H+K   
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 12/58 (20%), Positives = 22/58 (37%)

Query: 135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH 192
           + +      C  C     +   L+ H+  H +   F C  C+   K   +L++H K  
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 70.3 bits (173), Expect = 2e-16
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 3/88 (3%)

Query: 24  HTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNH--CGRAFSDKSNLTVHIRTH 81
            T         C K++     L  H  R H   + + C+   CG  F+    LT H R H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAH-LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 82  TDEKKYMCELCGAEFAQWATLYNHKFTH 109
           T  + + C+ C   F++   L  H   H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 68.3 bits (168), Expect = 1e-15
 Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTH 59
               CG        L+ H+  HTGE+P+ C    C   F    +L  HY R H   R  
Sbjct: 8  CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY-RKHTGHRPF 66

Query: 60 QCNHCGRAFSDKSNLTVHIRTH 81
          QC  C RAFS   +L +H++ H
Sbjct: 67 QCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 113 KFKCNYCEKVYNNPSNLQRHIKTHTDNSLYIC--EICGKDFGTARYLKRHKDTHNSVNTF 170
                 C K Y   S+L+ H++THT    Y C  + CG  F  +  L RH   H     F
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66

Query: 171 VCEVCNTGFKVKKHLTQHYKSH 192
            C+ C+  F    HL  H K H
Sbjct: 67  QCQKCDRAFSRSDHLALHMKRH 88

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 69.2 bits (170), Expect = 8e-16
 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 24  HTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNH--CGRAFSDKSNLTVHIR 79
               R H C    C+K +     L  H  R H   + ++C    C   F+    LT H R
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAH-LRTHTGEKPYKCTWEGCDWRFARSDELTRHYR 68

Query: 80  THTDEKKYMCELCGAEFAQWATLYNHKFTHND 111
            HT  K + C +C   F++   L  H   H +
Sbjct: 69  KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 66.9 bits (164), Expect = 6e-15
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 27/116 (23%)

Query: 53  HERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHN 110
            E+ R H C++  C + ++  S+L  H+RTHT EK Y C   G                 
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEG----------------- 52

Query: 111 DIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNS 166
                   C+  +     L RH + HT    + C +C + F  + +L  H   H +
Sbjct: 53  --------CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 66.9 bits (164), Expect = 7e-15
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 4   CPQCGALLKNIWSLREHIMIHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQC 61
            P C  +      L+ H+  HTGE+P+ C    C   F    +L  HY R H   +  QC
Sbjct: 20  YPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY-RKHTGAKPFQC 78

Query: 62  NHCGRAFSDKSNLTVHIRTHTD 83
             C R+FS   +L +H++ H +
Sbjct: 79  GVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 63.0 bits (154), Expect = 2e-13
 Identities = 31/101 (30%), Positives = 37/101 (36%), Gaps = 5/101 (4%)

Query: 94  AEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYIC--EICGKDF 151
                       +  H         C KVY   S+L+ H++THT    Y C  E C   F
Sbjct: 1   GSSGSSGPDLEKRRIH---YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 152 GTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH 192
             +  L RH   H     F C VCN  F    HL  H K H
Sbjct: 58  ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 67.2 bits (165), Expect = 2e-15
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 23 IHTGERPHVCHVCSKSFRNRGKLNVHYK-RVHERIRTHQCNHCGRAFSDKSNLTVHIRTH 81
             GE  + C VCS+ + +      HY       ++ + C  C + F+ K N+T H++  
Sbjct: 4  TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 82 T 82
           
Sbjct: 64 H 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 61.8 bits (151), Expect = 2e-13
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 50  KRVHERIRTHQCNHCGRAFSDKSNLTVHIRT--HTDEKKYMCELCGAEFAQWATLYNHKF 107
           +   E   T++C  C R ++  SN   H  T    + K Y C  C  EF +   +  H  
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 108 THNDI 112
             + I
Sbjct: 62  IIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 114 FKCNYCEKVYNNPSNLQRHIKT--HTDNSLYICEICGKDFGTARYLKRHKDTHNSV 167
           ++C  C +VY + SN  RH  T    +  +Y C  C K+F     +  H    + +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.2 bits (108), Expect = 3e-07
 Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 2  FKCPQCGALLKNIWSLREHIMI--HTGERPHVCHVCSKSFRNRGKLNVHYKRVHERI 56
          ++C  C  +  +I +   H +       + + C  C K F  +  +  H  ++  +I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH-VKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVNT--FVCEVCNTGFKVKKHLTQHYKSH 192
           T      Y C++C + +       RH  T +  N   + C  C   F  K ++T H K  
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 59.9 bits (146), Expect = 2e-12
 Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 28/109 (25%)

Query: 59  HQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKC 116
           + C+   CG+AF   + L VH  +HT +  Y C   G                       
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG----------------------- 38

Query: 117 NYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGT-ARYLKRHKDTH 164
             C+K ++ PS L+RH K H        + C     T   YLK   + H
Sbjct: 39  --CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 58.4 bits (142), Expect = 7e-12
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 30  HVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEK 85
           +VCH   C K+F+   +L VH +  H +   ++C H  C + FS  S L  H + H    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 86  KYMCELCGAEFAQWATLYNH 105
               + C      W     H
Sbjct: 61  CKKDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 56.5 bits (137), Expect = 4e-11
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 114 FKCNY--CEKVYNNPSNLQRHIKTHTDNSLYIC--EICGKDFGTARYLKRHKDTHNSVNT 169
           + C++  C K +   + L+ H  +HT    Y C  E C K F     LKRH+  H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 170 FVCEVCNTGFKVKKHLTQHYK 190
              + C+   K      +H  
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 55.3 bits (134), Expect = 1e-10
 Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 4  CPQCGALLKNIWSLREHIMIHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQC 61
             CG   K    L+ H   HT + P+ C    C K F    +L  H ++VH      + 
Sbjct: 6  FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVHAGYPCKKD 64

Query: 62 NHCGRAFSDKSNLTVHI-RTH 81
          + C       +    H+   H
Sbjct: 65 DSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 2/54 (3%)

Query: 2  FKCPQ--CGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVH 53
          ++CP   C         L+ H  +H G        CS   +       H    H
Sbjct: 32 YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 59.8 bits (144), Expect = 5e-12
 Identities = 20/94 (21%), Positives = 28/94 (29%), Gaps = 4/94 (4%)

Query: 16  SLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRT----HQCNHCGRAFSDK 71
           S + +  I TG     C  CS ++    +L VH                 N    +   K
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 72  SNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNH 105
            +L         +K   C  CG  F     L  H
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 56.7 bits (136), Expect = 6e-11
 Identities = 18/98 (18%), Positives = 28/98 (28%), Gaps = 6/98 (6%)

Query: 69  SDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH------NDIKFKCNYCEKV 122
           S  S+  ++    T   K+ C+ C A +     L  H          N      N     
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 123 YNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRH 160
                +L           +  C  CG  F + + L  H
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 6/86 (6%)

Query: 2   FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVH-----YKRVHERI 56
           F+C  C A    +  L  H M  TG      H    +   R            +   +  
Sbjct: 20  FRCKDCSAAYDTLVELTVH-MNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78

Query: 57  RTHQCNHCGRAFSDKSNLTVHIRTHT 82
           +  +C +CG +F    +L+VH+    
Sbjct: 79  KVLKCMYCGHSFESLQDLSVHMIKTK 104

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 58.1 bits (140), Expect = 1e-11
 Identities = 18/75 (24%), Positives = 24/75 (32%), Gaps = 8/75 (10%)

Query: 23 IHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQ--------CNHCGRAFSDKSNL 74
          I   +       C ++F    +L  H    H               C   G++F  K  L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 75 TVHIRTHTDEKKYMC 89
            HIR HT EK    
Sbjct: 79 VNHIRVHTGEKSGPS 93

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 56.3 bits (137), Expect = 2e-11
 Identities = 20/50 (40%), Positives = 27/50 (54%)

Query: 57  RTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHK 106
           R+  C  C RAF+ + +L  H R+HT+EK Y C LC   F +   L  H 
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 28 RPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHI-RTHTDEK 85
          R  VC VC+++F  +  L  H  R H   + + C  C RAF+ +  L  H  + H+   
Sbjct: 1  RSFVCEVCTRAFARQEHLKRH-YRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVH 53
          F C  C         L+ H   HT E+P+ C +C+++F  R  L  H +++H
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHK 161
           F C  C + +    +L+RH ++HT+   Y C +C + F     L RH 
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 15/49 (30%), Positives = 27/49 (55%)

Query: 142 YICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYK 190
           ++CE+C + F    +LKRH  +H +   + C +CN  F  +  L +H +
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 55.7 bits (135), Expect = 3e-11
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 23 IHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSD 70
            +  +P++C  C K F     LN H K+VH   R H+C       S 
Sbjct: 6  SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 42.2 bits (100), Expect = 3e-06
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 2  FKCPQCGALLKNIWSLREHI-MIHTGERPHVCHVCSKSFRN 41
          + C  CG        L  HI  +HT ERPH C V      +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 28/79 (35%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIK-T 135
              + +  K Y+C+ CG  F++                           P +L  HIK  
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSR---------------------------PDHLNGHIKQV 35

Query: 136 HTDNSLYICEICGKDFGTA 154
           HT    + C++      + 
Sbjct: 36  HTSERPHKCQVWVSGPSSG 54

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 55.4 bits (134), Expect = 8e-11
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 23 IHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRT 80
          +    RP+ C V  C + F    +L  H  R+H   +  QC  C R FS   +LT HIRT
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

Query: 81 HT 82
          HT
Sbjct: 72 HT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 47.7 bits (114), Expect = 5e-08
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 48  HYKRVHERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNH 105
           +Y     R   + C    C R FS    LT HIR HT +K + C +C   F++   L  H
Sbjct: 11  NYVVPKMR--PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68

Query: 106 KFTH 109
             TH
Sbjct: 69  IRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 127 SNLQRHIKTHTDNSLYIC--EICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKH 184
           +NL  ++        Y C  E C + F  +  L RH   H     F C +C   F    H
Sbjct: 7   NNLLNYVVPKMRP--YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64

Query: 185 LTQHYKSHS 193
           LT H ++H+
Sbjct: 65  LTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 42.3 bits (100), Expect = 5e-06
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 27/97 (27%)

Query: 68  FSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPS 127
               +NL  ++      + Y C +                           C++ ++   
Sbjct: 3   PHPMNNLLNYVVPK--MRPYACPVES-------------------------CDRRFSRSD 35

Query: 128 NLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH 164
            L RHI+ HT    + C IC ++F  + +L  H  TH
Sbjct: 36  ELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 17 LREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKR 51
          L  HI IHTG++P  C +C ++F     L  H + 
Sbjct: 37 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.4 bits (132), Expect = 8e-11
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                T    ++CN C +AF+ KSNL VH RTHT E     
Sbjct: 2  SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
               + T EK Y C  C   F   + L  H+ TH
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 3e-10
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    + CN CG+AF  KS L +H RTHT E     
Sbjct: 3  SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.9 bits (84), Expect = 5e-04
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              + T  K Y+C  CG  F   + L  H  TH
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 3e-10
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T     +C+ C +AF+ KSNL VH RTHT EK     
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 5e-04
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              + T EK + C  C   F   + L  H+ TH
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.6 bits (127), Expect = 4e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
                    + C+ CG+AFS KS L +H+RTH+ EK     
Sbjct: 3  SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              +   EK Y C  CG  F+  + L  H  TH
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 6e-10
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
                T    ++C+ CG+AFS + +L+VH R H+ +K     
Sbjct: 2  SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
               + T EK Y C +CG  F+   +L  H+  H+  K    +
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 6e-10
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                T    ++C+ CG+AFS K  L  H RTH  EK    
Sbjct: 2  SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
               + T E  Y C  CG  F++   L +H+ TH   K    +
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 52.7 bits (126), Expect = 7e-10
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 8/72 (11%)

Query: 16 SLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLT 75
          S  +   IH G+R   C  C   F  R  L+        R +T  C  C +    ++ L 
Sbjct: 5  SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLS--------RRKTPMCEKCRKDSCQEAALN 56

Query: 76 VHIRTHTDEKKY 87
                + +K  
Sbjct: 57 KDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 44.7 bits (105), Expect = 7e-07
 Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 6/66 (9%)

Query: 72  SNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQR 131
            +     + H  ++   C  CG  F + +TL   K         C  C K     + L +
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNK 57

Query: 132 HIKTHT 137
                +
Sbjct: 58  DEGNES 63

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.0 bits (93), Expect = 3e-05
 Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 7/69 (10%)

Query: 125 NPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKH 184
           +  +  +  K H  +    C  CG  F         + T +   T +CE C      +  
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAA 54

Query: 185 LTQHYKSHS 193
           L +   + S
Sbjct: 55  LNKDEGNES 63

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 7e-10
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++CN CG+AF  +S+L +H  TH+ EK    
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C  CG  F   ++L  H+ TH+  K    +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 7e-10
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 4/43 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
                +    + CN CG+ FS KS L+ H RTHT EK     
Sbjct: 2  SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
               + + EK Y C  CG  F+Q + L  H+ TH   K    +
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 51.8 bits (125), Expect = 8e-10
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    + C+ C + FS KS L VH R+HT  K    
Sbjct: 3  SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T  K Y C  C   F+  + L  H+ +H  +K    +
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 9e-10
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
                T    ++C+ C +AFS  ++LT H R H+ EK     
Sbjct: 2  SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
               + T EK Y C++C   F+  A+L  H+  H+  K    +
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T     +C HCG++F  K NL  H R HT EK    
Sbjct: 3  SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T +K + C  CG  F     L  H+  H   K    +
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                T    ++C+ CG++F+ KS L VH + HT EK    
Sbjct: 2  SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++CN CG+AF   SNLT H   HT EK     
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C  CG  F   + L  H+  H   K    +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                T    ++C+ CG++F  KS L VH R HT E     
Sbjct: 2  SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++C  CG+AF+D+SNL  H + HT EK     
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 1e-09
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C  CG+AF  KS+L  H R+HT EK    
Sbjct: 3  SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T ++ Y C  CG  F   ++L  H+ +H   K    +
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 51.0 bits (123), Expect = 1e-09
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T     +C  CG++FS  S L  H R HT EK     
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 1e-09
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++CN CG+AFS +S+LT H   HT +K     
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C  CG  F+  ++L  H+  H   K    +
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 2e-09
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C+ CG+AF+ KS L +H ++HT E+    
Sbjct: 3  SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C  CG  F + + L+ H+ +H   +    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 2e-09
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++C  C +AF+ K++L  H +THT EK     
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C++C   F Q A L  H+ TH   K    +
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 2e-09
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    + C  CG+AF+ +SNL  H + HT +K     
Sbjct: 3  SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    + C  CG+AF+D+SNL  H + HT EK    
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 7e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T E+ Y+C +CG  F   + L  H+  H   K    +
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C+ CG+AF  KS L++H R H  EK    
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T E+ Y C  CG  F Q +TL  H+  H   K    +
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C+ CG+AF+ KS L +H R HT EK    
Sbjct: 3  SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T E+ Y C  CG  FA+ +TL  H+  H   K    +
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
            C+ C +AFS KS L VH +TH +EK    
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T     +C  CG+AF+ KS L++H + HT EK     
Sbjct: 3  SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    H+C  CG++FS  S L VH R HT E     
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 4/43 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
                T     +C+ CG++F  +S L  H   HT EK     
Sbjct: 2  SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 5e-05
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
               + T EK + C++CG  F   + L  H   H   K    +
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               +    ++CN CG+AF  KS L VH RTH        
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              + + EK Y C  CG  F   + L  H+ TH
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 3e-09
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    + CN CG+AFS  S+LT H   HT EK     
Sbjct: 3  SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T  K YMC  CG  F+ +++L  H+  H   K    +
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 4e-09
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T      C+ CG+ F+ K+NL +H + HT E+    
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.9 bits (120), Expect = 4e-09
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKY 87
                    ++C+ CG+AFS K +L VHIR HT     
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              +   EK Y C+ CG  F+Q  +L  H   H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 4e-09
 Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 5/45 (11%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCG 93
               +     +C  CG+ F   S    H R+H+ EK       G
Sbjct: 3  SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              + + EK + CE CG  F   +  Y+H+ +H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 4e-09
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C+ C ++F   S+LTVH R HT EK    
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C++C   F   ++L  H+  H   K    +
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 4e-09
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C  CG+ ++ K NL +H + HT E+    
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y CE CG  +     L  H+  H   +    +
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 4e-09
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++C  CG+AF D S+ T H R HT ++     
Sbjct: 3  SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C  CG  F   ++   H+  H   +    +
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 5e-09
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C  CG+AF+ K+NLT H R HT EK    
Sbjct: 3  SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C  CG  FAQ A L  H+  H   K    +
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 5e-09
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    + C  CG+AF   S L  H R HT EK     
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y CE CG  F   + L  H+  H   K    +
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 50.1 bits (120), Expect = 6e-09
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)

Query: 50  KRVHERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMC--ELCGAEFAQWATLYNH 105
           +    RIR+H C+H  CG+ +   S+L  H RTHT EK + C  + C   FA+   L  H
Sbjct: 9   QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH 68

Query: 106 KFTH 109
           + TH
Sbjct: 69  RRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 50.1 bits (120), Expect = 7e-09
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 16 SLREHIMIHTGERPHVCHV--CSKSFRNRGKLNVHYKRVHERIRTHQCNH--CGRAFSDK 71
                +  +  R H+C    C K++     L  H  R H   +   C+   C R F+  
Sbjct: 4  GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAH-TRTHTGEKPFSCSWKGCERRFARS 62

Query: 72 SNLTVHIRTH 81
            L+ H RTH
Sbjct: 63 DELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 41.6 bits (98), Expect = 8e-06
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 100 ATLYNHKFTHNDIK-FKCNY--CEKVYNNPSNLQRHIKTHTDNSLYIC--EICGKDFGTA 154
           +     +   + I+   C++  C K Y   S+L+ H +THT    + C  + C + F  +
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 155 RYLKRHKDTH 164
             L RH+ TH
Sbjct: 63  DELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 127 SNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVNTFVCEV--CNTGFKVK 182
           S         +    +IC    CGK +  + +LK H  TH     F C    C   F   
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 183 KHLTQHYKSH 192
             L++H ++H
Sbjct: 63  DELSRHRRTH 72

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 7e-09
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++C  CG+ F  + +L  H   HT EK     
Sbjct: 3  SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y CE CG  F     LY H   H   K    +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 7e-09
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                     +CN C + F+  S+LTVH R HT EK    
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 7e-09
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
           +C  CG+AF  KS L +H RTH D+K    
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 7e-09
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C+ CG++F+ KS L +H + HT E+    
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 9e-04
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C  CG  F   + L  H+  H   +    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 49.1 bits (118), Expect = 8e-09
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T     +C  CG+ FS +S L VH + HT EK    
Sbjct: 3  SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 8e-09
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               +    ++C  CG+ ++ + NL +H R H  EK    
Sbjct: 3  SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 7e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              + + EK Y CE CG  + +   L  H+  H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 8e-09
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++CN CG+AFS  S L  H R HT EK     
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C  CG  F+Q + L  H+  H   K    +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 8e-09
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    + C  CG++FS    L  H R H+ EK    
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C+ CG  F++   L  H+  H+  K    +
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 8e-09
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    + CN CG++F  KS+L  H R HT EK     
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y+C  CG  F Q + L  H+  H   K    +
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 18/71 (25%), Positives = 20/71 (28%), Gaps = 29/71 (40%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR 79
               TGE+P                               C  CG+AFSD   L  H R
Sbjct: 3  SGSSGTGEKP-----------------------------FDCIDCGKAFSDHIGLNQHRR 33

Query: 80 THTDEKKYMCE 90
           HT EK     
Sbjct: 34 IHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              + T EK + C  CG  F+    L  H+  H
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 4/43 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
                T    ++CN CG+ F+  S+L  H   HT EK     
Sbjct: 2  SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 4e-04
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
               + T +K Y C  CG  F Q + L  H+  H   K    +
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               +    ++C  CG+ +  + +L  H R HT EK    
Sbjct: 3  SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
          ++C+ CG+AF+ K  L  H RTH  E     
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++CN CG+ F   S L+ H R HT EK     
Sbjct: 3  SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C  CG  F   + L  H+  H   K    +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 1e-08
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               +     +C  CG+AF    +L  H+R HT EK     
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++CN CG+ FS  S L+ H + HT EK     
Sbjct: 3  SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK+Y C  CG  F++ + L  H+  H   K    +
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 52 VHERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                     ++C+ CG+ FS  S+L  H R HT EK    
Sbjct: 2  SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 76  VHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
               +   EK Y C++CG EF+Q + L  H+  H   K    +
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C  CG+AFS  ++L  H R HT EK    
Sbjct: 3  SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++CN CG+ F+  S+L  H R HT  K     
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 49.5 bits (117), Expect = 2e-08
 Identities = 17/90 (18%), Positives = 27/90 (30%), Gaps = 3/90 (3%)

Query: 57  RTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKC 116
             +QC  C    S       H R        +C  C   F        H+      K  C
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTC 72

Query: 117 NYCEKVYNNPSNLQRHIKT-HTDNSLYICE 145
             C + + +  ++ RH    H  N++    
Sbjct: 73  LECMRTFKSSFSIWRHQVEVHNQNNMAPTS 102

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.4 bits (109), Expect = 4e-07
 Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 3/87 (3%)

Query: 105 HKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH 164
                N   ++C  C    ++      H +     +  +C  C   F +    + H+   
Sbjct: 8   ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKC 65

Query: 165 NSVNTFVCEVCNTGFKVKKHLTQHYKS 191
                  C  C   FK    + +H   
Sbjct: 66  E-YKKLTCLECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 3/97 (3%)

Query: 83  DEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLY 142
           +++ Y C LC A+ +      +H+    +    C YC   + +P   Q H ++  +    
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH-ESKCEYKKL 70

Query: 143 ICEICGKDFGTARYLKRHKDT-HNSVNTFVCEVCNTG 178
            C  C + F ++  + RH+   HN  N       ++G
Sbjct: 71  TCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSGPSSG 107

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.0 bits (95), Expect = 3e-05
 Identities = 13/83 (15%), Positives = 27/83 (32%), Gaps = 4/83 (4%)

Query: 26  GERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEK 85
            +  + C +C+    +  +   H +          C +C   F        H  +  + K
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNAA---VCPYCSLRFFSPELKQEH-ESKCEYK 68

Query: 86  KYMCELCGAEFAQWATLYNHKFT 108
           K  C  C   F    +++ H+  
Sbjct: 69  KLTCLECMRTFKSSFSIWRHQVE 91

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               +    ++CN CG+ F+  S+LT H R HT EK    
Sbjct: 3  SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++CN CG+ F+  S+L  H   HT EK     
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C  CG+ FS K  L  H +TH+ +     
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    + CN CG+AF   ++L  H+R HT E      
Sbjct: 3  SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T     +C  CG++++ + +LT H R HT EK    
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 19/71 (26%), Positives = 22/71 (30%), Gaps = 29/71 (40%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR 79
               TG +P                             +QCN CG+AFS  S L  H R
Sbjct: 3  SGSSGTGGKP-----------------------------YQCNECGKAFSQTSKLARHQR 33

Query: 80 THTDEKKYMCE 90
           HT EK     
Sbjct: 34 VHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T  K Y C  CG  F+Q + L  H+  H   K    +
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++CN CG+ F+  S+L  H   HT EK     
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 3e-08
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++C+ CG+ F   S+L  H   HT EK     
Sbjct: 3  SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.8 bits (113), Expect = 3e-08
 Identities = 18/51 (35%), Positives = 21/51 (41%)

Query: 59  HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
           + C  CG      S L  HIRTHTD + Y C  C   F     L  H  + 
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.4 bits (112), Expect = 4e-08
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 30 HVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKK 86
          ++C  C    +    L  H  R H  +R + C +C  +F  K NLT H+++    KK
Sbjct: 2  YICEECGIRXKKPSMLKKH-IRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.4 bits (99), Expect = 3e-06
 Identities = 19/52 (36%), Positives = 25/52 (48%)

Query: 113 KFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH 164
           K+ C  C      PS L++HI+THTD   Y C  C   F T   L +H  + 
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.0 bits (98), Expect = 5e-06
 Identities = 23/52 (44%), Positives = 28/52 (53%)

Query: 142 YICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHS 193
           YICE CG        LK+H  TH  V  + C  CN  FK K +LT+H KS +
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.5 bits (94), Expect = 1e-05
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 86  KYMCELCGAEFAQWATLYNHKFTHNDIK-FKCNYCEKVYNNPSNLQRHIKTHT 137
           KY+CE CG    + + L  H  TH D++ + C YC   +    NL +H+K+  
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    ++CN CG+ F+  S+L  H R HT  K     
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 29/70 (41%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR 79
               +GE+P                             + C++CG+AF   + L  H R
Sbjct: 3  SGSSGSGEKP-----------------------------YVCDYCGKAFGLSAELVRHQR 33

Query: 80 THTDEKKYMC 89
           HT EK    
Sbjct: 34 IHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + + EK Y+C+ CG  F   A L  H+  H   K    +
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 4e-08
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               +     +C  CG+ F+  S L  H R HT EK    
Sbjct: 3  SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + + EK + CE CG  F Q + L++H+  H   K    +
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 47.2 bits (113), Expect = 4e-08
 Identities = 15/71 (21%), Positives = 20/71 (28%), Gaps = 29/71 (40%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR 79
               TGE+P                             + C  CG++F   S L  H R
Sbjct: 3  SGSSGTGEKP-----------------------------YNCKECGKSFRWASCLLKHQR 33

Query: 80 THTDEKKYMCE 90
           H+ EK     
Sbjct: 34 VHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C+ CG  F   + L  H+  H+  K    +
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.1 bits (113), Expect = 5e-08
 Identities = 14/40 (35%), Positives = 17/40 (42%)

Query: 50 KRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                 R H+C+ CG+ F   SN   H R HT EK    
Sbjct: 4  GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 5e-08
 Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 4/41 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
               T    ++C  CG+AF   S+L  H   H+ E+    
Sbjct: 3  SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + T EK Y C++CG  F   + L  H   H+  +    +
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 5e-08
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               T    H+CN CG++F   ++L  H R HT EK     
Sbjct: 3  SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 6e-08
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               +    ++C+ CG+AF   ++L  H R HT  +     
Sbjct: 3  SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 7e-04
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + + EK Y C  CG  F +   L  H+  H   +    +
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 7e-08
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
          ++C+ C ++FS K  L VH R HT EK    
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 8e-08
 Identities = 17/70 (24%), Positives = 22/70 (31%), Gaps = 29/70 (41%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR 79
                GE+P                             +QC+ CG++FS    LT H  
Sbjct: 3  SGSSGEGEKP-----------------------------YQCSECGKSFSGSYRLTQHWI 33

Query: 80 THTDEKKYMC 89
          THT EK    
Sbjct: 34 THTREKPSGP 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 46.5 bits (110), Expect = 8e-08
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 57 RTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELC 92
          +   C  CG+ F D  +L  H  +H+ EK Y     
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCS 36
            C  CG + ++++ L  H + H+GE+P+     S
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 8e-08
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
          HQC+ CGR F+ KS+L  H R HT EK    
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.7 bits (109), Expect = 1e-07
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 49 YKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                  +  QC  CG  FS   +L  H+R+H        
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              + T EK + C+ CG  F+   +L+ H  +H
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKY 87
          ++C  CG++F  K +LT+H R HT     
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 16/71 (22%), Positives = 21/71 (29%), Gaps = 29/71 (40%)

Query: 19 EHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHI 78
                +GE+P                              QC  CG+ F+  S+L  H 
Sbjct: 2  SSGSSGSGEKP-----------------------------FQCEECGKRFTQNSHLHSHQ 32

Query: 79 RTHTDEKKYMC 89
          R HT EK    
Sbjct: 33 RVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 6e-04
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIK-FKCN 117
              + + EK + CE CG  F Q + L++H+  H   K    +
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.7 bits (109), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 4/42 (9%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCE 90
               +    H C+ CG+ F   S L +H R H  EK     
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 2e-07
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 50 KRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                 R + CN CG+ F   S+L  H++ H  EK    
Sbjct: 4  GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 49 YKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
                  +T +C  C   FS  S+L +H   H  EK    
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKY 87
          + C  CG++F+ + +L VH R+ +     
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 3e-07
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 29/70 (41%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR 79
               +GERP                   +K          CN CG+ F  +S+L  H+R
Sbjct: 3  SGSSGSGERP-------------------FK----------CNECGKGFGRRSHLAGHLR 33

Query: 80 THTDEKKYMC 89
           H+ EK    
Sbjct: 34 LHSREKSSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 44.4 bits (106), Expect = 3e-07
 Identities = 9/37 (24%), Positives = 11/37 (29%), Gaps = 6/37 (16%)

Query: 57 RTH------QCNHCGRAFSDKSNLTVHIRTHTDEKKY 87
           +        C  CG  F     L  H+R HT     
Sbjct: 4  GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              +   EK Y CE+CG  F    TL +H   H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 2  FKCPQCGALLKNIWSLREHIMIHTGERPH 30
          + C  CG   +++ +L+ H+ IHTG  P 
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.5 bits (106), Expect = 4e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 5/42 (11%)

Query: 53 HERIRT----HQCNHCGRAFSDKSNLTVHIR-THTDEKKYMC 89
               T    ++C  CG+AF   ++L  H R  HT EK    
Sbjct: 3  SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 44.4 bits (106), Expect = 4e-07
 Identities = 13/68 (19%), Positives = 17/68 (25%), Gaps = 29/68 (42%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR 79
                GE+P                   YK          C  CG  F   ++L  H+ 
Sbjct: 2  SSGSSGGEKP-------------------YK----------CETCGARFVQVAHLRAHVL 32

Query: 80 THTDEKKY 87
           HT     
Sbjct: 33 IHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 14/33 (42%), Positives = 15/33 (45%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
              +   EK Y CE CGA F Q A L  H   H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 5e-07
 Identities = 11/71 (15%), Positives = 19/71 (26%), Gaps = 29/71 (40%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR 79
               +G++P                             ++C  C + F    +L  H R
Sbjct: 3  SGSSGSGKKP-----------------------------YECKECRKTFIQIGHLNQHKR 33

Query: 80 THTDEKKYMCE 90
           HT E+     
Sbjct: 34 VHTGERSSGPS 44

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 43.8 bits (104), Expect = 7e-07
 Identities = 14/71 (19%), Positives = 18/71 (25%), Gaps = 27/71 (38%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIR 79
               TGE+P  C                               CG  FS    L+ H R
Sbjct: 3  SGSSGTGEKPFACTW---------------------------PGCGWRFSRSDELSRHRR 35

Query: 80 THTDEKKYMCE 90
          +H+  K     
Sbjct: 36 SHSGVKPSGPS 46

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 12/71 (16%), Positives = 19/71 (26%), Gaps = 29/71 (40%)

Query: 19 EHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHI 78
                T  +                              + CN CG+AF+   +LT H 
Sbjct: 2  SSGSSGTDSKS-----------------------------YNCNECGKAFTRIFHLTRHQ 32

Query: 79 RTHTDEKKYMC 89
          + HT +     
Sbjct: 33 KIHTRKSGPSS 43

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 44.8 bits (105), Expect = 1e-05
 Identities = 6/36 (16%), Positives = 11/36 (30%)

Query: 50  KRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEK 85
                    +QC+ C        +L  H+ +H    
Sbjct: 172 PPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHG 207

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 3/105 (2%)

Query: 32  CHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCEL 91
            HV  +  +   +L    KR+   I             D+S+    +       +++C L
Sbjct: 22  IHVTLEELKRYHQLTPEQKRLIRAIVKTLI--HNPQLLDESSYLYRLLASKAISQFVCPL 79

Query: 92  CGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTH 136
           C   F+   +L  H       K  C  C+K + +  +   H+   
Sbjct: 80  CLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHVCKK 123

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMC 89
          + C  C   FSD + L  H + HT +     
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.8 bits (85), Expect = 2e-04
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 60 QCNHCGRAFSDKSNLTVHIRTHTDEK 85
          +C+ C R F+ ++ L  H RTH  + 
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHARKS 39

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 57 RTHQCNHCGRAFSDKSNLTVHIRTHTDEK 85
          R+  C  C RAF+ + +L  H R+HT+EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens} Length = 30

 Score = 36.3 bits (83), Expect = 3e-04
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 56 IRTHQCNHCGRAFSDKSNLTVHIRTHTDEK 85
          ++ + C HC R F+D   L  H+R HT EK
Sbjct: 1  MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 54 ERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEK 85
           + + H C+   CG+ +   S+L  H+R HT E+
Sbjct: 4  GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	220
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.96
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.93
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.93
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.88
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.87
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.86
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.86
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.83
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.81
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.81
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.79
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.75
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.75
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.71
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.71
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.71
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.69
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.69
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.68
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.67
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.67
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.66
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.65
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.65
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.65
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.64
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.63
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.63
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.63
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.62
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.62
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.61
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.61
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.61
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.6
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.6
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.58
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.55
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.55
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.54
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.54
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.52
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.52
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.51
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.5
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.49
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.47
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.47
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.46
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.45
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.42
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.38
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.38
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.35
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.35
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.35
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.34
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.34
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.34
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.33
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.33
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.32
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.32
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.29
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.28
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.27
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.27
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.26
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.25
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.24
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.24
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.24
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.23
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.23
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.23
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.22
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.21
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.21
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.21
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.21
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.21
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.2
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.19
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.19
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.18
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.17
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.16
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.15
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.12
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.11
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.1
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.1
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.03
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.01
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.98
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.94
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.92
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.9
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.9
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.89
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.88
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.87
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.83
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.82
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.81
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.79
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.77
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.74
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.73
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.73
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.65
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.62
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.62
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.6
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.54
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.53
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.52
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.52
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.5
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.5
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.49
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.48
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.48
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.46
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.45
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.44
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.44
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.43
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.43
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.41
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.4
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.4
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.77
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.4
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.38
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.73
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.37
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.36
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.36
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.35
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.34
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.34
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.33
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.33
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.31
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.29
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.29
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.29
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.27
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.57
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.53
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.53
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.22
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.13
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.39
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.08
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.98
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.74
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.56
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.11
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.87
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.86
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.77
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.33
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.27
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.16
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.88
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.67
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.08
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.63
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	89.65
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	89.34
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	87.49
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	86.92
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	86.77
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	86.16
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	85.33
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	83.88
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	82.67
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	81.18

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=9.8e-43  Score=250.86  Aligned_cols=184  Identities=35%  Similarity=0.659  Sum_probs=147.2

Q ss_pred             HHHHHHHHHHhhCCCCcccccchhhcCChhHHHHHHhhhcCCCCcccccccccccCChhHHHHHHhhcCCCCcccCchhh
Q psy11591         14 IWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCG   93 (220)
Q Consensus        14 ~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~   93 (220)
                      ...|..|+..+.++++|.|+.|++.|.+...|..|+ ..|.++++|.|+.|++.|.+...|..|+..|+++++|.|+.|+
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   84 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECG   84 (190)
T ss_dssp             -------------------------CCSSHHHHHGG-GCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHH-HHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccC
Confidence            356888999999999999999999999999999997 6788999999999999999999999999999999999999999


Q ss_pred             hhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591         94 AEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus        94 ~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      +.|.....|..|+..| ++++|.|+.|++.|.+...|..|++.|+++++|.|++|++.|.+.+.|..|+++|+++++|.|
T Consensus        85 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  164 (190)
T 2i13_A           85 KSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC  164 (190)
T ss_dssp             CEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEEC
T ss_pred             CccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeEC
Confidence            9999999999999999 788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCchhHHHHHhhhcccccCC
Q psy11591        173 EVCNTGFKVKKHLTQHYKSHSMFIPP  198 (220)
Q Consensus       173 ~~C~~~f~~~~~l~~H~~~h~~~~~~  198 (220)
                      ++|++.|.+...|..|+++|+|++||
T Consensus       165 ~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          165 PECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             TTTCCEESSHHHHHHHHTTC------
T ss_pred             CCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.1e-39  Score=233.47  Aligned_cols=169  Identities=40%  Similarity=0.750  Sum_probs=146.7

Q ss_pred             CCCCccchhhhcCHHHHHHHHHHhhCCCCcccccchhhcCChhHHHHHHhhhcCCCCcccccccccccCChhHHHHHHhh
Q psy11591          1 MFKCPQCGALLKNIWSLREHIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRT   80 (220)
Q Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h~~~   80 (220)
                      ||.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+ ..|.++++|.|+.|++.|.+...|..|+..
T Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           21 PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             ----------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccCcccCCccCCHHHHHHHHHh
Confidence            5899999999999999999999999999999999999999999999998 678888999999999999999999999999


Q ss_pred             cCCCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHH
Q psy11591         81 HTDEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKR  159 (220)
Q Consensus        81 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  159 (220)
                      |+++++|.|+.|++.|.....|..|++.| ++++|.|+.|++.|.+...|..|+++|+++++|.|++|++.|.+...|..
T Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~  179 (190)
T 2i13_A          100 HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV  179 (190)
T ss_dssp             HHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHH
Confidence            99999999999999999999999999999 78999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCcc
Q psy11591        160 HKDTHNSVNTF  170 (220)
Q Consensus       160 H~~~h~~~~~~  170 (220)
                      |+++|+|++||
T Consensus       180 H~~~H~~~k~~  190 (190)
T 2i13_A          180 HQRTHTGKKTS  190 (190)
T ss_dssp             HHTTC------
T ss_pred             HHHhcCCCCCC
Confidence            99999999886

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=5.9e-35  Score=210.18  Aligned_cols=167  Identities=26%  Similarity=0.482  Sum_probs=150.6

Q ss_pred             hCCCCccc--ccchhhcCChhHHHHHHhhhcCCCCcccc--cccccccCChhHHHHHHhhcCCCCcccCc--hhhhhcCC
Q psy11591         25 TGERPHVC--HVCSKSFRNRGKLNVHYKRVHERIRTHQC--NHCGRAFSDKSNLTVHIRTHTDEKKYMCE--LCGAEFAQ   98 (220)
Q Consensus        25 ~~~~~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~C--~~C~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~f~~   98 (220)
                      ...++|.|  +.|++.|.+...|..|+ ..|.++++|.|  +.|++.|.+...|..|++.|+++++|.|+  .|++.|..
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            45678999  68999999999999997 66888889999  78999999999999999999999999999  89999999


Q ss_pred             HHHHHhHH-HHh--CCcceec--CcCccccCChhhHHHHHhhhcCCCceeCCc--cccccCCHHHHHHHHHHcCCCCccc
Q psy11591         99 WATLYNHK-FTH--NDIKFKC--NYCEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVNTFV  171 (220)
Q Consensus        99 ~~~l~~h~-~~~--~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~  171 (220)
                      ...|..|+ ..|  +..+|.|  +.|++.|.+.+.|..|+++|+++++|.|++  |++.|.+.+.|..|+++|++   |.
T Consensus        87 ~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~  163 (190)
T 1tf6_A           87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YP  163 (190)
T ss_dssp             HHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CC
T ss_pred             HHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---Cc
Confidence            99999998 566  4678999  889999999999999999999999999988  99999999999999999998   89


Q ss_pred             ccc---cccccCchhHHHHHhhhcccc
Q psy11591        172 CEV---CNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       172 C~~---C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      |..   |++.|.+...|..|+++|+++
T Consensus       164 C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          164 CKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             CCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            999   999999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=3e-33  Score=201.25  Aligned_cols=163  Identities=32%  Similarity=0.663  Sum_probs=152.3

Q ss_pred             CCCC--ccchhhhcCHHHHHHHHHHhhCCCCccc--ccchhhcCChhHHHHHHhhhcCCCCccccc--ccccccCChhHH
Q psy11591          1 MFKC--PQCGALLKNIWSLREHIMIHTGERPHVC--HVCSKSFRNRGKLNVHYKRVHERIRTHQCN--HCGRAFSDKSNL   74 (220)
Q Consensus         1 ~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~--~C~~~~~~~~~l   74 (220)
                      +|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|.+...|..|+ ..|.++++|.|+  .|++.|.+...|
T Consensus        12 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           12 RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             ceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCCCCccCCHHHH
Confidence            5889  7899999999999999999999999999  88999999999999998 678999999999  899999999999


Q ss_pred             HHHH-hhc-CCCCcccC--chhhhhcCCHHHHHhHHHHh-CCcceecCc--CccccCChhhHHHHHhhhcCCCceeCCc-
Q psy11591         75 TVHI-RTH-TDEKKYMC--ELCGAEFAQWATLYNHKFTH-NDIKFKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICEI-  146 (220)
Q Consensus        75 ~~h~-~~~-~~~~~~~C--~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~-  146 (220)
                      ..|+ ..| .++++|.|  +.|++.|.....|..|++.| +++||.|+.  |++.|.+.+.|..|+++|++   |.|+. 
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~  167 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKD  167 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCST
T ss_pred             HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCC
Confidence            9999 555 46789999  99999999999999999999 788999988  99999999999999999988   99999 


Q ss_pred             --cccccCCHHHHHHHHHHcCCC
Q psy11591        147 --CGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       147 --C~~~f~~~~~l~~H~~~h~~~  167 (220)
                        |++.|.....|..|+++|+++
T Consensus       168 ~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          168 DSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             TTCCCCCSCHHHHHHHHTTCC--
T ss_pred             CcCCCccccHHHHHHHHHhhcCC
Confidence              999999999999999999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.97  E-value=3.1e-30  Score=179.57  Aligned_cols=143  Identities=27%  Similarity=0.547  Sum_probs=109.5

Q ss_pred             CcccccchhhcCChhHHHHHHhh--hcCCCCcccccccccccCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHH
Q psy11591         29 PHVCHVCSKSFRNRGKLNVHYKR--VHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHK  106 (220)
Q Consensus        29 ~~~C~~C~~~~~~~~~l~~H~~~--~h~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~  106 (220)
                      ++.|+.|++.|.+...|..|++.  .|.++++|.|+.|+                       |..|++.|.....|..|+
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~-----------------------C~~c~~~f~~~~~l~~H~   59 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG-----------------------CSRELRPFKAQYMLVVHM   59 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT-----------------------CTTTTCCCSSHHHHHHHT
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC-----------------------ccchhhhhhhHHHHHHHH
Confidence            45566666666666666666532  34555555555442                       445567777777777777


Q ss_pred             HHh-CCcceecCc--CccccCChhhHHHHHhhhcCCCceeCCc--cccccCCHHHHHHHH-HHcCCCCcccccc--cccc
Q psy11591        107 FTH-NDIKFKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKRHK-DTHNSVNTFVCEV--CNTG  178 (220)
Q Consensus       107 ~~~-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~  178 (220)
                      +.| ++++|.|++  |++.|.+...|..|+++|+++++|.|++  |++.|.+.+.|..|+ ++|.++++|.|++  |++.
T Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~  139 (155)
T 2gli_A           60 RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKR  139 (155)
T ss_dssp             HHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCE
T ss_pred             HhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccc
Confidence            777 667788874  8888888888999998888888999988  999999999999998 7888888999988  9999


Q ss_pred             cCchhHHHHHhhhccc
Q psy11591        179 FKVKKHLTQHYKSHSM  194 (220)
Q Consensus       179 f~~~~~l~~H~~~h~~  194 (220)
                      |.+...|..|+++|+|
T Consensus       140 f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          140 YTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             ESSHHHHHHHHHHSCC
T ss_pred             cCCHHHHHHHHHhhcC
Confidence            9999999999988875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.96  E-value=3e-29  Score=174.54  Aligned_cols=142  Identities=28%  Similarity=0.583  Sum_probs=117.6

Q ss_pred             CCCCccchhhhcCHHHHHHHHH---HhhCCCCcccccchhhcCChhHHHHHHhhhcCCCCcccccccccccCChhHHHHH
Q psy11591          1 MFKCPQCGALLKNIWSLREHIM---IHTGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVH   77 (220)
Q Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~---~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~h   77 (220)
                      +|.|+.|++.|.+...|..|++   .|.++++|.|..|+                        |..|++.|.+...|..|
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~------------------------C~~c~~~f~~~~~l~~H   58 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG------------------------CSRELRPFKAQYMLVVH   58 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT------------------------CTTTTCCCSSHHHHHHH
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC------------------------ccchhhhhhhHHHHHHH
Confidence            5899999999999999999998   67888999998763                        66666666666667777


Q ss_pred             HhhcCCCCcccCch--hhhhcCCHHHHHhHHHHh-CCcceecCc--CccccCChhhHHHHH-hhhcCCCceeCCc--ccc
Q psy11591         78 IRTHTDEKKYMCEL--CGAEFAQWATLYNHKFTH-NDIKFKCNY--CEKVYNNPSNLQRHI-KTHTDNSLYICEI--CGK  149 (220)
Q Consensus        78 ~~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~~-~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~  149 (220)
                      ++.|+++++|.|+.  |++.|.....|..|++.| ++++|.|++  |++.|.+.+.|..|+ +.|.++++|.|++  |++
T Consensus        59 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~  138 (155)
T 2gli_A           59 MRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTK  138 (155)
T ss_dssp             THHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCC
T ss_pred             HHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCcc
Confidence            66677777777763  777777777777777777 567788887  999999999999998 7899999999988  999


Q ss_pred             ccCCHHHHHHHHHHcCC
Q psy11591        150 DFGTARYLKRHKDTHNS  166 (220)
Q Consensus       150 ~f~~~~~l~~H~~~h~~  166 (220)
                      .|.+.+.|..|+++|+|
T Consensus       139 ~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          139 RYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             EESSHHHHHHHHHHSCC
T ss_pred             ccCCHHHHHHHHHhhcC
Confidence            99999999999998875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.94  E-value=7.4e-27  Score=156.43  Aligned_cols=116  Identities=27%  Similarity=0.510  Sum_probs=101.1

Q ss_pred             CCcccCc--hhhhhcCCHHHHHhHHHHhCCcceecCcCccccCChhhHHHHHhhhcCCCceeCCc--cccccCCHHHHHH
Q psy11591         84 EKKYMCE--LCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKR  159 (220)
Q Consensus        84 ~~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~  159 (220)
                      +++|.|+  .|++.|.+...|..|++.|+.++|.|..|++.|.+...|..|++.|+++++|.|++  |++.|.....|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            5678888  88888988888889988888889999999999999999999999999999999986  9999999999999


Q ss_pred             HHHHcCCCCccccc--ccccccCchhHHHHHhhhcccccCCC
Q psy11591        160 HKDTHNSVNTFVCE--VCNTGFKVKKHLTQHYKSHSMFIPPE  199 (220)
Q Consensus       160 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~  199 (220)
                      |+++|+++++|.|+  .|++.|.+...|..|+++|+++++++
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            99999999999996  59999999999999999999988753

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=7.7e-26  Score=151.38  Aligned_cols=112  Identities=26%  Similarity=0.493  Sum_probs=85.2

Q ss_pred             CCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhh---hcCCCceeCCccccccCCHHHHH
Q psy11591         83 DEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKT---HTDNSLYICEICGKDFGTARYLK  158 (220)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~  158 (220)
                      ++++|.|+.|++.|.....|..|++.| ++++|.|+.|++.|.+...|..|+..   +.++++|.|++|++.|.....|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            456666666666666666666666666 45667777777777777777777774   46777888888888888888888


Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhh-ccc
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKS-HSM  194 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~  194 (220)
                      .|+++|+++++|.|++|++.|.+...|..|++. |.+
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            888888888888888888888888888888864 544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.93  E-value=4.9e-26  Score=151.29  Aligned_cols=111  Identities=26%  Similarity=0.661  Sum_probs=96.0

Q ss_pred             CCCCcccCch--hhhhcCCHHHHHhHHHHh-CCcceecC--cCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHH
Q psy11591         82 TDEKKYMCEL--CGAEFAQWATLYNHKFTH-NDIKFKCN--YCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARY  156 (220)
Q Consensus        82 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~~-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  156 (220)
                      .++++|.|..  |++.|.....|..|++.| ++++|.|+  .|++.|.+...|..|++.|+++++|.|+.|++.|.....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4567777875  888888888888887777 67788888  699999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcccc--cccccccCchhHHHHHhhhc
Q psy11591        157 LKRHKDTHNSVNTFVC--EVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       157 l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  192 (220)
                      |..|+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999  78999999999999998876

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.93  E-value=4.9e-26  Score=158.27  Aligned_cols=117  Identities=26%  Similarity=0.407  Sum_probs=97.1

Q ss_pred             CcccCchhhhhcCCHHHHHhHHHH-hCC---------cceecCcCccccCChhhHHHHHhhhcCCCceeCCc--cccccC
Q psy11591         85 KKYMCELCGAEFAQWATLYNHKFT-HND---------IKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFG  152 (220)
Q Consensus        85 ~~~~C~~C~~~f~~~~~l~~h~~~-~~~---------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~  152 (220)
                      .+|.|..|++.|.....|..|++. |..         ..|.|..|++.|.+...|..|++.|+++++|.|++  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            344444445445444444444443 311         12789999999999999999999999999999998  999999


Q ss_pred             CHHHHHHHHHHcCCCCcccccc--cccccCchhHHHHHhhhcccccCCCCC
Q psy11591        153 TARYLKRHKDTHNSVNTFVCEV--CNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       153 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                      ....|..|+++|+++++|.|.+  |++.|.+...|..|+++|++++||.|+
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999999999999999999997  999999999999999999999999875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.93  E-value=1.2e-26  Score=156.47  Aligned_cols=102  Identities=25%  Similarity=0.478  Sum_probs=72.1

Q ss_pred             hhcCCCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHH
Q psy11591         79 RTHTDEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYL  157 (220)
Q Consensus        79 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  157 (220)
                      .++.|+++|.|++|+++|.....|..|+++| +++||.|++|++.|.+.+.|..|+++|++++||.|++|++.|...+.|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            3455666666666666666666666666666 566677777777777777777777777777777777777777777777


Q ss_pred             HHHHHHcCCCC------cccccccccccC
Q psy11591        158 KRHKDTHNSVN------TFVCEVCNTGFK  180 (220)
Q Consensus       158 ~~H~~~h~~~~------~~~C~~C~~~f~  180 (220)
                      ..|+++|++++      +|.|..|++.|.
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            77777776543      477778877664

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=1.3e-24  Score=145.33  Aligned_cols=114  Identities=27%  Similarity=0.562  Sum_probs=97.0

Q ss_pred             CCCCcccccccccccCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHHHHh----CCcceecCcCccccCChhhH
Q psy11591         54 ERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH----NDIKFKCNYCEKVYNNPSNL  129 (220)
Q Consensus        54 ~~~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~----~~~~~~C~~C~~~f~~~~~l  129 (220)
                      +++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.....|..|+..+    ++.+|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            35667888888888888888888888888888888888888888888888887753    57789999999999999999


Q ss_pred             HHHHhhhcCCCceeCCccccccCCHHHHHHHHHH-cCCC
Q psy11591        130 QRHIKTHTDNSLYICEICGKDFGTARYLKRHKDT-HNSV  167 (220)
Q Consensus       130 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~  167 (220)
                      ..|+++|+++++|.|++|++.|.+...|..|++. |.++
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            9999999999999999999999999999999975 5543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=1.2e-24  Score=144.57  Aligned_cols=111  Identities=31%  Similarity=0.653  Sum_probs=94.7

Q ss_pred             CCCCcccccc--cccccCChhHHHHHHhhcCCCCcccCc--hhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhh
Q psy11591         54 ERIRTHQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCE--LCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSN  128 (220)
Q Consensus        54 ~~~~~~~C~~--C~~~~~~~~~l~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~  128 (220)
                      +++++|.|+.  |++.|.+...|..|++.|.++++|.|+  .|++.|.....|..|++.| ++++|.|++|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            3567788876  888888888888888888888888887  6888888888888888887 6778999999999999999


Q ss_pred             HHHHHhhhcCCCceeC--CccccccCCHHHHHHHHHHc
Q psy11591        129 LQRHIKTHTDNSLYIC--EICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       129 l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  164 (220)
                      |..|+++|+++++|.|  +.|++.|.+.+.|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999  78999999999999998875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=7.2e-25  Score=152.35  Aligned_cols=119  Identities=27%  Similarity=0.500  Sum_probs=100.6

Q ss_pred             CCCcccccccccccCChhHHHHHHhh-cCCCCc--------ccCchhhhhcCCHHHHHhHHHHh-CCcceecCc--Cccc
Q psy11591         55 RIRTHQCNHCGRAFSDKSNLTVHIRT-HTDEKK--------YMCELCGAEFAQWATLYNHKFTH-NDIKFKCNY--CEKV  122 (220)
Q Consensus        55 ~~~~~~C~~C~~~~~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~--C~~~  122 (220)
                      ....|.|+.|++.|.+...|..|++. |.+..+        |.|..|++.|.....|..|++.| ++++|.|..  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            34556677777777777777777665 444433        78999999999999999998888 778899988  9999


Q ss_pred             cCChhhHHHHHhhhcCCCceeCCc--cccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        123 YNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       123 f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |.+...|..|+++|+++++|.|++  |++.|.+...|..|+++|+++++|.|+
T Consensus       102 f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999999999999997  999999999999999999999999886

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=7.8e-25  Score=147.65  Aligned_cols=102  Identities=24%  Similarity=0.447  Sum_probs=93.7

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHh
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHY  189 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  189 (220)
                      |+++|.|++|++.|.+.+.|..|+++|++++||.|++|+++|.+.+.|..|+++|++++||.|++|+++|.+...|..|+
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   98 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHI   98 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHh
Confidence            77899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCCCCCCCcccccccc
Q psy11591        190 KSHSMFIPPEQFPGLDPTSCNMSRT  214 (220)
Q Consensus       190 ~~h~~~~~~~~~~~~~~~~~~~~~~  214 (220)
                      ++|++++|+.+.   .+..|..+..
T Consensus        99 ~~hh~~~p~~~~---k~~~C~~C~k  120 (133)
T 2lt7_A           99 KSVHSQDPSGDS---KLYRLHPCRS  120 (133)
T ss_dssp             HHHTCCCTTSSS---CCEEECCCCS
T ss_pred             HHhcCCCCCCCC---CCeecCCCCc
Confidence            999999887643   3455665543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=6.8e-25  Score=146.83  Aligned_cols=115  Identities=31%  Similarity=0.654  Sum_probs=82.9

Q ss_pred             CCccccc--ccccccCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCc--CccccCChhhHH
Q psy11591         56 IRTHQCN--HCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNY--CEKVYNNPSNLQ  130 (220)
Q Consensus        56 ~~~~~C~--~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~--C~~~f~~~~~l~  130 (220)
                      +++|.|+  .|++.|.+...|..|++.| ++++|.|+.|++.|.....|..|++.| ++++|.|..  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            3456666  6777777777777776666 666777777777777777777777766 566788865  888888888888


Q ss_pred             HHHhhhcCCCceeCC--ccccccCCHHHHHHHHHHcCCCCccc
Q psy11591        131 RHIKTHTDNSLYICE--ICGKDFGTARYLKRHKDTHNSVNTFV  171 (220)
Q Consensus       131 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~  171 (220)
                      .|+++|+++++|.|+  .|++.|.+.+.|..|+++|+++++++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            888888888888885  48888888888888888888887654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.88  E-value=2.6e-22  Score=130.49  Aligned_cols=92  Identities=30%  Similarity=0.624  Sum_probs=87.0

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHh
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHY  189 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  189 (220)
                      .+++|.|.+|++.|.+...|..|++.|+++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.+...|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            45689999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccCCCCC
Q psy11591        190 KSHSMFIPPEQF  201 (220)
Q Consensus       190 ~~h~~~~~~~~~  201 (220)
                      ++|++++|+.++
T Consensus        94 ~~H~~~~~~~~~  105 (106)
T 2ee8_A           94 TLHMQTSSPTAA  105 (106)
T ss_dssp             HHTTSCCCCCCC
T ss_pred             HHhCCCCCCcCC
Confidence            999999988743

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=5.1e-22  Score=126.76  Aligned_cols=90  Identities=26%  Similarity=0.527  Sum_probs=84.8

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHh
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHY  189 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  189 (220)
                      ++++|.|.+|++.|.+...|..|++.|+++++|.|+.|++.|.....|..|+++|+++++|.|.+|++.|.+...|..|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccCCC
Q psy11591        190 KSHSMFIPPE  199 (220)
Q Consensus       190 ~~h~~~~~~~  199 (220)
                      ++|++++++.
T Consensus        85 ~~h~~~~~p~   94 (96)
T 2dmd_A           85 RSHTGDSGPS   94 (96)
T ss_dssp             TTCCSCCCCC
T ss_pred             HHhcCCCCCC
Confidence            9999987654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.86  E-value=6.1e-22  Score=124.85  Aligned_cols=86  Identities=27%  Similarity=0.624  Sum_probs=79.7

Q ss_pred             CcceecC--cCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHH
Q psy11591        111 DIKFKCN--YCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQH  188 (220)
Q Consensus       111 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  188 (220)
                      ++||.|+  .|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            5689998  59999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccccc
Q psy11591        189 YKSHSMFI  196 (220)
Q Consensus       189 ~~~h~~~~  196 (220)
                      +++|++++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            99999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.86  E-value=7e-22  Score=122.35  Aligned_cols=82  Identities=30%  Similarity=0.678  Sum_probs=77.8

Q ss_pred             ceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhc
Q psy11591        113 KFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       113 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      ||.|++|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cc
Q psy11591        193 SM  194 (220)
Q Consensus       193 ~~  194 (220)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.9e-20  Score=119.18  Aligned_cols=86  Identities=28%  Similarity=0.646  Sum_probs=79.9

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCC--CcccccccccccCchhHHHH
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSV--NTFVCEVCNTGFKVKKHLTQ  187 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~  187 (220)
                      ++++|.|.+|++.|.+...|..|++.|+++++|.|+.|++.|.....|..|+++|+++  ++|.|.+|++.|.+...|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            4678999999999999999999999999999999999999999999999999999987  89999999999999999999


Q ss_pred             Hhh-hcccc
Q psy11591        188 HYK-SHSMF  195 (220)
Q Consensus       188 H~~-~h~~~  195 (220)
                      |++ +|.++
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            986 67654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=4.1e-20  Score=120.00  Aligned_cols=90  Identities=28%  Similarity=0.650  Sum_probs=74.6

Q ss_pred             CCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHH
Q psy11591         83 DEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHK  161 (220)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  161 (220)
                      ++++|.|..|++.|.....|..|++.| ++++|.|.+|++.|.....|..|++.|+++++|.|++|++.|.....|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            456677777777777777777777777 5677888888888888888999988888889999999999999999999999


Q ss_pred             HHcCCCCcccc
Q psy11591        162 DTHNSVNTFVC  172 (220)
Q Consensus       162 ~~h~~~~~~~C  172 (220)
                      ++|+++++|.+
T Consensus        94 ~~H~~~~~~~~  104 (106)
T 2ee8_A           94 TLHMQTSSPTA  104 (106)
T ss_dssp             HHTTSCCCCCC
T ss_pred             HHhCCCCCCcC
Confidence            99998888754

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.8e-20  Score=121.04  Aligned_cols=89  Identities=16%  Similarity=0.292  Sum_probs=73.1

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHh
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHY  189 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  189 (220)
                      ++++|.|.+|++.|.+...|..|++.|.  ++|.|++|++.|.....|..|+. |+++++|.|.+|++.|.+...|..|+
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~   89 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQ   89 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHH
Confidence            4567788888888888888888888773  67888888888888888888885 88888888888888888888888888


Q ss_pred             h-hcccccCCCCC
Q psy11591        190 K-SHSMFIPPEQF  201 (220)
Q Consensus       190 ~-~h~~~~~~~~~  201 (220)
                      + +|.+++++.++
T Consensus        90 ~~~H~~~~~~~~~  102 (107)
T 1wjp_A           90 VEVHNQNNMAPTS  102 (107)
T ss_dssp             HHTSCCCCCCCCC
T ss_pred             HHHcCCCCCCCCC
Confidence            6 88888887753

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=1.3e-20  Score=122.63  Aligned_cols=94  Identities=21%  Similarity=0.359  Sum_probs=82.1

Q ss_pred             HhhcCCCCcccCchhhhhcCCHHHHHhHHHHhCCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHH
Q psy11591         78 IRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYL  157 (220)
Q Consensus        78 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  157 (220)
                      ++.+.++++|.|..|++.|.....|..|++.| .++|.|.+|++.|.....|..|++ |+++++|.|++|++.|.....|
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH-HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHC-CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            34567788888888888888888888888887 468999999999999999999996 9999999999999999999999


Q ss_pred             HHHHH-HcCCCCccccc
Q psy11591        158 KRHKD-THNSVNTFVCE  173 (220)
Q Consensus       158 ~~H~~-~h~~~~~~~C~  173 (220)
                      ..|++ +|.++++|.++
T Consensus        86 ~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCC
Confidence            99997 88899998875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=5.5e-20  Score=117.21  Aligned_cols=89  Identities=25%  Similarity=0.487  Sum_probs=74.7

Q ss_pred             CCCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHH
Q psy11591         82 TDEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRH  160 (220)
Q Consensus        82 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  160 (220)
                      .++++|.|..|++.|.....|..|++.| +.++|.|..|++.|.+...|..|++.|+++++|.|++|++.|.....|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            4567778888888888888888887777 567888888999998888999999999889999999999999999999999


Q ss_pred             HHHcCCCCcc
Q psy11591        161 KDTHNSVNTF  170 (220)
Q Consensus       161 ~~~h~~~~~~  170 (220)
                      +++|+++++.
T Consensus        84 ~~~h~~~~~p   93 (96)
T 2dmd_A           84 LRSHTGDSGP   93 (96)
T ss_dssp             HTTCCSCCCC
T ss_pred             HHHhcCCCCC
Confidence            9998887653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.81  E-value=1.8e-20  Score=107.92  Aligned_cols=58  Identities=26%  Similarity=0.551  Sum_probs=50.8

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhccccc
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      |+||.|++||++|...+.|..|+++|++++||.|.+|+++|.+.+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6889999999999999999999999988899999999999999999999998888875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=4.1e-20  Score=120.85  Aligned_cols=86  Identities=26%  Similarity=0.572  Sum_probs=78.8

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHh
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHY  189 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  189 (220)
                      ++++|.| .|++.|.+...|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.+...|..|+
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   85 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV   85 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHH
Confidence            5678999 899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccccc
Q psy11591        190 KSHSMFI  196 (220)
Q Consensus       190 ~~h~~~~  196 (220)
                      ++|+...
T Consensus        86 ~~~~~~~   92 (110)
T 2csh_A           86 TSCTKSY   92 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHccccc
Confidence            9887653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.81  E-value=5.8e-20  Score=115.67  Aligned_cols=86  Identities=31%  Similarity=0.675  Sum_probs=68.9

Q ss_pred             CCCcccCc--hhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHH
Q psy11591         83 DEKKYMCE--LCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKR  159 (220)
Q Consensus        83 ~~~~~~C~--~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  159 (220)
                      |+++|.|+  .|++.|.....|..|++.| ++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|...+.|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            35677776  5778888777777787777 66778888888888888888888888888888999999999998889999


Q ss_pred             HHHHcCCCC
Q psy11591        160 HKDTHNSVN  168 (220)
Q Consensus       160 H~~~h~~~~  168 (220)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            988888764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=1.6e-21  Score=128.64  Aligned_cols=94  Identities=17%  Similarity=0.283  Sum_probs=63.5

Q ss_pred             HhHHHHh-CCcceecCcCccccCChhhHHHHHhh--hcCCCcee-CCcccccc--CCHHHHHHHHHHcCCCCcccccccc
Q psy11591        103 YNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKT--HTDNSLYI-CEICGKDF--GTARYLKRHKDTHNSVNTFVCEVCN  176 (220)
Q Consensus       103 ~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~  176 (220)
                      ..|++.| ++++|.|.+|++.|.+...|..|++.  |.+.+++. |+.|++.|  .....|..|+++|+++++|.|.+|+
T Consensus         8 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~   87 (115)
T 2dmi_A            8 KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCG   87 (115)
T ss_dssp             CCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSC
T ss_pred             hhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCC
Confidence            3444444 45566666666666666666666666  55555443 77777777  6777777777777777777777777


Q ss_pred             cccCchhHHHHHhhhccccc
Q psy11591        177 TGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       177 ~~f~~~~~l~~H~~~h~~~~  196 (220)
                      +.|.+...|..|+++|+...
T Consensus        88 k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           88 HSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CBCSSHHHHHHHHHHTTTTT
T ss_pred             CccCCHHHHHHHHHHhCCcc
Confidence            77777777777777766554

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=1.1e-19  Score=112.28  Aligned_cols=81  Identities=30%  Similarity=0.718  Sum_probs=69.2

Q ss_pred             cccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHc
Q psy11591         86 KYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  164 (220)
                      ||.|+.|++.|.....|..|++.| ++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            467888888888888888888777 6778888889999999999999999999999999999999999999999999888


Q ss_pred             CC
Q psy11591        165 NS  166 (220)
Q Consensus       165 ~~  166 (220)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.80  E-value=2.7e-19  Score=114.80  Aligned_cols=85  Identities=36%  Similarity=0.711  Sum_probs=79.3

Q ss_pred             CCcceecCc--CccccCChhhHHHHHhhhcCCCceeCC--ccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHH
Q psy11591        110 NDIKFKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICE--ICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHL  185 (220)
Q Consensus       110 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  185 (220)
                      ..++|.|..  |++.|.+...|..|++.|.++++|.|+  .|++.|.....|..|+++|+++++|.|.+|++.|.+...|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            356799986  999999999999999999999999996  5999999999999999999999999999999999999999


Q ss_pred             HHHhhhccc
Q psy11591        186 TQHYKSHSM  194 (220)
Q Consensus       186 ~~H~~~h~~  194 (220)
                      ..|+++|.+
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999999874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=5e-21  Score=126.24  Aligned_cols=103  Identities=18%  Similarity=0.218  Sum_probs=84.0

Q ss_pred             hhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHHHH--h-CCcc-eecCcCcccc--CChhhHHHHHhhhcCCCceeC
Q psy11591         71 KSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFT--H-NDIK-FKCNYCEKVY--NNPSNLQRHIKTHTDNSLYIC  144 (220)
Q Consensus        71 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~--~-~~~~-~~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C  144 (220)
                      ...|..|++.|+++++|.|+.|++.|.....|..|++.  + ...+ +.|.+|++.|  .....|..|+++|++++||.|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            34566677777788888888888888888888888877  4 3444 4599999988  889999999999999999999


Q ss_pred             CccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        145 EICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       145 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      ++|++.|...+.|..|+++|+.......+
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            99999999999999999998876654443

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.79  E-value=2.2e-19  Score=112.76  Aligned_cols=83  Identities=35%  Similarity=0.743  Sum_probs=78.2

Q ss_pred             CcceecCc--CccccCChhhHHHHHhhhcCCCceeCC--ccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHH
Q psy11591        111 DIKFKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICE--ICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLT  186 (220)
Q Consensus       111 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  186 (220)
                      ..+|.|..  |++.|.+...|..|++.|.++++|.|+  .|++.|.....|..|+++|+++++|.|+.|++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45789999  999999999999999999999999997  59999999999999999999999999999999999999999


Q ss_pred             HHhhhcc
Q psy11591        187 QHYKSHS  193 (220)
Q Consensus       187 ~H~~~h~  193 (220)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999873

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.77  E-value=7.5e-20  Score=114.72  Aligned_cols=85  Identities=24%  Similarity=0.516  Sum_probs=79.5

Q ss_pred             CcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhh
Q psy11591        111 DIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYK  190 (220)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  190 (220)
                      ++||.|++|++.|.+...|..|+++|+++++|.|+.|++.|...+.|..|+++|++ .+|.|..|++.|.+...|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            46899999999999999999999999999999999999999999999999999986 88999999999999999999998


Q ss_pred             hccccc
Q psy11591        191 SHSMFI  196 (220)
Q Consensus       191 ~h~~~~  196 (220)
                      .+++..
T Consensus        80 ~~h~~~   85 (88)
T 1llm_C           80 RLKKLV   85 (88)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            877654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=8.2e-19  Score=114.59  Aligned_cols=86  Identities=28%  Similarity=0.516  Sum_probs=73.2

Q ss_pred             hcCCCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHH
Q psy11591         80 THTDEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLK  158 (220)
Q Consensus        80 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  158 (220)
                      .|.++++|.| .|++.|.....|..|++.| +.++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            3567778888 7888888888888888877 5678889899999999999999999999999999999999999999999


Q ss_pred             HHHHHcCC
Q psy11591        159 RHKDTHNS  166 (220)
Q Consensus       159 ~H~~~h~~  166 (220)
                      .|+++|++
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            99988764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.3e-18  Score=110.58  Aligned_cols=85  Identities=27%  Similarity=0.647  Sum_probs=61.8

Q ss_pred             CCCcccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCC--CceeCCccccccCCHHHHHH
Q psy11591         83 DEKKYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDN--SLYICEICGKDFGTARYLKR  159 (220)
Q Consensus        83 ~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~  159 (220)
                      ++++|.|..|++.|.....|..|++.| ++++|.|++|++.|.+...|..|++.|+++  ++|.|++|++.|.....|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            456666666666666666666666666 456677777777777777788888777776  78888888888888888888


Q ss_pred             HHH-HcCCC
Q psy11591        160 HKD-THNSV  167 (220)
Q Consensus       160 H~~-~h~~~  167 (220)
                      |++ .|.++
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            875 55543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=1.1e-18  Score=100.41  Aligned_cols=58  Identities=33%  Similarity=0.632  Sum_probs=54.2

Q ss_pred             CcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        111 DIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      ++||.|.+|++.|...+.|..|+++|++++||.|++||++|...+.|.+|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999999999999999999999999864

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.75  E-value=1.9e-18  Score=107.45  Aligned_cols=78  Identities=27%  Similarity=0.520  Sum_probs=73.8

Q ss_pred             ceec--CcCccccCChhhHHHHHhhhcCCCceeCCc--cccccCCHHHHHHHHHHcCCCCcccccc---cccccCchhHH
Q psy11591        113 KFKC--NYCEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVNTFVCEV---CNTGFKVKKHL  185 (220)
Q Consensus       113 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  185 (220)
                      ||.|  +.|++.|.+.+.|..|+++|.++++|.|+.  |++.|.....|..|+++|++   |.|..   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5889  889999999999999999999999999988  99999999999999999998   99999   99999999999


Q ss_pred             HHHhhhcc
Q psy11591        186 TQHYKSHS  193 (220)
Q Consensus       186 ~~H~~~h~  193 (220)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.75  E-value=5.6e-19  Score=112.90  Aligned_cols=87  Identities=17%  Similarity=0.237  Sum_probs=77.0

Q ss_pred             ccCChhhHHHHHhhhcCCCceeCCccccccC-CHHHHHHHHHHcCC-CCcccccccccccCchhHHHHHhhhcccccCCC
Q psy11591        122 VYNNPSNLQRHIKTHTDNSLYICEICGKDFG-TARYLKRHKDTHNS-VNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPE  199 (220)
Q Consensus       122 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  199 (220)
                      .+.....+..|++.|.++++|.|+.|++.|. ....|..|+++|++ +++|.|.+|++.|.+...|..|+++|++++|..
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            4555677889999999999999999999999 99999999999998 999999999999999999999999999999877


Q ss_pred             CCCCCCCcc
Q psy11591        200 QFPGLDPTS  208 (220)
Q Consensus       200 ~~~~~~~~~  208 (220)
                      .........
T Consensus        85 ~~~~~~~~~   93 (98)
T 2gqj_A           85 AEASEGGES   93 (98)
T ss_dssp             CCCCCCCCC
T ss_pred             CCCCcccCC
Confidence            555444433

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.7e-17  Score=101.63  Aligned_cols=71  Identities=25%  Similarity=0.644  Sum_probs=63.3

Q ss_pred             CCcceecCc--CccccCChhhHHHHHh-hhcCCCceeCCc--cccccCCHHHHHHHHHHcCCCCcccccccccccC
Q psy11591        110 NDIKFKCNY--CEKVYNNPSNLQRHIK-THTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFK  180 (220)
Q Consensus       110 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  180 (220)
                      ++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.....|..|+++|+++++|.|.+|+++|.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            456788876  9999999999999998 688999999998  9999999999999999999999999999999884

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.71  E-value=3e-17  Score=105.20  Aligned_cols=84  Identities=24%  Similarity=0.572  Sum_probs=66.1

Q ss_pred             CCCcccCch--hhhhcCCHHHHHhHHHHh-CCcceecC--cCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHH
Q psy11591         83 DEKKYMCEL--CGAEFAQWATLYNHKFTH-NDIKFKCN--YCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYL  157 (220)
Q Consensus        83 ~~~~~~C~~--C~~~f~~~~~l~~h~~~~-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  157 (220)
                      ..++|.|..  |++.|.....|..|++.| +.++|.|.  .|++.|.+...|..|++.|+++++|.|++|++.|.....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            345666764  777777777777777766 56677885  5888888888888888888888888898899888888888


Q ss_pred             HHHHHHcCC
Q psy11591        158 KRHKDTHNS  166 (220)
Q Consensus       158 ~~H~~~h~~  166 (220)
                      ..|+++|++
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            888888764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=2.9e-17  Score=104.28  Aligned_cols=79  Identities=19%  Similarity=0.278  Sum_probs=71.4

Q ss_pred             ccccCChhhHHHHHhhhcCCCceeCCcccccc-CCHHHHHHHHHHcCCCCcccccccccccCchhHHHHH-hhhcccccC
Q psy11591        120 EKVYNNPSNLQRHIKTHTDNSLYICEICGKDF-GTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQH-YKSHSMFIP  197 (220)
Q Consensus       120 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~  197 (220)
                      ...|.....|..|.+.+.++++|.|+.|++.| .....|..|+++| ++++|.|.+|++.|.....|..| +++|.++..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            34567788899999999999999999999999 9999999999999 99999999999999999999999 889987655


Q ss_pred             CC
Q psy11591        198 PE  199 (220)
Q Consensus       198 ~~  199 (220)
                      +.
T Consensus        92 ~~   93 (96)
T 2ctd_A           92 GP   93 (96)
T ss_dssp             CS
T ss_pred             CC
Confidence            54

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.7e-17  Score=101.16  Aligned_cols=65  Identities=28%  Similarity=0.624  Sum_probs=56.7

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      +.++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            56678888988999998888888998888888889999999999888999999988888888876

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=2.2e-17  Score=103.48  Aligned_cols=80  Identities=25%  Similarity=0.596  Sum_probs=59.3

Q ss_pred             CcccCch--hhhhcCCHHHHHhHHHHh-CCcceecC--cCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHH
Q psy11591         85 KKYMCEL--CGAEFAQWATLYNHKFTH-NDIKFKCN--YCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKR  159 (220)
Q Consensus        85 ~~~~C~~--C~~~f~~~~~l~~h~~~~-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  159 (220)
                      .+|.|..  |++.|.....|..|++.| ++++|.|+  .|++.|.+...|..|++.|+++++|.|+.|++.|...+.|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            4566666  666666666666666666 45667775  488888888888888888888888888888888888888888


Q ss_pred             HHHHc
Q psy11591        160 HKDTH  164 (220)
Q Consensus       160 H~~~h  164 (220)
                      |+++|
T Consensus        84 H~~~H   88 (89)
T 2wbs_A           84 HMKRH   88 (89)
T ss_dssp             HGGGG
T ss_pred             HHHhh
Confidence            87776

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.69  E-value=1.3e-18  Score=116.88  Aligned_cols=72  Identities=24%  Similarity=0.410  Sum_probs=61.1

Q ss_pred             ccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhccccc
Q psy11591        122 VYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       122 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      .|.....|..|+ .|++++||.|+.|++.|...+.|..|+++|  ++||.|..|++.|.+...|..|+++|+|+.
T Consensus        56 ~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           56 LLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             GTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             ccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            345566777777 588889999999999999999999999988  788999999999999999999999988763

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.8e-17  Score=103.23  Aligned_cols=75  Identities=23%  Similarity=0.356  Sum_probs=55.1

Q ss_pred             HHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCC----CcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        129 LQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSV----NTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       129 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      +..|+++|+++++|.|++|++.|.....|..|++++++.    ++|.|..|++.|.....|..|+++|++++++.|...
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            345667777777777777777777777777777766654    577777777777777777777777777777776554

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.68  E-value=4.6e-17  Score=98.47  Aligned_cols=64  Identities=25%  Similarity=0.499  Sum_probs=53.8

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCC
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPP  198 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  198 (220)
                      .+.++++|.|+.|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3567788888888888888888888888888888888888888888888888888888888775

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=4.7e-17  Score=101.30  Aligned_cols=77  Identities=23%  Similarity=0.456  Sum_probs=63.7

Q ss_pred             HhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCC----CceeCCccccccCCHHHHHHHHHHcCCCCccccccccc
Q psy11591        103 YNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDN----SLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNT  177 (220)
Q Consensus       103 ~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  177 (220)
                      ..|+++| ++++|.|.+|++.|.....|..|++.++.+    ++|.|++|++.|.....|..|+++|++++++.|..|+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            4566666 567788888888888888888888877655    68999999999999999999999999999999998887


Q ss_pred             cc
Q psy11591        178 GF  179 (220)
Q Consensus       178 ~f  179 (220)
                      +|
T Consensus        84 ~~   85 (86)
T 1x6h_A           84 SS   85 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=6.5e-17  Score=96.69  Aligned_cols=65  Identities=18%  Similarity=0.319  Sum_probs=59.4

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCC
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPE  199 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  199 (220)
                      .+.++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++|..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            36788999999999999999999999999999999999999999999999999999999988643

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=8.6e-17  Score=96.71  Aligned_cols=65  Identities=25%  Similarity=0.483  Sum_probs=59.6

Q ss_pred             HhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhcccccC
Q psy11591        133 IKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIP  197 (220)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  197 (220)
                      .++|.++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.+...|..|+++|+++.+
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            35688999999999999999999999999999999999999999999999999999999987753

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.65  E-value=3e-16  Score=97.36  Aligned_cols=77  Identities=32%  Similarity=0.672  Sum_probs=60.1

Q ss_pred             cccC--chhhhhcCCHHHHHhHHHHh-CCcceecCc--CccccCChhhHHHHHhhhcCCCceeCCc---cccccCCHHHH
Q psy11591         86 KYMC--ELCGAEFAQWATLYNHKFTH-NDIKFKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICEI---CGKDFGTARYL  157 (220)
Q Consensus        86 ~~~C--~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  157 (220)
                      ||.|  +.|++.|.....|..|++.| ++++|.|+.  |++.|.+...|..|+++|++   |.|+.   |++.|...+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4667  77777777777777777777 667788877  88888888888888888877   88888   88888888888


Q ss_pred             HHHHHHcC
Q psy11591        158 KRHKDTHN  165 (220)
Q Consensus       158 ~~H~~~h~  165 (220)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            88887764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.65  E-value=9e-18  Score=105.13  Aligned_cols=77  Identities=17%  Similarity=0.351  Sum_probs=37.2

Q ss_pred             cccCchhhhhcCCHHHHHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHH
Q psy11591         86 KYMCELCGAEFAQWATLYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus        86 ~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      +|.|+.|++.|.....|..|++.| ++++|.|+.|++.|...+.|..|++.|++ .+|.|+.|++.|.....|..|++.
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            444444444444444444444444 34444454455555555555555544442 445555555555555555555443

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.2e-16  Score=96.21  Aligned_cols=63  Identities=30%  Similarity=0.602  Sum_probs=58.7

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      ++++|.|.+|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            567899999999999999999999999999999999999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.4e-16  Score=101.69  Aligned_cols=66  Identities=23%  Similarity=0.237  Sum_probs=39.3

Q ss_pred             cCCCceeCCccccccCCHHHHHHHHH-Hc---CCCCcccccccccccCchhHHHHH-hhhcccccCCCCCC
Q psy11591        137 TDNSLYICEICGKDFGTARYLKRHKD-TH---NSVNTFVCEVCNTGFKVKKHLTQH-YKSHSMFIPPEQFP  202 (220)
Q Consensus       137 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~~~~  202 (220)
                      .|++||.|+.|++.|...+.|..|++ +|   .+++||.|..|+++|.+...|..| +++|.|++||.|..
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            45556666666666666666666655 35   345566666666666666666666 56666666665543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=8.5e-17  Score=98.04  Aligned_cols=69  Identities=25%  Similarity=0.408  Sum_probs=60.8

Q ss_pred             HHHHHhhhcCCCceeCCccccccCCHHHHHHHHH-HcCCC-CcccccccccccCchhHHHHHhhhcccccC
Q psy11591        129 LQRHIKTHTDNSLYICEICGKDFGTARYLKRHKD-THNSV-NTFVCEVCNTGFKVKKHLTQHYKSHSMFIP  197 (220)
Q Consensus       129 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  197 (220)
                      |..|+++|++++||.|++|++.|.....|..|+. .|.++ ++|.|..|++.|.+...|..|++++++...
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            3457889999999999999999999999999997 57664 899999999999999999999998776553

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.63  E-value=9.5e-17  Score=107.73  Aligned_cols=112  Identities=18%  Similarity=0.322  Sum_probs=80.5

Q ss_pred             hcCCCCcccccccccccCChhHHHHHHhh---cCCCCcccCchhhhhcC------CHHHHHhHHHHhCCcceecCcCccc
Q psy11591         52 VHERIRTHQCNHCGRAFSDKSNLTVHIRT---HTDEKKYMCELCGAEFA------QWATLYNHKFTHNDIKFKCNYCEKV  122 (220)
Q Consensus        52 ~h~~~~~~~C~~C~~~~~~~~~l~~h~~~---~~~~~~~~C~~C~~~f~------~~~~l~~h~~~~~~~~~~C~~C~~~  122 (220)
                      .+++.++|.|...+....  ..+..+.+.   ...++.+.|.+|++.|.      ....|..|+..++++||.|++|++.
T Consensus         6 ~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~   83 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMP   83 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCE
T ss_pred             hcccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcc
Confidence            355666666655433221  122222111   12234566777766554      6677777776558889999999999


Q ss_pred             cCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        123 YNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       123 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      |.....|..|+++|  ++||.|+.|++.|...+.|..|+++|+++
T Consensus        84 f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           84 FSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             ESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            99999999999998  88999999999999999999999999885

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.9e-16  Score=100.20  Aligned_cols=68  Identities=21%  Similarity=0.344  Sum_probs=60.9

Q ss_pred             CCcceecCcCccccCChhhHHHHHh-hh---cCCCceeCCccccccCCHHHHHHH-HHHcCCCCccccccccc
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIK-TH---TDNSLYICEICGKDFGTARYLKRH-KDTHNSVNTFVCEVCNT  177 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  177 (220)
                      +++||.|..|++.|...+.|..|++ .|   .+++||.|+.||+.|...+.|..| +++|++++||.|.++..
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            5778999999999999999999997 48   568899999999999999999999 89999999999988543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=3.5e-16  Score=96.43  Aligned_cols=63  Identities=24%  Similarity=0.469  Sum_probs=53.8

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHh-hhccccc
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHY-KSHSMFI  196 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  196 (220)
                      ..+.+.++|.|++|++.|.+.+.|.+|+++|++++||.|.+|+++|.+...|..|+ ++|.++.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34567788999999999999999999999999999999999999999999999996 5676654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.62  E-value=3e-16  Score=89.81  Aligned_cols=56  Identities=32%  Similarity=0.559  Sum_probs=39.6

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhccc
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      +++|.|+.|++.|...+.|..|+++|+++++|.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            56777777777777777777777777777777777777777777777777777653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.3e-16  Score=92.43  Aligned_cols=62  Identities=26%  Similarity=0.500  Sum_probs=54.6

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHHHHH-c-CCCCcccccccccccCchhHHHHHhhhcccc
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRHKDT-H-NSVNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ++|.+++||.|+.|++.|...+.|..|+++ | .++++|.|+.|++.|.+.+.|..|+++|++.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~i   66 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI   66 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC-
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcCC
Confidence            467888999999999999999999999987 6 4889999999999999999999999988863

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.61  E-value=1.2e-15  Score=92.10  Aligned_cols=61  Identities=31%  Similarity=0.694  Sum_probs=56.1

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcc
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTF  170 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  170 (220)
                      +.++|.|..|++.|.+...|..|++.|+++++|.|++|++.|...+.|.+|+++|++++||
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5678999999999999999999999999999999999999999999999999999998876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=8.6e-16  Score=93.96  Aligned_cols=71  Identities=34%  Similarity=0.693  Sum_probs=55.4

Q ss_pred             CCCCcccCch--hhhhcCCHHHHHhHHH-Hh-CCcceecCc--CccccCChhhHHHHHhhhcCCCceeCCccccccC
Q psy11591         82 TDEKKYMCEL--CGAEFAQWATLYNHKF-TH-NDIKFKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFG  152 (220)
Q Consensus        82 ~~~~~~~C~~--C~~~f~~~~~l~~h~~-~~-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  152 (220)
                      +++++|.|..  |++.|.....|..|++ .| ++++|.|++  |++.|.+...|..|+++|+++++|.|++|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            3566777765  7777777777777777 56 567788887  8888888888888888888888888888888773

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.60  E-value=9.2e-16  Score=87.72  Aligned_cols=56  Identities=41%  Similarity=0.708  Sum_probs=43.0

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhccccc
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      ||.|+.|++.|...+.|..|+++|+++++|.|+.|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            46777777777777777777777777777777777777777777777777777664

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=9.1e-16  Score=93.64  Aligned_cols=64  Identities=27%  Similarity=0.496  Sum_probs=56.3

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCC---CCcccccccccccCchhHHHHHhh-hcccccCCC
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNS---VNTFVCEVCNTGFKVKKHLTQHYK-SHSMFIPPE  199 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~  199 (220)
                      |+++++|.|++|++.|.....|..|+++|++   +++|.|.+|++.|.....|..|++ .|.++.+..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            6789999999999999999999999999986   899999999999999999999995 555555444

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=4.4e-15  Score=94.14  Aligned_cols=75  Identities=20%  Similarity=0.377  Sum_probs=59.7

Q ss_pred             hcCCHHHHHhHHHHh-CCcceecCcCcccc-CChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHH-HHHcCCCCcc
Q psy11591         95 EFAQWATLYNHKFTH-NDIKFKCNYCEKVY-NNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRH-KDTHNSVNTF  170 (220)
Q Consensus        95 ~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~  170 (220)
                      +|.....+..|++.+ ++++|.|+.|++.| .+...|..|+++| ++++|.|.+|++.|...+.|..| +++|+++..|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            345555666666666 67788888899999 8888999999998 88999999999999999999999 7788764333

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=5.6e-16  Score=98.84  Aligned_cols=70  Identities=17%  Similarity=0.249  Sum_probs=49.3

Q ss_pred             HHhHHHHh-CCcceecCcCccccC-ChhhHHHHHhhhcC-CCceeCCccccccCCHHHHHHHHHHcCCCCccc
Q psy11591        102 LYNHKFTH-NDIKFKCNYCEKVYN-NPSNLQRHIKTHTD-NSLYICEICGKDFGTARYLKRHKDTHNSVNTFV  171 (220)
Q Consensus       102 l~~h~~~~-~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  171 (220)
                      +..|++.| ++++|.|.+|++.|. ....|..|+++|++ +++|.|++|++.|.....|..|+++|++++|+.
T Consensus        12 ~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             HHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            34555555 456667777777777 77777777777776 777777777777777777777777777776643

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.55  E-value=5.9e-15  Score=84.29  Aligned_cols=56  Identities=29%  Similarity=0.602  Sum_probs=49.5

Q ss_pred             CcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCC
Q psy11591        111 DIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      +++|.|++|++.|.+...|..|+++|++++||.|+.|++.|...+.|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            56899999999999999999999999999999999999999999999999998874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=7.9e-15  Score=87.49  Aligned_cols=61  Identities=18%  Similarity=0.324  Sum_probs=55.0

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcc
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTF  170 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  170 (220)
                      ++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.....|..|+++|++++|.
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            4678999999999999999999999999999999999999999999999999999988764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.54  E-value=1.2e-14  Score=82.94  Aligned_cols=56  Identities=34%  Similarity=0.643  Sum_probs=52.9

Q ss_pred             ceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        113 KFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       113 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      ||.|+.|++.|.+...|..|+++|+++++|.|+.|++.|...+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58899999999999999999999999999999999999999999999999998875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=7.8e-15  Score=84.72  Aligned_cols=56  Identities=32%  Similarity=0.685  Sum_probs=44.8

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHh-hhcccc
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHY-KSHSMF  195 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  195 (220)
                      +||.|+.|++.|...+.|..|+++|+++++|.|+.|++.|.+...|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            46788888888888888888888888888888888888888888888886 566654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=2e-14  Score=88.57  Aligned_cols=59  Identities=22%  Similarity=0.459  Sum_probs=53.0

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHH-HcCCCC
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKD-THNSVN  168 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  168 (220)
                      ..++|.|++|++.|.+...|..|+++|++++||.|++|++.|.....|.+|++ +|.+++
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            45679999999999999999999999999999999999999999999999974 676654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.8e-14  Score=86.42  Aligned_cols=59  Identities=31%  Similarity=0.555  Sum_probs=52.2

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      ++++|.|.+|++.|.....|..|++.|.++++|.|++|++.|.....|.+|+++|+++.
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            56788999999999999999999999999999999999999999999999999887753

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=4.9e-17  Score=97.96  Aligned_cols=70  Identities=20%  Similarity=0.218  Sum_probs=62.6

Q ss_pred             hhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        126 PSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       126 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      .+.|..|+++|.++++|.|+.|++.|...+.|..       +++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            4567788889999999999999999998888766       789999999999999999999999999999999875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.6e-14  Score=86.82  Aligned_cols=59  Identities=29%  Similarity=0.637  Sum_probs=52.3

Q ss_pred             hhcCCCceeCC--ccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhcc
Q psy11591        135 THTDNSLYICE--ICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       135 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      .+.++++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            46788899997  599999999999999999999999999999999999999999998874

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=4.1e-14  Score=89.54  Aligned_cols=62  Identities=21%  Similarity=0.185  Sum_probs=49.8

Q ss_pred             ceeCCccccccCCHHHHHHHHHH-cCCCCc--------ccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        141 LYICEICGKDFGTARYLKRHKDT-HNSVNT--------FVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      .+.|+.|++.|.....|..|+++ |.++++        |.|..|++.|.+...|..|+++|++++||.|++
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            35677888888888888888876 777666        888888888888888888888888888888763

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.1e-14  Score=83.27  Aligned_cols=57  Identities=28%  Similarity=0.628  Sum_probs=50.6

Q ss_pred             CCcceecCcCccccCChhhHHHHHhh-h-cCCCceeCCccccccCCHHHHHHHHHHcCC
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKT-H-TDNSLYICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      +++||.|+.|++.|.+...|..|++. | .++++|.|+.|++.|...+.|..|++++++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            57789999999999999999999987 6 588999999999999999999999998876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=3.9e-14  Score=83.39  Aligned_cols=60  Identities=18%  Similarity=0.329  Sum_probs=52.8

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc-ccccccCchhHHHHHhhhcccccC
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE-VCNTGFKVKKHLTQHYKSHSMFIP  197 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  197 (220)
                      ..+++||.|+.|++.|. .+.|..|+++ ++++||.|+ .|+++|...+.|..|+++|.+..|
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            35678999999999999 9999999988 889999999 999999999999999998876654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.8e-14  Score=86.73  Aligned_cols=64  Identities=22%  Similarity=0.466  Sum_probs=46.4

Q ss_pred             hHHHHh-CCcceecCcCccccCChhhHHHHHh-hhcCC-CceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        104 NHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIK-THTDN-SLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       104 ~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      .|+++| +++||.|.+|++.|.....|..|++ .|.++ ++|.|++|++.|.....|..|++++++.
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            355555 5667777777777777777888876 45553 6788888888888888888888776553

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.1e-13  Score=79.72  Aligned_cols=56  Identities=29%  Similarity=0.708  Sum_probs=50.8

Q ss_pred             cceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHH-HHcCCC
Q psy11591        112 IKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHK-DTHNSV  167 (220)
Q Consensus       112 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  167 (220)
                      +||.|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+.+.|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47899999999999999999999999999999999999999999999997 567654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=1.8e-13  Score=86.51  Aligned_cols=61  Identities=18%  Similarity=0.267  Sum_probs=54.6

Q ss_pred             ceecCcCccccCChhhHHHHHhh-hcCCCc--------eeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        113 KFKCNYCEKVYNNPSNLQRHIKT-HTDNSL--------YICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       113 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      .+.|..|++.|.....|..|++. |.++++        |.|+.|++.|.....|..|+++|++++||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            46788999999999999999987 888777        89999999999999999999999999999986

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=5.2e-13  Score=81.23  Aligned_cols=62  Identities=21%  Similarity=0.497  Sum_probs=49.6

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcC---CCceeCCccccccCCHHHHHHHHH-HcCCCCccc
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTD---NSLYICEICGKDFGTARYLKRHKD-THNSVNTFV  171 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~  171 (220)
                      ++++|.|.+|++.|.....|..|+++|++   +++|.|++|++.|.....|..|++ .|.++.+..
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            56788888888888888888888888875   788999999999999999999985 455555443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=3.2e-16  Score=94.36  Aligned_cols=66  Identities=23%  Similarity=0.320  Sum_probs=45.3

Q ss_pred             HhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        103 YNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       103 ~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      ..|++.| ++++|.|.+|++.|.+...|..       +++|.|+.|++.|...+.|..|+++|+++++|.|++|
T Consensus         7 ~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            7 GKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3444444 4556666666666666655544       6677788888888777777778777777777877776

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2.3e-13  Score=73.23  Aligned_cols=44  Identities=20%  Similarity=0.308  Sum_probs=32.6

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|+.|++.|...+.|..|+++|+++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567777777777777777777777777777777777777766

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.6e-13  Score=73.74  Aligned_cols=44  Identities=20%  Similarity=0.217  Sum_probs=34.8

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888776

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.7e-13  Score=73.67  Aligned_cols=44  Identities=23%  Similarity=0.357  Sum_probs=32.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.35  E-value=9.5e-13  Score=78.73  Aligned_cols=57  Identities=30%  Similarity=0.593  Sum_probs=49.1

Q ss_pred             hcCCCceeCCc--cccccCCHHHHHHHHHHcCCCCcccccc--cccccCchhHHHHHhhhc
Q psy11591        136 HTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVNTFVCEV--CNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       136 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  192 (220)
                      ....++|.|+.  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45667889988  9999999999999999999999999965  999999999999998775

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.8e-13  Score=73.62  Aligned_cols=44  Identities=25%  Similarity=0.310  Sum_probs=33.4

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777766

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.8e-13  Score=73.61  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=29.4

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.3e-13  Score=72.87  Aligned_cols=44  Identities=25%  Similarity=0.361  Sum_probs=31.4

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777665

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=1.1e-12  Score=78.70  Aligned_cols=56  Identities=29%  Similarity=0.675  Sum_probs=50.2

Q ss_pred             CCcceecC--cCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcC
Q psy11591        110 NDIKFKCN--YCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       110 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  165 (220)
                      ++++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|...+.|.+|+++|+
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            56789997  599999999999999999999999999999999999999999998774

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.35  E-value=3e-13  Score=73.53  Aligned_cols=44  Identities=23%  Similarity=0.327  Sum_probs=30.3

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666777777777777777777777777777777777665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.7e-13  Score=73.69  Aligned_cols=44  Identities=27%  Similarity=0.402  Sum_probs=31.4

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.8e-13  Score=73.11  Aligned_cols=44  Identities=25%  Similarity=0.360  Sum_probs=30.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666777777777777777777777777777777776665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.1e-13  Score=72.95  Aligned_cols=44  Identities=25%  Similarity=0.446  Sum_probs=32.5

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777766

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.34  E-value=2.8e-13  Score=73.63  Aligned_cols=44  Identities=23%  Similarity=0.256  Sum_probs=28.4

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.8e-13  Score=73.08  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=33.7

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777787787777777777777777777777777766

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.5e-13  Score=73.22  Aligned_cols=44  Identities=25%  Similarity=0.367  Sum_probs=30.4

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666777777777777777777777777777777777665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3e-13  Score=73.50  Aligned_cols=44  Identities=25%  Similarity=0.331  Sum_probs=30.5

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.9e-13  Score=73.58  Aligned_cols=44  Identities=23%  Similarity=0.301  Sum_probs=31.8

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.9e-13  Score=73.56  Aligned_cols=44  Identities=20%  Similarity=0.272  Sum_probs=27.4

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.9e-13  Score=73.58  Aligned_cols=44  Identities=25%  Similarity=0.335  Sum_probs=25.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            34455555555555555555555555555555555555555554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.7e-13  Score=73.14  Aligned_cols=44  Identities=23%  Similarity=0.282  Sum_probs=30.7

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.3e-13  Score=73.37  Aligned_cols=44  Identities=25%  Similarity=0.292  Sum_probs=30.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.34  E-value=2.7e-13  Score=73.71  Aligned_cols=44  Identities=20%  Similarity=0.265  Sum_probs=27.6

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.2e-13  Score=73.42  Aligned_cols=44  Identities=16%  Similarity=0.234  Sum_probs=31.5

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777665

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.9e-13  Score=73.57  Aligned_cols=44  Identities=23%  Similarity=0.303  Sum_probs=31.6

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|+.|++.|...+.|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.34  E-value=3.6e-13  Score=73.18  Aligned_cols=44  Identities=23%  Similarity=0.324  Sum_probs=29.0

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.9e-13  Score=73.06  Aligned_cols=44  Identities=20%  Similarity=0.249  Sum_probs=32.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45567777777777777777777777777777777777777765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.33  E-value=3e-13  Score=73.51  Aligned_cols=44  Identities=16%  Similarity=0.199  Sum_probs=25.2

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|+.|++.|...+.|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            34455555555555555555555555555555555555555554

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3.7e-13  Score=73.15  Aligned_cols=44  Identities=27%  Similarity=0.295  Sum_probs=29.6

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666667777777777777777777666666666666665

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.8e-13  Score=73.08  Aligned_cols=44  Identities=23%  Similarity=0.175  Sum_probs=30.5

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566667777777777777777777777777777777777665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.33  E-value=3.8e-13  Score=73.10  Aligned_cols=44  Identities=25%  Similarity=0.334  Sum_probs=29.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566666677777777777777777777666766667766665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.6e-13  Score=73.19  Aligned_cols=44  Identities=20%  Similarity=0.246  Sum_probs=26.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|.++++|.|+.|++.|...+.|.+|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34455666666666666666666666666666666666666554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=5.1e-13  Score=72.56  Aligned_cols=44  Identities=20%  Similarity=0.268  Sum_probs=32.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|+.|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45567777777777777777777777777777777777777766

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.9e-13  Score=73.06  Aligned_cols=44  Identities=25%  Similarity=0.341  Sum_probs=27.3

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34555666666666666666666666666666666666666655

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.3e-13  Score=73.36  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=30.2

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45566666777777777777777777777777777777777665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=8.8e-13  Score=77.51  Aligned_cols=58  Identities=19%  Similarity=0.288  Sum_probs=51.9

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCC-ccccccCCHHHHHHHHHHcCCCCc
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICE-ICGKDFGTARYLKRHKDTHNSVNT  169 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  169 (220)
                      +.+||.|..|++.|. .+.|..|+++ ++++||.|+ .|++.|...+.|..|+++|....+
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            467899999999999 9999999998 999999999 999999999999999998877654

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=5e-13  Score=72.61  Aligned_cols=44  Identities=16%  Similarity=0.074  Sum_probs=32.4

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45567777777777777777777777777777777777777766

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.6e-13  Score=73.22  Aligned_cols=43  Identities=23%  Similarity=0.281  Sum_probs=24.2

Q ss_pred             HhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        133 IKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      +++|++++||.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            4 GSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3445555555555555555555555555555555555555554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.8e-13  Score=73.10  Aligned_cols=44  Identities=23%  Similarity=0.224  Sum_probs=25.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555666666666666666666666666666666666554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.4e-13  Score=73.29  Aligned_cols=44  Identities=25%  Similarity=0.363  Sum_probs=25.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455555666666666666666666666666666566666554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.3e-13  Score=72.86  Aligned_cols=44  Identities=20%  Similarity=0.315  Sum_probs=28.8

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=1.5e-12  Score=73.33  Aligned_cols=47  Identities=30%  Similarity=0.546  Sum_probs=41.6

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHH-HcCCCCcccccccccccCc
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKD-THNSVNTFVCEVCNTGFKV  181 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  181 (220)
                      .+.++++|.|++|++.|.....|.+|++ +|.++++|.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3677889999999999999999999987 8999999999999999875

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.3e-13  Score=72.88  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=33.5

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45667777777777777777777777777777777777777766

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=4.4e-13  Score=72.83  Aligned_cols=44  Identities=18%  Similarity=0.231  Sum_probs=30.7

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.7e-13  Score=73.12  Aligned_cols=44  Identities=23%  Similarity=0.328  Sum_probs=31.4

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            45566777777777777777777777777777777777777665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.32  E-value=6.4e-13  Score=72.19  Aligned_cols=44  Identities=18%  Similarity=0.185  Sum_probs=31.2

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44566677777777777777777777777777777777777665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.1e-13  Score=72.97  Aligned_cols=44  Identities=23%  Similarity=0.314  Sum_probs=27.3

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455666666666666666666666666666666666666655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.2e-13  Score=73.43  Aligned_cols=44  Identities=25%  Similarity=0.327  Sum_probs=26.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666555

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.2e-13  Score=72.24  Aligned_cols=44  Identities=18%  Similarity=0.221  Sum_probs=32.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|.++++|.|+.|++.|...+.|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44566777777777777777777777777777777777777766

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.1e-13  Score=73.48  Aligned_cols=44  Identities=18%  Similarity=0.282  Sum_probs=24.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8e-13  Score=71.78  Aligned_cols=42  Identities=24%  Similarity=0.317  Sum_probs=21.3

Q ss_pred             HhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        133 IKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      +++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            4 GSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            344455555555555555555555555555555555555543

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.9e-13  Score=71.92  Aligned_cols=44  Identities=25%  Similarity=0.228  Sum_probs=28.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHH-HcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKD-THNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  175 (220)
                      |+++|.++++|.|+.|++.|...+.|..|++ +|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4455666666666666666666666666666 6666666666655

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=71.07  Aligned_cols=44  Identities=25%  Similarity=0.462  Sum_probs=31.9

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55567777777777777777777777777777777777777653

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=70.86  Aligned_cols=44  Identities=18%  Similarity=0.238  Sum_probs=27.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666553

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.1e-13  Score=71.56  Aligned_cols=43  Identities=19%  Similarity=0.324  Sum_probs=27.1

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4455666666666666666666666666666666666666654

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.5e-12  Score=70.73  Aligned_cols=43  Identities=16%  Similarity=0.354  Sum_probs=31.9

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|.+++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566777777777777777777777777777777777777765

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.2e-12  Score=71.01  Aligned_cols=43  Identities=19%  Similarity=0.301  Sum_probs=27.0

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3445666666666666666666666666666666666666654

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=1e-12  Score=71.32  Aligned_cols=43  Identities=23%  Similarity=0.371  Sum_probs=24.1

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3445555555555555555555555555555555555555543

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.27  E-value=4.6e-13  Score=75.41  Aligned_cols=50  Identities=14%  Similarity=0.269  Sum_probs=27.5

Q ss_pred             cccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCC
Q psy11591        149 KDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPP  198 (220)
Q Consensus       149 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  198 (220)
                      +.|...+.|..|+++|+++++|.|..|++.|...+.|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            34445555555555555555555555555555555555555555555544

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.5e-12  Score=70.70  Aligned_cols=43  Identities=19%  Similarity=0.340  Sum_probs=29.9

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            4556666777777777777777777777777777777776654

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.27  E-value=7e-14  Score=81.19  Aligned_cols=55  Identities=16%  Similarity=0.370  Sum_probs=47.7

Q ss_pred             HHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHH
Q psy11591        130 QRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQ  187 (220)
Q Consensus       130 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  187 (220)
                      ..|+++|++++||.|+.|++.|...+.|.   ++|.++++|.|+.|++.|.....+..
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccc
Confidence            45778899999999999999999988886   78999999999999999988766543

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=70.32  Aligned_cols=43  Identities=21%  Similarity=0.408  Sum_probs=30.7

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4556677777777777777777777777777777777777654

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.5e-12  Score=70.69  Aligned_cols=45  Identities=20%  Similarity=0.365  Sum_probs=41.7

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999754

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=70.48  Aligned_cols=43  Identities=19%  Similarity=0.318  Sum_probs=25.3

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            4445555566666666666666666666666666666665543

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.9e-12  Score=70.31  Aligned_cols=43  Identities=28%  Similarity=0.494  Sum_probs=30.5

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            3456677777777777777777777777777777777777664

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=9.7e-13  Score=71.45  Aligned_cols=42  Identities=19%  Similarity=0.275  Sum_probs=20.9

Q ss_pred             HHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        161 KDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       161 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +++|+++++|.|.+|++.|.....|..|+++|.+++||.|+.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            4 GSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             ccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            344444555555555555555555555555555555555443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.26  E-value=1.2e-12  Score=71.01  Aligned_cols=41  Identities=20%  Similarity=0.408  Sum_probs=21.0

Q ss_pred             HHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCC
Q psy11591        161 KDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       161 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                      +++|.++++|.|..|++.|.....|..|+++|.+++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            4 GSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444555555555555555555555555555555555544

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=70.34  Aligned_cols=43  Identities=19%  Similarity=0.345  Sum_probs=30.2

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            4556667777777777777777777777777777777777654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2e-12  Score=70.15  Aligned_cols=43  Identities=19%  Similarity=0.316  Sum_probs=28.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4555666666666667666666666766766666666666654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.26  E-value=2.2e-12  Score=68.54  Aligned_cols=39  Identities=26%  Similarity=0.433  Sum_probs=19.0

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      ++|+++++|.|+.|++.|...+.|..|+++|+++++|.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            344444445555555555555555555444444444444

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=70.42  Aligned_cols=43  Identities=21%  Similarity=0.441  Sum_probs=27.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.....|..|+++|.+++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            4455666666666666666666666666666666666666654

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.8e-12  Score=70.33  Aligned_cols=43  Identities=19%  Similarity=0.367  Sum_probs=29.9

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4556666777777777777777777777777777777777654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.3e-12  Score=69.88  Aligned_cols=45  Identities=20%  Similarity=0.378  Sum_probs=41.4

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      +|+++|+++++|.|+.|++.|.+...|..|+++|++++||.|+.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999998753

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2e-12  Score=70.13  Aligned_cols=43  Identities=26%  Similarity=0.388  Sum_probs=28.9

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4456666667777777777777777777777777766666653

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.5e-12  Score=70.65  Aligned_cols=42  Identities=19%  Similarity=0.390  Sum_probs=21.9

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            334455555555555555555555555555555555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.25  E-value=1.8e-12  Score=68.93  Aligned_cols=42  Identities=21%  Similarity=0.387  Sum_probs=39.2

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                      |+++|+++++|.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            456799999999999999999999999999999999999984

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=70.73  Aligned_cols=43  Identities=19%  Similarity=0.358  Sum_probs=25.2

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4445555566666666666666666666666666666665543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.6e-12  Score=70.54  Aligned_cols=41  Identities=29%  Similarity=0.526  Sum_probs=21.0

Q ss_pred             HHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCC
Q psy11591        161 KDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       161 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                      +++|+++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34444555555555555555555555555555555555544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.6e-12  Score=69.70  Aligned_cols=44  Identities=27%  Similarity=0.475  Sum_probs=33.8

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+.+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44567777888888888888888888888888888888877653

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.24  E-value=1.6e-12  Score=70.57  Aligned_cols=44  Identities=20%  Similarity=0.395  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.2e-12  Score=70.00  Aligned_cols=43  Identities=23%  Similarity=0.353  Sum_probs=40.7

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6778999999999999999999999999999999999999875

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.3e-12  Score=69.94  Aligned_cols=45  Identities=20%  Similarity=0.406  Sum_probs=41.7

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      +|+++|+++++|.|+.|++.|.+...|..|+++|++++||.|+.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467789999999999999999999999999999999999999753

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.24  E-value=2.7e-12  Score=69.66  Aligned_cols=44  Identities=18%  Similarity=0.253  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            36778999999999999999999999999999999999999875

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=9.7e-13  Score=71.45  Aligned_cols=42  Identities=21%  Similarity=0.442  Sum_probs=21.4

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            334445555555555555555555555555555555555544

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.3e-12  Score=69.89  Aligned_cols=44  Identities=18%  Similarity=0.456  Sum_probs=41.3

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.5e-12  Score=68.34  Aligned_cols=39  Identities=23%  Similarity=0.462  Sum_probs=20.7

Q ss_pred             HHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        162 DTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       162 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      ++|.++++|.|..|++.|.+.+.|..|+++|.+++||.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344555555555555555555555555555555555544

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.8e-12  Score=69.59  Aligned_cols=43  Identities=26%  Similarity=0.311  Sum_probs=39.2

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.1e-12  Score=70.05  Aligned_cols=43  Identities=21%  Similarity=0.406  Sum_probs=24.3

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3445555555555555555555555555555555555555543

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.7e-12  Score=69.62  Aligned_cols=44  Identities=18%  Similarity=0.289  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|+.|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.24  E-value=2.4e-12  Score=69.85  Aligned_cols=44  Identities=23%  Similarity=0.437  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778999999999999999999999999999999999999875

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.1e-12  Score=70.10  Aligned_cols=43  Identities=23%  Similarity=0.386  Sum_probs=25.4

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4445555566666666666666666666666666666665543

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=3.1e-12  Score=69.40  Aligned_cols=44  Identities=20%  Similarity=0.316  Sum_probs=39.8

Q ss_pred             HHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        131 RHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      .|+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778899999999999999999999999999999999999974

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3e-12  Score=69.42  Aligned_cols=44  Identities=16%  Similarity=0.287  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.7e-12  Score=69.62  Aligned_cols=43  Identities=21%  Similarity=0.332  Sum_probs=26.0

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|..|++.|.+...|..|+++|.+++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3445556666666666666666666666666666666666543

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=70.10  Aligned_cols=43  Identities=21%  Similarity=0.394  Sum_probs=29.0

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.....|..|+++|.+++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4556666667777777777777777777777777766666654

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.23  E-value=2.5e-12  Score=69.78  Aligned_cols=44  Identities=20%  Similarity=0.342  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.23  E-value=2.7e-12  Score=69.65  Aligned_cols=43  Identities=23%  Similarity=0.376  Sum_probs=40.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6678999999999999999999999999999999999999875

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.4e-12  Score=69.21  Aligned_cols=43  Identities=21%  Similarity=0.346  Sum_probs=40.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            6678999999999999999999999999999999999999875

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.8e-12  Score=69.05  Aligned_cols=43  Identities=16%  Similarity=0.306  Sum_probs=40.5

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5678999999999999999999999999999999999999875

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.2e-12  Score=69.30  Aligned_cols=43  Identities=21%  Similarity=0.358  Sum_probs=40.1

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4567999999999999999999999999999999999999875

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=5.5e-12  Score=68.05  Aligned_cols=42  Identities=17%  Similarity=0.332  Sum_probs=33.7

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccc
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCN  176 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  176 (220)
                      .|++++||.|+.|++.|...+.|..|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            467778888888888888888888888888888888888775

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.2e-12  Score=69.32  Aligned_cols=43  Identities=21%  Similarity=0.295  Sum_probs=40.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6678999999999999999999999999999999999999875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=67.67  Aligned_cols=42  Identities=17%  Similarity=0.297  Sum_probs=37.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |+++|.+++||.|+.|++.|...+.|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456788999999999999999999999999999999999884

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=69.14  Aligned_cols=43  Identities=23%  Similarity=0.363  Sum_probs=39.2

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999974

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.8e-12  Score=69.60  Aligned_cols=44  Identities=20%  Similarity=0.395  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3e-12  Score=69.44  Aligned_cols=44  Identities=18%  Similarity=0.391  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.1e-12  Score=69.37  Aligned_cols=43  Identities=23%  Similarity=0.308  Sum_probs=39.2

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=69.10  Aligned_cols=43  Identities=26%  Similarity=0.345  Sum_probs=39.3

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.23  E-value=2.3e-12  Score=72.48  Aligned_cols=52  Identities=19%  Similarity=0.282  Sum_probs=47.5

Q ss_pred             ccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccc
Q psy11591        120 EKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFV  171 (220)
Q Consensus       120 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  171 (220)
                      ++.|.....|..|+++|+++++|.|+.|++.|...+.|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4678888889999999999999999999999999999999999999998873

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.2e-12  Score=69.35  Aligned_cols=42  Identities=21%  Similarity=0.346  Sum_probs=28.9

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      ++|+++++|.|++|++.|...+.|..|+++|++++||.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            346666777777777777777777777777777777777665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.7e-12  Score=69.64  Aligned_cols=45  Identities=20%  Similarity=0.382  Sum_probs=41.3

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366789999999999999999999999999999999999998753

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.9e-12  Score=69.52  Aligned_cols=44  Identities=18%  Similarity=0.389  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.8e-12  Score=69.04  Aligned_cols=44  Identities=16%  Similarity=0.348  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.9e-12  Score=69.51  Aligned_cols=44  Identities=16%  Similarity=0.326  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      .|+++|+++++|.|+.|++.|.+.+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.4e-12  Score=69.23  Aligned_cols=43  Identities=21%  Similarity=0.398  Sum_probs=40.5

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6678999999999999999999999999999999999999875

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.7e-12  Score=69.63  Aligned_cols=43  Identities=23%  Similarity=0.422  Sum_probs=30.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4556677777777777777777777777777777777777654

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=6.5e-12  Score=68.78  Aligned_cols=42  Identities=29%  Similarity=0.461  Sum_probs=34.3

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccccc
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNT  177 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  177 (220)
                      +.++++|.|++|++.|.....|..|+++|++++||.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            566778888888888888888888888888888888888875

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.4e-12  Score=69.84  Aligned_cols=44  Identities=20%  Similarity=0.421  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.4e-12  Score=68.77  Aligned_cols=43  Identities=23%  Similarity=0.286  Sum_probs=39.2

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999864

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.8e-12  Score=69.03  Aligned_cols=44  Identities=20%  Similarity=0.373  Sum_probs=41.3

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|+.|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999875

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.7e-12  Score=69.66  Aligned_cols=44  Identities=20%  Similarity=0.375  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.1e-12  Score=70.11  Aligned_cols=43  Identities=21%  Similarity=0.359  Sum_probs=30.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4556677777777777777777777777777777777777654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.9e-12  Score=69.54  Aligned_cols=44  Identities=23%  Similarity=0.471  Sum_probs=41.0

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      |+++|+++++|.|..|++.|.....|..|+++|.+++||.|+.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66789999999999999999999999999999999999999753

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4e-12  Score=68.93  Aligned_cols=44  Identities=18%  Similarity=0.268  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|++|++.|.+...|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.21  E-value=1.4e-11  Score=73.56  Aligned_cols=55  Identities=33%  Similarity=0.640  Sum_probs=49.0

Q ss_pred             CCcceecCc--CccccCChhhHHHHHhhhcCCCceeCCc--cccccCCHHHHHHHHHHc
Q psy11591        110 NDIKFKCNY--CEKVYNNPSNLQRHIKTHTDNSLYICEI--CGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       110 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  164 (220)
                      ..++|.|..  |++.|.....|..|++.|+++++|.|++  |++.|.....|..|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            456789988  9999999999999999999999999965  999999999999998765

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.6e-12  Score=68.70  Aligned_cols=43  Identities=21%  Similarity=0.273  Sum_probs=39.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|++|++.|...+.|.+|+++|+++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999863

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3e-12  Score=69.47  Aligned_cols=45  Identities=22%  Similarity=0.459  Sum_probs=41.4

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++||.|+.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999998753

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.1e-12  Score=69.39  Aligned_cols=44  Identities=20%  Similarity=0.324  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.6e-12  Score=69.12  Aligned_cols=44  Identities=16%  Similarity=0.205  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778999999999999999999999999999999999999875

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.5e-12  Score=68.72  Aligned_cols=43  Identities=23%  Similarity=0.273  Sum_probs=39.3

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999974

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.9e-12  Score=69.49  Aligned_cols=44  Identities=23%  Similarity=0.397  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.6e-12  Score=69.11  Aligned_cols=43  Identities=26%  Similarity=0.349  Sum_probs=38.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999874

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-12  Score=69.64  Aligned_cols=44  Identities=18%  Similarity=0.314  Sum_probs=41.2

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|..|++.|.+.+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            46778999999999999999999999999999999999999875

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.21  E-value=4.3e-12  Score=68.78  Aligned_cols=44  Identities=18%  Similarity=0.335  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      .|+++|+++++|.|..|++.|.+...|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.7e-12  Score=68.34  Aligned_cols=41  Identities=22%  Similarity=0.476  Sum_probs=25.0

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      |+++|+++++|.|.+|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            44455566666666666666666666666666666666655

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4e-12  Score=68.93  Aligned_cols=44  Identities=20%  Similarity=0.326  Sum_probs=39.4

Q ss_pred             HHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        131 RHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      .|+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36678889999999999999999999999999999999999964

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.6e-12  Score=68.00  Aligned_cols=40  Identities=20%  Similarity=0.380  Sum_probs=19.6

Q ss_pred             HhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        133 IKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      +++|++++||.|+.|++.|...+.|..|+++|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             SCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             ccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            3444444455555555555555555555544544444444

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.4e-12  Score=69.11  Aligned_cols=43  Identities=23%  Similarity=0.383  Sum_probs=40.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3677899999999999999999999999999999999999884

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=68.62  Aligned_cols=44  Identities=18%  Similarity=0.415  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.7e-12  Score=67.59  Aligned_cols=40  Identities=28%  Similarity=0.364  Sum_probs=20.3

Q ss_pred             HhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        133 IKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      +++|+++++|.|+.|++.|...+.|..|+++|+++++|.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            4 GSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             ccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            3444455555555555555555555555555555555544

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-12  Score=69.62  Aligned_cols=44  Identities=18%  Similarity=0.360  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.3e-12  Score=67.81  Aligned_cols=41  Identities=20%  Similarity=0.405  Sum_probs=29.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      |+++|+++++|.|+.|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45567777777777777777777777777777777777665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3.8e-12  Score=69.06  Aligned_cols=44  Identities=27%  Similarity=0.489  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.3e-12  Score=68.79  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=39.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6778899999999999999999999999999999999999964

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.3e-12  Score=68.78  Aligned_cols=43  Identities=28%  Similarity=0.412  Sum_probs=39.0

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            6678899999999999999999999999999999999999864

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.4e-12  Score=69.21  Aligned_cols=44  Identities=18%  Similarity=0.456  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=68.75  Aligned_cols=43  Identities=23%  Similarity=0.342  Sum_probs=39.3

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6778899999999999999999999999999999999999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.8e-12  Score=68.62  Aligned_cols=44  Identities=25%  Similarity=0.303  Sum_probs=39.4

Q ss_pred             HHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        131 RHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      .|+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36678899999999999999999999999999999999999874

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=3.8e-12  Score=69.02  Aligned_cols=44  Identities=14%  Similarity=0.173  Sum_probs=41.0

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|+.|++.|.+...|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.8e-12  Score=69.02  Aligned_cols=43  Identities=26%  Similarity=0.389  Sum_probs=38.8

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6678889999999999999999999999999999999999864

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.2e-12  Score=68.85  Aligned_cols=43  Identities=19%  Similarity=0.301  Sum_probs=40.4

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5678999999999999999999999999999999999999875

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6e-12  Score=68.24  Aligned_cols=43  Identities=23%  Similarity=0.315  Sum_probs=39.4

Q ss_pred             HHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        131 RHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      .|+++|++++||.|+.|++.|...+.|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3677889999999999999999999999999999999999986

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4e-12  Score=68.20  Aligned_cols=43  Identities=19%  Similarity=0.371  Sum_probs=40.2

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                      +|+++|.++++|.|..|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4677899999999999999999999999999999999999884

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=68.71  Aligned_cols=43  Identities=23%  Similarity=0.312  Sum_probs=38.8

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|+++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6678889999999999999999999999999999999999864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.4e-12  Score=68.54  Aligned_cols=41  Identities=27%  Similarity=0.412  Sum_probs=22.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      |+++|+++++|.|.+|++.|.+...|..|+++|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            34445555555555555555555555555555555555554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.2e-12  Score=67.42  Aligned_cols=41  Identities=22%  Similarity=0.472  Sum_probs=26.4

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      |+++|.++++|.|..|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            34456666666666666666666666666666666666654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=5e-12  Score=68.54  Aligned_cols=43  Identities=26%  Similarity=0.412  Sum_probs=40.4

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            5678999999999999999999999999999999999999875

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.6e-12  Score=68.35  Aligned_cols=43  Identities=19%  Similarity=0.288  Sum_probs=38.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5677899999999999999999999999999999999999864

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.5e-12  Score=69.16  Aligned_cols=44  Identities=23%  Similarity=0.415  Sum_probs=41.1

Q ss_pred             HHHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        159 RHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       159 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999875

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.1e-12  Score=68.88  Aligned_cols=43  Identities=26%  Similarity=0.359  Sum_probs=39.0

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999864

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.5e-12  Score=68.72  Aligned_cols=43  Identities=14%  Similarity=0.098  Sum_probs=40.5

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6678999999999999999999999999999999999999875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.5e-12  Score=69.20  Aligned_cols=41  Identities=24%  Similarity=0.322  Sum_probs=21.1

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      +|.++++|.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555444

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.6e-12  Score=68.34  Aligned_cols=43  Identities=23%  Similarity=0.346  Sum_probs=39.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999863

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.3e-12  Score=68.84  Aligned_cols=43  Identities=23%  Similarity=0.398  Sum_probs=38.6

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|++|++.|.....|.+|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5677889999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.4e-12  Score=68.42  Aligned_cols=43  Identities=21%  Similarity=0.435  Sum_probs=38.9

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.5e-12  Score=68.02  Aligned_cols=42  Identities=26%  Similarity=0.354  Sum_probs=38.6

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            677889999999999999999999999999999999999885

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.9e-12  Score=68.98  Aligned_cols=43  Identities=23%  Similarity=0.407  Sum_probs=40.5

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|+.
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            6678999999999999999999999999999999999999875

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5e-12  Score=67.83  Aligned_cols=43  Identities=28%  Similarity=0.442  Sum_probs=38.6

Q ss_pred             HHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        131 RHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      .|+++|+++++|.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3667889999999999999999999999999999999999885

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.19  E-value=7.9e-12  Score=66.31  Aligned_cols=39  Identities=21%  Similarity=0.400  Sum_probs=20.1

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      ++|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            344455555555555555555555555555555555544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.4e-12  Score=68.42  Aligned_cols=43  Identities=23%  Similarity=0.321  Sum_probs=39.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999863

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=5.7e-12  Score=67.63  Aligned_cols=41  Identities=27%  Similarity=0.568  Sum_probs=21.9

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      |+++|.++++|.|..|++.|.+...|..|+++|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            34445555555555555555555555555555555555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.18  E-value=7.2e-12  Score=67.92  Aligned_cols=43  Identities=23%  Similarity=0.388  Sum_probs=40.3

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5678999999999999999999999999999999999999875

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.9e-12  Score=69.00  Aligned_cols=43  Identities=19%  Similarity=0.357  Sum_probs=40.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            6678999999999999999999999999999999999999875

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=7.6e-12  Score=67.12  Aligned_cols=42  Identities=19%  Similarity=0.299  Sum_probs=38.6

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            667889999999999999999999999999999999999885

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.18  E-value=5.6e-12  Score=66.91  Aligned_cols=41  Identities=20%  Similarity=0.395  Sum_probs=38.4

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      |+++|.++++|.|..|++.|.+.+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45678999999999999999999999999999999999986

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.8e-12  Score=67.57  Aligned_cols=40  Identities=23%  Similarity=0.397  Sum_probs=22.1

Q ss_pred             HHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        161 KDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       161 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      +++|+++++|.|..|+++|.+...|..|+++|.+++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            3445555555555555555555555555555555555543

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.3e-12  Score=67.75  Aligned_cols=43  Identities=16%  Similarity=0.346  Sum_probs=40.4

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhh-hcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYK-SHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|..|++.|.....|..|++ +|.+++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            6678999999999999999999999999999 999999999875

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=6.1e-12  Score=66.80  Aligned_cols=41  Identities=27%  Similarity=0.430  Sum_probs=37.5

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      |+++|.+++||.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56778899999999999999999999999999999999987

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.3e-12  Score=78.69  Aligned_cols=67  Identities=22%  Similarity=0.284  Sum_probs=59.5

Q ss_pred             hhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhccccc
Q psy11591        127 SNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       127 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      ..|..|++.+.+++++.|+.|++.|. .+.|..|. .+.+++|+.|+.|++.|. ...|..|+++|.+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            35667888899999999999999995 88999999 899999999999999876 699999999998875

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.4e-12  Score=66.98  Aligned_cols=41  Identities=22%  Similarity=0.334  Sum_probs=37.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      |+++|++++||.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56678899999999999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=7.5e-12  Score=67.84  Aligned_cols=41  Identities=24%  Similarity=0.385  Sum_probs=22.4

Q ss_pred             HHHcCCCCcccccccccccCchhHHHHHhhhccc-ccCCCCC
Q psy11591        161 KDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSM-FIPPEQF  201 (220)
Q Consensus       161 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~~~  201 (220)
                      +++|.++++|.|..|++.|.+...|..|+++|++ ++||.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3445555555555555555555555555555555 5555543

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.1e-12  Score=67.93  Aligned_cols=43  Identities=16%  Similarity=0.286  Sum_probs=40.2

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      |+++|.++++|.|.+|++.|.....|..|+++|.+++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            5678999999999999999999999999999999999999875

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.9e-12  Score=67.74  Aligned_cols=43  Identities=23%  Similarity=0.348  Sum_probs=39.0

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6678899999999999999999999999999999999999863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.8e-12  Score=67.19  Aligned_cols=41  Identities=22%  Similarity=0.349  Sum_probs=37.3

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      |+++|++++||.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56778899999999999999999999999999999999887

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=8.2e-12  Score=67.68  Aligned_cols=43  Identities=21%  Similarity=0.428  Sum_probs=38.7

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCC-CCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNS-VNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  174 (220)
                      |+++|.+++||.|+.|++.|...+.|..|+++|++ +++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778899999999999999999999999999999 99999863

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.2e-11  Score=65.95  Aligned_cols=40  Identities=18%  Similarity=0.240  Sum_probs=25.1

Q ss_pred             HcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        163 THNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       163 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +|+++++|.|..|++.|.+...|..|+++|++++||.|+.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4556666666666666666666666666666666666653

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1e-11  Score=66.61  Aligned_cols=39  Identities=21%  Similarity=0.292  Sum_probs=20.4

Q ss_pred             HHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        162 DTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       162 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      ++|.++++|.|.+|++.|.....|..|+++|.+++||.|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            344455555555555555555555555555555555544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.3e-11  Score=66.24  Aligned_cols=42  Identities=19%  Similarity=0.267  Sum_probs=37.7

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |+++|.++++|.|+.|++.|...+.|..|+++|+++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            456788999999999999999999999999999999999884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.9e-12  Score=67.55  Aligned_cols=43  Identities=21%  Similarity=0.354  Sum_probs=37.6

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4567888999999999999999999999999999999998863

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.5e-12  Score=67.83  Aligned_cols=43  Identities=21%  Similarity=0.327  Sum_probs=38.5

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      |+++|.++++|.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5678889999999999999999999999999999999999863

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.8e-11  Score=65.61  Aligned_cols=39  Identities=21%  Similarity=0.405  Sum_probs=19.5

Q ss_pred             HHHcCCCCcccccccccccCchhHHHHHhhhcccccCCC
Q psy11591        161 KDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPE  199 (220)
Q Consensus       161 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  199 (220)
                      +++|+++++|.|.+|++.|.+...|..|+++|++++||.
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            4 GSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            344444555555555555555555555555555555444

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.5e-11  Score=66.01  Aligned_cols=42  Identities=26%  Similarity=0.343  Sum_probs=39.5

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            678899999999999999999999999999999999999874

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7.1e-12  Score=67.94  Aligned_cols=43  Identities=19%  Similarity=0.297  Sum_probs=38.7

Q ss_pred             HHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        131 RHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      .|+++|++++||.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667888999999999999999999999999999999999986

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=7.2e-12  Score=67.21  Aligned_cols=41  Identities=24%  Similarity=0.440  Sum_probs=22.5

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      |+++|+++++|.|.+|++.|.+...|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            34445555555555555555555555555555555555554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=5.3e-11  Score=66.80  Aligned_cols=44  Identities=25%  Similarity=0.493  Sum_probs=38.8

Q ss_pred             CCcceecCcCccccCChhhHHHHHh-hhcCCCceeCCccccccCC
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIK-THTDNSLYICEICGKDFGT  153 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  153 (220)
                      +++||.|.+|++.|.....|..|++ +|.+++||.|++|++.|.+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4678999999999999999999987 8999999999999999875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.3e-11  Score=66.50  Aligned_cols=42  Identities=24%  Similarity=0.403  Sum_probs=29.1

Q ss_pred             hhhcCCCceeCC--ccccccCCHHHHHHHHHHcCCCCccccccc
Q psy11591        134 KTHTDNSLYICE--ICGKDFGTARYLKRHKDTHNSVNTFVCEVC  175 (220)
Q Consensus       134 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  175 (220)
                      ++|+++++|.|.  .|++.|...+.|..|+++|++++||.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456666777776  677777777777777777777777777665

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=4.6e-11  Score=63.68  Aligned_cols=38  Identities=24%  Similarity=0.381  Sum_probs=18.1

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |+++++|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            34444444444444444444444444444444444443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=9.2e-12  Score=66.78  Aligned_cols=42  Identities=29%  Similarity=0.413  Sum_probs=38.2

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            667889999999999999999999999999999999999884

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=65.90  Aligned_cols=37  Identities=22%  Similarity=0.403  Sum_probs=18.0

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      |.++++|.|..|++.|.....|..|+++|++++||.|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            4444444444444444444444444444444444444

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.5e-11  Score=62.98  Aligned_cols=38  Identities=24%  Similarity=0.429  Sum_probs=21.4

Q ss_pred             HcCCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        163 THNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       163 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      +|+++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            34555555555555555555555555555555555544

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.3e-11  Score=64.79  Aligned_cols=42  Identities=19%  Similarity=0.164  Sum_probs=37.3

Q ss_pred             HhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        133 IKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      +++|+++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            356888999999999999999999999999999999999863

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.10  E-value=5.1e-11  Score=63.48  Aligned_cols=41  Identities=15%  Similarity=0.232  Sum_probs=38.0

Q ss_pred             HHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        162 DTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       162 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      ++|+++++|.|..|++.|.....|..|+++|++++||.|+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            35889999999999999999999999999999999999863

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.3e-11  Score=64.39  Aligned_cols=41  Identities=22%  Similarity=0.425  Sum_probs=38.7

Q ss_pred             HHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        162 DTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       162 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      ++|.++++|.|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56889999999999999999999999999999999999875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=5.6e-11  Score=62.59  Aligned_cols=39  Identities=23%  Similarity=0.442  Sum_probs=35.1

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      ++|+++++|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            357889999999999999999999999999999999887

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.6e-11  Score=64.31  Aligned_cols=42  Identities=21%  Similarity=0.319  Sum_probs=39.1

Q ss_pred             HhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccc
Q psy11591        133 IKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEV  174 (220)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  174 (220)
                      .++|+++++|.|++|++.|.....|..|+++|+++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            356889999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.1e-11  Score=63.63  Aligned_cols=42  Identities=21%  Similarity=0.428  Sum_probs=39.1

Q ss_pred             HHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        161 KDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       161 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      +++|+++++|.|.+|++.|.....|..|+++|.+++||.|+.
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            356889999999999999999999999999999999999875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=1.5e-11  Score=76.21  Aligned_cols=60  Identities=20%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             HhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhccccc
Q psy11591        133 IKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       133 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      .++|++++||.|++|++.|...+.|..|+++|++++||.|..|.    ....|..|+++|.+..
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGAF   76 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCSS
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccccc
Confidence            45689999999999999999999999999999999999998765    4555778888887744

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1.6e-10  Score=63.05  Aligned_cols=40  Identities=20%  Similarity=0.453  Sum_probs=35.3

Q ss_pred             CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCcccc
Q psy11591        110 NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGK  149 (220)
Q Consensus       110 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  149 (220)
                      .+++|.|.+|++.|.....|..|+++|++++||.|++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4678899999999999999999999999999999999975

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=1.9e-10  Score=61.78  Aligned_cols=41  Identities=22%  Similarity=0.402  Sum_probs=38.4

Q ss_pred             HcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCC
Q psy11591        163 THNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPG  203 (220)
Q Consensus       163 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~  203 (220)
                      .|+++++|.|..|++.|.....|..|+++|++++++.|+..
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            58899999999999999999999999999999999998764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.98  E-value=3.5e-10  Score=58.76  Aligned_cols=36  Identities=17%  Similarity=0.342  Sum_probs=21.9

Q ss_pred             CCCCcccccccccccCchhHHHHHhhhcccccCCCC
Q psy11591        165 NSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQ  200 (220)
Q Consensus       165 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  200 (220)
                      +++++|.|..|++.|...+.|..|+++|.+++|+.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            455566666666666666666666666666665553

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=62.84  Aligned_cols=42  Identities=24%  Similarity=0.410  Sum_probs=38.9

Q ss_pred             HHHcCCCCccccc--ccccccCchhHHHHHhhhcccccCCCCCC
Q psy11591        161 KDTHNSVNTFVCE--VCNTGFKVKKHLTQHYKSHSMFIPPEQFP  202 (220)
Q Consensus       161 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~  202 (220)
                      .++|+++++|.|.  .|++.|.....|..|+++|.+++||.|..
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4578899999998  89999999999999999999999999875

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.94  E-value=1.8e-11  Score=70.84  Aligned_cols=50  Identities=16%  Similarity=0.377  Sum_probs=37.0

Q ss_pred             hHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHH
Q psy11591        104 NHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARY  156 (220)
Q Consensus       104 ~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  156 (220)
                      .|++.| +++||.|+.|++.|...+.|.   ++|++++||.|+.|++.|....+
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            345556 567788888888887777665   67888888888888888876544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.92  E-value=1e-09  Score=56.91  Aligned_cols=37  Identities=22%  Similarity=0.415  Sum_probs=31.6

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCCCcccc
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVC  172 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  172 (220)
                      |+++++|.|+.|++.|...+.|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4678889999999999999999999999999888865

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.90  E-value=7.2e-10  Score=55.93  Aligned_cols=33  Identities=18%  Similarity=0.360  Sum_probs=19.8

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhccccc
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      |+++++|.|..|++.|.+...|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            455556666666666666666666666665554

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.90  E-value=4e-10  Score=57.71  Aligned_cols=35  Identities=26%  Similarity=0.572  Sum_probs=21.7

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhccc
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      |+++|.+++||.|+.|++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            34456666666666666666666666666666654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.89  E-value=8.9e-10  Score=55.62  Aligned_cols=34  Identities=26%  Similarity=0.599  Sum_probs=21.4

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhcccccC
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIP  197 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  197 (220)
                      |.++++|.|..|++.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4556666666666666666666666666665543

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=3.6e-10  Score=57.90  Aligned_cols=34  Identities=21%  Similarity=0.496  Sum_probs=20.6

Q ss_pred             HcCCCCcccccccccccCchhHHHHHhhhccccc
Q psy11591        163 THNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       163 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      +|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            3555566666666666666666666666666554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=3.3e-09  Score=61.14  Aligned_cols=38  Identities=21%  Similarity=0.473  Sum_probs=19.8

Q ss_pred             CCCCcccccc--cccccCchhHHHHHh-hhcccccCCCCCC
Q psy11591        165 NSVNTFVCEV--CNTGFKVKKHLTQHY-KSHSMFIPPEQFP  202 (220)
Q Consensus       165 ~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~~~  202 (220)
                      ++++||.|..  |+++|...+.|..|+ ++|++++|+-|.+
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4455555543  555555555555554 3555555555444

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=2e-09  Score=62.05  Aligned_cols=39  Identities=21%  Similarity=0.180  Sum_probs=34.8

Q ss_pred             hcCCCceeCCc--cccccCCHHHHHHHH-HHcCCCCcccccc
Q psy11591        136 HTDNSLYICEI--CGKDFGTARYLKRHK-DTHNSVNTFVCEV  174 (220)
Q Consensus       136 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  174 (220)
                      ..+++||.|+.  |+++|...+.|.+|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            57899999975  999999999999997 6899999999865

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.4e-09  Score=55.67  Aligned_cols=36  Identities=25%  Similarity=0.551  Sum_probs=31.4

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHHHHHcCCCCc
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVNT  169 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  169 (220)
                      ++|+++++|.|+.|++.|...+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            457888999999999999999999999999988764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.82  E-value=1.5e-09  Score=55.51  Aligned_cols=36  Identities=22%  Similarity=0.415  Sum_probs=32.1

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      |+++|++++||.|+.|++.|...+.|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            567889999999999999999999999999998764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.6e-10  Score=68.46  Aligned_cols=64  Identities=19%  Similarity=0.264  Sum_probs=47.6

Q ss_pred             HHhHHHHh-CCcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        102 LYNHKFTH-NDIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       102 l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      |..|+..+ +.+++.|..|++.|. ...|..|. .+.+++|+.|+.|++.|.. ..|..|++++.++.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            34455545 667788888888884 77888888 7888888888888887764 78888888777653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.81  E-value=4e-09  Score=53.05  Aligned_cols=34  Identities=24%  Similarity=0.468  Sum_probs=29.6

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCCCc
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNT  169 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  169 (220)
                      |+++++|.|+.|++.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6788899999999999999999999999888764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.79  E-value=4.8e-09  Score=52.82  Aligned_cols=34  Identities=24%  Similarity=0.485  Sum_probs=29.6

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCCCc
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNT  169 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  169 (220)
                      |.++++|.|+.|++.|...+.|.+|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6788899999999999999999999999888764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.77  E-value=4.7e-09  Score=52.18  Aligned_cols=30  Identities=27%  Similarity=0.578  Sum_probs=17.4

Q ss_pred             cccccccccccCchhHHHHHhhhcccccCC
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHSMFIPP  198 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  198 (220)
                      ||.|..|++.|...+.|..|+++|++++|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.6e-09  Score=53.93  Aligned_cols=30  Identities=20%  Similarity=0.353  Sum_probs=14.6

Q ss_pred             cCCCceeCCc--cccccCCHHHHHHHHHHcCC
Q psy11591        137 TDNSLYICEI--CGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       137 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  166 (220)
                      ++++||.|+.  |+++|...+.|.+|+++|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            4444555543  55555555555555554444

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.74  E-value=7.1e-09  Score=51.52  Aligned_cols=32  Identities=22%  Similarity=0.352  Sum_probs=23.7

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCCCccc
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSVNTFV  171 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  171 (220)
                      +||.|+.|++.|...+.|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46777777777777777777777777777664

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.73  E-value=4.6e-09  Score=57.14  Aligned_cols=36  Identities=22%  Similarity=0.496  Sum_probs=25.1

Q ss_pred             HcCCCCcccccccccccCchhHHHHHhh-hcccccCC
Q psy11591        163 THNSVNTFVCEVCNTGFKVKKHLTQHYK-SHSMFIPP  198 (220)
Q Consensus       163 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~  198 (220)
                      +|+++++|.|.+|++.|.....|..|++ +|.++...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            4677788888888888888888888887 77776644

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.73  E-value=5.8e-09  Score=53.59  Aligned_cols=34  Identities=26%  Similarity=0.532  Sum_probs=19.9

Q ss_pred             CCCCccccc--ccccccCchhHHHHHhhhcccccCC
Q psy11591        165 NSVNTFVCE--VCNTGFKVKKHLTQHYKSHSMFIPP  198 (220)
Q Consensus       165 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  198 (220)
                      +++++|.|.  .|++.|...+.|..|+++|++++||
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            455566665  3666666666666666666655554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=5.6e-09  Score=52.96  Aligned_cols=32  Identities=22%  Similarity=0.335  Sum_probs=18.8

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhcccc
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      |.++++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            45555666666666666666666666665543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=7.6e-09  Score=52.44  Aligned_cols=31  Identities=29%  Similarity=0.549  Sum_probs=16.1

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhccc
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      |.++++|.|.+|++.|.+...|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            4444555555555555555555555555544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=4.5e-09  Score=53.67  Aligned_cols=33  Identities=21%  Similarity=0.350  Sum_probs=20.4

Q ss_pred             HcCCCCcccccccccccCch-hHHHHHhhhcccc
Q psy11591        163 THNSVNTFVCEVCNTGFKVK-KHLTQHYKSHSMF  195 (220)
Q Consensus       163 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  195 (220)
                      +|.++++|.|..|++.|... ..|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            35556666666666666666 6666666666554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=6.9e-09  Score=52.54  Aligned_cols=32  Identities=22%  Similarity=0.407  Sum_probs=16.5

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhcccc
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      |.++++|.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44445555555555555555555555555443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.4e-08  Score=52.07  Aligned_cols=32  Identities=25%  Similarity=0.362  Sum_probs=27.7

Q ss_pred             cCCCCcccccc--cccccCchhHHHHHhhhcccc
Q psy11591        164 HNSVNTFVCEV--CNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       164 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +++++||.|+.  |+++|.+.+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            57788999986  999999999999999998875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.2e-08  Score=51.65  Aligned_cols=32  Identities=31%  Similarity=0.495  Sum_probs=19.1

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhcccc
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      |.++++|.|..|++.|.+...|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            44555666666666666666666666665554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=4.2e-09  Score=53.86  Aligned_cols=32  Identities=25%  Similarity=0.433  Sum_probs=16.7

Q ss_pred             HcCCCCcccccccccccCchhHHHHH-hhhccc
Q psy11591        163 THNSVNTFVCEVCNTGFKVKKHLTQH-YKSHSM  194 (220)
Q Consensus       163 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  194 (220)
                      +|++++||.|+.|+++|.+.+.|..| +++|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            34455555555555555555555555 455543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.9e-08  Score=50.86  Aligned_cols=34  Identities=18%  Similarity=0.422  Sum_probs=29.5

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      .|.+++||.|++|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4778899999999999999999999999988753

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=1.6e-08  Score=51.87  Aligned_cols=35  Identities=29%  Similarity=0.608  Sum_probs=29.5

Q ss_pred             hcCCCceeCC--ccccccCCHHHHHHHHHHcCCCCcc
Q psy11591        136 HTDNSLYICE--ICGKDFGTARYLKRHKDTHNSVNTF  170 (220)
Q Consensus       136 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  170 (220)
                      |++++||.|+  .|++.|...+.|.+|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4678889998  4999999999999999888888876

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.7e-08  Score=51.04  Aligned_cols=34  Identities=26%  Similarity=0.440  Sum_probs=28.9

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      .|.+++||.|+.|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4678889999999999999999999998888753

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2.5e-08  Score=50.36  Aligned_cols=34  Identities=18%  Similarity=0.311  Sum_probs=29.1

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      +|.+++||.|+.|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4678889999999999999999999999888753

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.6e-08  Score=51.15  Aligned_cols=30  Identities=40%  Similarity=0.700  Sum_probs=15.3

Q ss_pred             CCCCcccccccccccCchhHHHHHhhhccc
Q psy11591        165 NSVNTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       165 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      .++++|.|..|++.|.....|..|+++|++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            344455555555555555555555555544

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.62  E-value=1.6e-08  Score=51.09  Aligned_cols=25  Identities=24%  Similarity=0.611  Sum_probs=16.4

Q ss_pred             cCCCceeCCccccccCCHHHHHHHH
Q psy11591        137 TDNSLYICEICGKDFGTARYLKRHK  161 (220)
Q Consensus       137 ~~~~~~~C~~C~~~f~~~~~l~~H~  161 (220)
                      .+++||.|+.|+++|.+.+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4566666666666666666666666

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.62  E-value=2.9e-09  Score=52.59  Aligned_cols=31  Identities=23%  Similarity=0.513  Sum_probs=26.8

Q ss_pred             CcccccccccccCchhHHHHHhhhcccccCC
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMFIPP  198 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  198 (220)
                      +||.|..|++.|...+.|..|+++|++++|+
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4788999999998889999999999888876

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.6e-08  Score=51.64  Aligned_cols=34  Identities=29%  Similarity=0.531  Sum_probs=29.6

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHH-HHHcCCC
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRH-KDTHNSV  167 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  167 (220)
                      ++|++++||.|+.|++.|...+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467889999999999999999999999 8888764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.6e-08  Score=51.50  Aligned_cols=34  Identities=24%  Similarity=0.353  Sum_probs=28.6

Q ss_pred             hhcCCCceeCCccccccCCH-HHHHHHHHHcCCCC
Q psy11591        135 THTDNSLYICEICGKDFGTA-RYLKRHKDTHNSVN  168 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  168 (220)
                      +|.+++||.|+.|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            57788889999999999998 89999988887753

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=7.8e-08  Score=55.70  Aligned_cols=33  Identities=21%  Similarity=0.392  Sum_probs=19.3

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhccccc
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      +.+++||.|..|++.|.+...|..|+++|+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            344556666666666666666666666665554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=3.7e-08  Score=49.74  Aligned_cols=34  Identities=29%  Similarity=0.594  Sum_probs=28.6

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      .|.++++|.|+.|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            3677888999999999999999999998888763

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=5.4e-08  Score=49.14  Aligned_cols=34  Identities=24%  Similarity=0.517  Sum_probs=28.1

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      .+.++++|.|+.|++.|...+.|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            3567888999999999999999999988888753

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=4.5e-09  Score=64.99  Aligned_cols=46  Identities=15%  Similarity=0.255  Sum_probs=41.2

Q ss_pred             HHHcCCCCcccccccccccCchhHHHHHhhhcccccCCCCCCCCCC
Q psy11591        161 KDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPEQFPGLDP  206 (220)
Q Consensus       161 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~  206 (220)
                      ..+|+++++|.|..|++.|.....|..|+++|++++||.|......
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~   62 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERR   62 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhH
Confidence            4568999999999999999999999999999999999999766543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.53  E-value=4e-08  Score=50.06  Aligned_cols=32  Identities=19%  Similarity=0.447  Sum_probs=17.1

Q ss_pred             cCCCCcccccc--cccccCchhHHHHHhhhcccc
Q psy11591        164 HNSVNTFVCEV--CNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       164 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      |+++++|.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34455555552  555555555555555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.52  E-value=2.4e-08  Score=50.43  Aligned_cols=26  Identities=23%  Similarity=0.430  Sum_probs=24.5

Q ss_pred             cCCCCcccccccccccCchhHHHHHh
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHY  189 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~  189 (220)
                      +.+++||.|+.|+++|.+.+.|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46889999999999999999999998

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.52  E-value=5.8e-08  Score=52.65  Aligned_cols=35  Identities=26%  Similarity=0.521  Sum_probs=27.7

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHH-HcCCCCc
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKD-THNSVNT  169 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~  169 (220)
                      +|++++||.|.+|++.|.....|..|++ +|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3678899999999999999999999998 8887643

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.50  E-value=6.3e-08  Score=46.48  Aligned_cols=28  Identities=18%  Similarity=0.502  Sum_probs=14.9

Q ss_pred             CcccccccccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3455555555555555555555555443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.50  E-value=6.1e-08  Score=46.22  Aligned_cols=28  Identities=32%  Similarity=0.495  Sum_probs=18.6

Q ss_pred             CcccccccccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +||.|+.|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566677777776777777776666654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.49  E-value=4.9e-09  Score=56.74  Aligned_cols=33  Identities=24%  Similarity=0.396  Sum_probs=17.0

Q ss_pred             HcCCCCccccc--ccccccCchhHHHHHhhhcccc
Q psy11591        163 THNSVNTFVCE--VCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       163 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      .|++++||.|.  .|++.|...+.|..|+++|+++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34555555553  4555555555555555555443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.48  E-value=8.1e-08  Score=45.74  Aligned_cols=27  Identities=48%  Similarity=1.008  Sum_probs=16.5

Q ss_pred             cccccccccccCchhHHHHHhhhcccc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            556666666666666666666666544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.48  E-value=8.3e-08  Score=46.04  Aligned_cols=28  Identities=21%  Similarity=0.356  Sum_probs=18.7

Q ss_pred             cccccccccccCchhHHHHHhhhccccc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      +|.|..|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5666667776666666776766666554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.46  E-value=1.2e-07  Score=48.27  Aligned_cols=33  Identities=30%  Similarity=0.558  Sum_probs=27.0

Q ss_pred             hcCCCceeCCc--cccccCCHHHHHHHHHHcCCCC
Q psy11591        136 HTDNSLYICEI--CGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       136 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      |++++||.|.+  |++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            56788888884  8888888888888888887753

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.45  E-value=8.7e-08  Score=45.29  Aligned_cols=26  Identities=31%  Similarity=0.899  Sum_probs=15.8

Q ss_pred             CcccccccccccCchhHHHHHhhhcc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      ++|.|+.|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=1.8e-07  Score=44.80  Aligned_cols=29  Identities=31%  Similarity=0.678  Sum_probs=21.6

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      ++||.|+.|++.|...+.|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35677777777777777777777777764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=1.7e-07  Score=45.84  Aligned_cols=28  Identities=29%  Similarity=0.595  Sum_probs=19.5

Q ss_pred             Cccccc--ccccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCE--VCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567776  6777777777777777777654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.43  E-value=2.1e-08  Score=54.19  Aligned_cols=39  Identities=18%  Similarity=0.271  Sum_probs=32.0

Q ss_pred             HHHHhhhcCCCceeCC--ccccccCCHHHHHHHHHHcCCCC
Q psy11591        130 QRHIKTHTDNSLYICE--ICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       130 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      ..|...|++++||.|+  .|++.|...+.|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445568899999995  69999999999999999998764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.43  E-value=1.5e-07  Score=45.70  Aligned_cols=28  Identities=25%  Similarity=0.597  Sum_probs=18.3

Q ss_pred             Cccccc--ccccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCE--VCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +||.|+  .|++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356665  6666666666666666666654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.41  E-value=1e-07  Score=45.33  Aligned_cols=27  Identities=26%  Similarity=0.519  Sum_probs=14.3

Q ss_pred             cccccccccccCchhHHHHHhhhcccc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            455555555555555555555555443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.40  E-value=1.7e-07  Score=43.79  Aligned_cols=26  Identities=27%  Similarity=0.612  Sum_probs=17.8

Q ss_pred             cccccccccccCchhHHHHHhhhccc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      ||.|..|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46677777777777777777777664

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.40  E-value=1.3e-07  Score=44.94  Aligned_cols=28  Identities=25%  Similarity=0.425  Sum_probs=18.6

Q ss_pred             CcccccccccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3566777777777777777776666654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.77  E-value=3.3e-08  Score=47.24  Aligned_cols=27  Identities=22%  Similarity=0.466  Sum_probs=17.9

Q ss_pred             cccccccccccCchhHHHHHhhhcccc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ||.|..|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            566666666666666666666666654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=1.5e-07  Score=44.07  Aligned_cols=25  Identities=24%  Similarity=0.614  Sum_probs=12.6

Q ss_pred             CcccccccccccCchhHHHHHhhhc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      +||.|..|++.|.+...|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555555444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.38  E-value=1.2e-07  Score=44.45  Aligned_cols=25  Identities=20%  Similarity=0.628  Sum_probs=13.7

Q ss_pred             CcccccccccccCchhHHHHHhhhc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4555555555555555555555544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=4.3e-08  Score=47.18  Aligned_cols=28  Identities=25%  Similarity=0.475  Sum_probs=18.4

Q ss_pred             CcccccccccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +||.|..|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4566666666666666666666666654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.37  E-value=3.1e-07  Score=43.59  Aligned_cols=27  Identities=33%  Similarity=0.801  Sum_probs=19.0

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      ||.|+.|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            567777777777777777777776654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.36  E-value=8.3e-09  Score=50.87  Aligned_cols=31  Identities=26%  Similarity=0.409  Sum_probs=21.1

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCCCcc
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSVNTF  170 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  170 (220)
                      +||.|+.|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3566777777777777777777777766654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.36  E-value=3.5e-07  Score=42.73  Aligned_cols=27  Identities=19%  Similarity=0.460  Sum_probs=19.8

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcC
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  165 (220)
                      ++||.|+.||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            356777777777777777777777663

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.35  E-value=2.3e-07  Score=44.10  Aligned_cols=27  Identities=26%  Similarity=0.394  Sum_probs=17.3

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      ||.|+.|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.34  E-value=3.1e-07  Score=43.30  Aligned_cols=28  Identities=29%  Similarity=0.667  Sum_probs=20.0

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcCC
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      ++||.|+.|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3567777777777777777777776653

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.34  E-value=3e-07  Score=44.08  Aligned_cols=28  Identities=32%  Similarity=0.635  Sum_probs=20.4

Q ss_pred             CcccccccccccCchhHHHHH-hhhcccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQH-YKSHSMF  195 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  195 (220)
                      +||.|+.|++.|.+.+.|..| +++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            367777777777777777777 5777664

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.33  E-value=3e-07  Score=43.98  Aligned_cols=28  Identities=29%  Similarity=0.459  Sum_probs=19.0

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      +|.|+.|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5667777777777777777776666654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=3e-07  Score=43.59  Aligned_cols=28  Identities=39%  Similarity=0.653  Sum_probs=19.1

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3567777777777777777777766654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.31  E-value=2.8e-07  Score=43.13  Aligned_cols=26  Identities=19%  Similarity=0.465  Sum_probs=19.1

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHc
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h  164 (220)
                      ++||.|+.|++.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35677777777777777777777665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=4.7e-07  Score=44.17  Aligned_cols=28  Identities=36%  Similarity=0.616  Sum_probs=19.6

Q ss_pred             CceeCC--ccccccCCHHHHHHHHHHcCCC
Q psy11591        140 SLYICE--ICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       140 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      +||.|+  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567776  6777777777777777777654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.29  E-value=4.7e-07  Score=43.83  Aligned_cols=28  Identities=39%  Similarity=0.800  Sum_probs=19.3

Q ss_pred             CceeCC--ccccccCCHHHHHHHHHHcCCC
Q psy11591        140 SLYICE--ICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       140 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      +||.|+  .|++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356676  6777777777777777777664

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=5.5e-07  Score=52.09  Aligned_cols=41  Identities=22%  Similarity=0.472  Sum_probs=32.9

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCCCccccccccc
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNT  177 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  177 (220)
                      +.+++||.|..|++.|...+.|.+|+++|++.. ..+.+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            567889999999999999999999999998864 34555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.27  E-value=3.1e-07  Score=43.51  Aligned_cols=27  Identities=30%  Similarity=0.420  Sum_probs=16.8

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      ||.|+.|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            566666666666666666666666554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.57  E-value=1.3e-07  Score=45.11  Aligned_cols=28  Identities=32%  Similarity=0.536  Sum_probs=19.5

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3567777777777777777777776654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.53  E-value=1.6e-07  Score=45.09  Aligned_cols=28  Identities=29%  Similarity=0.627  Sum_probs=20.0

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5677777777777777777777776654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.53  E-value=1.6e-07  Score=43.55  Aligned_cols=24  Identities=33%  Similarity=0.791  Sum_probs=14.8

Q ss_pred             cccccccccccCchhHHHHHhhhc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      ||.|+.|++.|.+.+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            566666666666666666666554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.22  E-value=6.5e-07  Score=41.67  Aligned_cols=26  Identities=31%  Similarity=0.733  Sum_probs=16.0

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcCC
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      ||.|+.|++.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35666666666666666666666654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.13  E-value=8.3e-07  Score=42.41  Aligned_cols=27  Identities=30%  Similarity=0.710  Sum_probs=17.2

Q ss_pred             ceeCCccccccCCHHHHHHH-HHHcCCC
Q psy11591        141 LYICEICGKDFGTARYLKRH-KDTHNSV  167 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~  167 (220)
                      ||.|+.|++.|...+.|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4566554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.39  E-value=3.6e-07  Score=42.25  Aligned_cols=25  Identities=40%  Similarity=0.780  Sum_probs=17.5

Q ss_pred             CceeCCccccccCCHHHHHHHHHHc
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h  164 (220)
                      +||.|+.||+.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3567777777777777777776665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.08  E-value=1.5e-06  Score=41.07  Aligned_cols=25  Identities=32%  Similarity=0.800  Sum_probs=13.8

Q ss_pred             ccccc--ccccccCchhHHHHHhhhcc
Q psy11591        169 TFVCE--VCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       169 ~~~C~--~C~~~f~~~~~l~~H~~~h~  193 (220)
                      +|.|.  .|++.|.+.+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  55555555555555555554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.98  E-value=4.2e-06  Score=39.41  Aligned_cols=25  Identities=44%  Similarity=1.034  Sum_probs=17.7

Q ss_pred             ceeCC--ccccccCCHHHHHHHHHHcC
Q psy11591        141 LYICE--ICGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       141 ~~~C~--~C~~~f~~~~~l~~H~~~h~  165 (220)
                      +|.|+  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56777  77777777777777777665

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.74  E-value=5.3e-05  Score=43.38  Aligned_cols=46  Identities=20%  Similarity=0.316  Sum_probs=25.4

Q ss_pred             cccccCCHHHHHHHHH-HcCCCC------ccccc--ccccccCchhHHHHHhhhc
Q psy11591        147 CGKDFGTARYLKRHKD-THNSVN------TFVCE--VCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       147 C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  192 (220)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|+..+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            5555555555555552 444333      46664  5666666666666666543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.56  E-value=0.00011  Score=42.08  Aligned_cols=47  Identities=23%  Similarity=0.338  Sum_probs=28.7

Q ss_pred             cchhhcCChhHHHHHHhhhcCCCC------ccccc--ccccccCChhHHHHHHhh
Q psy11591         34 VCSKSFRNRGKLNVHYKRVHERIR------THQCN--HCGRAFSDKSNLTVHIRT   80 (220)
Q Consensus        34 ~C~~~~~~~~~l~~H~~~~h~~~~------~~~C~--~C~~~~~~~~~l~~h~~~   80 (220)
                      .|++.|.+...|..|+...|.+.+      +|.|.  .|+..+.....|..|++.
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            366666666666666655565443      56665  466666666666666654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.11  E-value=0.00041  Score=48.05  Aligned_cols=106  Identities=15%  Similarity=0.266  Sum_probs=67.9

Q ss_pred             cCchhhhhcCCHHHHHhH--HHHhCCcceec--CcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHH
Q psy11591         88 MCELCGAEFAQWATLYNH--KFTHNDIKFKC--NYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus        88 ~C~~C~~~f~~~~~l~~h--~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      .|+.|+..+.....+...  .+.-......|  ..|+..+. ...+..|.. .-.-.+..|+.|+..+ ....|..|...
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~  131 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILK  131 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhh
Confidence            677777655442111000  01112345667  35776654 557777863 3455678899998877 55678889877


Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhcccccC
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIP  197 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  197 (220)
                      .-..++-.|+.|+..+ ....|..|..++.|+.+
T Consensus       132 ~C~~r~~~C~~C~~~~-~~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          132 DCPRRQVSCDNCAASM-AFEDKEIHDQNCPLALE  164 (170)
T ss_dssp             TCTTCEEECTTTCCEE-EGGGHHHHHTTCCC---
T ss_pred             hCCCCCeECCCCCCcc-CHHHHHhHHHhCcChhh
Confidence            7777888899998876 56788899988887754

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.87  E-value=0.00043  Score=47.94  Aligned_cols=108  Identities=12%  Similarity=0.213  Sum_probs=71.9

Q ss_pred             cccccccccCChhHHH-HHHhhcCCCCcccC--chhhhhcCCHHHHHhHHHHhCCcceecCcCccccCChhhHHHHHhhh
Q psy11591         60 QCNHCGRAFSDKSNLT-VHIRTHTDEKKYMC--ELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNNPSNLQRHIKTH  136 (220)
Q Consensus        60 ~C~~C~~~~~~~~~l~-~h~~~~~~~~~~~C--~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  136 (220)
                      .|+.|...+.....+. .-+..........|  ..|+..+. ...+..|...-.-.+..|+.|+..+ ....|..|....
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~  132 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKD  132 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHT
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhh
Confidence            7999887765431100 00111112344566  45665544 4456788755567788999999887 577899999888


Q ss_pred             cCCCceeCCccccccCCHHHHHHHHHHcCCCCcc
Q psy11591        137 TDNSLYICEICGKDFGTARYLKRHKDTHNSVNTF  170 (220)
Q Consensus       137 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  170 (220)
                      -+.++..|+.|+..+.. ..|..|..++.|+.++
T Consensus       133 C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          133 CPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             CTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             CCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            88899999999987754 5778999988887643

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.86  E-value=0.0012  Score=43.38  Aligned_cols=76  Identities=22%  Similarity=0.374  Sum_probs=49.6

Q ss_pred             CcceecCcCccccCChhhHHHHHh--hhcCC-CceeCC------ccccccCCHHHHHHHHHHcCCCCcccccccccccCc
Q psy11591        111 DIKFKCNYCEKVYNNPSNLQRHIK--THTDN-SLYICE------ICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKV  181 (220)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~--~h~~~-~~~~C~------~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  181 (220)
                      ..++.|.+|+..|.+.+.+..|..  .|... +.+.+.      .=++.+....    +.....+...|.|.+|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            357899999999999999999983  34321 112111      0012222111    1123455678999999999999


Q ss_pred             hhHHHHHhh
Q psy11591        182 KKHLTQHYK  190 (220)
Q Consensus       182 ~~~l~~H~~  190 (220)
                      ...|..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999974

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.77  E-value=0.00031  Score=45.47  Aligned_cols=30  Identities=20%  Similarity=0.334  Sum_probs=20.7

Q ss_pred             HHcCCCCcccccccccccCchhHHHHHhhh
Q psy11591        162 DTHNSVNTFVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       162 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      ..++|+++|.|..|++.|.+...|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            345666777777777777777777777644

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.33  E-value=0.0007  Score=43.79  Aligned_cols=30  Identities=23%  Similarity=0.341  Sum_probs=26.0

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHHHHH
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      ..++|+++|.|..|++.|.+.+.|..|.++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            457888999999999999999999999764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.27  E-value=0.0066  Score=31.55  Aligned_cols=25  Identities=28%  Similarity=0.535  Sum_probs=13.5

Q ss_pred             CcccccccccccCchhHHHHHhhhc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      .+|.|+.|+..|.....|+.||+-.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            3455555555555555555555533

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.16  E-value=0.0034  Score=32.63  Aligned_cols=24  Identities=25%  Similarity=0.433  Sum_probs=20.0

Q ss_pred             CceeCCccccccCCHHHHHHHHHH
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      .+|.|+.|+..|.....|+.|++-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            568888888888888888888873

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.88  E-value=0.0099  Score=38.89  Aligned_cols=75  Identities=13%  Similarity=0.248  Sum_probs=50.5

Q ss_pred             CCcccCchhhhhcCCHHHHHhHH--HHhCC--cceecCc------CccccCChhhHHHHHhhhcCCCceeCCccccccCC
Q psy11591         84 EKKYMCELCGAEFAQWATLYNHK--FTHND--IKFKCNY------CEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGT  153 (220)
Q Consensus        84 ~~~~~C~~C~~~f~~~~~l~~h~--~~~~~--~~~~C~~------C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  153 (220)
                      .+++.|..|+..|.+.+.+..|.  ..|..  +.+.+..      -+..+....    +.....+...|.|..|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            36789999999999999999997  44521  2222210      011221110    1123456778999999999999


Q ss_pred             HHHHHHHHH
Q psy11591        154 ARYLKRHKD  162 (220)
Q Consensus       154 ~~~l~~H~~  162 (220)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999975

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.67  E-value=0.025  Score=27.45  Aligned_cols=28  Identities=32%  Similarity=0.584  Sum_probs=22.7

Q ss_pred             CcccccchhhcCChhHHHHHHhhhcCCC
Q psy11591         29 PHVCHVCSKSFRNRGKLNVHYKRVHERI   56 (220)
Q Consensus        29 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~   56 (220)
                      .|.|+.|-+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4788888888888888888887777654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.08  E-value=0.1  Score=25.27  Aligned_cols=24  Identities=33%  Similarity=0.606  Sum_probs=15.1

Q ss_pred             ceeCCccccccCCHHHHHHHHHHc
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h  164 (220)
                      .|.||.|.+.+.+...|..|....
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhc
Confidence            366666666666666666665543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.63  E-value=0.13  Score=24.99  Aligned_cols=24  Identities=25%  Similarity=0.472  Sum_probs=17.8

Q ss_pred             CCcccccccccccCchhHHHHHhh
Q psy11591        167 VNTFVCEVCNTGFKVKKHLTQHYK  190 (220)
Q Consensus       167 ~~~~~C~~C~~~f~~~~~l~~H~~  190 (220)
                      ..++.|..|+-+|.....+..|++
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhe
Confidence            345678888888888888887765

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=89.65  E-value=0.17  Score=29.57  Aligned_cols=46  Identities=17%  Similarity=0.512  Sum_probs=29.5

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHH
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQH  188 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  188 (220)
                      -|.|..||..++- ..|..|.....+...|.|-.|++.|.. ...+.|
T Consensus        10 ~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A           10 FFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             EEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             EEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            4677777755543 366777766666566777777777753 444444

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=89.34  E-value=0.27  Score=23.03  Aligned_cols=26  Identities=23%  Similarity=0.593  Sum_probs=21.5

Q ss_pred             cccccchhhcCChhHHHHHHhhhcCC
Q psy11591         30 HVCHVCSKSFRNRGKLNVHYKRVHER   55 (220)
Q Consensus        30 ~~C~~C~~~~~~~~~l~~H~~~~h~~   55 (220)
                      -.|..|.+.+.+..+|..|.+..|..
T Consensus        10 qhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            35899999999999999998777653

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=87.49  E-value=0.29  Score=28.58  Aligned_cols=55  Identities=15%  Similarity=0.334  Sum_probs=25.6

Q ss_pred             ccccccccccCChhHHHHHHhhcCCCCcccCchhhhhcCCHHHHHhHHHHhCCcceecCcCccccCC
Q psy11591         59 HQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKFKCNYCEKVYNN  125 (220)
Q Consensus        59 ~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~  125 (220)
                      ..||.||..+.+...+.+.+..         ..-...|.++..+-.-.   .+-.|.|+.||..|..
T Consensus         9 ~~~PlCG~~L~W~eLIeQML~~---------en~~ei~kDr~~Fl~~~---e~F~FkCP~CgEEFyG   63 (95)
T 2k5c_A            9 AKCPICGSPLKWEELIEEMLII---------ENFEEIVKDRERFLAQV---EEFVFKCPVCGEEFYG   63 (95)
T ss_dssp             EECSSSCCEECHHHHHHHSTTC---------STHHHHTTCHHHHHHHH---HHSEEECTTTCCEEET
T ss_pred             ccCCcCCCccCHHHHHHHHHhh---------ccHHHHHhhHHHHHHHH---HHHhhcCCCccHHHhc
Confidence            3577777766654333322211         11234444444333221   2335667777666543

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=86.92  E-value=0.3  Score=28.54  Aligned_cols=42  Identities=21%  Similarity=0.506  Sum_probs=24.5

Q ss_pred             CCcccccccccccCChhHHHHHHhhcCCCCcccCchhhhhcCC
Q psy11591         56 IRTHQCNHCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQ   98 (220)
Q Consensus        56 ~~~~~C~~C~~~~~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~   98 (220)
                      ...|.|..|+.++.. ..+..|...-.+...|.|..|++.|..
T Consensus         8 MV~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~   49 (79)
T 1wjv_A            8 MVFFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG   49 (79)
T ss_dssp             CCEEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG
T ss_pred             eeEEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC
Confidence            345667777766553 456666655544445666666666653

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=86.77  E-value=0.19  Score=30.05  Aligned_cols=25  Identities=36%  Similarity=0.771  Sum_probs=13.5

Q ss_pred             ccccccccccCchhHHHHHhhhcccccC
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKSHSMFIP  197 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  197 (220)
                      ..|-+||+.|..   |.+|+.+++|..|
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             eEecccchhhHH---HHHHHHHccCCCH
Confidence            355566665553   4466666555544

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=86.16  E-value=0.46  Score=28.40  Aligned_cols=29  Identities=38%  Similarity=0.644  Sum_probs=20.6

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCCCccc
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSVNTFV  171 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  171 (220)
                      ....|.+||+.|..   |.+|+.+++|..|..
T Consensus        20 d~iiClecGK~fK~---LkRHL~~~hgltpee   48 (87)
T 2jsp_A           20 DHIVCLECGGSFKS---LKRHLTTHHSMTPEE   48 (87)
T ss_dssp             SCEECTBTCCEESB---HHHHHHHTTCSCHHH
T ss_pred             CceEecccchhhHH---HHHHHHHccCCCHHH
Confidence            34678888888884   568888877766543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=85.33  E-value=0.62  Score=22.63  Aligned_cols=22  Identities=23%  Similarity=0.372  Sum_probs=15.3

Q ss_pred             CCcccccchhhcCChhHHHHHH
Q psy11591         28 RPHVCHVCSKSFRNRGKLNVHY   49 (220)
Q Consensus        28 ~~~~C~~C~~~~~~~~~l~~H~   49 (220)
                      ..+.|..|+-+|.....+..|.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHK   28 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhh
Confidence            3466777777777777777774

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=83.88  E-value=1.1  Score=20.55  Aligned_cols=21  Identities=19%  Similarity=0.316  Sum_probs=12.1

Q ss_pred             eeCCccccccCCHHHHHHHHH
Q psy11591        142 YICEICGKDFGTARYLKRHKD  162 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~  162 (220)
                      +.|++|.........+..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            456666666666655555543

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=82.67  E-value=0.61  Score=27.01  Aligned_cols=42  Identities=21%  Similarity=0.415  Sum_probs=18.5

Q ss_pred             ccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHh
Q psy11591        146 ICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHY  189 (220)
Q Consensus       146 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  189 (220)
                      .|+..+.. ..|..|....-..++..|..|+..+. ...|..|.
T Consensus        22 ~C~~~v~r-~~l~~H~~~~C~~r~v~C~~C~~~~~-~~~l~~H~   63 (76)
T 2yuc_A           22 RCPMKLSR-RDLPAHLQHDCPKRRLKCEFCGCDFS-GEAYESHE   63 (76)
T ss_dssp             CCSCBCCS-SSSTTTTTTSCTTSCCCCSSSCCCCC-HHHHHHTT
T ss_pred             cccHHhhH-hHHHhhCHhhCCCcceECCCCCCccC-HHHHHHHH
Confidence            45444332 23334443333334455555555542 34455554

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=81.18  E-value=0.53  Score=24.49  Aligned_cols=10  Identities=40%  Similarity=1.069  Sum_probs=4.0

Q ss_pred             eecCcCcccc
Q psy11591        114 FKCNYCEKVY  123 (220)
Q Consensus       114 ~~C~~C~~~f  123 (220)
                      |.|..||..+
T Consensus         5 y~C~vCGyvy   14 (46)
T 6rxn_A            5 YVCNVCGYEY   14 (46)
T ss_dssp             EEETTTCCEE
T ss_pred             EECCCCCeEE
Confidence            3344444333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	220
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.003
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.004
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.004
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	8e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	3e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	6e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	2e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.001

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (107), Expect = 8e-08
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 57 RTHQCNHCGRAFSDKSNLTVHIR-THTDEKKYMCEL 91
          + + C  CG+ FS   +L  HI+  HT E+ + C++
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 3e-05
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 25 TGERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCN 62
          +  +P++C  C K F     LN H K+VH   R H+C 
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 2  FKCPQCGALLKNIWSLREHI-MIHTGERPHVCHV 34
          + C  CG        L  HI  +HT ERPH C V
Sbjct: 6  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 114 FKCNYCEKVYNNPSNLQRHIK-THTDNSLYICEI 146
           + C  C K ++ P +L  HIK  HT    + C++
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 2e-07
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 27 ERPHVCHVCSKSFRNRGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTH 81
          ++ + C  C KSF ++ + + H   +H  +R + C  CG+ F  K +L  H++ H
Sbjct: 1  DKLYPCQ-CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 2e-05
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query: 63  HCGRAFSDKSNLTVHIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
            CG++F+ KS    H+  H   + Y C +CG +F     L  H   H
Sbjct: 7   QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 7e-05
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 84  EKKYMCELCGAEFAQWATLYNH-KFTHNDIKFKCNYCEKVYNNPSNLQRHIKTH 136
           +K Y C+ CG  F   +    H         + C  C K +    +L  H+K H
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 8e-05
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 114 FKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH 164
           + C  C K + + S   RH+  H     Y C +CGK F    +L  H   H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 142 YICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH 192
           Y C+ CGK F       RH   H  +  + C VC   FK+K HL  H K H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 42.6 bits (101), Expect = 4e-07
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 57 RTHQCNHCGRAFSDKSNLTVHIRTHTDEK 85
          R+  C  C RAF+ + +L  H R+HT+EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 114 FKCNYCEKVYNNPSNLQRHIKTHT 137
           F C  C + +    +L+RH ++HT
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHT 26

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 5e-07
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 51 RVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEK 85
          R H   + + C+HC + F  K  L +H + + D  
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 9e-06
 Identities = 15/36 (41%), Positives = 17/36 (47%)

Query: 79  RTHTDEKKYMCELCGAEFAQWATLYNHKFTHNDIKF 114
           RTHT EK Y C  C   F Q   L  H   ++D  F
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 5e-07
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)

Query: 58 THQCNH--CGRAFSDKSNLTVHIRTHTDEKKYMCE 90
          +  C    CG++F+ K +L  H++ H+D + Y+CE
Sbjct: 1  SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (100), Expect = 7e-07
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 52 VHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
          +H   + + C  CG+AFS  S L  H R HT E
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 6e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 81  HTDEKKYMCELCGAEFAQWATLYNHKFTH 109
           H+ EK Y C  CG  F++ + L  H+  H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.8 bits (73), Expect = 0.004
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 114 FKCNYCEKVYNNPSNLQRHIKTHT 137
           + C  C K ++  S L +H + HT
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVHT 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (99), Expect = 1e-06
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 23 IHTGERPHVCHVCSKSFRNRGKLNVHYKRVH 53
           H+GE+P+ C++C   F   G + +H  + H
Sbjct: 2  THSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 2e-05
 Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 51 RVHERIRTHQCNHCGRAFSDKSNLTVHI-RTHTDE 84
          R H   + ++C  C   F+    + +HI + HT+ 
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 4e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 79  RTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
           RTH+ EK Y C +C A F Q  T+  H    
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.9 bits (94), Expect = 5e-06
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 57 RTHQCNHCGRAFSDKSNLTVHIRTHT 82
          +  QC  C R FS   +LT HIRTHT
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.8 bits (73), Expect = 0.004
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 114 FKCNYCEKVYNNPSNLQRHIKTHT 137
           F+C  C + ++   +L  HI+THT
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHT 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 8e-06
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHTDEK 85
            C  C + F    +L+ HI+TH ++K
Sbjct: 3  FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 57 RTHQCNH--CGRAFSDKSNLTVHIRTHTDEK 85
          R   C    CG+ F+    L  H RTHT EK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 2e-05
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 50 KRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
          +      R ++C+ CG++FS  S+L+ H RTHT E
Sbjct: 4  EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
                 + ++Y C+ CG  F+  + L  H+ TH
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 3e-05
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 59 HQCNHCGRAFSDKSNLTVHIRTHT 82
          ++C  CG+AFS  S L  H R HT
Sbjct: 3  YKCLECGKAFSQNSGLINHQRIHT 26

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 57 RTHQCNH--CGRAFSDKSNLTVHIRTHTDE 84
          + H+C    C +++S   NL  H+R+HT E
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.2 bits (86), Expect = 6e-05
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 42 RGKLNVHYKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHTDEK 85
          RG ++ + K + ++        C + F  + N+  HI+TH +++
Sbjct: 4  RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 49 YKRVHERIRTHQCNHCGRAFSDKSNLTVHIRTHT 82
            R    I+  QC  C R+FS   +L +H + H 
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 2e-04
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 77  HIRTHTDEKKYMCELCGAEFAQWATLYNHKFTH 109
             R  T  K + C  C   F++   L  H+  H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 20 HIMIHTGERPHVCHVCSKSFRNRGKLNVHYKRVH 53
               TG +P  C  C +SF     L +H ++ H
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALH-RKRH 34

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.9 bits (83), Expect = 1e-04
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 57 RTHQCNHCGRAFSDKSNLTVHIRTHTDE 84
          R   C  C  AF+ K+N   H++ HTD 
Sbjct: 6  RPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (75), Expect = 0.002
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 24 HTGERPHVCHVCSKSFRNRGKLNVHYKRVH 53
           +G+RP VC +C  +F  +     H  +VH
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARH-LKVH 30

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 57 RTHQCNH--CGRAFSDKSNLTVHIRTHT 82
          R + C    C R FS  ++LT HIR HT
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHT 28

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 57 RTHQCNH--CGRAFSDKSNLTVHIRTHTDE 84
          R + C+H  C +AF    +L  H ++H ++
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 2e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)

Query: 57 RTHQCNH--CGRAFSDKSNLTVHIRTHTDE 84
          +  QC    CG+ FS   NL  H+R HT +
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 57 RTHQCNH--CGRAFSDKSNLTVHIRTHT 82
          R + C    C + F+  +NL  HI TH 
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	220
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.73
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.65
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.36
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.35
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.34
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.31
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.3
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.3
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.29
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.28
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.24
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.19
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.19
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.18
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.14
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.14
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.14
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.14
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.13
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.1
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.1
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.04
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.02
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.98
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.97
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.96
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.93
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.9
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.85
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.85
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.81
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.8
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.78
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.64
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.61
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.59
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.56
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.29
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.26
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.22
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.22
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.19
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.18
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.18
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.14
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.1
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.04
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.02
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.0
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.0
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.93
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.86
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.85
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.75
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.73
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.66
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.62
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.53
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.52
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.48
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.47
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.47
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.46
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.44
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.41
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.34
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.29
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.25
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.24
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.24
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.22
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.18
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.14
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.06
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.05
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.0
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.99
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.86
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.8
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.73
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.61
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.52
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.5
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.37
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.3
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.25
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.19
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.06
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.94
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.47
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.33
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.21
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.06
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.99
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.94
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.86
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.79
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.45
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.31
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.23
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.2
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	93.61
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.32
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.31
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.93
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.76
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.31
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.14
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.69
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.69
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	91.13
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.1
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.79
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.42
d1fu9a_	36	U-shaped transcription factor, different fingers {	85.73
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	83.89
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	82.68
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	81.86
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	80.23

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.5e-18  Score=95.90  Aligned_cols=53  Identities=40%  Similarity=0.802  Sum_probs=46.6

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcCCCCcccccccccccCchhHHHHHhhhc
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      |+||.|. ||++|.....|..|+++|++++||.|..||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5788994 9999999999999999999999999999999999999999998876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5.1e-17  Score=89.63  Aligned_cols=53  Identities=32%  Similarity=0.654  Sum_probs=49.4

Q ss_pred             CcceecCcCccccCChhhHHHHHhhhcCCCceeCCccccccCCHHHHHHHHHHc
Q psy11591        111 DIKFKCNYCEKVYNNPSNLQRHIKTHTDNSLYICEICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       111 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  164 (220)
                      ++||.|. ||+.|.....|..|+++|++++||.|+.||++|...+.|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5789994 9999999999999999999999999999999999999999999876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=4.3e-14  Score=71.19  Aligned_cols=36  Identities=17%  Similarity=0.417  Sum_probs=23.5

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhcccc
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      |+.+|++++||.|++||++|...+.|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            555666666666666666666666666666666654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.8e-13  Score=65.99  Aligned_cols=32  Identities=25%  Similarity=0.461  Sum_probs=19.4

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhcccc
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      |+|++||.|.+|+++|.+.+.|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            55666666666666666666666666666553

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.6e-13  Score=67.57  Aligned_cols=35  Identities=34%  Similarity=0.711  Sum_probs=18.4

Q ss_pred             CCceeCCccccccCCHHHHHHHHH-HcCCCCccccc
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKD-THNSVNTFVCE  173 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  173 (220)
                      ++||.|..||++|...+.|.+|++ +|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            345555555555555555555543 45555555554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=7.5e-13  Score=66.39  Aligned_cols=36  Identities=28%  Similarity=0.557  Sum_probs=33.6

Q ss_pred             CCCcccccccccccCchhHHHHHhh-hcccccCCCCC
Q psy11591        166 SVNTFVCEVCNTGFKVKKHLTQHYK-SHSMFIPPEQF  201 (220)
Q Consensus       166 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~  201 (220)
                      .++||.|..||++|...+.|..|++ +|+|++||.|+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4689999999999999999999986 79999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.5e-13  Score=68.34  Aligned_cols=37  Identities=30%  Similarity=0.602  Sum_probs=34.0

Q ss_pred             HHHhhhcCCCceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        131 RHIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       131 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      +|+++|++++||.|++||++|...+.|.+|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4678899999999999999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=9.4e-13  Score=63.44  Aligned_cols=33  Identities=30%  Similarity=0.610  Sum_probs=30.5

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      +|++++||.|.+||++|...+.|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            488999999999999999999999999999885

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=3.9e-13  Score=67.14  Aligned_cols=35  Identities=26%  Similarity=0.572  Sum_probs=23.6

Q ss_pred             HHHHcCCCCcccccccccccCchhHHHHHhhhccc
Q psy11591        160 HKDTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       160 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      |.++|+|++||.|..|+++|.+.+.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            44566777777777777777777777777766653

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=8.1e-13  Score=65.46  Aligned_cols=32  Identities=28%  Similarity=0.612  Sum_probs=17.1

Q ss_pred             HcCCCCcccccccccccCchhHHHHHhhhccc
Q psy11591        163 THNSVNTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       163 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      +|+|++||.|.+|+++|...+.|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            45555555555555555555555555555543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.8e-12  Score=63.47  Aligned_cols=35  Identities=31%  Similarity=0.555  Sum_probs=32.0

Q ss_pred             hhhcCCCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        134 KTHTDNSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       134 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      |+|+|++||.|.+||++|...+.|..|+++|++++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57999999999999999999999999999998753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.19  E-value=4.9e-12  Score=59.13  Aligned_cols=29  Identities=45%  Similarity=0.918  Sum_probs=19.6

Q ss_pred             CcccccccccccCchhHHHHHhhhccccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      +||+|++|+++|...+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46667777777777777777777766654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=3.1e-12  Score=63.78  Aligned_cols=35  Identities=20%  Similarity=0.395  Sum_probs=32.3

Q ss_pred             HHhhhcCCCceeCCccccccCCHHHHHHHHHHcCC
Q psy11591        132 HIKTHTDNSLYICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       132 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      |.|+|++++||.|+.|+++|...+.|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            57889999999999999999999999999999864

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=6.7e-12  Score=61.22  Aligned_cols=31  Identities=29%  Similarity=0.646  Sum_probs=16.8

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhhccc
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      |+|++||+|.+|++.|.+.+.|..|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3455555555555555555555555555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.2e-11  Score=57.66  Aligned_cols=29  Identities=31%  Similarity=0.605  Sum_probs=20.5

Q ss_pred             CcccccccccccCchhHHHHHhhhccccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777664

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=6.4e-12  Score=62.02  Aligned_cols=29  Identities=31%  Similarity=0.511  Sum_probs=14.2

Q ss_pred             hhcCCCceeCCccccccCCHHHHHHHHHH
Q psy11591        135 THTDNSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       135 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      +|+|++||.|++|+++|+..+.|.+|+..
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~   30 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQ   30 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccc
Confidence            34455555555555555555555555433

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=1.8e-11  Score=59.71  Aligned_cols=32  Identities=25%  Similarity=0.531  Sum_probs=29.0

Q ss_pred             hcCCCceeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        136 HTDNSLYICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       136 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      |+|++||.|++|+++|...+.|.+|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68899999999999999999999999999865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.3e-11  Score=60.85  Aligned_cols=34  Identities=18%  Similarity=0.407  Sum_probs=29.7

Q ss_pred             HHcCCCCcccccccccccCchhHHHHHhhhcccc
Q psy11591        162 DTHNSVNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       162 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ++|+|++||.|+.|+++|...+.|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4799999999999999999999999998665543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=7.7e-12  Score=57.70  Aligned_cols=27  Identities=33%  Similarity=0.773  Sum_probs=13.8

Q ss_pred             CcccccccccccCchhHHHHHhhhccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      +||.|++|+++|...+.|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            455555555555555555555555543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=2e-11  Score=56.31  Aligned_cols=28  Identities=29%  Similarity=0.634  Sum_probs=21.9

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcCC
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      |+||.|++|+++|..++.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5778888888888888888888887765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.10  E-value=2.8e-11  Score=56.47  Aligned_cols=29  Identities=31%  Similarity=0.753  Sum_probs=21.8

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      +||.|++|+++|...+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.6e-11  Score=55.64  Aligned_cols=29  Identities=28%  Similarity=0.526  Sum_probs=20.0

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      +||.|++||++|..++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46677777777777777777777777653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=7.2e-11  Score=58.00  Aligned_cols=32  Identities=34%  Similarity=0.844  Sum_probs=17.3

Q ss_pred             eeCCc--cccccCCHHHHHHHHHHcCCCCccccc
Q psy11591        142 YICEI--CGKDFGTARYLKRHKDTHNSVNTFVCE  173 (220)
Q Consensus       142 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  173 (220)
                      |.|++  |+++|...+.|.+|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            44544  555555555555555555555555553

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=6.3e-11  Score=53.16  Aligned_cols=24  Identities=38%  Similarity=0.668  Sum_probs=12.5

Q ss_pred             ceeCCccccccCCHHHHHHHHHHc
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h  164 (220)
                      ||+|.+||++|...+.|.+|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            455555555555555555555544

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.1e-10  Score=52.40  Aligned_cols=26  Identities=23%  Similarity=0.584  Sum_probs=19.4

Q ss_pred             CcccccccccccCchhHHHHHhhhcc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      +||.|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57777777777777777777777763

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=1e-11  Score=65.18  Aligned_cols=32  Identities=22%  Similarity=0.424  Sum_probs=15.7

Q ss_pred             hcCCCceeCCc--cccccCCHHHHHHHHHHcCCC
Q psy11591        136 HTDNSLYICEI--CGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       136 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      |.+++||.|++  |+++|...+.|..|+++|+|+
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            44445555544  555555555555555554444

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.96  E-value=2.2e-11  Score=63.86  Aligned_cols=40  Identities=20%  Similarity=0.337  Sum_probs=33.5

Q ss_pred             HHHHHHHHcCCCCcccccc--cccccCchhHHHHHhhhccccc
Q psy11591        156 YLKRHKDTHNSVNTFVCEV--CNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       156 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      .|..|+ .|++++||.|.+  |+++|...+.|..|+++|+|++
T Consensus         6 ~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            445566 489999999977  9999999999999999999875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.1e-10  Score=56.26  Aligned_cols=32  Identities=38%  Similarity=0.504  Sum_probs=30.1

Q ss_pred             ccccc--cccccCchhHHHHHhhhcccccCCCCC
Q psy11591        170 FVCEV--CNTGFKVKKHLTQHYKSHSMFIPPEQF  201 (220)
Q Consensus       170 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~  201 (220)
                      |.|+.  |++.|.....|.+|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            77876  999999999999999999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=4e-10  Score=52.68  Aligned_cols=28  Identities=21%  Similarity=0.495  Sum_probs=15.6

Q ss_pred             Ccccccc--cccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCEV--CNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +||.|+.  |+++|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3555555  555555555555555555553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=9.5e-10  Score=51.39  Aligned_cols=28  Identities=25%  Similarity=0.481  Sum_probs=21.2

Q ss_pred             CceeCCc--cccccCCHHHHHHHHHHcCCC
Q psy11591        140 SLYICEI--CGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       140 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      +||.|++  |+++|..++.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4677777  777787777777777777764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=4.5e-10  Score=52.62  Aligned_cols=26  Identities=27%  Similarity=0.629  Sum_probs=13.4

Q ss_pred             cccccc--cccccCchhHHHHHhhhccc
Q psy11591        169 TFVCEV--CNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       169 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  194 (220)
                      ||.|+.  |+++|...+.|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            455544  55555555555555555544

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.1e-09  Score=51.19  Aligned_cols=28  Identities=29%  Similarity=0.590  Sum_probs=20.4

Q ss_pred             CceeCCc--cccccCCHHHHHHHHHHcCCC
Q psy11591        140 SLYICEI--CGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       140 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      +||.|++  |+++|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4677766  777777777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.6e-09  Score=51.18  Aligned_cols=29  Identities=24%  Similarity=0.552  Sum_probs=17.1

Q ss_pred             Cccccc--ccccccCchhHHHHHhhhccccc
Q psy11591        168 NTFVCE--VCNTGFKVKKHLTQHYKSHSMFI  196 (220)
Q Consensus       168 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  196 (220)
                      +||.|+  .|+++|...+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            356663  36666666666666666666553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.8e-09  Score=50.96  Aligned_cols=29  Identities=38%  Similarity=0.781  Sum_probs=21.1

Q ss_pred             CceeCC--ccccccCCHHHHHHHHHHcCCCC
Q psy11591        140 SLYICE--ICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       140 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      +||.|+  .|+++|+..+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            467775  37777777777777777777764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=4.4e-09  Score=48.59  Aligned_cols=26  Identities=31%  Similarity=0.713  Sum_probs=13.9

Q ss_pred             cccccc--cccccCchhHHHHHhhhccc
Q psy11591        169 TFVCEV--CNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       169 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  194 (220)
                      ||.|..  |+++|...+.|.+|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            455544  55555555555555555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=1.3e-08  Score=48.19  Aligned_cols=28  Identities=29%  Similarity=0.615  Sum_probs=16.7

Q ss_pred             CCcccccc--cccccCchhHHHHHhhhccc
Q psy11591        167 VNTFVCEV--CNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       167 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  194 (220)
                      ++||.|+.  |+++|...+.|.+|+++|..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            35666655  66666666666666666653

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=6.6e-09  Score=47.99  Aligned_cols=27  Identities=30%  Similarity=0.694  Sum_probs=19.6

Q ss_pred             CceeCCc--cccccCCHHHHHHHHHHcCC
Q psy11591        140 SLYICEI--CGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       140 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  166 (220)
                      +||.|++  |+++|..++.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4677766  77777777777777777764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.59  E-value=1.4e-08  Score=48.01  Aligned_cols=28  Identities=36%  Similarity=0.689  Sum_probs=20.7

Q ss_pred             CCceeCCc--cccccCCHHHHHHHHHHcCC
Q psy11591        139 NSLYICEI--CGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       139 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  166 (220)
                      ++||.|++  |+++|+..+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777766  77777777777777777765

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=2.1e-08  Score=42.47  Aligned_cols=26  Identities=35%  Similarity=0.678  Sum_probs=21.4

Q ss_pred             cccccccccccCchhHHHHHhhhccc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      |..|.+|++.|+.+..|.+|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46788888888888888888888875

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.9e-08  Score=45.86  Aligned_cols=25  Identities=32%  Similarity=0.744  Sum_probs=13.9

Q ss_pred             Ccccccc--cccccCchhHHHHHhhhc
Q psy11591        168 NTFVCEV--CNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       168 ~~~~C~~--C~~~f~~~~~l~~H~~~h  192 (220)
                      +||.|+.  |+++|...+.|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3555544  555555555555555555

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=1.6e-08  Score=46.15  Aligned_cols=26  Identities=38%  Similarity=0.745  Sum_probs=17.2

Q ss_pred             CceeCCc--cccccCCHHHHHHHHHHcC
Q psy11591        140 SLYICEI--CGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       140 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  165 (220)
                      +||.|++  ||++|+.++.|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4666666  7777777777777766664

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=2.8e-07  Score=40.34  Aligned_cols=25  Identities=36%  Similarity=0.862  Sum_probs=12.7

Q ss_pred             CceeCCccccccCCHHHHHHHHHHc
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h  164 (220)
                      +||.|+.||+.|..+....+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555554444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=2.8e-07  Score=40.34  Aligned_cols=27  Identities=26%  Similarity=0.598  Sum_probs=25.2

Q ss_pred             CCcccccccccccCchhHHHHHhhhcc
Q psy11591        167 VNTFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       167 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999884

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=5.1e-07  Score=39.15  Aligned_cols=27  Identities=22%  Similarity=0.436  Sum_probs=11.6

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcCC
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      +||+|..|..+-..++.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            344444444444444444444444443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=4.1e-07  Score=39.47  Aligned_cols=29  Identities=28%  Similarity=0.504  Sum_probs=27.0

Q ss_pred             CCcccccccccccCchhHHHHHhhhcccc
Q psy11591        167 VNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       167 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ++||+|..|.+.-.+.+.|..|++.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999999999999999999974

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=5.1e-07  Score=41.04  Aligned_cols=28  Identities=43%  Similarity=0.780  Sum_probs=13.5

Q ss_pred             eCCccccccCCHHHHHHHHHHcCCCCcc
Q psy11591        143 ICEICGKDFGTARYLKRHKDTHNSVNTF  170 (220)
Q Consensus       143 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~  170 (220)
                      .|..||++|.....|.+|.-.|++++||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4444444444444444444444444444

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=8.3e-07  Score=39.42  Aligned_cols=25  Identities=28%  Similarity=0.740  Sum_probs=13.8

Q ss_pred             ceeCCc--cccccCCHHHHHHHHHHcC
Q psy11591        141 LYICEI--CGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       141 ~~~C~~--C~~~f~~~~~l~~H~~~h~  165 (220)
                      ||.|.+  |++++...++|++|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455544  5555555555555555544

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4.1e-07  Score=40.38  Aligned_cols=29  Identities=31%  Similarity=0.600  Sum_probs=18.9

Q ss_pred             CCcccccccccccCchhHHHHHhhhcccc
Q psy11591        167 VNTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       167 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ++||.|++|...|..+..+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            35666666666666666666666666553

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=6.4e-07  Score=37.84  Aligned_cols=25  Identities=40%  Similarity=0.721  Sum_probs=14.1

Q ss_pred             eeCCccccccCCHHHHHHHHHHcCC
Q psy11591        142 YICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      .+|++|++.|+....|..|++.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            3455555555555555555555543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1e-06  Score=38.01  Aligned_cols=26  Identities=27%  Similarity=0.469  Sum_probs=16.9

Q ss_pred             ccccccccccCchhHHHHHhhhcccc
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ..|..||+.|...+.|.+|+.+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35666666666666666666666653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.6e-06  Score=39.41  Aligned_cols=32  Identities=34%  Similarity=0.512  Sum_probs=29.2

Q ss_pred             CcccccccccccCchhHHHHHhhhcccccCCC
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMFIPPE  199 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  199 (220)
                      +...|..||+.|.+.-.|.+|..+|.+++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            44679999999999999999999999999983

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=2.2e-06  Score=37.99  Aligned_cols=28  Identities=25%  Similarity=0.630  Sum_probs=17.2

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcCC
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      ++||.|++|+..|+.+..+.-|.+.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3566666666666666666666666655

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=3.3e-06  Score=36.79  Aligned_cols=26  Identities=46%  Similarity=0.806  Sum_probs=16.5

Q ss_pred             eeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        142 YICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      |.|++||.....++-|..|.++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            55666666666666666666666654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.8e-06  Score=38.34  Aligned_cols=27  Identities=22%  Similarity=0.566  Sum_probs=24.6

Q ss_pred             Ccccccc--cccccCchhHHHHHhhhccc
Q psy11591        168 NTFVCEV--CNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       168 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  194 (220)
                      +||.|.+  |++++.+.+.|+.|++++||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5899977  99999999999999998875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=5.4e-06  Score=35.56  Aligned_cols=26  Identities=23%  Similarity=0.506  Sum_probs=15.7

Q ss_pred             CceeCCccccccCCHHHHHHHHHHcC
Q psy11591        140 SLYICEICGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       140 ~~~~C~~C~~~f~~~~~l~~H~~~h~  165 (220)
                      +||+|..|+.+...+++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            45666666666666666666666553

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.86  E-value=6.3e-06  Score=34.35  Aligned_cols=24  Identities=29%  Similarity=0.743  Sum_probs=18.8

Q ss_pred             ccccccccccCchhHHHHHhhhcc
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      |.|..|..+|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            577888888888888888887774

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=5.1e-06  Score=35.63  Aligned_cols=27  Identities=26%  Similarity=0.596  Sum_probs=25.2

Q ss_pred             CCcccccccccccCchhHHHHHhhhcc
Q psy11591        167 VNTFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       167 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      .+||.|..|++...+.+.|..|+++|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            379999999999999999999999986

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=6e-06  Score=35.54  Aligned_cols=26  Identities=38%  Similarity=0.686  Sum_probs=18.9

Q ss_pred             eeCCccccccCCHHHHHHHHHHcCCC
Q psy11591        142 YICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      ..|.+||++|..++.|.+|.-.|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46777777777777777777777664

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.5e-05  Score=34.69  Aligned_cols=27  Identities=41%  Similarity=0.747  Sum_probs=24.3

Q ss_pred             eecCcCccccCChhhHHHHHhhhcCCC
Q psy11591        114 FKCNYCEKVYNNPSNLQRHIKTHTDNS  140 (220)
Q Consensus       114 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  140 (220)
                      |.|++||.....++-|.+|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999864

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.73  E-value=1e-05  Score=34.23  Aligned_cols=25  Identities=28%  Similarity=0.450  Sum_probs=13.6

Q ss_pred             cccccccccCchhHHHHHhhhcccc
Q psy11591        171 VCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       171 ~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +|+.|.++|.++-.|..|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4555555555555555555555554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.2e-05  Score=38.58  Aligned_cols=26  Identities=15%  Similarity=0.617  Sum_probs=23.0

Q ss_pred             CCCCcccccccccccCchhHHHHHhh
Q psy11591        165 NSVNTFVCEVCNTGFKVKKHLTQHYK  190 (220)
Q Consensus       165 ~~~~~~~C~~C~~~f~~~~~l~~H~~  190 (220)
                      +|.+||.|..|++.|.+...+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46799999999999999999999963

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.62  E-value=2.7e-05  Score=33.75  Aligned_cols=25  Identities=40%  Similarity=0.720  Sum_probs=14.4

Q ss_pred             CceeCCc--cccccCCHHHHHHHHHHc
Q psy11591        140 SLYICEI--CGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       140 ~~~~C~~--C~~~f~~~~~l~~H~~~h  164 (220)
                      .||.|+.  |++.|+..+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3555554  666666666666665554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=4.1e-05  Score=33.42  Aligned_cols=29  Identities=21%  Similarity=0.418  Sum_probs=17.3

Q ss_pred             CCcccccchhhcCChhHHHHHHhhhcCCC
Q psy11591         28 RPHVCHVCSKSFRNRGKLNVHYKRVHERI   56 (220)
Q Consensus        28 ~~~~C~~C~~~~~~~~~l~~H~~~~h~~~   56 (220)
                      +||.|..|.....+.++|..|....|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            35666666666666666666665555443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=4.9e-05  Score=33.00  Aligned_cols=21  Identities=33%  Similarity=0.681  Sum_probs=9.6

Q ss_pred             eeCCccccccCCHHHHHHHHH
Q psy11591        142 YICEICGKDFGTARYLKRHKD  162 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~  162 (220)
                      |.|..|+.+|.+..+|..|++
T Consensus         2 y~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhhh
Confidence            444444444444444444443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.48  E-value=5.8e-05  Score=31.88  Aligned_cols=25  Identities=36%  Similarity=0.640  Sum_probs=16.4

Q ss_pred             eCCccccccCCHHHHHHHHHHcCCC
Q psy11591        143 ICEICGKDFGTARYLKRHKDTHNSV  167 (220)
Q Consensus       143 ~C~~C~~~f~~~~~l~~H~~~h~~~  167 (220)
                      .|+.|.+.|.+...|..|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4666666666666666666666665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.47  E-value=6.4e-05  Score=35.86  Aligned_cols=23  Identities=26%  Similarity=0.735  Sum_probs=9.9

Q ss_pred             ccccccccccCchhHHHHHhhhc
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      |.|.+|++.|.+..+|-=|++.|
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTT
T ss_pred             cCCCCCCCccCCcccccchHhhh
Confidence            44444444444444444444444

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=3.7e-05  Score=33.40  Aligned_cols=25  Identities=44%  Similarity=0.818  Sum_probs=22.8

Q ss_pred             cccccccccccCchhHHHHHhhhcc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      ||.|..|..+|.+.+.|..||++-.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            7999999999999999999998744

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.46  E-value=4.2e-05  Score=36.49  Aligned_cols=30  Identities=27%  Similarity=0.599  Sum_probs=26.9

Q ss_pred             CCceeCCccccccCCHHHHHHHHHHcCCCC
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDTHNSVN  168 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  168 (220)
                      .+.|.|.+|++.|.+...|=.|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999997654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.44  E-value=2.9e-05  Score=33.68  Aligned_cols=26  Identities=38%  Similarity=0.787  Sum_probs=21.0

Q ss_pred             CCCccchhhhcCHHHHHHHHHHhhCC
Q psy11591          2 FKCPQCGALLKNIWSLREHIMIHTGE   27 (220)
Q Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~~~~~   27 (220)
                      |.|..|...|..+..|+.||.+|+++
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccCC
Confidence            67888888888888888888888764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=5.7e-05  Score=32.95  Aligned_cols=24  Identities=25%  Similarity=0.520  Sum_probs=13.3

Q ss_pred             cccccccccccCchhHHHHHhhhc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSH  192 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h  192 (220)
                      ||+|..|.+...+.+.|..|+++-
T Consensus         2 py~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhcc
Confidence            555555555555555555555443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=3.1e-05  Score=34.55  Aligned_cols=25  Identities=28%  Similarity=0.727  Sum_probs=13.2

Q ss_pred             cccccc--cccccCchhHHHHHh-hhcc
Q psy11591        169 TFVCEV--CNTGFKVKKHLTQHY-KSHS  193 (220)
Q Consensus       169 ~~~C~~--C~~~f~~~~~l~~H~-~~h~  193 (220)
                      ||.|.+  |.+.|++.++-..|+ ++|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            555544  555555555555554 4443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.29  E-value=0.00012  Score=30.39  Aligned_cols=22  Identities=41%  Similarity=0.889  Sum_probs=10.4

Q ss_pred             ecCcCccccCChhhHHHHHhhh
Q psy11591        115 KCNYCEKVYNNPSNLQRHIKTH  136 (220)
Q Consensus       115 ~C~~C~~~f~~~~~l~~H~~~h  136 (220)
                      .|..|.++|..++.|.+|++.|
T Consensus         2 kcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGGT
T ss_pred             cccchHHHHHHHHHHHHHHHhh
Confidence            3444444444444444444443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.00011  Score=31.80  Aligned_cols=26  Identities=35%  Similarity=0.705  Sum_probs=14.9

Q ss_pred             cccccccccccCchhHHHHHhhhccc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      -|-|+.|...|...-.|+.||-+|+|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            35555555555555555555555554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=4.6e-05  Score=34.00  Aligned_cols=27  Identities=37%  Similarity=0.749  Sum_probs=19.0

Q ss_pred             CceeCCc--cccccCCHHHHHHHH-HHcCC
Q psy11591        140 SLYICEI--CGKDFGTARYLKRHK-DTHNS  166 (220)
Q Consensus       140 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  166 (220)
                      +||.|.+  |.++|+..+.-..|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4677766  778887777777776 55543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=9.2e-05  Score=31.75  Aligned_cols=25  Identities=24%  Similarity=0.371  Sum_probs=20.4

Q ss_pred             cccccccccccCchhHHHHHhhhcc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      |-+|+.|.++.++...|+.|-++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5578888888888888888888874

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00018  Score=34.46  Aligned_cols=27  Identities=33%  Similarity=0.548  Sum_probs=23.2

Q ss_pred             cCCCceeCCccccccCCHHHHHHHHHH
Q psy11591        137 TDNSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       137 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      +|-+||.|..|++.|....++.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            366899999999999999999998753

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00014  Score=31.62  Aligned_cols=22  Identities=23%  Similarity=0.501  Sum_probs=9.9

Q ss_pred             ceeCCccccccCCHHHHHHHHH
Q psy11591        141 LYICEICGKDFGTARYLKRHKD  162 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~  162 (220)
                      ||+|.+|....++.++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            3444444444444444444443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.14  E-value=0.00013  Score=31.58  Aligned_cols=26  Identities=27%  Similarity=0.632  Sum_probs=23.0

Q ss_pred             Ccccccc--cccccCchhHHHHHhhhcc
Q psy11591        168 NTFVCEV--CNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       168 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  193 (220)
                      .||.|+.  |++.|+..+.|.+|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5899975  9999999999999998873

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00016  Score=31.43  Aligned_cols=28  Identities=25%  Similarity=0.421  Sum_probs=24.7

Q ss_pred             CcccccccccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +||+|+.|.....+.+.|..|++.-|+.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5899999999999999999999876654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.05  E-value=0.00015  Score=32.26  Aligned_cols=27  Identities=30%  Similarity=0.704  Sum_probs=18.5

Q ss_pred             CcccccchhhcCChhHHHHHHhhhcCC
Q psy11591         29 PHVCHVCSKSFRNRGKLNVHYKRVHER   55 (220)
Q Consensus        29 ~~~C~~C~~~~~~~~~l~~H~~~~h~~   55 (220)
                      ||.|..|++.|....-|..|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            566777777777777777776666654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.00  E-value=0.00017  Score=31.29  Aligned_cols=26  Identities=38%  Similarity=0.786  Sum_probs=15.1

Q ss_pred             cccccc--cccccCchhHHHHHhhhccc
Q psy11591        169 TFVCEV--CNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       169 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  194 (220)
                      ||.|..  |.++|.+.-.|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455543  66666666666666655554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.99  E-value=0.00021  Score=31.82  Aligned_cols=23  Identities=26%  Similarity=0.699  Sum_probs=16.9

Q ss_pred             cccccccccccCchhHHHHHhhh
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      ||.|.+|+..|+...-|.+|++.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            57777777777777777777543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.86  E-value=0.00031  Score=29.08  Aligned_cols=22  Identities=32%  Similarity=0.680  Sum_probs=13.2

Q ss_pred             CcccccchhhcCChhHHHHHHh
Q psy11591         29 PHVCHVCSKSFRNRGKLNVHYK   50 (220)
Q Consensus        29 ~~~C~~C~~~~~~~~~l~~H~~   50 (220)
                      ||+|..|+..|.....|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4566666666666666666653

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.80  E-value=0.00032  Score=30.42  Aligned_cols=26  Identities=35%  Similarity=0.630  Sum_probs=13.4

Q ss_pred             ceeCCc--cccccCCHHHHHHHHHHcCC
Q psy11591        141 LYICEI--CGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       141 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  166 (220)
                      ||.|.+  |.+.|.+.-.|.+|.-+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            444443  55555555555555555544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.73  E-value=0.00039  Score=28.77  Aligned_cols=22  Identities=32%  Similarity=0.673  Sum_probs=19.1

Q ss_pred             cccccccccccCchhHHHHHhh
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYK  190 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~  190 (220)
                      ||.|+.|...|.++.+|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7889999999999999998874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.0012  Score=28.19  Aligned_cols=24  Identities=21%  Similarity=0.372  Sum_probs=14.4

Q ss_pred             ceeCCccccccCCHHHHHHHHHHc
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h  164 (220)
                      |.+|+.|.++.++...|+.|.++|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            345666666666666666666555

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00071  Score=30.77  Aligned_cols=26  Identities=23%  Similarity=0.598  Sum_probs=20.5

Q ss_pred             cccccccccccCchhHHHHHhhhccc
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKSHSM  194 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~h~~  194 (220)
                      .|.|+.|+++|.....+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47888888888888888888776554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.50  E-value=0.00089  Score=28.39  Aligned_cols=23  Identities=26%  Similarity=0.537  Sum_probs=19.1

Q ss_pred             cccccccccccCchhHHHHHhhh
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      ||+|..||+.+..+..|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68899999998888888888643

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.00071  Score=28.81  Aligned_cols=23  Identities=26%  Similarity=0.681  Sum_probs=18.3

Q ss_pred             CCCccchhhhcCHHHHHHHHHHh
Q psy11591          2 FKCPQCGALLKNIWSLREHIMIH   24 (220)
Q Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~~   24 (220)
                      |.||.|+-....+++|+.|++..
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            67888888888888888888753

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.30  E-value=0.0019  Score=27.35  Aligned_cols=23  Identities=26%  Similarity=0.499  Sum_probs=15.6

Q ss_pred             ceeCCccccccCCHHHHHHHHHH
Q psy11591        141 LYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      ||.|..||+.+-.+.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            46677777777777777776543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.0014  Score=30.85  Aligned_cols=27  Identities=30%  Similarity=0.641  Sum_probs=15.2

Q ss_pred             CCcccc--cccccccCchhHHHHHhhhcc
Q psy11591        167 VNTFVC--EVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       167 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      ++||.|  +-|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            456666  336666666666666655443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0026  Score=29.94  Aligned_cols=28  Identities=32%  Similarity=0.720  Sum_probs=20.4

Q ss_pred             CCCceeC--CccccccCCHHHHHHHHHHcC
Q psy11591        138 DNSLYIC--EICGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       138 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  165 (220)
                      .++||.|  +-|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            3677888  448888888888877777664

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0035  Score=28.40  Aligned_cols=26  Identities=31%  Similarity=0.745  Sum_probs=22.0

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcCC
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~~  166 (220)
                      .|.|..|++.|.....+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47899999999999999898887765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0024  Score=31.58  Aligned_cols=25  Identities=36%  Similarity=0.805  Sum_probs=17.7

Q ss_pred             ceeCCccccccCCHHHHHHHHHHcC
Q psy11591        141 LYICEICGKDFGTARYLKRHKDTHN  165 (220)
Q Consensus       141 ~~~C~~C~~~f~~~~~l~~H~~~h~  165 (220)
                      .|.|..|+|+|.....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            3667777777777777777776654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0038  Score=30.86  Aligned_cols=26  Identities=27%  Similarity=0.544  Sum_probs=22.8

Q ss_pred             CcccccccccccCchhHHHHHhhhcc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHS  193 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~  193 (220)
                      ..|.|..|++.|.+...|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999987764

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.33  E-value=0.0033  Score=28.20  Aligned_cols=21  Identities=29%  Similarity=0.589  Sum_probs=16.8

Q ss_pred             CCCccchhhhcCHHHHHHHHH
Q psy11591          2 FKCPQCGALLKNIWSLREHIM   22 (220)
Q Consensus         2 ~~C~~C~~~f~~~~~l~~H~~   22 (220)
                      |.|+.||..|++.+.|..|+.
T Consensus         9 f~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHTT
T ss_pred             eeccccceeecChhHHHhhhh
Confidence            678888888888888888865

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.21  E-value=0.0054  Score=26.92  Aligned_cols=28  Identities=18%  Similarity=0.546  Sum_probs=17.8

Q ss_pred             Ccccccc--cccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCEV--CNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      +.|.|+.  |+-.|+-...|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            3466643  666676667777776666654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0059  Score=28.03  Aligned_cols=19  Identities=26%  Similarity=0.308  Sum_probs=10.3

Q ss_pred             cccCchhHHHHHhhhcccc
Q psy11591        177 TGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       177 ~~f~~~~~l~~H~~~h~~~  195 (220)
                      +.|...-.|..|+++|+|+
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4455555555555555543

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.016  Score=24.48  Aligned_cols=21  Identities=19%  Similarity=0.365  Sum_probs=11.7

Q ss_pred             eeCCccccccCCHHHHHHHHH
Q psy11591        142 YICEICGKDFGTARYLKRHKD  162 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~  162 (220)
                      |.|+.|+.....++.|+.|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            455555555555555555554

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.94  E-value=0.015  Score=24.76  Aligned_cols=18  Identities=33%  Similarity=0.647  Sum_probs=8.3

Q ss_pred             cccccCCHHHHHHHHHHc
Q psy11591        147 CGKDFGTARYLKRHKDTH  164 (220)
Q Consensus       147 C~~~f~~~~~l~~H~~~h  164 (220)
                      |++.|...+.++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            444444444444444443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.86  E-value=0.0078  Score=24.84  Aligned_cols=22  Identities=32%  Similarity=0.659  Sum_probs=15.4

Q ss_pred             ccccccccccCchhHHHHHhhh
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      |.|+.|-+.|..+..+..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5677777777777777777654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.79  E-value=0.0097  Score=26.63  Aligned_cols=22  Identities=27%  Similarity=0.606  Sum_probs=16.7

Q ss_pred             cccccccccccCchhHHHHHhh
Q psy11591        169 TFVCEVCNTGFKVKKHLTQHYK  190 (220)
Q Consensus       169 ~~~C~~C~~~f~~~~~l~~H~~  190 (220)
                      .|.|.-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4778888888888888887753

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.45  E-value=0.025  Score=23.29  Aligned_cols=22  Identities=27%  Similarity=0.599  Sum_probs=12.7

Q ss_pred             eeCCccccccCCHHHHHHHHHH
Q psy11591        142 YICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      |.|++|-+.|....++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4566666666666666555543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.31  E-value=0.023  Score=25.73  Aligned_cols=25  Identities=24%  Similarity=0.547  Sum_probs=13.3

Q ss_pred             CCceeCCccccccCCHHHHHHHHHH
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      +..|.|.+|.+.+...+++-+|.-+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            3445555555555555555555443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.012  Score=27.02  Aligned_cols=18  Identities=22%  Similarity=0.327  Sum_probs=9.9

Q ss_pred             cccCCHHHHHHHHHHcCC
Q psy11591        149 KDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       149 ~~f~~~~~l~~H~~~h~~  166 (220)
                      +.|.....|..|+++|+|
T Consensus        15 ~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHC
T ss_pred             CcchhHHHHHHHHhhcCC
Confidence            345555555555555554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.20  E-value=0.026  Score=24.21  Aligned_cols=22  Identities=23%  Similarity=0.768  Sum_probs=10.4

Q ss_pred             ccccccccccCChhHHHHHHhh
Q psy11591         59 HQCNHCGRAFSDKSNLTVHIRT   80 (220)
Q Consensus        59 ~~C~~C~~~~~~~~~l~~h~~~   80 (220)
                      |.|..|++.+.+...+.-|++.
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            3444455544444444444443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.61  E-value=0.014  Score=30.97  Aligned_cols=28  Identities=25%  Similarity=0.561  Sum_probs=23.1

Q ss_pred             CcccccccccccCchhHHHHHhhhcccc
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKSHSMF  195 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  195 (220)
                      ..|+|..|+..|.+...|..|+..|..+
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            4588888988888888888888887655

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.32  E-value=0.011  Score=26.78  Aligned_cols=28  Identities=21%  Similarity=0.605  Sum_probs=24.1

Q ss_pred             cCCCCcccccccccccCchhHHHHHhhh
Q psy11591        164 HNSVNTFVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       164 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      ..|+..|.|.+|.+.+...+.+.+|.-+
T Consensus         3 kEg~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           3 KEGEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            3467789999999999999999999644

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.31  E-value=0.053  Score=26.55  Aligned_cols=25  Identities=28%  Similarity=0.485  Sum_probs=13.8

Q ss_pred             CCceeCCccccccCCHHHHHHHHHH
Q psy11591        139 NSLYICEICGKDFGTARYLKRHKDT  163 (220)
Q Consensus       139 ~~~~~C~~C~~~f~~~~~l~~H~~~  163 (220)
                      +.|-.|+.|+.....+.+|++|+..
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHH
Confidence            3455555555555555555555543

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.93  E-value=0.071  Score=22.81  Aligned_cols=20  Identities=30%  Similarity=0.693  Sum_probs=10.2

Q ss_pred             eeCCccccccCCHHHHHHHH
Q psy11591        142 YICEICGKDFGTARYLKRHK  161 (220)
Q Consensus       142 ~~C~~C~~~f~~~~~l~~H~  161 (220)
                      |.|..||+...+...+.-|.
T Consensus         3 ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEE
Confidence            44555555555555555443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.76  E-value=0.053  Score=23.67  Aligned_cols=20  Identities=25%  Similarity=0.589  Sum_probs=9.7

Q ss_pred             cccccCCHHHHHHHHHHcCC
Q psy11591        147 CGKDFGTARYLKRHKDTHNS  166 (220)
Q Consensus       147 C~~~f~~~~~l~~H~~~h~~  166 (220)
                      |+..|.....|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            44444444455555444444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.31  E-value=0.018  Score=31.42  Aligned_cols=24  Identities=25%  Similarity=0.505  Sum_probs=19.4

Q ss_pred             CcccccccccccCchhHHHHHhhh
Q psy11591        168 NTFVCEVCNTGFKVKKHLTQHYKS  191 (220)
Q Consensus       168 ~~~~C~~C~~~f~~~~~l~~H~~~  191 (220)
                      ..|.|..|++.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            348888898888888888888754

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.14  E-value=0.035  Score=26.31  Aligned_cols=8  Identities=25%  Similarity=0.895  Sum_probs=3.5

Q ss_pred             eecCcCcc
Q psy11591        114 FKCNYCEK  121 (220)
Q Consensus       114 ~~C~~C~~  121 (220)
                      |.|+.||.
T Consensus         6 ~~C~vCG~   13 (37)
T d1nnqa2           6 YICPICGY   13 (37)
T ss_dssp             EECTTTCC
T ss_pred             EECCCCCC
Confidence            44444443

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.69  E-value=0.054  Score=25.42  Aligned_cols=12  Identities=17%  Similarity=0.423  Sum_probs=6.2

Q ss_pred             CCCccccccccc
Q psy11591        166 SVNTFVCEVCNT  177 (220)
Q Consensus       166 ~~~~~~C~~C~~  177 (220)
                      |+.|-.|++|+.
T Consensus        17 g~~Pe~CPvCg~   28 (36)
T d1yuza2          17 GEDFEKCPICFR   28 (36)
T ss_dssp             SSCCSBCTTTCC
T ss_pred             CCCCCcCCCCCC
Confidence            344555555553

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.69  E-value=0.073  Score=26.04  Aligned_cols=33  Identities=18%  Similarity=0.433  Sum_probs=27.4

Q ss_pred             CCCCcccccccccccCchhHHHHHhhhcccccC
Q psy11591        165 NSVNTFVCEVCNTGFKVKKHLTQHYKSHSMFIP  197 (220)
Q Consensus       165 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  197 (220)
                      ..+.|..|++|+-...+...|++|+..-|=.+|
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            346789999999999999999999987665544

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.13  E-value=0.024  Score=30.00  Aligned_cols=25  Identities=28%  Similarity=0.693  Sum_probs=19.2

Q ss_pred             CCCccchhhhcCHHHHHHHHHHhhC
Q psy11591          2 FKCPQCGALLKNIWSLREHIMIHTG   26 (220)
Q Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~~~~   26 (220)
                      |.|.+|+..|-+...|..|+..|+.
T Consensus        19 yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          19 YQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             eeechhHHHHhhHHHHHHHHHhccH
Confidence            6788888888888888888777754

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.10  E-value=0.081  Score=22.07  Aligned_cols=16  Identities=44%  Similarity=0.688  Sum_probs=6.8

Q ss_pred             cccccCCHHHHHHHHH
Q psy11591        147 CGKDFGTARYLKRHKD  162 (220)
Q Consensus       147 C~~~f~~~~~l~~H~~  162 (220)
                      |+++|..-..|..|+-
T Consensus         9 c~kafkkhnqlkvhqf   24 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQF   24 (28)
T ss_dssp             CCCEESSHHHHHHHHH
T ss_pred             chHHHhhccceEEEee
Confidence            4444444444444433

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.79  E-value=0.058  Score=29.31  Aligned_cols=24  Identities=25%  Similarity=0.665  Sum_probs=17.6

Q ss_pred             CCCcccccchhhcCChhHHHHHHh
Q psy11591         27 ERPHVCHVCSKSFRNRGKLNVHYK   50 (220)
Q Consensus        27 ~~~~~C~~C~~~~~~~~~l~~H~~   50 (220)
                      ...|.|..|++.|.+...|..|++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            345778888888888888877763

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.42  E-value=0.096  Score=27.90  Aligned_cols=14  Identities=21%  Similarity=0.755  Sum_probs=6.4

Q ss_pred             ceeCCccccccCCH
Q psy11591        141 LYICEICGKDFGTA  154 (220)
Q Consensus       141 ~~~C~~C~~~f~~~  154 (220)
                      .|.|+.|++.|+..
T Consensus        14 ~y~Cp~C~~~ys~L   27 (62)
T d1vd4a_          14 SFKCPVCSSTFTDL   27 (62)
T ss_dssp             EEECSSSCCEEEHH
T ss_pred             ceECCCCCCCcchh
Confidence            34444444444433

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.73  E-value=0.19  Score=22.97  Aligned_cols=21  Identities=24%  Similarity=0.518  Sum_probs=17.3

Q ss_pred             ccccccccccCchhHHHHHhh
Q psy11591        170 FVCEVCNTGFKVKKHLTQHYK  190 (220)
Q Consensus       170 ~~C~~C~~~f~~~~~l~~H~~  190 (220)
                      -.|..|+-+|++...+..|++
T Consensus         9 rYC~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_           9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             hHHhhCCceehhHHHHHHHHH
Confidence            368889989999888888865

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.68  E-value=0.77  Score=19.39  Aligned_cols=16  Identities=44%  Similarity=1.014  Sum_probs=8.2

Q ss_pred             cccccCCHHHHHHHHH
Q psy11591        147 CGKDFGTARYLKRHKD  162 (220)
Q Consensus       147 C~~~f~~~~~l~~H~~  162 (220)
                      ||+.|++...|..|.+
T Consensus         8 c~kifsnrqylnhh~k   23 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TCCEESSHHHHHHHHH
T ss_pred             chhhhccHHHHHhHHH
Confidence            5555555555544443

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.86  E-value=0.7  Score=20.91  Aligned_cols=20  Identities=25%  Similarity=0.469  Sum_probs=9.6

Q ss_pred             eCCccccccCCHHHHHHHHH
Q psy11591        143 ICEICGKDFGTARYLKRHKD  162 (220)
Q Consensus       143 ~C~~C~~~f~~~~~l~~H~~  162 (220)
                      .|.+|-+.|+++.++.+|+.
T Consensus         5 tclecmrtfkssfsiwrhqv   24 (41)
T d1wjpa3           5 TCLECMRTFKSSFSIWRHQV   24 (41)
T ss_dssp             EEGGGTEECSSHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhhh
Confidence            34444455555544444443