Psyllid ID: psy11785

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
Protein Sequence
MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAGLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAISLD
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccEEHHHHHHHHHHcccEEEEEccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccHHHHHcccccccEEEEEEEcEEEEEEEccccccHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccccccccccccccccccccEEccccccccEEEccccccccccccccccccEEEEEccEEcc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHccHccccccccccccHccccccHHcccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccHccccccccccccccccccccEEEEccccccccccEEccccccEEEEEEccccc
Coil and Loop (DISEMBL)
MGQTAVYTlgipyiddnvanresplYFAITIGVRILGPSLGFILGSFCTrlyvdlsipsditpsdprwiGAWWLGLVLVAVFLMLAAVAMFMfpktltkaspvngtttvatlptkkesnqknpslkdFPKAVKRLLKNDILMYRTassvlhilpiaglytflpkyfetqfrlpshtanmvsGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTfigcpmdewagltnangissfepmcatthgcecdhskfnpicggdgrtyfsachagcqnissidgKVQTLLFIEAISLD
Flexible Loop (DISEMBL)
MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKtltkaspvngtttvatlptkkesnqknpslkdfpKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAGLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAISLD
Low Complexity Region (SEG)
MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGlvlvavflmlaavamfmfPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANmvsgvggilvmgigiilsgvFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAGLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAISLD
Disordered region (IsUnstruct)
****AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKA******************************AVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAGLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAI***
Disordered Region (DISOPRED)
MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPK*************************KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAGLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAISLD
Disordered Region (DISEMBL)
MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAGLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAISLD
Disordered Region (DISPRO)
*GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLT***********************NPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAGLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAISLD
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAGLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAISLD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	308	2.2.26 [Sep-21-2011]
Q8HYW2	710	Solute carrier organic an	yes	N/A	0.931	0.404	0.354	1e-46
Q8R3L5	710	Solute carrier organic an	yes	N/A	0.931	0.404	0.348	1e-46
Q99N02	710	Solute carrier organic an	yes	N/A	0.931	0.404	0.348	3e-46
Q9UIG8	710	Solute carrier organic an	yes	N/A	0.931	0.404	0.344	2e-45
Q8BGD4	722	Solute carrier organic an	no	N/A	0.918	0.391	0.342	5e-41
O88397	670	Solute carrier organic an	no	N/A	0.931	0.428	0.349	7e-41
Q71MB6	724	Solute carrier organic an	no	N/A	0.918	0.390	0.342	1e-40
Q9EPT5	643	Solute carrier organic an	no	N/A	0.935	0.447	0.325	4e-40
Q91YY5	670	Solute carrier organic an	no	N/A	0.931	0.428	0.339	2e-39
Q5RFF0	724	Solute carrier organic an	yes	N/A	0.922	0.392	0.341	3e-39

>sp|Q8HYW2|SO3A1_BOVIN Solute carrier organic anion transporter family member 3A1 OS=Bos taurus GN=SLCO3A1 PE=2 SV=1

 Score =  187 bits (474), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 154/316 (48%), Gaps = 29/316 (9%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPS- 59
           +G T V  LG+ YIDD+V  ++S LY  I   + + GP+ GFILGSFCT++YVD      
Sbjct: 189 IGATPVQPLGVSYIDDHVRRKDSSLYIGILFTMLVFGPACGFILGSFCTKIYVDAVFIDT 248

Query: 60  ---DITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKK 116
              DITP DPRWIGAWW G +L    L  ++V MF FP++L   S     +  A LP ++
Sbjct: 249 SNLDITPDDPRWIGAWWGGFLLCGALLFFSSVLMFGFPQSLPPHSDPALESEQAMLP-ER 307

Query: 117 ESNQKNPS-------------------LKDFPKAVKRLLKNDILMYRTASSVLHILPIAG 157
           E  +  PS                   L+  PK  K LL N +      ++ + I  +AG
Sbjct: 308 EYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIAVVAG 367

Query: 158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT 217
              FL KY E QF L + +AN + G+  I    +GI L G+ + K   +A        + 
Sbjct: 368 FAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALGAIRMAMLV 427

Query: 218 AVLYALGMGILTFIGCPMDEWAGLTNANGISS-----FEPMCATTHGCECDHSKFNPICG 272
            ++         F+GC     AG+T   G SS      +P  +    CEC    F P+CG
Sbjct: 428 NLVSTACYVSFLFLGCDTGPVAGVTVPYGNSSTPGSALDPYSSCNKNCECQTDSFTPVCG 487

Query: 273 GDGRTYFSACHAGCQN 288
            DG TY SAC AGC +
Sbjct: 488 ADGITYLSACFAGCNS 503

Mediates the Na(+)-independent transport of organic anions (By similarity). Mediates transport of prostaglandins (PG) E1 and E2, thyroxine (T4), deltorphin II, BQ-123 and vasopressin.
Bos taurus (taxid: 9913)

>sp|Q8R3L5|SO3A1_MOUSE Solute carrier organic anion transporter family member 3A1 OS=Mus musculus GN=Slco3a1 PE=2 SV=1

 Score =  186 bits (473), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 155/316 (49%), Gaps = 29/316 (9%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPS- 59
           +G T V  LG+ YIDD+V  ++S LY  I   + + GP+ GFILGSFCT++YVD      
Sbjct: 189 IGATPVQPLGVSYIDDHVRRKDSSLYIGILFTMLVFGPACGFILGSFCTKIYVDAVFIDT 248

Query: 60  ---DITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKK 116
              DITP DPRWIGAWW G +L    L  +++ MF FP++L   S     +  A LP ++
Sbjct: 249 SNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSDPGMESEQAMLP-ER 307

Query: 117 ESNQKNPS-------------------LKDFPKAVKRLLKNDILMYRTASSVLHILPIAG 157
           E  +  PS                   L+  PK  K LL N +      ++ + I  +AG
Sbjct: 308 EYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIVLAACMEIAVVAG 367

Query: 158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT 217
              FL KY E QF L + +AN + G+  I    +GI L G+ + K   +A        + 
Sbjct: 368 FAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALGAIRMAMLV 427

Query: 218 AVLYALGMGILTFIGCPMDEWAGLT-----NANGISSFEPMCATTHGCECDHSKFNPICG 272
            ++         F+GC     AG+T     N+   S+ +P     + CEC    F P+CG
Sbjct: 428 NLVSTACYVSFLFLGCDTGPVAGVTVRYGNNSARGSALDPYSPCNNNCECQTDSFTPVCG 487

Query: 273 GDGRTYFSACHAGCQN 288
            DG TY SAC AGC +
Sbjct: 488 ADGITYLSACFAGCNS 503

Mediates the Na(+)-independent transport of organic anions (By similarity). Mediates transport of prostaglandins (PG) E1 and E2, thyroxine (T4), deltorphin II, BQ-123 and vasopressin.

Mus musculus (taxid: 10090)

>sp|Q99N02|SO3A1_RAT Solute carrier organic anion transporter family member 3A1 OS=Rattus norvegicus GN=Slco3a1 PE=2 SV=1

 Score =  185 bits (470), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 154/316 (48%), Gaps = 29/316 (9%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPS- 59
           +G T V  LG+ YIDD+V  ++S LY  I   + + GP+ GFILGSFCT++YVD      
Sbjct: 189 IGATPVQPLGVSYIDDHVRRKDSSLYIGILFTMLVFGPACGFILGSFCTKIYVDAVFIDT 248

Query: 60  ---DITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKK 116
              DITP DPRWIGAWW G +L    L  +++ MF FP++L   S     +  A LP ++
Sbjct: 249 SNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSEPGMESEQAMLP-ER 307

Query: 117 ESNQKNPS-------------------LKDFPKAVKRLLKNDILMYRTASSVLHILPIAG 157
           E  +  PS                   L+  PK  K LL N +      ++ + I  +AG
Sbjct: 308 EYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIVLAACMEIAVVAG 367

Query: 158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT 217
              FL KY E QF L + +AN + G+  I    +GI L G+ + K   +A        + 
Sbjct: 368 FAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALGAIRMAMLV 427

Query: 218 AVLYALGMGILTFIGCPMDEWAGLT-----NANGISSFEPMCATTHGCECDHSKFNPICG 272
            ++         F+GC     AG+T     N+   S  +P     + CEC    F P+CG
Sbjct: 428 NLVSTACYVSFLFLGCDTVPVAGVTVRYGNNSARGSPLDPYSPCNNNCECQTDSFTPVCG 487

Query: 273 GDGRTYFSACHAGCQN 288
            DG TY SAC AGC +
Sbjct: 488 ADGITYLSACFAGCNS 503

Mediates the Na(+)-independent transport of organic anions (By similarity). Mediates transport of prostaglandins (PG) E1 and E2, thyroxine (T4), deltorphin II, BQ-123 and vasopressin.

Rattus norvegicus (taxid: 10116)

>sp|Q9UIG8|SO3A1_HUMAN Solute carrier organic anion transporter family member 3A1 OS=Homo sapiens GN=SLCO3A1 PE=1 SV=3

 Score =  182 bits (463), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 154/316 (48%), Gaps = 29/316 (9%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPS- 59
           +G T V  LG+ YIDD+V  ++S LY  I   + + GP+ GFILGSFCT++YVD      
Sbjct: 189 IGATPVQPLGVSYIDDHVRRKDSSLYIGILFTMLVFGPACGFILGSFCTKIYVDAVFIDT 248

Query: 60  ---DITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKK 116
              DITP DPRWIGAWW G +L    L  +++ MF FP++L   S     +  A L +++
Sbjct: 249 SNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSEPAMESEQAML-SER 307

Query: 117 ESNQKNPS-------------------LKDFPKAVKRLLKNDILMYRTASSVLHILPIAG 157
           E  +  PS                   L+  PK  K LL N +      ++ + I  +AG
Sbjct: 308 EYERPKPSNGVLRHPLEPDSSASCFQQLRVIPKVTKHLLSNPVFTCIILAACMEIAVVAG 367

Query: 158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT 217
              FL KY E QF L + +AN + G+  I    +GI L G+ + K   +A        + 
Sbjct: 368 FAAFLGKYLEQQFNLTTSSANQLLGMTAIPCACLGIFLGGLLVKKLSLSALGAIRMAMLV 427

Query: 218 AVLYALGMGILTFIGCPMDEWAGLTNANGISS-----FEPMCATTHGCECDHSKFNPICG 272
            ++         F+GC     AG+T   G S+      +P     + CEC    F P+CG
Sbjct: 428 NLVSTACYVSFLFLGCDTGPVAGVTVPYGNSTAPGSALDPYSPCNNNCECQTDSFTPVCG 487

Query: 273 GDGRTYFSACHAGCQN 288
            DG TY SAC AGC +
Sbjct: 488 ADGITYLSACFAGCNS 503

Mediates the Na(+)-independent transport of organic anions such as estrone-3-sulfate (PubMed:10873595). Mediates transport of prostaglandins (PG) E1 and E2, thyroxine (T4), deltorphin II, BQ-123 and vasopressin, but not DPDPE (a derivative of enkephalin lacking an N-terminal tyrosine residue), estrone-3-sulfate, taurocholate, digoxin nor DHEAS (PubMed:16971491).

Homo sapiens (taxid: 9606)

>sp|Q8BGD4|SO4C1_MOUSE Solute carrier organic anion transporter family member 4C1 OS=Mus musculus GN=Slco4c1 PE=2 SV=1

 Score =  168 bits (425), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 148/292 (50%), Gaps = 9/292 (3%)

Query: 6   VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSI--PSDITP 63
           +YTLG  +IDD+V   +S LY  I   + ILGP++G++LG     +Y+D+++   SD+T 
Sbjct: 241 LYTLGTAFIDDSVPTHKSSLYIGIGYSMSILGPAIGYVLGGQLLTMYIDIAMGQSSDLTE 300

Query: 64  SDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKN- 122
            DPRW+GAWW+G +L  +F     +    FPK L   + +    T  T      S Q   
Sbjct: 301 DDPRWLGAWWIGFLLAWLFAWSLIMPFSCFPKHLPGTAKIQAGKTSQTHQNNSTSFQHTD 360

Query: 123 ----PSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTAN 178
                S+KDFP AVK L++N + +    S+    L   G  TFLPK+ E QF L S  A 
Sbjct: 361 ENFGKSIKDFPTAVKNLMRNTVFICLVLSTTSEALITTGFATFLPKFIENQFGLTSSFAA 420

Query: 179 MVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEW 238
            + G   I    +G IL GV + KFK   +    +   T+ +  +   +  +  C  + +
Sbjct: 421 TLGGAVLIPGAALGQILGGVLVSKFKMKCKNTMKFALCTSGVALVLSFVFIYAKCENEPF 480

Query: 239 AGLTNA-NGISSFEPMCATTHG-CECDHSKFNPICGGDGRTYFSACHAGCQN 288
           AG++ + NG      + A  +  C C  S + P+CG DG  YFS C AGC N
Sbjct: 481 AGVSESYNGTGEMGNLTAPCNANCNCLRSYYYPLCGSDGIQYFSPCFAGCLN 532

Organic anion transporter, capable of transporting pharmacological substances such as digoxin, ouabain, thyroxine, methotrexate and cAMP. May participate in the regulation of membrane transport of ouabain. Involved in the uptake of the dipeptidyl peptidase-4 inhibitor sitagliptin and hence may play a role in its transport into and out of renal proximal tubule cells. May be involved in the first step of the transport pathway of digoxin and various compounds into the urine in the kidney. May be involved in sperm maturation by enabling directed movement of organic anions and compounds within or between cells. This ion-transporting process is important to maintain the strict epididymal homeostasis necessary for sperm maturation. May have a role in secretory functions since seminal vesicle epithelial cells are assumed to secrete proteins involved in decapacitation by modifying surface proteins to facilitate the acquisition of the ability to fertilize the egg.

Mus musculus (taxid: 10090)

>sp|O88397|SO1A5_RAT Solute carrier organic anion transporter family member 1A5 OS=Rattus norvegicus GN=Slco1a5 PE=2 SV=2

 Score =  167 bits (424), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 162/303 (53%), Gaps = 16/303 (5%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDL-SIPS 59
           +G+T +  LGI YI+D   +  SPLY  I    ++ GP +G +LGSFC  +YVD  S+ +
Sbjct: 170 IGETPIMPLGISYIEDFAKSENSPLYIGILETGKVFGPIVGLLLGSFCASIYVDTGSVNT 229

Query: 60  D---ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKA---SPVNGTTTVATLP 113
           D   ITP+D RW+GAWW+G ++ A   +L+++  F FPKTL K      V+GT       
Sbjct: 230 DDLTITPTDTRWVGAWWIGFLICAGVNILSSIPFFFFPKTLPKEGLQDDVDGTNNDKEEK 289

Query: 114 TKKESNQKNPSL-KDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRL 172
            ++++ ++N  + KDF   +K L  N I M    +SVL I     ++TFLPKY E Q+  
Sbjct: 290 HREKAKEENRGITKDFLPFMKSLSCNPIYMLLILTSVLQINAFINMFTFLPKYLEQQYGK 349

Query: 173 PSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTF-I 231
            +    ++ GV  +  + IG +L G  + KFK   +  AA++A    L+   +  L F I
Sbjct: 350 STAEVVLLIGVYNLPPICIGYLLIGFIMKKFKITVK-KAAYMAFCLSLFEYLLYFLHFMI 408

Query: 232 GCPMDEWAGLTNA-NGIS-----SFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAG 285
            C     AGLT +  G+        + +     GC C  + ++P+CG +G  Y SAC AG
Sbjct: 409 TCDNFPVAGLTASYEGVHHPLYVENKVLADCNRGCSCSTNSWDPVCGDNGLAYMSACLAG 468

Query: 286 CQN 288
           C+ 
Sbjct: 469 CKK 471

Mediates the Na(+)-independent transport of organic anions such as taurocholate and thyroid hormones.

Rattus norvegicus (taxid: 10116)

>sp|Q71MB6|SO4C1_RAT Solute carrier organic anion transporter family member 4C1 OS=Rattus norvegicus GN=Slco4c1 PE=1 SV=1

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 147/292 (50%), Gaps = 9/292 (3%)

Query: 6   VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSI--PSDITP 63
           +YTLG  +IDD+V   +S LY  I   + ILGP++G++LG     +Y+D+++   SD+T 
Sbjct: 241 LYTLGTAFIDDSVPTHKSSLYIGIGYSMSILGPAIGYVLGGQLLTMYIDVAMGQSSDLTE 300

Query: 64  SDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQK-- 121
            DPRW+GAWW+G +L  +F     +    FPK L   + +    T  T      S Q   
Sbjct: 301 DDPRWLGAWWIGFLLAWLFAWSLIMPFSCFPKHLPGTAKIQAGKTSQTHQNNSTSFQHMD 360

Query: 122 ---NPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTAN 178
                S+KDFP AVK L++N + +    S+    L   G  TFLPK+ E QF L S  A 
Sbjct: 361 ENFGKSIKDFPTAVKNLMRNTVFICLVLSTTSEALVTTGFATFLPKFIENQFGLTSSFAA 420

Query: 179 MVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEW 238
            + G   I    +G IL GV + KFK   +    +   T+ +  +   +  +  C    +
Sbjct: 421 TLGGAVLIPGAALGQILGGVLVSKFKMKCKNTMKFALCTSGVALMLSFVFIYAKCENGPF 480

Query: 239 AGLTNA-NGISSFEPMCATTHG-CECDHSKFNPICGGDGRTYFSACHAGCQN 288
           AG++ + NG      + A  +  C C  S + P+CG DG  YFS C AGC N
Sbjct: 481 AGVSESYNGTGEMGNLTAPCNANCNCLRSYYYPLCGSDGVQYFSPCFAGCLN 532

Organic anion transporter, capable of transporting pharmacological substances such as digoxin, ouabain, thyroxine, methotrexate and cAMP. May participate in the regulation of membrane transport of ouabain. Involved in the uptake of the dipeptidyl peptidase-4 inhibitor sitagliptin and hence may play a role in its transport into and out of renal proximal tubule cells. May be involved in the first step of the transport pathway of digoxin and various compounds into the urine in the kidney. May be involved in sperm maturation by enabling directed movement of organic anions and compounds within or between cells. This ion-transporting process is important to maintain the strict epididymal homeostasis necessary for sperm maturation. May have a role in secretory functions since seminal vesicle epithelial cells are assumed to secrete proteins involved in decapacitation by modifying surface proteins to facilitate the acquisition of the ability to fertilize the egg.

Rattus norvegicus (taxid: 10116)

>sp|Q9EPT5|SO2A1_MOUSE Solute carrier organic anion transporter family member 2A1 OS=Mus musculus GN=Slco2a1 PE=1 SV=2

 Score =  165 bits (417), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 156/310 (50%), Gaps = 22/310 (7%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDL----S 56
           +G   +   GI Y+DD      SPLY +I   + + GP+ G++LGS   R++VD     +
Sbjct: 182 VGTVPIQPFGISYVDDFAEPTNSPLYISILFAIAVFGPAFGYLLGSVMLRIFVDYGRVDT 241

Query: 57  IPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKK 116
              +++P DPRWIGAWWLGL++ + FL++ ++  F FP+ +++ +     + +A    K 
Sbjct: 242 ATVNLSPGDPRWIGAWWLGLLISSGFLIVTSLPFFFFPRAMSRGAE---RSVIAEETMKM 298

Query: 117 ESNQKNPSLKD----FPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRL 172
           E ++   SL D    FP+   RLL N + M    S       IAGL TFL K+ E Q+  
Sbjct: 299 EEDKSRGSLMDFIKRFPRIFLRLLMNPLFMLVVLSQCTFSSVIAGLSTFLNKFLEKQYDA 358

Query: 173 PSHTANMVSGVGGILVMGIGIILSGV----FILKFKPNARFVAAWIAITAVLYALGMGIL 228
            +  AN++ G   +    +G++  G+    F+   +   R  A  + I+ +L A     L
Sbjct: 359 SAAYANLLIGAVNLPAAALGMLFGGILMKRFVFPLQTIPRVAATIMTISIILCA----PL 414

Query: 229 TFIGCPMDEWAGLTNANGISSFEPM-CATTHGCECDHSKFNPICGGDGRTYFSACHAGCQ 287
            F+GC     A +   +  SS  P   A    C C  S F+P+CG +G  Y S CHAGC 
Sbjct: 415 FFMGCSTPAVAEVYPPSTPSSIHPQPPACRRDCLCPDSVFHPVCGDNGVEYLSPCHAGCS 474

Query: 288 --NISSIDGK 295
             N+SS   K
Sbjct: 475 SLNVSSAASK 484

May mediate the release of newly synthesized prostaglandins from cells, the transepithelial transport of prostaglandins, and the clearance of prostaglandins from the circulation. Transports PGD2, as well as PGE1, PGE2 and PGF2A.

Mus musculus (taxid: 10090)

>sp|Q91YY5|SO1A5_MOUSE Solute carrier organic anion transporter family member 1A5 OS=Mus musculus GN=Slco1a5 PE=2 SV=1

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 161/303 (53%), Gaps = 16/303 (5%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDL-SIPS 59
           +G+T +  LGI YI+D   +  SPLY  I    +++GP +G +LGSFC R+YVD  S+ +
Sbjct: 170 IGETPIMPLGISYIEDFAKSENSPLYIGILESGKMIGPIVGLLLGSFCARIYVDTGSVNT 229

Query: 60  D---ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKA---SPVNGTTTVATLP 113
           D   ITP+D RW+GAWW+G ++ A   +L ++  F FPKTL K      V  T       
Sbjct: 230 DDLTITPTDTRWVGAWWIGFLVCAGVNILTSIPFFFFPKTLPKEGLQDNVARTENDKEEK 289

Query: 114 TKKESNQKNPSL-KDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRL 172
            ++++ ++N  + KDF   +K L  N I M    +SVL I     ++TFLPKY E Q+  
Sbjct: 290 HREKAKEENRGITKDFLPFMKSLSCNPIYMLLILTSVLQINAFINMFTFLPKYLEQQYGK 349

Query: 173 PSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTF-I 231
            +    ++ GV  +  + IG +L G  + KF+   +  AA++A    L+   +    F I
Sbjct: 350 STSEVVLLIGVCNLPPICIGYLLIGFIMKKFRITVK-KAAYMAFCLSLFEYLLSYFHFMI 408

Query: 232 GCPMDEWAGLTNA-NGIS-----SFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAG 285
            C   + AGLT +  G+        + +      C C  + ++P+CG +G +Y SAC AG
Sbjct: 409 SCDNFQVAGLTTSYEGVQHPLYVENKVLADCNTRCSCLTNTWDPVCGDNGLSYMSACLAG 468

Query: 286 CQN 288
           C+ 
Sbjct: 469 CEK 471

Mediates the Na(+)-independent transport of organic anions such as taurocholate and thyroid hormones.

Mus musculus (taxid: 10090)

>sp|Q5RFF0|SO4C1_PONAB Solute carrier organic anion transporter family member 4C1 OS=Pongo abelii GN=SLCO4C1 PE=2 SV=1

 Score =  162 bits (410), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 147/290 (50%), Gaps = 6/290 (2%)

Query: 4   TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSI--PSDI 61
           T +YTLG  ++DD+V   +S LY      + ILGP++G++LG     +YVD+++   +DI
Sbjct: 244 TPLYTLGTAFLDDSVPTHKSSLYIGTGYAMSILGPAIGYVLGGQLLTIYVDVAMGESTDI 303

Query: 62  TPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVN-GTTTVATLPTKKESNQ 120
           T  DPRW+GAWW+G +L  +F     +    FPK L   + +  G T+ A         +
Sbjct: 304 TEDDPRWLGAWWIGFLLSWIFAWSLIIPFSCFPKHLPGTAEIQAGKTSQAHQSNSNADAK 363

Query: 121 KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV 180
              S+KDFP A+K L+KN + M    S+    L   G  TFLPK+ E QF L S  A  +
Sbjct: 364 FGKSIKDFPAALKNLMKNAVFMCLVLSTSSEALITTGFATFLPKFIENQFGLTSSFAATL 423

Query: 181 SGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAG 240
            G   I    +G IL G  + KFK   +    +   T+ +      +  +  C  + +AG
Sbjct: 424 GGAVLIPGAALGQILGGFLVSKFKMTCKNTMKFALFTSGVALTLSFVFIYAKCGNEPFAG 483

Query: 241 LTNA-NGISSFEPMCATTHG-CECDHSKFNPICGGDGRTYFSACHAGCQN 288
           ++ + NG      + A  +  C C  S + P+C GDG  YFS C AGC N
Sbjct: 484 VSESYNGTGELGNLIAPCNANCNCLRSYYYPVC-GDGVQYFSPCFAGCSN 532

Organic anion transporter, capable of transporting pharmacological substances such as digoxin, ouabain, thyroxine, methotrexate and cAMP. May participate in the regulation of membrane transport of ouabain. Involved in the uptake of the dipeptidyl peptidase-4 inhibitor sitagliptin and hence may play a role in its transport into and out of renal proximal tubule cells. May be involved in the first step of the transport pathway of digoxin and various compounds into the urine in the kidney. May be involved in sperm maturation by enabling directed movement of organic anions and compounds within or between cells. This ion-transporting process is important to maintain the strict epididymal homeostasis necessary for sperm maturation. May have a role in secretory functions since seminal vesicle epithelial cells are assumed to secrete proteins involved in decapacitation by modifying surface proteins to facilitate the acquisition of the ability to fertilize the egg.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	308
380012470	739	PREDICTED: solute carrier organic anion	0.948	0.395	0.696	1e-121
340718289	741	PREDICTED: solute carrier organic anion	0.948	0.394	0.689	1e-121
328781181	741	PREDICTED: solute carrier organic anion	0.948	0.394	0.692	1e-121
350409868	741	PREDICTED: solute carrier organic anion	0.948	0.394	0.689	1e-121
307192330	739	Solute carrier organic anion transporter	0.948	0.395	0.696	1e-120
307187458	759	Solute carrier organic anion transporter	0.928	0.376	0.7	1e-120
383849071	745	PREDICTED: solute carrier organic anion	0.948	0.391	0.686	1e-119
242025588	864	conserved hypothetical protein [Pediculu	0.931	0.332	0.730	1e-117
332016585	741	Solute carrier organic anion transporter	0.928	0.385	0.680	1e-116
345483393	753	PREDICTED: solute carrier organic anion	0.944	0.386	0.651	1e-113

>gi|380012470|ref|XP_003690304.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Apis florea]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/306 (69%), Positives = 250/306 (81%), Gaps = 14/306 (4%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAVYTLGIPYIDDNVA+RESPLYFAITIGVRILGP+LGFILGS CT +Y DLS    
Sbjct: 275 MGQTAVYTLGIPYIDDNVASRESPLYFAITIGVRILGPALGFILGSLCTMIYADLSANPQ 334

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQ 120
           ITP+DPRW+GAWWLGLVL+A  LML ++ MF FP  L            A+    K ++ 
Sbjct: 335 ITPTDPRWVGAWWLGLVLIAAMLMLVSIGMFAFPTRLP-----------ASRTPPKRADA 383

Query: 121 KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV 180
           K PSL+DFPKAVKRLLKNDILM+RTASSVLHILPIAGLYTFLPKY E+QFRLP+H ANM+
Sbjct: 384 KKPSLRDFPKAVKRLLKNDILMFRTASSVLHILPIAGLYTFLPKYLESQFRLPAHHANMI 443

Query: 181 SGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAG 240
           SGVGGILVMG+GII+SGVFIL+ KPNARFVAAWIA TAV+YA+GMG+L FIGCPMD++AG
Sbjct: 444 SGVGGILVMGLGIIISGVFILRAKPNARFVAAWIAFTAVIYAIGMGVLMFIGCPMDDFAG 503

Query: 241 L-TNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTL 299
           L ++++G+SSFEP C  T  C+C  +KF+PICG DG+TYFSACHAGC N + +DGKV + 
Sbjct: 504 LVSHSDGLSSFEPTCEAT--CDCVRNKFSPICGADGKTYFSACHAGCSNYTIVDGKVASF 561

Query: 300 LFIEAI 305
              + I
Sbjct: 562 YNCQCI 567

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340718289|ref|XP_003397602.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Bombus terrestris]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/306 (68%), Positives = 250/306 (81%), Gaps = 14/306 (4%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAVYTLGIPYIDDNVA+RESPLYFAITIGVRILGP+LGFILGS CT +Y DLS    
Sbjct: 277 MGQTAVYTLGIPYIDDNVASRESPLYFAITIGVRILGPALGFILGSLCTMIYADLSANPQ 336

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQ 120
           ITP+DPRW+GAWWLGLVL++  LML ++ MF FP  L            A+    K ++ 
Sbjct: 337 ITPTDPRWVGAWWLGLVLISAMLMLVSIGMFAFPTRLP-----------ASRTPPKRADA 385

Query: 121 KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV 180
           K PSL+DFPKAVKRLLKNDILM+RTASSVLHILPIAGLYTFLPKY E+QFRLP+H ANM+
Sbjct: 386 KKPSLRDFPKAVKRLLKNDILMFRTASSVLHILPIAGLYTFLPKYLESQFRLPAHHANMI 445

Query: 181 SGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAG 240
           SGVGGILVMG+GII+SGVFIL+ KPNARFVAAWIA TA++YA+GMG+L FIGCPMD++AG
Sbjct: 446 SGVGGILVMGLGIIISGVFILRAKPNARFVAAWIAFTAIVYAIGMGVLMFIGCPMDDFAG 505

Query: 241 L-TNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTL 299
           L +++NG+SSFEP+C  T  C+C  +KF+PIC  DG+TYFSACHAGC N + +DGKV + 
Sbjct: 506 LVSHSNGLSSFEPVCEAT--CDCVRNKFSPICSADGKTYFSACHAGCSNYTVVDGKVASF 563

Query: 300 LFIEAI 305
              + I
Sbjct: 564 YNCQCI 569

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781181|ref|XP_003249934.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Apis mellifera]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/306 (69%), Positives = 248/306 (81%), Gaps = 14/306 (4%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAVYTLGIPYIDDNVA+RESPLYFAITIGVRILGP+LGFILGS CT +Y DLS    
Sbjct: 277 MGQTAVYTLGIPYIDDNVASRESPLYFAITIGVRILGPALGFILGSLCTMIYADLSANPQ 336

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQ 120
           ITP+DPRW+GAWWLGLVL+A  LML ++ MF FP  L            A+    K ++ 
Sbjct: 337 ITPTDPRWVGAWWLGLVLIAAMLMLVSIGMFAFPTRLP-----------ASRTPPKRADA 385

Query: 121 KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV 180
           K PSL+DFPKAVKRLLKNDILM+RTASSVLHILPIAGLYTFLPKY E+QFRLP+H ANM+
Sbjct: 386 KKPSLRDFPKAVKRLLKNDILMFRTASSVLHILPIAGLYTFLPKYLESQFRLPAHHANMI 445

Query: 181 SGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAG 240
           SGVGGILVMG+GII+SGVFIL+ KPNARFVAAWIA TAV+YA+GMG+L FIGCPMD++AG
Sbjct: 446 SGVGGILVMGLGIIISGVFILRAKPNARFVAAWIAFTAVIYAIGMGVLMFIGCPMDDFAG 505

Query: 241 L-TNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTL 299
           L ++++G+S FE  C  T  C CD +KF+PICG DG+TYFSACHAGC N + +DGKV + 
Sbjct: 506 LVSHSDGLSRFEQTCEAT--CYCDRNKFSPICGADGKTYFSACHAGCSNYTIVDGKVASF 563

Query: 300 LFIEAI 305
              + I
Sbjct: 564 YNCQCI 569

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409868|ref|XP_003488870.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Bombus impatiens]

 Score =  439 bits (1128), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/306 (68%), Positives = 250/306 (81%), Gaps = 14/306 (4%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAVYTLGIPYIDDNVA+RESPLYFAITIGVRILGP+LGFILGS CT +Y DLS    
Sbjct: 277 MGQTAVYTLGIPYIDDNVASRESPLYFAITIGVRILGPALGFILGSLCTMIYADLSANPQ 336

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQ 120
           ITP+DPRW+GAWWLGLVL++  LML ++ MF FP  L            A+    K ++ 
Sbjct: 337 ITPTDPRWVGAWWLGLVLISAMLMLVSIGMFAFPTRLP-----------ASRTPPKRADA 385

Query: 121 KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV 180
           K PSL+DFPKAVKRLLKNDILM+RTASSVLHILPIAGLYTFLPKY E+QFRLP+H ANM+
Sbjct: 386 KKPSLRDFPKAVKRLLKNDILMFRTASSVLHILPIAGLYTFLPKYLESQFRLPAHHANMI 445

Query: 181 SGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAG 240
           SGVGGILVMG+GII+SGVFIL+ KPNARFVAAWIA TA++YA+GMG+L FIGCPMD++AG
Sbjct: 446 SGVGGILVMGLGIIISGVFILRAKPNARFVAAWIAFTAIVYAIGMGVLMFIGCPMDDFAG 505

Query: 241 L-TNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTL 299
           L +++NG+SSFEP+C  T  C+C  +KF+PIC  DG+TYFSACHAGC N + +DGKV + 
Sbjct: 506 LVSHSNGLSSFEPVCEAT--CDCVRNKFSPICSADGKTYFSACHAGCSNYTVVDGKVASF 563

Query: 300 LFIEAI 305
              + I
Sbjct: 564 YNCQCI 569

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307192330|gb|EFN75596.1| Solute carrier organic anion transporter family member 3A1 [Harpegnathos saltator]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/306 (69%), Positives = 252/306 (82%), Gaps = 14/306 (4%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAVYTLGIPYIDDNVA+RESPLYFAITIGVRILGP+LGFILGS CT LY +LS+   
Sbjct: 275 MGQTAVYTLGIPYIDDNVASRESPLYFAITIGVRILGPALGFILGSMCTMLYANLSVNPP 334

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQ 120
           ITP DPRW+GAWWLGLVL++  LML ++ MF FP  L K+          T P  + ++ 
Sbjct: 335 ITPMDPRWVGAWWLGLVLISAMLMLVSIGMFAFPTRLPKSR---------TPP--RRADA 383

Query: 121 KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV 180
             PSL+DFP AVKRLLKNDILM+RTASSVLHILPIAGLYTFLPKY E+QFRLP+H ANM+
Sbjct: 384 PKPSLRDFPNAVKRLLKNDILMFRTASSVLHILPIAGLYTFLPKYLESQFRLPAHHANMI 443

Query: 181 SGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAG 240
           SGVGGILVMG+GII+SGVFIL+ KPNARFVAAWIA TAV+YA+GMG+L FIGCPMD++AG
Sbjct: 444 SGVGGILVMGLGIIISGVFILRAKPNARFVAAWIAFTAVVYAIGMGVLMFIGCPMDDFAG 503

Query: 241 L-TNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTL 299
           L ++++GIS+FEP+C  T  C+CD +KF+PICG DGRTYFSACHAGC N + +DGKV + 
Sbjct: 504 LVSHSDGISNFEPICEAT--CDCDRNKFSPICGADGRTYFSACHAGCSNYTVVDGKVASF 561

Query: 300 LFIEAI 305
              + I
Sbjct: 562 YNCQCI 567

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307187458|gb|EFN72542.1| Solute carrier organic anion transporter family member 3A1 [Camponotus floridanus]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/300 (70%), Positives = 250/300 (83%), Gaps = 14/300 (4%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAVYTLGIPYIDDNVA+RESPLYFAITIGVRILGP+LGFILGS CT +Y DL+    
Sbjct: 281 MGQTAVYTLGIPYIDDNVASRESPLYFAITIGVRILGPALGFILGSLCTMVYADLTRTPQ 340

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQ 120
           ITP+DPRW+GAWWLGLVL++  LM  ++ MF FP  L K+          T P  + ++ 
Sbjct: 341 ITPTDPRWVGAWWLGLVLISAMLMFVSIGMFAFPTRLPKSR---------TPP--RRADA 389

Query: 121 KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV 180
           K PSL+DFP AVKRLLKNDILM+RTASSVLHILPIAGLYTFLPKY E+QFRLP+H ANM+
Sbjct: 390 KKPSLRDFPSAVKRLLKNDILMFRTASSVLHILPIAGLYTFLPKYLESQFRLPAHHANMI 449

Query: 181 SGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAG 240
           SGVGGILVMG+GII+SGVFIL+ KPNARFVAAWIA TAV+YA+GMG+L FIGCPMD++AG
Sbjct: 450 SGVGGILVMGLGIIISGVFILRAKPNARFVAAWIAFTAVVYAIGMGVLMFIGCPMDDFAG 509

Query: 241 L-TNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTL 299
           L ++++G+SSFEP+C  +  C+CD +KF+PICG DGRTYFSACHAGC N +  DGKV ++
Sbjct: 510 LVSHSDGLSSFEPICEAS--CDCDRNKFSPICGADGRTYFSACHAGCSNYTVADGKVASV 567

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849071|ref|XP_003700170.1| PREDICTED: solute carrier organic anion transporter family member 3A1-like [Megachile rotundata]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/306 (68%), Positives = 250/306 (81%), Gaps = 14/306 (4%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAVYTLGIPYIDDNVA+RESPLYFAITIGVRILGP+LGFILGS CT +Y DLS+   
Sbjct: 281 MGQTAVYTLGIPYIDDNVASRESPLYFAITIGVRILGPALGFILGSVCTMIYADLSVNPQ 340

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQ 120
           ITP+D RW+GAWWLGLVL++  LML ++ MF FP  L            A+    K ++ 
Sbjct: 341 ITPTDLRWVGAWWLGLVLISAMLMLVSIGMFAFPTRLP-----------ASRTPPKRADA 389

Query: 121 KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV 180
           K PSL+DFPKAVKRLLKNDILM+RTASSVLHILPIAGLYTFLPKY E+QFRLP+H ANM+
Sbjct: 390 KKPSLRDFPKAVKRLLKNDILMFRTASSVLHILPIAGLYTFLPKYLESQFRLPAHHANMI 449

Query: 181 SGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAG 240
           SGVGGILVMG+GII+SGVFIL+ KPNARFVAAWIA TAV+YA+GMG+L FIGCPMD++AG
Sbjct: 450 SGVGGILVMGLGIIISGVFILRAKPNARFVAAWIAFTAVVYAIGMGVLMFIGCPMDDFAG 509

Query: 241 L-TNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTL 299
           L ++++G+SSFEP C  +  C+C  +KF+PICG DG+TYFSACHAGC N + +DGKV + 
Sbjct: 510 LVSHSDGLSSFEPTCDAS--CDCVRNKFSPICGADGKTYFSACHAGCSNYTIVDGKVASF 567

Query: 300 LFIEAI 305
              + I
Sbjct: 568 YNCQCI 573

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242025588|ref|XP_002433206.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212518747|gb|EEB20468.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  427 bits (1098), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 217/297 (73%), Positives = 242/297 (81%), Gaps = 10/297 (3%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAVYTLGIPYIDDNVA RESPLYFAITIGVRILGP++GFILGS CTRLY DLS+   
Sbjct: 419 MGQTAVYTLGIPYIDDNVATRESPLYFAITIGVRILGPAMGFILGSVCTRLYADLSVDPQ 478

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQ 120
           ITP+DPRW+GAWWLGLVLVA  L L+++AMF FPK L       G  T    P     N 
Sbjct: 479 ITPNDPRWVGAWWLGLVLVATLLALSSLAMFSFPKRLKS---FKGKIT----PRAFVRND 531

Query: 121 KNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV 180
           KNPSLKDFPKAVKRLLKNDILM+RTASSVLHILPIAGLYTFLPKY E+QFRL +H ANM+
Sbjct: 532 KNPSLKDFPKAVKRLLKNDILMFRTASSVLHILPIAGLYTFLPKYLESQFRLAAHAANMI 591

Query: 181 SGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWAG 240
           SGVGGILVMGIGII+SGVFIL++KPNARFVAAWIA TAV+YA+GMGIL  IGCPMD++AG
Sbjct: 592 SGVGGILVMGIGIIISGVFILRYKPNARFVAAWIAFTAVIYAIGMGILMLIGCPMDDFAG 651

Query: 241 LT-NANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKV 296
           L     G   F P+C TT  C CD  KF+PICG DG+TYFSACHAGC+N + +DG V
Sbjct: 652 LDFQGAGQPDFHPVCNTT--CNCDREKFSPICGIDGKTYFSACHAGCRNATLVDGMV 706

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016585|gb|EGI57466.1| Solute carrier organic anion transporter family member 3A1 [Acromyrmex echinatior]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/307 (68%), Positives = 246/307 (80%), Gaps = 21/307 (6%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAVYTLGIPYIDDNVA+RESPLYFAITIGVRILGP+LGFILGS CT +Y DLS    
Sbjct: 282 MGQTAVYTLGIPYIDDNVASRESPLYFAITIGVRILGPALGFILGSVCTMVYADLSRNPQ 341

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTL-TKASPVNGTTTVATLPTKKESN 119
           ITPSDPRW+GAWWLGLVL++  LM+ ++ MF FP  L T  SP             + S+
Sbjct: 342 ITPSDPRWVGAWWLGLVLISALLMIVSIGMFAFPPRLPTSRSP------------PRRSD 389

Query: 120 QKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANM 179
            + PSL+     VKRLLKNDILM+RTASSVLHILPIAGLYTFLPKY E+QFRLP+H ANM
Sbjct: 390 SQKPSLR-----VKRLLKNDILMFRTASSVLHILPIAGLYTFLPKYLESQFRLPAHHANM 444

Query: 180 VSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWA 239
           +SGVGGILVMG+GII+SGVFIL+ KPNARFVAAWIA TAV+YA+GMG+L FIGCPMD++A
Sbjct: 445 ISGVGGILVMGLGIIISGVFILRAKPNARFVAAWIAFTAVVYAIGMGVLMFIGCPMDDFA 504

Query: 240 GL-TNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQT 298
           GL ++++G+SSFEP C  T  C+CD +KF+PICG DG+TYFSACHAGC N +  DGKV +
Sbjct: 505 GLVSHSDGLSSFEPTCEAT--CDCDRNKFSPICGADGKTYFSACHAGCSNYTVADGKVAS 562

Query: 299 LLFIEAI 305
               + I
Sbjct: 563 FYNCQCI 569

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483393|ref|XP_003424809.1| PREDICTED: solute carrier organic anion transporter family member 4C1-like isoform 2 [Nasonia vitripennis] gi|345483395|ref|XP_001601987.2| PREDICTED: solute carrier organic anion transporter family member 4C1-like isoform 1 [Nasonia vitripennis]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/307 (65%), Positives = 239/307 (77%), Gaps = 16/307 (5%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           MGQTAV TLGIPYIDDNV +RESPLYF+ITIGV+ILGP++GF+LGS CTR+Y DLS+   
Sbjct: 291 MGQTAVNTLGIPYIDDNVTSRESPLYFSITIGVKILGPAMGFMLGSLCTRIYADLSVDPP 350

Query: 61  ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTL-TKASPVNGTTTVATLPTKKESN 119
           ITPSDPRW+GAWWLGLV ++  L++ ++ MF FP  L T  +P             K ++
Sbjct: 351 ITPSDPRWVGAWWLGLVFISTMLLIVSIGMFAFPMRLPTSRTP------------PKVAD 398

Query: 120 QKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANM 179
            K PSLKDFPKAVKRLLKNDIL++RTASSVLHILPIAGLYTFLPKY E+QFRL +H AN 
Sbjct: 399 AKKPSLKDFPKAVKRLLKNDILIFRTASSVLHILPIAGLYTFLPKYLESQFRLAAHDANF 458

Query: 180 VSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWA 239
           ++GVGGILVMG+GIILSG FILK   NARFVA WIA TA+ YA+GMGIL F+GCPM+++ 
Sbjct: 459 IAGVGGILVMGVGIILSGFFILKANLNARFVAGWIAFTAIAYAIGMGILMFVGCPMNDFT 518

Query: 240 GL-TNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQT 298
           GL TN  G+S FEP+C  T  C+CD +KF+PICG DGRTYFSACHAGC N +  +GKV  
Sbjct: 519 GLVTNEQGLSHFEPICEAT--CDCDKNKFSPICGADGRTYFSACHAGCSNYTVFEGKVAN 576

Query: 299 LLFIEAI 305
               + I
Sbjct: 577 FTDCQCI 583

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	308
FB|FBgn0036732	819	Oatp74D "Organic anion transpo	0.922	0.346	0.529	1.9e-74
FB|FBgn0034716	789	Oatp58Dc "Organic anion transp	0.587	0.229	0.302	1.4e-41
FB|FBgn0050277	684	Oatp58Da "Organic anion transp	0.902	0.406	0.324	1.7e-39
UNIPROTKB|F1N3T5	716	SLCO4C1 "Uncharacterized prote	0.957	0.412	0.316	1.3e-38
UNIPROTKB|F1RN62	718	SLCO4C1 "Uncharacterized prote	0.957	0.410	0.320	3.6e-38
UNIPROTKB|J9NWB2	591	SLCO4C1 "Uncharacterized prote	0.938	0.489	0.326	8.4e-38
MGI|MGI:1351867	710	Slco3a1 "solute carrier organi	0.399	0.173	0.406	9.7e-38
UNIPROTKB|F1Q4E0	617	SLCO4C1 "Uncharacterized prote	0.938	0.468	0.326	1.4e-37
UNIPROTKB|F1NSG0	709	SLCO3A1 "Uncharacterized prote	0.399	0.173	0.406	1.6e-37
UNIPROTKB|F1Q3M7	692	SLCO3A1 "Uncharacterized prote	0.399	0.177	0.406	2.3e-37

FB|FBgn0036732 Oatp74D "Organic anion transporting polypeptide 74D" [Drosophila melanogaster (taxid:7227)]

 Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
 Identities = 155/293 (52%), Positives = 183/293 (62%)

Query:     1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
             +GQTAV TLGIPYIDDNV +++SP+Y A+TIG+RILGP+ GFI GSFCTR YV+ S P  
Sbjct:   348 IGQTAVATLGIPYIDDNVGSKQSPMYMAVTIGMRILGPASGFIFGSFCTRWYVNFSNPG- 406

Query:    61 ITPSDPRWIGAWWLGXXXXXXXXXXXXXXXXXXPKTLT-KASPVNGTTTVATLPTKKESN 119
                +DPRWIGAWWLG                  PK L  K  P   T T A  P + E  
Sbjct:   407 FDATDPRWIGAWWLGPVAIGSLMLLASIAMFSFPKQLRGKQKPPGQTATPAA-PVEPE-- 463

Query:   120 QKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANX 179
              + P LKDFPK V+R L NDILM+RTAS V H+LPIAGLYTFLPKY ETQFRL ++ AN 
Sbjct:   464 -EKPKLKDFPKTVRRQLSNDILMFRTASCVFHLLPIAGLYTFLPKYLETQFRLATYDANM 522

Query:   180 XXXXXXXXXXXXXXXXXXXFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWA 239
                                FILK KP AR VAAWIA TA++Y+ GM IL FIGC M+++A
Sbjct:   523 IAAFCGILVMGIGIVISGLFILKRKPTARGVAAWIAFTALVYSAGMIILMFIGCSMNDFA 582

Query:   240 GLTNANGISS--FEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNIS 290
             G   ++G S    EP C+    C CD   F PIC  DG+ Y SACHAGC + S
Sbjct:   583 GYKPSDGNSPALIEPTCSAALNCTCDKENFAPICA-DGKMYISACHAGCSSSS 634

GO:0015347 "sodium-independent organic anion transmembrane transporter activity" evidence=ISS

GO:0015711 "organic anion transport" evidence=ISS

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

FB|FBgn0034716 Oatp58Dc "Organic anion transporting polypeptide 58Dc" [Drosophila melanogaster (taxid:7227)]

 Score = 274 (101.5 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
 Identities = 55/182 (30%), Positives = 89/182 (48%)

Query:   115 KKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPS 174
             +K + +   S +D  K  +RL+ N   M  T SS+ +++     + F PKY E Q+R  +
Sbjct:   399 QKTTAEAKASFQDMLKTFRRLITNKTYMCNTLSSIFYLVGYTPYWIFTPKYIEVQYRQSA 458

Query:   175 HTANXXXXXXXXXXXXXXXXXXXXFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCP 234
              T++                     I ++KP AR++AAW  I   L   G+    FIGCP
Sbjct:   459 ATSSMVTGTVALAFSAVGVLLSGFIISRYKPRARYMAAWNVIVGFLTVAGILAYAFIGCP 518

Query:   235 MDEWAGLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNIS-SID 293
              +E + + N +  S           C CD+ +++P+CG +  TY SACHAGC+ +  + +
Sbjct:   519 GNESSVIVNIHDSSLAGNTTTCNSACSCDYVRYSPVCGENNMTYISACHAGCKKLLVNSE 578

Query:   294 GK 295
             GK
Sbjct:   579 GK 580

GO:0015711 "organic anion transport" evidence=ISS

GO:0015347 "sodium-independent organic anion transmembrane transporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0031427 "response to methotrexate" evidence=IEP

FB|FBgn0050277 Oatp58Da "Organic anion transporting polypeptide 58Da" [Drosophila melanogaster (taxid:7227)]

 Score = 426 (155.0 bits), Expect = 1.7e-39, P = 1.7e-39
 Identities = 93/287 (32%), Positives = 137/287 (47%)

Query:     1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
             +GQ   YTLGI Y+DDN +  ++P   +++  +R+LGP++G+ L + C RLY++ ++   
Sbjct:   216 VGQALFYTLGIAYMDDNTSKAKTPAMLSMSTFLRMLGPAIGYSLAAVCLRLYIEPTLEPL 275

Query:    61 ITPSDPRWIGAWWLGXXXXXXXXXXXXXXXXXXPKTLTKASPVNGTTTVATLPTKKESNQ 120
             I   DPRW+GAWWLG                  PK L  A              +K+S  
Sbjct:   276 IGQEDPRWLGAWWLGWLVLAAITLVSAILLFMFPKQLPSARK---RRLQLKQDERKQSLP 332

Query:   121 KNP-SLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANX 179
              N  SL D  K VK+L KN + +Y T +S+L+       + F PKY ETQ+R  +  A  
Sbjct:   333 LNERSLADMMKTVKKLSKNKVYVYNTMASILYFFGYMVYWIFTPKYIETQYRQSAAMATM 392

Query:   180 XXXXXXXXXXXXXXXXXXXFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMDEWA 239
                                 I K+KP+AR +AAW AI   +   G+     IGC      
Sbjct:   393 ATGTVALGFSAAGILISGYVISKYKPSARAMAAWNAIVDFVTVAGILCYVAIGCE----- 447

Query:   240 GLTNANGISSFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGC 286
             G    N +++     + +  C CD+  + P+C  D  T+ SACHAGC
Sbjct:   448 GSDRLNTLTTLSAGNSCSASCHCDYVHYAPVCSADNITFISACHAGC 494

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0015711 "organic anion transport" evidence=ISS

GO:0005215 "transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|F1N3T5 SLCO4C1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 419 (152.6 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 96/303 (31%), Positives = 145/303 (47%)

Query:     2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPS-- 59
             G T +YTLG  +IDD+V   +S LY  I   + ILGP++G++LG     LY+D+ +    
Sbjct:   231 GGTPLYTLGTAFIDDSVPIHKSSLYIGIGYAMSILGPAVGYVLGGQLLTLYIDVDLKHSI 290

Query:    60 DITPSDPRWIGAWWLGXXXXXXXXXXXXXXXXXXPKTLTKASPVN-GTTTVATLPTKKES 118
             DIT  DPRW+GAWW+G                  PK L   + +  G  +        ++
Sbjct:   291 DITEDDPRWLGAWWIGFLISWLLAWSLIIPFSCFPKHLPGTAKIQEGKVSQTHQSASLQA 350

Query:   119 NQKN--PSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHT 176
                N   S KDFP A+K L++N + M    S+    L   G  TFLPK+ E QF L S +
Sbjct:   351 TDGNFGQSFKDFPAALKNLMRNTVFMCLVLSTCSEALITTGFATFLPKFIENQFGLSSSS 410

Query:   177 ANXXXXXXXXXXXXXXXXXXXXFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMD 236
             A                      + KFK   + +  +  +T+V+  +   +  +  C  +
Sbjct:   411 AATLAGTVLIPGAALGQILGGVLVSKFKMMCKNIMKFALLTSVISLVLTFVFAYANCENE 470

Query:   237 EWAGLTNA-NGISSFEPMCATTHG-CECDHSKFNPICGGDGRTYFSACHAGC-QNISSID 293
              +AG++ + NG      + A  +  C C  S + P+CGG+G  YFS C+AGC Q++S I 
Sbjct:   471 PFAGVSESYNGTGELGNLTAPCNAHCNCLRSYYYPVCGGNGVQYFSPCYAGCTQSVSKIH 530

Query:   294 GKV 296
              KV
Sbjct:   531 PKV 533

GO:0016020 "membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

UNIPROTKB|F1RN62 SLCO4C1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 415 (151.1 bits), Expect = 3.6e-38, P = 3.6e-38
 Identities = 97/303 (32%), Positives = 142/303 (46%)

Query:     2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPS-- 59
             G T +YTLG  +IDD+V   +S LY  I   + +LGP+ G++LG     +Y+D+      
Sbjct:   233 GGTPLYTLGTAFIDDSVPTHKSSLYIGIGFAMSVLGPAFGYVLGGQLLTVYIDVDSGQSI 292

Query:    60 DITPSDPRWIGAWWLGXXXXXXXXXXXXXXXXXXPKTLTKASPV-NGTTTVATLPTKKES 118
             D+T  DPRW+GAWW+G                  PK L     + +G  + A      + 
Sbjct:   293 DVTEDDPRWLGAWWIGFLLSWLLAWSLIIPFSCFPKHLPGTEEIQDGKISQAHQSGSVQH 352

Query:   119 NQKN--PSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHT 176
               +N   S KDFP AVK L++N + M    S+    L   G  TFLPK+ E QF   S +
Sbjct:   353 TDRNFGQSFKDFPAAVKNLMRNTVFMCLVLSTCSEALVATGFATFLPKFVENQFGFSSSS 412

Query:   177 ANXXXXXXXXXXXXXXXXXXXXFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPMD 236
             A                      + KFK   + +  +  +T V+  +   +  +  C   
Sbjct:   413 AATLAGSVLVPGAALGQILGGMLVSKFKMTCKNIMKFTLLTTVIALILSLVFLYTTCENA 472

Query:   237 EWAGLTNA-NGISSFEPMCATTHG-CECDHSKFNPICGGDGRTYFSACHAGCQN-ISSID 293
              +AG++ + NG+SS   + A  +  C C  S + P+CGGDG  YFS C+AGC N IS   
Sbjct:   473 PFAGVSESYNGLSSVVHIIAPCNANCNCLRSYYYPLCGGDGVQYFSPCYAGCTNSISKKH 532

Query:   294 GKV 296
              KV
Sbjct:   533 PKV 535

GO:0016020 "membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

UNIPROTKB|J9NWB2 SLCO4C1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 406 (148.0 bits), Expect = 8.4e-38, P = 8.4e-38
 Identities = 98/300 (32%), Positives = 141/300 (47%)

Query:     2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDI 61
             G T +YTLG  +IDD+V   +S LY  I   + ILGP++G++LG     LY+D+ +   I
Sbjct:   104 GGTPLYTLGTAFIDDSVPTHKSSLYIGIGYSMSILGPAIGYVLGGQLLTLYIDVDMGKSI 163

Query:    62 --TPSDPRWIGAWWLGXXXXXXXXXXXXXXXXXXPKTLTKASPVNGTTTVATLPTKKES- 118
               +  DPRW+GAWW+G                  PK L   + ++   T  T   K  S 
Sbjct:   164 GISEDDPRWLGAWWIGFLLCWIFAWSLIIPFLCFPKHLPGTAKLHSERTCQTHKEKSSSL 223

Query:   119 --NQKN--PSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPS 174
                ++N   SLKDFP A+K L+ N + M    S+    L   G  TFLPK+ E QF L S
Sbjct:   224 KDTEENFGTSLKDFPTALKNLMGNTVFMCLVLSTSSEALITTGFATFLPKFIENQFGLSS 283

Query:   175 HTANXXXXXXXXXXXXXXXXXXXXFILKFKPNARFVAAWIAITA-VLYALGMGILTFIGC 233
               A                      + K K   +    +  +T+ V +AL   +  +  C
Sbjct:   284 SFAATLAGAVLIPGAALGQILGGVLVSKLKMTCKNTMKFALLTSLVAFALSF-VFVYANC 342

Query:   234 PMDEWAGLTNA-NGISSFEPMCATTHG-CECDHSKFNPICGGDGRTYFSACHAGCQNISS 291
               + +AG++ + NG  +   + A  +  C C  S + PICGGDG  YFS C AGC N +S
Sbjct:   343 ENEPFAGVSESYNGTGNLGNLTAPCNSNCHCLRSYYYPICGGDGIQYFSPCFAGCANSTS 402

GO:0016020 "membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

MGI|MGI:1351867 Slco3a1 "solute carrier organic anion transporter family, member 3a1" [Mus musculus (taxid:10090)]

 Score = 236 (88.1 bits), Expect = 9.7e-38, Sum P(2) = 9.7e-38
 Identities = 52/128 (40%), Positives = 70/128 (54%)

Query:     1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVD-LSIPS 59
             +G T V  LG+ YIDD+V  ++S LY  I   + + GP+ GFILGSFCT++YVD + I +
Sbjct:   189 IGATPVQPLGVSYIDDHVRRKDSSLYIGILFTMLVFGPACGFILGSFCTKIYVDAVFIDT 248

Query:    60 ---DITPSDPRWIGAWWLGXXXXXXXXXXXXXXXXXXPKTLTKASPVNGTTTVATLPTKK 116
                DITP DPRWIGAWW G                  P++L   S     +  A LP ++
Sbjct:   249 SNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSDPGMESEQAMLP-ER 307

Query:   117 ESNQKNPS 124
             E  +  PS
Sbjct:   308 EYERPKPS 315

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=ISO

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISO

GO:0009925 "basal plasma membrane" evidence=ISO

GO:0009986 "cell surface" evidence=ISO

GO:0015198 "oligopeptide transporter activity" evidence=ISO

GO:0015711 "organic anion transport" evidence=ISO

GO:0015732 "prostaglandin transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=ISO

GO:0034220 "ion transmembrane transport" evidence=ISO

UNIPROTKB|F1Q4E0 SLCO4C1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 406 (148.0 bits), Expect = 1.4e-37, P = 1.4e-37
 Identities = 98/300 (32%), Positives = 141/300 (47%)

Query:     2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDI 61
             G T +YTLG  +IDD+V   +S LY  I   + ILGP++G++LG     LY+D+ +   I
Sbjct:   130 GGTPLYTLGTAFIDDSVPTHKSSLYIGIGYSMSILGPAIGYVLGGQLLTLYIDVDMGKSI 189

Query:    62 --TPSDPRWIGAWWLGXXXXXXXXXXXXXXXXXXPKTLTKASPVNGTTTVATLPTKKES- 118
               +  DPRW+GAWW+G                  PK L   + ++   T  T   K  S 
Sbjct:   190 GISEDDPRWLGAWWIGFLLCWIFAWSLIIPFLCFPKHLPGTAKLHSERTCQTHKEKSSSL 249

Query:   119 --NQKN--PSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPS 174
                ++N   SLKDFP A+K L+ N + M    S+    L   G  TFLPK+ E QF L S
Sbjct:   250 KDTEENFGTSLKDFPTALKNLMGNTVFMCLVLSTSSEALITTGFATFLPKFIENQFGLSS 309

Query:   175 HTANXXXXXXXXXXXXXXXXXXXXFILKFKPNARFVAAWIAITA-VLYALGMGILTFIGC 233
               A                      + K K   +    +  +T+ V +AL   +  +  C
Sbjct:   310 SFAATLAGAVLIPGAALGQILGGVLVSKLKMTCKNTMKFALLTSLVAFALSF-VFVYANC 368

Query:   234 PMDEWAGLTNA-NGISSFEPMCATTHG-CECDHSKFNPICGGDGRTYFSACHAGCQNISS 291
               + +AG++ + NG  +   + A  +  C C  S + PICGGDG  YFS C AGC N +S
Sbjct:   369 ENEPFAGVSESYNGTGNLGNLTAPCNSNCHCLRSYYYPICGGDGIQYFSPCFAGCANSTS 428

GO:0016020 "membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

UNIPROTKB|F1NSG0 SLCO3A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 233 (87.1 bits), Expect = 1.6e-37, Sum P(2) = 1.6e-37
 Identities = 52/128 (40%), Positives = 68/128 (53%)

Query:     1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVD-LSIPS 59
             +G T V  LG+ YIDD+V  ++S LY  I   + + GP+ GFILGSFCT++YVD + I +
Sbjct:   188 IGATPVQPLGVSYIDDHVRRKDSSLYIGILFTMLVFGPACGFILGSFCTKIYVDAVFIDT 247

Query:    60 ---DITPSDPRWIGAWWLGXXXXXXXXXXXXXXXXXXPKTLTKASPVNGTTTVATLPTKK 116
                DITP DPRWIGAWW G                  P++L       G +  A LP + 
Sbjct:   248 SKLDITPDDPRWIGAWWGGFLLCGALLFFSSLPMFGFPQSLPPRPEHAGESEQAMLPDRD 307

Query:   117 ESNQKNPS 124
                 K PS
Sbjct:   308 YERPK-PS 314

GO:0005215 "transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1Q3M7 SLCO3A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 234 (87.4 bits), Expect = 2.3e-37, Sum P(2) = 2.3e-37
 Identities = 52/128 (40%), Positives = 70/128 (54%)

Query:     1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVD-LSIPS 59
             +G T V  LG+ YIDD+V  ++S LY  I   + + GP+ GFILGSFCT++YVD + I +
Sbjct:   189 IGATPVQPLGVSYIDDHVRRKDSSLYIGILFTMLVFGPACGFILGSFCTKIYVDAVFIDT 248

Query:    60 ---DITPSDPRWIGAWWLGXXXXXXXXXXXXXXXXXXPKTLTKASPVNGTTTVATLPTKK 116
                DITP DPRWIGAWW G                  P++L   S     +  A LP ++
Sbjct:   249 SNLDITPDDPRWIGAWWGGFLLCGALLFFSSLLMFGFPQSLPPHSDPAMESEQAMLP-ER 307

Query:   117 ESNQKNPS 124
             E  +  PS
Sbjct:   308 EYERPKPS 315

GO:0016020 "membrane" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	308
pfam03137	582	pfam03137, OATP, Organic Anion Transporter Polypep	1e-100
TIGR00805	633	TIGR00805, oat, sodium-independent organic anion t	2e-69
cd01330	54	cd01330, KAZAL_SLC21, The kazal-type serine protea	3e-12
pfam07648	42	pfam07648, Kazal_2, Kazal-type serine protease inh	8e-08
cd00104	41	cd00104, KAZAL_FS, Kazal type serine protease inhi	2e-06
smart00280	46	smart00280, KAZAL, Kazal type serine protease inhi	8e-04

>gnl|CDD|217384 pfam03137, OATP, Organic Anion Transporter Polypeptide (OATP) family

 Score =  304 bits (782), Expect = e-100
 Identities = 124/310 (40%), Positives = 165/310 (53%), Gaps = 21/310 (6%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD 60
           +G T ++TLGI YIDDNV ++ SPLY  I   + + GP++GF+LGSFC RLYVD      
Sbjct: 151 IGATPIFTLGISYIDDNVKSKNSPLYLGILFTMAMFGPAIGFLLGSFCLRLYVDFGRVPT 210

Query: 61  ----ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKK 116
               ITP+DPRW+GAWWLG ++     +L+A+  F FPKTL KA     +    + P  K
Sbjct: 211 EDVIITPTDPRWVGAWWLGFLVCGGLALLSAIPFFFFPKTLPKAQGRLESLD-LSRPKAK 269

Query: 117 ESNQKNPS-----------LKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKY 165
           +  +K              LKDFPK +KRLL N   M    + V     IAG  TFLPKY
Sbjct: 270 DETRKQAEEPKSGKSAPDFLKDFPKTLKRLLTNPTFMLVVLAQVFESSVIAGYSTFLPKY 329

Query: 166 FETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGM 225
            ETQ+ L +  AN + GV  +    +GI+L G+ I KFK  AR +A +     ++     
Sbjct: 330 LETQYGLSASYANFLIGVVNLPAAAVGILLGGLIIKKFKLTARGMAKFAIFVILVSLAFY 389

Query: 226 GILTFIGCPMDEWAGLTNANGISS-----FEPMCATTHGCECDHSKFNPICGGDGRTYFS 280
               FIGC     AG+T +   S       EP+ +    C CD S F P+CG +G TY S
Sbjct: 390 LPYFFIGCENSPVAGVTPSYENSPSDSHHLEPLSSCNEDCSCDTSFFPPVCGDNGLTYLS 449

Query: 281 ACHAGCQNIS 290
            CHAG  +  
Sbjct: 450 PCHAGSSSSG 459

This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules). Thus, Tamai et al. initiated the current scheme of using digits for rat OATPs and letters for human ones. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the Swiss-Prot database) as belonging to the SLC21 family of transporters. Length = 582

>gnl|CDD|233136 TIGR00805, oat, sodium-independent organic anion transporter

 Score =  226 bits (579), Expect = 2e-69
 Identities = 113/300 (37%), Positives = 160/300 (53%), Gaps = 18/300 (6%)

Query: 1   MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDL-SIPS 59
           +G T ++ LGI YIDD   ++ SPLY  I   + + GP+ G++LGSFC ++YVD  S+ +
Sbjct: 184 IGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNT 243

Query: 60  D---ITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTL---TKASPVNGTTTVATLP 113
           +   +TP+DPRWIGAWW+G ++     +L ++ +F FPK L    K   V+   T     
Sbjct: 244 EDVILTPTDPRWIGAWWIGFLICGGVALLTSIPLFFFPKALPKEGKRVNVDVHETEKLEK 303

Query: 114 TKKESNQKNPS-LKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRL 172
           ++ ES +KN    KDFPK +KRLL N I M    + V+  L   G  TFLPKY E Q+ +
Sbjct: 304 SEDESRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGI 363

Query: 173 PSHTANMVSGVGGILVMGIGIILSGV----FILKFKPNARFVAAWIAITAVLYALGMGIL 228
            S  AN + GV  +   G+G ++ G     F L  K  A F      ++ +L +     L
Sbjct: 364 SSAEANFLIGVVNVPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSP----L 419

Query: 229 TFIGCPMDEWAGLTNANGISSFEPMCATT--HGCECDHSKFNPICGGDGRTYFSACHAGC 286
             IGC     AG+ N +   S      T     C CD S F+P+CG +G  Y S CHAGC
Sbjct: 420 FLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGC 479

The Organo Anion Transporter (OAT) Family (TC 2.A.60)Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange. Length = 633

>gnl|CDD|238650 cd01330, KAZAL_SLC21, The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake

 Score = 60.4 bits (147), Expect = 3e-12
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 259 GCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKV 296
            C C  S ++P+CG +G TYFS CHAGC N +   G  
Sbjct: 8   NCSCSESAYSPVCGENGITYFSPCHAGCTNSTGSGGSK 45

The KAZAL_SLC21 domain is a member of the superfamily of kazal-like proteinase inhibitors and follistatin-like proteins. Length = 54

>gnl|CDD|191798 pfam07648, Kazal_2, Kazal-type serine protease inhibitor domain

 Score = 47.3 bits (113), Expect = 8e-08
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 262 CDHSKFNPICGGDGRTYFSACHAGCQN 288
           C      P+CG DG+TY + C   C +
Sbjct: 1   CPRENDEPVCGSDGKTYSNKCALCCAS 27

Usually indicative of serine protease inhibitors. However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays. Small alpha+beta fold containing three disulphides. Length = 42

>gnl|CDD|238052 cd00104, KAZAL_FS, Kazal type serine protease inhibitors and follistatin-like domains

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)

Query: 262 CDHSKFNPICGGDGRTYFSACHAGCQN 288
           C   +++P+CG DG+TY + CH GC  
Sbjct: 1   CP-KEYDPVCGSDGKTYSNECHLGCAA 26

Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor. Follistatin-like family members include SPARC, also known as, BM-40 or osteonectin, the Gallus gallus Flik protein, as well as, agrin which has a long array of FS domains. The kazal-type inhibitor domain has also been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The distant homolog, Ascidian trypsin inhibitor, is included in this CD. Length = 41

>gnl|CDD|197624 smart00280, KAZAL, Kazal type serine protease inhibitors

 Score = 36.1 bits (84), Expect = 8e-04
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 6/38 (15%)

Query: 261 ECD---HSKFNPICGGDGRTYFSACH---AGCQNISSI 292
           +C      +++P+CG DG TY + CH   A C++  SI
Sbjct: 1   DCPEACPREYDPVCGSDGVTYSNECHLCKAACESGKSI 38

Kazal type serine protease inhibitors and follistatin-like domains. Length = 46

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	308
KOG3626|consensus	735		100.0
TIGR00805	633	oat sodium-independent organic anion transporter.	100.0
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	100.0
cd01330	54	KAZAL_SLC21 The kazal-type serine protease inhibit	99.85
KOG2532|consensus	466		99.68
KOG1330|consensus	493		99.67
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.67
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.64
TIGR00893	399	2A0114 d-galactonate transporter.	99.61
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.6
PRK11663	434	regulatory protein UhpC; Provisional	99.59
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.58
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.56
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.53
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.52
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.51
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.51
TIGR00901	356	2A0125 AmpG-related permease.	99.5
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.5
PRK03545	390	putative arabinose transporter; Provisional	99.49
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.48
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.47
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.47
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.47
TIGR00900	365	2A0121 H+ Antiporter protein.	99.46
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.46
PRK11902	402	ampG muropeptide transporter; Reviewed	99.46
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.46
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.46
PRK11010	491	ampG muropeptide transporter; Validated	99.45
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.45
PLN00028	476	nitrate transmembrane transporter; Provisional	99.44
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.43
KOG2533|consensus	495		99.43
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.43
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.42
PRK09705	393	cynX putative cyanate transporter; Provisional	99.41
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.41
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.41
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.4
PRK10642	490	proline/glycine betaine transporter; Provisional	99.39
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.38
PRK10133	438	L-fucose transporter; Provisional	99.38
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.38
PRK10091	382	MFS transport protein AraJ; Provisional	99.38
PRK03699	394	putative transporter; Provisional	99.37
PRK10489	417	enterobactin exporter EntS; Provisional	99.37
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.37
PRK09952	438	shikimate transporter; Provisional	99.36
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.35
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.35
PRK11043	401	putative transporter; Provisional	99.35
TIGR00895	398	2A0115 benzoate transport.	99.34
TIGR00891	405	2A0112 putative sialic acid transporter.	99.34
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.33
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.32
PRK15075	434	citrate-proton symporter; Provisional	99.32
PRK12307	426	putative sialic acid transporter; Provisional	99.31
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.3
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.29
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.28
PRK10504	471	putative transporter; Provisional	99.26
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.23
PRK15011	393	sugar efflux transporter B; Provisional	99.23
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.22
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.2
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.2
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.19
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.19
PRK03633	381	putative MFS family transporter protein; Provision	99.19
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.18
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.17
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.07
PRK09874	408	drug efflux system protein MdtG; Provisional	99.05
PRK03893	496	putative sialic acid transporter; Provisional	99.01
PRK09528	420	lacY galactoside permease; Reviewed	99.01
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.0
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	98.99
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	98.97
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.95
PRK10054	395	putative transporter; Provisional	98.95
PRK05122	399	major facilitator superfamily transporter; Provisi	98.93
TIGR00898	505	2A0119 cation transport protein.	98.92
PRK12382	392	putative transporter; Provisional	98.89
cd00104	41	KAZAL_FS Kazal type serine protease inhibitors and	98.89
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	98.87
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.78
PRK10207	489	dipeptide/tripeptide permease B; Provisional	98.76
KOG3764|consensus	464		98.71
PF13347	428	MFS_2: MFS/sugar transport protein	98.67
KOG2504|consensus	509		98.66
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	98.66
KOG2563|consensus	480		98.66
KOG2615|consensus	451		98.64
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.59
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	98.5
PRK09848	448	glucuronide transporter; Provisional	98.43
cd01327	45	KAZAL_PSTI Kazal-type pancreatic secretory trypsin	98.42
PRK09669	444	putative symporter YagG; Provisional	98.38
PRK11462	460	putative transporter; Provisional	98.37
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	98.37
PRK10429	473	melibiose:sodium symporter; Provisional	98.28
KOG0569|consensus	485		98.26
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	98.23
KOG0254|consensus	513		98.18
PF07648	42	Kazal_2: Kazal-type serine protease inhibitor doma	98.18
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.09
COG2211	467	MelB Na+/melibiose symporter and related transport	98.05
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	98.04
PRK09584	500	tppB putative tripeptide transporter permease; Rev	98.04
COG2270	438	Permeases of the major facilitator superfamily [Ge	97.96
KOG2816|consensus	463		97.93
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	97.9
PF00050	48	Kazal_1: Kazal-type serine protease inhibitor doma	97.89
smart00280	46	KAZAL Kazal type serine protease inhibitors. Kazal	97.87
TIGR00788	468	fbt folate/biopterin transporter. The only functio	97.87
KOG0252|consensus	538		97.8
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	97.76
PRK09528	420	lacY galactoside permease; Reviewed	97.71
KOG4686|consensus	459		97.66
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	97.56
KOG0255|consensus	521		97.48
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	97.44
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	97.42
PRK15462	493	dipeptide/tripeptide permease D; Provisional	97.41
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	97.39
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	97.32
PRK15462	493	dipeptide/tripeptide permease D; Provisional	97.3
PRK10054	395	putative transporter; Provisional	97.29
PRK09584	500	tppB putative tripeptide transporter permease; Rev	97.24
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	97.23
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	97.21
PRK05122	399	major facilitator superfamily transporter; Provisi	97.17
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	97.14
PRK12382	392	putative transporter; Provisional	97.13
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	97.02
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	97.02
KOG2325|consensus	488		96.81
PF12832	77	MFS_1_like: MFS_1 like family	96.8
PRK10489	417	enterobactin exporter EntS; Provisional	96.66
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	96.63
KOG0253|consensus	528		96.61
PRK10207	489	dipeptide/tripeptide permease B; Provisional	96.55
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	96.52
cd01328	86	FSL_SPARC Follistatin-like SPARC (secreted protein	96.51
PRK11043	401	putative transporter; Provisional	96.51
PRK09874	408	drug efflux system protein MdtG; Provisional	96.5
PRK03633	381	putative MFS family transporter protein; Provision	96.45
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	96.44
TIGR00892	455	2A0113 monocarboxylate transporter 1.	96.42
PRK11646	400	multidrug resistance protein MdtH; Provisional	96.41
PRK15011	393	sugar efflux transporter B; Provisional	96.39
PRK11663	434	regulatory protein UhpC; Provisional	96.3
PRK03699	394	putative transporter; Provisional	96.3
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	96.26
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	96.18
PRK10504	471	putative transporter; Provisional	96.16
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	96.09
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	96.08
PTZ00207	591	hypothetical protein; Provisional	96.04
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	96.03
PLN00028	476	nitrate transmembrane transporter; Provisional	96.01
PRK11652	394	emrD multidrug resistance protein D; Provisional	95.98
PRK09848	448	glucuronide transporter; Provisional	95.95
TIGR00893	399	2A0114 d-galactonate transporter.	95.95
TIGR00891	405	2A0112 putative sialic acid transporter.	95.91
TIGR00898	505	2A0119 cation transport protein.	95.88
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	95.84
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	95.79
TIGR00897	402	2A0118 polyol permease family. This family of prot	95.7
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	95.69
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	95.64
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	95.62
PRK09705	393	cynX putative cyanate transporter; Provisional	95.62
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	95.58
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	95.55
PRK11195	393	lysophospholipid transporter LplT; Provisional	95.53
PRK03893	496	putative sialic acid transporter; Provisional	95.53
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	95.49
PRK10133	438	L-fucose transporter; Provisional	95.45
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	95.39
PRK10091	382	MFS transport protein AraJ; Provisional	95.37
PRK10473	392	multidrug efflux system protein MdtL; Provisional	95.22
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	95.11
PRK09669	444	putative symporter YagG; Provisional	95.09
PRK12307	426	putative sialic acid transporter; Provisional	95.09
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	95.05
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	95.03
TIGR00805	633	oat sodium-independent organic anion transporter.	94.99
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	94.94
KOG3098|consensus	461		94.93
PRK03545	390	putative arabinose transporter; Provisional	94.82
PRK10642	490	proline/glycine betaine transporter; Provisional	94.75
PRK10429	473	melibiose:sodium symporter; Provisional	94.75
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	94.73
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	94.7
TIGR00895	398	2A0115 benzoate transport.	94.7
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	94.7
TIGR00900	365	2A0121 H+ Antiporter protein.	94.69
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	94.61
COG3202	509	ATP/ADP translocase [Energy production and convers	94.55
TIGR00788	468	fbt folate/biopterin transporter. The only functio	94.55
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	94.48
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	94.16
PRK10077	479	xylE D-xylose transporter XylE; Provisional	94.1
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	94.06
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	94.03
PRK09952	438	shikimate transporter; Provisional	93.96
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	93.93
PRK10213	394	nepI ribonucleoside transporter; Reviewed	93.76
KOG3762|consensus	618		93.7
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	93.58
COG2270	438	Permeases of the major facilitator superfamily [Ge	93.35
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	93.15
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	92.7
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	92.46
PRK15403	413	multidrug efflux system protein MdtM; Provisional	92.18
PRK11902	402	ampG muropeptide transporter; Reviewed	92.03
PRK14995	495	methyl viologen resistance protein SmvA; Provision	91.94
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	91.43
KOG4578|consensus	421		91.42
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	91.02
PRK11010	491	ampG muropeptide transporter; Validated	90.91
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	90.78
PRK11462	460	putative transporter; Provisional	90.69
PTZ00207	591	hypothetical protein; Provisional	90.68
KOG2615|consensus	451		90.46
PRK15075	434	citrate-proton symporter; Provisional	90.3
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	90.16
PF13347	428	MFS_2: MFS/sugar transport protein	89.94
PRK10406	432	alpha-ketoglutarate transporter; Provisional	89.63
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	89.49
TIGR00896	355	CynX cyanate transporter. This family of proteins	89.46
KOG0637|consensus	498		89.24
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	88.75
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	88.74
COG2211	467	MelB Na+/melibiose symporter and related transport	88.58
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	87.95
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	87.12
KOG3762|consensus	618		84.44
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	82.17
KOG3810|consensus	433		81.94
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	81.6
PF02554	376	CstA: Carbon starvation protein CstA; InterPro: IP	81.41
KOG4686|consensus	459		81.04

>KOG3626|consensus

Probab=100.00  E-value=1.8e-74  Score=563.04  Aligned_cols=304  Identities=44%  Similarity=0.827  Sum_probs=272.8

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCC-CCCCCCCCCCchhHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLS-IPSDITPSDPRWIGAWWLGLVLV   79 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~-~~~~~~~~~~~W~gaWw~~fii~   79 (308)
                      ||++|++|+|++|||||++++++++|+|+++++.++||++|+++|++++++|+|++ ....++|.||||+||||+||+++
T Consensus       249 IG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~  328 (735)
T KOG3626|consen  249 IGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLIC  328 (735)
T ss_pred             cCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHH
Confidence            79999999999999999999999999999999999999999999999999999994 55789999999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCc----cccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHH
Q psy11785         80 AVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTK----KESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPI  155 (308)
Q Consensus        80 g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~  155 (308)
                      |.+.++.++++++|||++|+..+++..++.+....+    ++++...+.++|+|+..++|++||+|++.+++.+++..++
T Consensus       329 g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~  408 (735)
T KOG3626|consen  329 GALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAI  408 (735)
T ss_pred             HHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence            999999999999999999987653222111111110    1122223356799999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHHhHHHhcCCCC
Q psy11785        156 AGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIGCPM  235 (308)
Q Consensus       156 ~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~  235 (308)
                      .|+.+|+|||||+|||++++.|++++|.+.+|++++|.++||++++|++++.|++++++++++++++++.++++++||++
T Consensus       409 ~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~  488 (735)
T KOG3626|consen  409 TGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCES  488 (735)
T ss_pred             hhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999989999999999


Q ss_pred             CCccccccCCCCC-------CcccCCCCCCCccCCCCCcceeeCCCCceecCccccccccccccCCCceEEEeeEeee
Q psy11785        236 DEWAGLTNANGIS-------SFEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAIS  306 (308)
Q Consensus       236 ~~~ag~~~~~~~~-------~~~~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~~~~~~~~~~~~~~~~  306 (308)
                      .+++|++.++.+.       ++.++||++  |+|++++|+||||+||+||||||||||++....+.+++.|++|+|+.
T Consensus       489 ~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~--C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~  564 (735)
T KOG3626|consen  489 SPVAGVTNSYEGSPAFTSHENPFSSCNSD--CSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVP  564 (735)
T ss_pred             CcccceecCCCCCCccccCCCchhhhhcC--CCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccc
Confidence            9999999765322       145679999  99999999999999999999999999999988888899999999985

>TIGR00805 oat sodium-independent organic anion transporter

Probab=100.00  E-value=3.8e-60  Score=470.91  Aligned_cols=303  Identities=36%  Similarity=0.710  Sum_probs=255.8

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC----CCCCCCCCCchhHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSI----PSDITPSDPRWIGAWWLGL   76 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~----~~~~~~~~~~W~gaWw~~f   76 (308)
                      +|+++.++++.+|+||++|+++|++++|+++++..+||++||++|+++++.|+||+.    +.+++|+||||+|+||++|
T Consensus       184 iG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~F  263 (633)
T TIGR00805       184 IGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGF  263 (633)
T ss_pred             ccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHH
Confidence            588999999999999999999999999999999999999999999999999998853    2468999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCCccC-Cc-ccccCCCcc--ccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHH
Q psy11785         77 VLVAVFLMLAAVAMFMFPKTLTKASPVNG-TT-TVATLPTKK--ESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHI  152 (308)
Q Consensus        77 ii~g~~~ll~~i~~~~~p~~~p~~~~~~~-~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~  152 (308)
                      ++.+++.++.+++++++|+++|+..++.+ +. +.....+..  .+.+.....+++++.+++++|||.|+...++.++..
T Consensus       264 li~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~  343 (633)
T TIGR00805       264 LICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDS  343 (633)
T ss_pred             HHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence            99999998888888999999886432111 00 000000000  000011123457788999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHHhHHHhcC
Q psy11785        153 LPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIG  232 (308)
Q Consensus       153 ~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (308)
                      .+++++.+|+|+|+|+++|+++++++++++...++++++|.+++|+++||++++.+++++++++++++++++..+.++++
T Consensus       344 ~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (633)
T TIGR00805       344 LAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIG  423 (633)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeec
Confidence            99999999999999999999999999998877777788999999999999999999999999999999998888888999


Q ss_pred             CCCCCccccccCCCCC---Cccc-CCCCCCCccCCCCCcceeeCCCCceecCccccccccccccCCCceEEEeeEeee
Q psy11785        233 CPMDEWAGLTNANGIS---SFEP-MCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAIS  306 (308)
Q Consensus       233 C~~~~~ag~~~~~~~~---~~~~-~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~~~~~~~~~~~~~~~~  306 (308)
                      |++.++||++.+|++.   +.++ +||++  |+|+.++|+||||+||+||||||||||+++.. ++.+++|++|+||.
T Consensus       424 C~~~~~agv~~~y~~~~~~~~~~~~Cn~~--C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~-~~~~~~y~~CsCi~  498 (633)
T TIGR00805       424 CESAPVAGVNNPSTDQSIYVENPTDCNRQ--CSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVG-TGSNMVYTNCSCVQ  498 (633)
T ss_pred             CCCCccceeeccCCCcccCCCChhccCCC--CCCCCCCcccccCCCCCEEECccccCCCCccC-CCCcceeccccccc
Confidence            9999999999876432   3455 89999  99999999999999999999999999996543 44456799999983

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=100.00  E-value=5.4e-54  Score=417.98  Aligned_cols=262  Identities=42%  Similarity=0.800  Sum_probs=1.6

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC----CCCCCCCchhHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPS----DITPSDPRWIGAWWLGL   76 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~----~~~~~~~~W~gaWw~~f   76 (308)
                      +|++|+||+|.+|||||+++++.+.|+|+++++..+||++|+++||+++++|+|++.++    +++|+||||+||||+||
T Consensus       153 iG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGf  232 (539)
T PF03137_consen  153 IGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGF  232 (539)
T ss_dssp             SS------------------------------------------------------------------------------
T ss_pred             ccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHH
Confidence            69999999999999999999999999999999999999999999999999999998654    78999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCCccCCcc-----cccCC-Cc-cccc---cCCCCCCcchHHHHHhhcChHHHHHHH
Q psy11785         77 VLVAVFLMLAAVAMFMFPKTLTKASPVNGTTT-----VATLP-TK-KESN---QKNPSLKDFPKAVKRLLKNDILMYRTA  146 (308)
Q Consensus        77 ii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~-----~~~~~-~~-~~~~---~~~~~~~~~~~~~~~Ll~n~~f~~~~l  146 (308)
                      ++.|++.++.++++++|||++|+.++.++.++     .+... +. .+++   .....++++++++++|+|||+|++.++
T Consensus       233 li~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~l  312 (539)
T PF03137_consen  233 LICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLIL  312 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHH
Confidence            99999999999999999999998732211110     00000 00 0111   112456899999999999999999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHHh
Q psy11785        147 SSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMG  226 (308)
Q Consensus       147 ~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~~  226 (308)
                      +.+++.+++.|+.+|+|||+|+||++++++|++++|.+.+|++++|.++||+++||++++.|+++++++++.+++.+++.
T Consensus       313 a~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~  392 (539)
T PF03137_consen  313 AGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYS  392 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998878


Q ss_pred             HHHhcCCCCCCccccccCCC-CCCcccCCCCCCCccCCC
Q psy11785        227 ILTFIGCPMDEWAGLTNANG-ISSFEPMCATTHGCECDH  264 (308)
Q Consensus       227 ~~~~~~C~~~~~ag~~~~~~-~~~~~~~Cn~~~~C~C~~  264 (308)
                      ++++++||++++||++.+|. +......||..  |.|+.
T Consensus       393 ~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~--~~Cn~  429 (539)
T PF03137_consen  393 PLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLT--CSCNS  429 (539)
T ss_dssp             ---------------------------------------
T ss_pred             HHHeecCCCCceeeecCccccccCCCCCCCCC--CCCCC
Confidence            88899999999999998773 22234456666  55543

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>cd01330 KAZAL_SLC21 The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake

Probab=99.85  E-value=5.5e-22  Score=131.87  Aligned_cols=54  Identities=35%  Similarity=0.905  Sum_probs=46.8

Q ss_pred             cccCCCCCCCccCCCCCcceeeCCCCceecCccccccccccccCCCceEEEeeEeee
Q psy11785        250 FEPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEAIS  306 (308)
Q Consensus       250 ~~~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~~~~~~~~~~~~~~~~  306 (308)
                      +++.||++  |+|+.+.|+||||+||+||||||||||++... ..+.+.|++|+||.
T Consensus         1 ~~~~Cn~~--C~C~~~~~~PVCg~~g~tY~SpC~AGC~~~~~-~~~~~~y~~CsCi~   54 (54)
T cd01330           1 LTSSCNSN--CSCSESAYSPVCGENGITYFSPCHAGCTNSTG-SGGSKIYTNCSCVG   54 (54)
T ss_pred             CccccCCC--CCCCCCCcCCccCCCCCEEcCHhHcCCccccc-CCCceeeccccccC
Confidence            35789999  99999999999999999999999999997653 34456899999984

The KAZAL_SLC21 domain is a member of the superfamily of kazal-like proteinase inhibitors and follistatin-like proteins.

>KOG2532|consensus

Probab=99.68  E-value=2.1e-16  Score=151.86  Aligned_cols=214  Identities=14%  Similarity=0.115  Sum_probs=161.6

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      +++..+|...+++..|.|++||++.+++++++..+|++++..++|++.+..                 .+|...|.+.|+
T Consensus       141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~-----------------~GW~sifY~~g~  203 (466)
T KOG2532|consen  141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESS-----------------LGWPSIFYVFGI  203 (466)
T ss_pred             HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC-----------------CCCchHHHHHHH
Confidence            567788999999999999999999999999999999999999999998741                 148889999999


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      .++++.+.++.+.++.|++++...++|.+.+.++..+++.+++   .+.++++++|++.++...++.+.....++.+.++
T Consensus       204 ~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~---~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y  280 (466)
T KOG2532|consen  204 VGLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKK---PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTY  280 (466)
T ss_pred             HHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCC---CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998888888877654333332222111111111111   2235899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC---ccchhHH-HHHHHHHHHHHHhHHHhcCCCCC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN---ARFVAAW-IAITAVLYALGMGILTFIGCPMD  236 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~C~~~  236 (308)
                      +|+|+++.+|++..+.|++.++.. ..+.+-.+++|++.||+..|   .+...|+ ..+......++++.+.+++|++.
T Consensus       281 ~PtY~~~VL~f~v~~~G~~salP~-l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~  358 (466)
T KOG2532|consen  281 LPTYLKEVLGFDVRETGFLSALPF-LAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHR  358 (466)
T ss_pred             hhHHHHHHhCCChhhhhHHHHHHH-HHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcc
Confidence            999999999999999999876443 34566778999999998653   2233333 34444444444555556777776

>KOG1330|consensus

Probab=99.67  E-value=1.2e-17  Score=155.67  Aligned_cols=177  Identities=17%  Similarity=0.300  Sum_probs=141.3

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      ||+|...|+++++|+|++|.++|++.+++++.+..+|.++|++.|+.+.+.-              .|   ||.+|...|
T Consensus       133 iGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~--------------~~---Wr~af~~~a  195 (493)
T KOG1330|consen  133 IGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT--------------FW---WRWAFRGSA  195 (493)
T ss_pred             cchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc--------------cc---eEEEEEeeh
Confidence            6999999999999999999999999999999999999999999999887642              12   777888899


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      +++++.+++.+++.++.++..+.+.+.+         .+ ...+..+..+.++.+.|+|++...+++.....+...++.-
T Consensus       196 vl~vi~~~L~~~f~~eP~rga~~~~~~~---------~~-~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sw  265 (493)
T KOG1330|consen  196 VLGVIVGLLVFLFVREPERGARDEVDGE---------NK-MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSW  265 (493)
T ss_pred             HHHHHHHHHHHhhccCcccccccccccC---------Cc-CCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccch
Confidence            9988888877766555332222111111         00 0112335677889999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCC--cccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785        161 FLPKYFETQFRLP--SHTANMVSGVGGILVMGIGIILSGVFILKFK  204 (308)
Q Consensus       161 ~~P~yl~~~~gls--~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~  204 (308)
                      |.|++++..+.+.  ..+.+++++.+...+..+|.++||.+.||+.
T Consensus       266 w~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~  311 (493)
T KOG1330|consen  266 WAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLS  311 (493)
T ss_pred             hhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHH
Confidence            9999998877665  5667888888888888999999999999954

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.67  E-value=3.3e-16  Score=150.83  Aligned_cols=185  Identities=14%  Similarity=0.144  Sum_probs=135.8

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      ++++..+|...+++.|++|+++|++++|+..++..+|.++||++++++.+.+                 .+|+..|++.+
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~-----------------~gw~~~f~i~~  205 (465)
T TIGR00894       143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW-----------------GGWPMIFYVFG  205 (465)
T ss_pred             HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------CCCCeehhhhh
Confidence            3678889999999999999999999999999999999999999999876531                 13777788888


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      +..+++.+.++.++++.|+.+++..+++.+...+..++++.+.+   ....++++++++.++...+..+......+.+.+
T Consensus       206 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (465)
T TIGR00894       206 IVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTR---QSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPT  282 (465)
T ss_pred             HHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCC---CCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            87777777776666665644322111111100000000000000   112367899999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      |+|.|+++++|++..+++++..... .+.+++.+++|++.||++.|
T Consensus       283 ~lp~~l~~~~g~s~~~~g~~~~~~~-~~~~i~~~~~g~l~d~~~~~  327 (465)
T TIGR00894       283 YLPTFISWVLRVSGKENGLLSSLPY-LFAWLCSIFAGYLADFLKSS  327 (465)
T ss_pred             HHHHHHHHHhCcChHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999999998765443 35678889999999997543

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.64  E-value=6.8e-16  Score=148.95  Aligned_cols=189  Identities=11%  Similarity=0.059  Sum_probs=130.1

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |++...|...+++.|++|+++|++++|++.++..+|+++|+++..++.+.+..               +.|+..|.+.++
T Consensus       135 ~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~---------------~~~~~~f~~~g~  199 (467)
T PRK09556        135 FQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFD---------------GHVIGMFIFPSI  199 (467)
T ss_pred             HHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhcc---------------CcchhHHHHHHH
Confidence            45666788899999999999999999999999999999999998776653211               125556777777


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccc-cCCCCCCcchHH-HHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESN-QKNPSLKDFPKA-VKRLLKNDILMYRTASSVLHILPIAGLY  159 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~Ll~n~~f~~~~l~~~~~~~~~~~~~  159 (308)
                      +.++.+++++++.++.|++......++........+++ ..+++. +..+. .++++|||.++...+..++.....+++.
T Consensus       200 ~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  278 (467)
T PRK09556        200 IALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDM-TKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGID  278 (467)
T ss_pred             HHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccC-cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence            77766666555545545433211111100000000000 000111 11121 2348899999999988888888888999


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      +|+|.|+++++|+|+.+++++..... .+.++|.+++|++.||+++|.
T Consensus       279 ~~~p~yl~~~~g~s~~~a~~~~~~~~-~~~~ig~~~~G~lsDr~g~r~  325 (467)
T PRK09556        279 NWSPVYAFQELGFSKEDAINTFTLFE-IGALVGSLLWGWLSDLANGRR  325 (467)
T ss_pred             HHHHHHHHHccCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCc
Confidence            99999999999999999988765443 356889999999999998663

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.61  E-value=4.9e-15  Score=137.22  Aligned_cols=187  Identities=16%  Similarity=0.147  Sum_probs=129.3

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+...+...+++.|++|+++|++++++......+|.++||.+++++.+.+                  .|+..|.+.++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~~~~~~~~~~  156 (399)
T TIGR00893        95 AEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF------------------SWQWAFIIEGV  156 (399)
T ss_pred             HHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC------------------CchHHHHHHHH
Confidence            445677888999999999999999999999999999999999999877532                  25666777766


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccc-cCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVA-TLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      ..++..+..+.+.++.|++++...+++.. ..+...++.+.++..+......+++++||.++...+..++.......+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (399)
T TIGR00893       157 LGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLT  236 (399)
T ss_pred             HHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHH
Confidence            66555555444444333322111110000 00000000000001112233467889999999888888888888999999


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      ++|.|+++.+|.++.+++++.....+ ..+++.+++|++.||+++|.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~  282 (399)
T TIGR00893       237 WFPTYLVQERGLSILEAGFMASLPGI-VGFIGMILGGRLSDLLLRRG  282 (399)
T ss_pred             HHHHHHHHHhcccHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHhhcc
Confidence            99999999999999998887654433 45788999999999998764

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.60  E-value=6.7e-15  Score=136.26  Aligned_cols=186  Identities=15%  Similarity=0.171  Sum_probs=138.1

Q ss_pred             cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHH--HhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILG--SFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lG--g~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .-+|-....|..|++++|||++.++++++-.+|.++.|++.  +++...+                  .|+.+|++-|++
T Consensus       133 ~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~------------------~w~~~f~~pgii  194 (448)
T COG2271         133 MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG------------------GWRAAFYFPGII  194 (448)
T ss_pred             CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc------------------chhHHHHHHHHH
Confidence            34566778899999999999999999999999999999888  6554322                  388999999999


Q ss_pred             HHHHHHHHHhccCCCCCCCCccCCcc-c-ccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         83 LMLAAVAMFMFPKTLTKASPVNGTTT-V-ATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        83 ~ll~~i~~~~~p~~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      .+++++..++.-|+.|++.-...-++ . +..+..+++++. +.........+.+++||..|.+.++.++.+.+=++..-
T Consensus       195 aiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~-~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~d  273 (448)
T COG2271         195 AIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKEN-EGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGIND  273 (448)
T ss_pred             HHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccC-CCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhh
Confidence            99999887777777776542111000 0 000000111111 11211223567899999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccch
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFV  210 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~  210 (308)
                      |.|.|+.++.|+|..+++...+..= .+++.|+++.||++||+-...|..
T Consensus       274 W~p~YL~e~k~~s~~~a~~a~~lfE-~agl~G~Ll~GwlSDklfkgrR~p  322 (448)
T COG2271         274 WGPLYLSEVKGFSLVKANWAISLFE-VAGLPGTLLAGWLSDKLFKGRRGP  322 (448)
T ss_pred             hHHHHHHHhcCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcccccch
Confidence            9999999999999999998776543 356889999999999975444443

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.59  E-value=2.9e-14  Score=136.39  Aligned_cols=181  Identities=14%  Similarity=0.127  Sum_probs=121.3

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+..++...+++.|++|+++|++++|+++.+..+|.++||.+++++.+.+                  +|+..|.+.+++
T Consensus       125 ~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------gw~~~f~~~~i~  186 (434)
T PRK11663        125 QGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY------------------GWRYGMMIAGII  186 (434)
T ss_pred             HHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------------------cHHHHHHHHHHH
Confidence            34456778889999999999999999999999999999999999887532                  377778777766


Q ss_pred             HHHHHHHH-HhccCCCCCCCCccCC-c-ccccCCCccccccCCCCCCcchHHH-HHhhcChHHHHHHHHHHHHHHHHHHH
Q psy11785         83 LMLAAVAM-FMFPKTLTKASPVNGT-T-TVATLPTKKESNQKNPSLKDFPKAV-KRLLKNDILMYRTASSVLHILPIAGL  158 (308)
Q Consensus        83 ~ll~~i~~-~~~p~~~p~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~Ll~n~~f~~~~l~~~~~~~~~~~~  158 (308)
                      .++.++.+ +.++++ |+..+.+.. + +.+..+..+++++.+.   +..+.+ ..++|||.++...+.........+++
T Consensus       187 ~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (434)
T PRK11663        187 AIVVGLFLCWRLRDK-PQAMGLPSVGEWRHDALELAQQQEGAGL---SRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAI  262 (434)
T ss_pred             HHHHHHHHHHHcCCC-HhhcCCCCcccccccccccchhccccCC---ChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence            55544433 334443 322111100 0 0000000000000001   111122 24778999888877777777777888


Q ss_pred             HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .+|+|.|+++++|+++.++++......+ +.++|.+++|++.||+..+
T Consensus       263 ~~~~p~~l~~~~g~s~~~a~~~~~~~~~-~~~~g~~~~g~l~dr~~~~  309 (434)
T PRK11663        263 NDWGNLYMSETLGVDLVTANSAVSMFEL-GGFIGALVAGWGSDKLFNG  309 (434)
T ss_pred             HHHHHHHHHhccCCCHHHHHHHHHHHHH-HHHHHHHHHhhhHHHhccC
Confidence            8999999998999999999887665543 5688999999999998433

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.58  E-value=1.9e-14  Score=133.00  Aligned_cols=185  Identities=13%  Similarity=0.155  Sum_probs=124.4

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHH-HHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGF-ILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~-~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      +.+..++...+++.|++|+++|++++++......+|.++|| ++++.+...+                  .|+..|++.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~~~~~  157 (379)
T TIGR00881        96 FQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY------------------SWHWVFIVPG  157 (379)
T ss_pred             hccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC------------------CchhHHHHHH
Confidence            45677889999999999999999999999999999999999 5666654321                  2556677776


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCccCCccc-ccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785         81 VFLMLAAVAMFMFPKTLTKASPVNGTTTV-ATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY  159 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~  159 (308)
                      ++.++..+..+.+.++.|+.++.+..++. ....+..+++ .++..+......++++++|.++...+...+......++.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (379)
T TIGR00881       158 IIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEK-KEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGIL  236 (379)
T ss_pred             HHHHHHHHHHheeeCCCccccccCccccCccccccccccc-ccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence            66555544444333333322211110000 0000000000 011111223346788999999888888888888888999


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .++|.|+++++|+++.+++++.....+ +.++|.++.|++.||+..+
T Consensus       237 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~r~~~~  282 (379)
T TIGR00881       237 DWSPLYLTQEKGFSKEKASWAFTLYEL-GGLVGTLLAGWLSDKLFNG  282 (379)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHH-HcchhHHHHHHHHHHHcCC
Confidence            999999999999999999887665443 4578899999999986444

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.56  E-value=8.6e-14  Score=133.21  Aligned_cols=184  Identities=14%  Similarity=0.133  Sum_probs=121.7

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+..++...+++.|++|+++|++++|+++++..+|.++++.+.+.....+                 .+|+..|++.++.
T Consensus       132 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----------------~~w~~~f~~~~~~  194 (438)
T TIGR00712       132 QGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF-----------------NDWHAALYFPAIC  194 (438)
T ss_pred             hhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh-----------------hhhHHHHHHHHHH
Confidence            34455667788889999999999999999999999999988777654321                 2477888887777


Q ss_pred             HHHHHHH-HHhccCCCCCCCCccC-CcccccCCCccccccCCCCCCcchHH-HHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785         83 LMLAAVA-MFMFPKTLTKASPVNG-TTTVATLPTKKESNQKNPSLKDFPKA-VKRLLKNDILMYRTASSVLHILPIAGLY  159 (308)
Q Consensus        83 ~ll~~i~-~~~~p~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Ll~n~~f~~~~l~~~~~~~~~~~~~  159 (308)
                      .++..+. +++.|++ |+..+.++ +++..+.++... ++.+.+. +..+. .++++||+.++...+...+.....+++.
T Consensus       195 ~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (438)
T TIGR00712       195 AIIVALFAFAMMRDT-PQSCGLPPIEEYRNDYPDDYN-EKAEQEL-TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVL  271 (438)
T ss_pred             HHHHHHHHHHhccCC-HHhcCCCCchhcccccccccc-ccccccc-chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHH
Confidence            6665544 3444443 33211111 000000000000 0000111 11111 2357899999888888777778888999


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      +++|.|+++++|+++.+++++..+..+ +.++|.+++|++.||++.+.
T Consensus       272 ~~~p~~l~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~  318 (438)
T TIGR00712       272 DWSPTYLKEVKHFALDKSSWAYFLYEY-AGIPGTLLCGWMSDKVFKGN  318 (438)
T ss_pred             HhHHHHHHHccCCChhhHHHHHHHHHH-HHHHHHHHHHHHHHHhccCc
Confidence            999999999999999999887655443 45788999999999986443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.53  E-value=9.2e-14  Score=129.46  Aligned_cols=166  Identities=16%  Similarity=0.245  Sum_probs=122.7

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+...+...+++.|++|+++|++++|+.+....+|.++||.+++++.+.+                  +|+..|.+.++
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------~~~~~~~~~~~  167 (385)
T TIGR00710       106 GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL------------------SWHAIFAFLSL  167 (385)
T ss_pred             chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------------CHHHHHHHHHH
Confidence            455667788899999999999999999999999999999999999887632                  36666776666


Q ss_pred             HHHHHHHHHHh-ccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         82 FLMLAAVAMFM-FPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        82 ~~ll~~i~~~~-~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      ..++..+..+. .|++.++ +++                   ...++..+..++++|||.++...+...+.....+++.+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~-~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (385)
T TIGR00710       168 AGILLSALIFFILPETLPY-EAR-------------------IQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFS  227 (385)
T ss_pred             HHHHHHHHHHHhCCCCCCC-ccc-------------------CCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence            55554444333 3332111 000                   00112234567888999998877777777777888899


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +.|.|+++++|+++.+++++..... .+.+++.+++|++.||+++|
T Consensus       228 ~~~~~~~~~~g~~~~~~g~~~~~~~-~~~~~~~~~~g~l~~~~~~~  272 (385)
T TIGR00710       228 GAPFVYIDIMGVSPSVFGLLFALNI-IAMIFGGFLNGRFIKKWGAK  272 (385)
T ss_pred             cChHHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHH
Confidence            9999999999999999998765543 35678899999999999754

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.52  E-value=1.3e-13  Score=128.48  Aligned_cols=161  Identities=20%  Similarity=0.302  Sum_probs=128.6

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+.+++++.++..|.+|+++|+++++++..+..++.++|..+|.++-+++                  +||..|.+.+.+
T Consensus       115 ~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~------------------GWR~~F~~ia~l  176 (394)
T COG2814         115 HGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF------------------GWRATFLAIAVL  176 (394)
T ss_pred             HHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh------------------hHHHHHHHHHHH
Confidence            35677888999999999999999999999999999999999999998754                  499999988877


Q ss_pred             HHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         83 LMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        83 ~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      .++..+. +..+|   |++.+.+                    .+.-.+...+++|||..+...+...+...+.+...+|
T Consensus       177 ~ll~~~~~~~~lP---~~~~~~~--------------------~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftY  233 (394)
T COG2814         177 ALLALLLLWKLLP---PSEISGS--------------------LPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTY  233 (394)
T ss_pred             HHHHHHHHHHhCC---CccCCCC--------------------CCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHh
Confidence            7665443 44455   1111110                    0011233568999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +-.|+|+..|+|.+..++.+-...+ ++++|++++|++.|| +.+
T Consensus       234 i~P~L~~v~g~s~~~vs~~Ll~~Gv-~~~~Gn~~gGrl~dr-~~~  276 (394)
T COG2814         234 IRPFLESVAGFSVSAVSLVLLAFGI-AGFIGNLLGGRLADR-GPR  276 (394)
T ss_pred             HHHHHHHccCCCHhHHHHHHHHHHH-HHHHHHHHHhhhccc-cch
Confidence            9999999999999999987655543 668999999999999 433

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.51  E-value=2.3e-13  Score=127.67  Aligned_cols=157  Identities=13%  Similarity=0.029  Sum_probs=112.5

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLA   86 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~   86 (308)
                      ++...+.+.|++|+++|+++++++.++..+|.++|+++++++.+.+                  +||..|++.+++.++.
T Consensus        96 ~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~------------------gWr~~f~~~~~l~~~~  157 (368)
T TIGR00903        96 LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG------------------GLQLLIIPIAAVAAAG  157 (368)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------------------chHHHHHHHHHHHHHH
Confidence            4556677789999999999999999999999999999999987632                  3788888877776665


Q ss_pred             HHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy11785         87 AVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKY  165 (308)
Q Consensus        87 ~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~y  165 (308)
                      .+.+ +.+||+ |+.+++    .       .+       .++..+.+++++|||.++...+..++.....+++.+|+|+|
T Consensus       158 ~~~~~~~lp~~-p~~~~~----~-------~~-------~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~  218 (368)
T TIGR00903       158 IILVLAALPAL-PFQAAE----G-------FG-------FKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAA  218 (368)
T ss_pred             HHHHHHHcCCC-CCCCCC----C-------cc-------hHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5543 344443 221110    0       00       00122357889999999999999999999999999999999


Q ss_pred             HHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        166 FETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       166 l~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +++ .|++.. ++.....    ....|.+..+++.||..++
T Consensus       219 L~~-~g~s~~-~~~~~~l----~~~~g~~g~~~~~d~~~r~  253 (368)
T TIGR00903       219 LRP-AGLEDI-AGDAVAL----AILAGLIGVAVIPDRVARA  253 (368)
T ss_pred             HHH-CCCChH-HHHHHHH----HHHHHHHHHHHhhHHhhhh
Confidence            975 678764 4443322    2234555568999997654

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.51  E-value=2.1e-13  Score=130.29  Aligned_cols=173  Identities=16%  Similarity=0.185  Sum_probs=117.2

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      +|.++.+|.+.+++.|++|+++|+++.++...+...|++++++++..+.....+.        .-+.|  +||..|++.+
T Consensus       136 ~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--------~~~~~--gWr~~F~i~~  205 (432)
T PRK10406        136 LSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA--------ELREW--GWRIPFALGA  205 (432)
T ss_pred             hhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--------HHhcc--chHHHHHHHH
Confidence            3677889999999999999999999999999888899999988876655432110        00122  5888998876


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHH-HHHHHHHHH
Q psy11785         81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVL-HILPIAGLY  159 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~-~~~~~~~~~  159 (308)
                      ++.++..    .+.+..|+.++.++  +        + +  ++ .    ..+++++||+.++...+...+ .....+++.
T Consensus       206 ~~~ll~~----~~~~~~~e~~~~~~--~--------~-~--~~-~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  263 (432)
T PRK10406        206 VLAVVAL----WLRRQLDETSQQET--R--------A-L--KE-A----GSLKGLWRNRRAFIMVLGFTAAGSLCFYTFT  263 (432)
T ss_pred             HHHHHHH----HHHhcCCCCchHHH--h--------h-h--cc-c----ccHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            6554432    22233333221110  0        0 0  00 0    124667888888766655444 366788899


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +|+|.|+++++|++..++++......+ ..+++..+.|++.||+++|
T Consensus       264 ~~lp~~l~~~~g~s~~~~~~~~~i~~~-~~~i~~~~~G~l~Dr~grr  309 (432)
T PRK10406        264 TYMQKYLVNTAGMHANVASGIMTAALF-VFMLIQPLIGALSDKIGRR  309 (432)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCch
Confidence            999999999999999888876554433 3356667889999999866

>TIGR00901 2A0125 AmpG-related permease

Probab=99.50  E-value=1.7e-13  Score=127.07  Aligned_cols=172  Identities=10%  Similarity=0.063  Sum_probs=120.0

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLA   86 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~   86 (308)
                      .+...+++.|++|+|+|+++.|+..++..+|.++|+.+++.+.+.+.+        ....+|  +|+..|++.++..++.
T Consensus       101 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~--------~~~~~~--~wr~~f~i~ai~~l~~  170 (356)
T TIGR00901       101 DIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFA--------NTGLIT--LWGYIFFWTALLILPG  170 (356)
T ss_pred             HHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccc--------cccccc--ccHHHHHHHHHHHHHH
Confidence            345577899999999999999999999999999999999988765421        011244  4888898887766554


Q ss_pred             HHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChH---HHHHHHHHHHHHHHHHHHHhHHH
Q psy11785         87 AVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDI---LMYRTASSVLHILPIAGLYTFLP  163 (308)
Q Consensus        87 ~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~---f~~~~l~~~~~~~~~~~~~~~~P  163 (308)
                      .+..++..++ ++++++. + +        +      ..++....++++++||.   ++...+..++.....+...+++|
T Consensus       171 ~~~~~~~~~e-~~~~~~~-~-~--------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (356)
T TIGR00901       171 LLVTLFLAKE-PQEDASV-P-K--------P------LTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTT  233 (356)
T ss_pred             HHHHHHhccC-CCccccc-c-h--------h------HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4433332222 1111000 0 0        0      00122345677788875   66666666666777888899999


Q ss_pred             HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|+++ +|+++.+.+.+.+.....+.++|.+++|++.||++++
T Consensus       234 ~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~  275 (356)
T TIGR00901       234 LFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL  275 (356)
T ss_pred             HHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence            99988 8999999988776555456678999999999999855

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.50  E-value=1.5e-13  Score=130.70  Aligned_cols=192  Identities=8%  Similarity=0.073  Sum_probs=123.9

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |++..+|...+++.|++|+++|++++|++.....+|.++|+++++++...- +     ..+.      .+||..|++.++
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~-----~~~~------~gwr~~f~~~~~  176 (412)
T TIGR02332       109 AEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD-G-----LMAL------KGWQWLFLLEGF  176 (412)
T ss_pred             HHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C-----CCCc------cchhHHHHHHHH
Confidence            566677888899999999999999999999999999999999999886420 0     0000      137777888777


Q ss_pred             HHHHHHHHHHhccCCCCCCCCcc-C-Ccc-c-ccCCCc----c-ccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVN-G-TTT-V-ATLPTK----K-ESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHI  152 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~-~-~~~-~-~~~~~~----~-~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~  152 (308)
                      ..++..+.++++.++.|++++.. + +++ . +..+..    + .++..++........+++++ +|.++...+...+..
T Consensus       177 ~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  255 (412)
T TIGR02332       177 PSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLT  255 (412)
T ss_pred             HHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHH
Confidence            76665555444434444432110 0 000 0 000000    0 00000000000112344444 688888888888888


Q ss_pred             HHHHHHHhHHHHHHHHH-hCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        153 LPIAGLYTFLPKYFETQ-FRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       153 ~~~~~~~~~~P~yl~~~-~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      ...+++.+|+|.|+++. ++++..+++++..... .+.++|.+++|++.||++.|.
T Consensus       256 ~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~-l~~~~g~l~~g~l~dr~~~r~  310 (412)
T TIGR02332       256 NTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQ-FCTIFGMIWWSRHSDRLKERK  310 (412)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHH-HHHHHHHHHHHHHhcccCccH
Confidence            88999999999999883 4778888887665443 356889999999999998653

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK03545 putative arabinose transporter; Provisional

Probab=99.49  E-value=3.4e-13  Score=126.89  Aligned_cols=160  Identities=11%  Similarity=0.132  Sum_probs=116.4

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+..++...+++.|++|+++|++++|++.++..+|.++||.+++.+.+.+                  +||..|.+.+++
T Consensus       111 ~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~------------------gw~~~f~~~~~~  172 (390)
T PRK03545        111 HAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL------------------GWRTTFLAIGGG  172 (390)
T ss_pred             HHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh------------------cHHHHHHHHHHH
Confidence            34566788899999999999999999999999999999999999887643                  377777777766


Q ss_pred             HHHHHHHHHh-ccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         83 LMLAAVAMFM-FPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        83 ~ll~~i~~~~-~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      .++..+..+. .|+. ++   ++ +                .    ..+..++++|||.++...+...+.....++..++
T Consensus       173 ~~l~~~~~~~~~~~~-~~---~~-~----------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (390)
T PRK03545        173 ALITLLLLIKLLPLL-PS---EH-S----------------G----SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSY  227 (390)
T ss_pred             HHHHHHHHHHhCCCC-CC---CC-c----------------c----hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555443332 2321 11   00 0                0    0123567889998876655555555566666788


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +|.|+++++|+|+.+++++.....+ +.++|.++.|++.||++++
T Consensus       228 ~~~~l~~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~  271 (390)
T PRK03545        228 IEPFVQQVAGLSENFATLLLLLFGG-AGIIGSVLFSRLGNRHPSG  271 (390)
T ss_pred             HHHHHHHhcCCCccHHHHHHHHHHH-HHHHHHHHHHHHhhccchh
Confidence            8999999999999999887655443 4678899999999998743

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.48  E-value=3e-13  Score=126.10  Aligned_cols=167  Identities=15%  Similarity=0.176  Sum_probs=121.1

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+...+...+++.|++|+++|++.+++.+....+|..+||++++.+.+.+                  +|+..|.+.++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~  154 (377)
T PRK11102         93 AAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF------------------SWHAIFWVLALA  154 (377)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------------ChHHHHHHHHHH
Confidence            34455677889999999999999999999999999999999999887632                  266667766665


Q ss_pred             HHHHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         83 LMLAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        83 ~ll~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      .++..+.. +..|++.++++++                  +.+.++..+..+++++||.++...+...+.....+.+..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (377)
T PRK11102        155 AILAAALVFFFIPETLPKERRQ------------------PFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTA  216 (377)
T ss_pred             HHHHHHHHHHhCCccCcccccC------------------CCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHc
Confidence            55544433 3344432211000                  0011123345678899998887777777777777888889


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|.++++++|+++.+++++..... .+.+++.+++|++.||+++|
T Consensus       217 ~~~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~~r~g~~  260 (377)
T PRK11102        217 GPFVYIELNGVSPQNFGYYFALNI-VFLFVMTIINSRFVRRVGAL  260 (377)
T ss_pred             CHHHHHHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCHH
Confidence            999999999999999998776543 35678889999999999854

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.47  E-value=3.8e-13  Score=130.88  Aligned_cols=184  Identities=11%  Similarity=0.159  Sum_probs=120.1

Q ss_pred             ccccccccchhhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      |++..+|...+.+.+.+ |+++|++++|++.+...+|+++||.+||++.+.+                  .||..|.+..
T Consensus       107 g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~------------------gwr~~f~i~~  168 (495)
T PRK14995        107 GAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF------------------YWGSVFLINV  168 (495)
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC------------------ChHHHHHHHH
Confidence            44556666677775554 7899999999999999999999999999998743                  2555566655


Q ss_pred             HHHHHHHH-HHHhccCCCCCCCCccCCc-ccc-----------cCCC-cccc-cc-------------------CCCCCC
Q psy11785         81 VFLMLAAV-AMFMFPKTLTKASPVNGTT-TVA-----------TLPT-KKES-NQ-------------------KNPSLK  126 (308)
Q Consensus        81 ~~~ll~~i-~~~~~p~~~p~~~~~~~~~-~~~-----------~~~~-~~~~-~~-------------------~~~~~~  126 (308)
                      .+.++..+ .++..|++. +++.++.+. ...           .... .+.. ..                   .+.+. 
T Consensus       169 ~~~~~~~~l~~~~l~~~~-~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~-  246 (495)
T PRK14995        169 PIVLVVMGLTARYVPRQA-GRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAA-  246 (495)
T ss_pred             HHHHHHHHHHHHhCCCCC-CCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            44444333 234445432 211111100 000           0000 0000 00                   00000 


Q ss_pred             cchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        127 DFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       127 ~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +.|....+++|||.+....+..++....++++..++|.|+|..+|+|+.++|+.+....+ +..++.+++|++.||++.|
T Consensus       247 ~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~-~~~~~~~~~g~l~~r~g~~  325 (495)
T PRK14995        247 SRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMV-ASGFSGPIAGILVSRLGLR  325 (495)
T ss_pred             CCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCch
Confidence            011112578999999888888888888888999999999999999999999998765543 4677889999999999864

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.47  E-value=6.1e-13  Score=123.29  Aligned_cols=166  Identities=17%  Similarity=0.189  Sum_probs=127.7

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL   83 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~   83 (308)
                      ++.+..+++++..++|||++|.++|+.. +..+|.++.-+++-.+.....+               +.|+..-.+..+..
T Consensus       119 GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~---------------~~w~~~~~i~~~~l  182 (417)
T COG2223         119 GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGF---------------LAWRNVAGIYVVAL  182 (417)
T ss_pred             cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhh---------------HHHHHHHHHHHHHH
Confidence            4567899999999999999999999999 8888888888888777654311               13766666666666


Q ss_pred             HHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785         84 MLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP  163 (308)
Q Consensus        84 ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P  163 (308)
                      ++.++..+++-++.|+.+...+                  +.+  +..++.+++|+..|..++.+...+..+.++..++|
T Consensus       183 ~v~~v~~~~~~~d~p~~r~~~~------------------~~~--~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~  242 (417)
T COG2223         183 AIAAVLAWLGMNDVPEHRASVK------------------PQL--PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLP  242 (417)
T ss_pred             HHHHHHHHHHhCCChhhhcccc------------------ccc--hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666666666676665421110                  011  14567889999999999999999999999999999


Q ss_pred             HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|+++|||+++.++|.+.....+++. +.-.+||++.||++.+
T Consensus       243 ~~~~~~fg~~~~~Ag~~a~~f~~~g~-l~Rp~GG~LsDR~Gg~  284 (417)
T COG2223         243 MYLVTQFGLSPVTAGLIAFLFPLIGA-LARPLGGWLSDRIGGR  284 (417)
T ss_pred             HHHHHhcCCChhhHHHHHHHHHHHHH-HHHhccchhhhhccch
Confidence            99999999999999987765555543 4467899999999865

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.47  E-value=3.6e-13  Score=127.30  Aligned_cols=171  Identities=15%  Similarity=0.122  Sum_probs=116.7

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |++..+|...+++.|++|+++|++++|++.....+|.++||.+||++.+.                   .|+..+.+.+.
T Consensus       101 ~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-------------------~~~~~~~i~~~  161 (393)
T PRK11195        101 GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-------------------HAEAALAVCAL  161 (393)
T ss_pred             HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHH
Confidence            56778899999999999999999999999999999999999999998762                   15566665554


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      ..++..+..+.+|+..++.++ ++  +        +   .....+++.+..+.+++||.+....+...+...........
T Consensus       162 ~~~~~~~~~~~l~~~~~~~~~-~~--~--------~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (393)
T PRK11195        162 IYLLAALFNLFIPRLGARRPG-QS--W--------N---PIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFL  227 (393)
T ss_pred             HHHHHHHHHhcCCCCcccccc-cC--C--------C---HHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHH
Confidence            443333344455543211100 00  0        0   00001233344577889998765555544455556666777


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +|.|+++.+|+++.++|++.....+ ++++|.++.+++.||.+.+
T Consensus       228 ~~~~~~~~lg~s~~~~G~~~~~~~~-g~i~g~~~~~~l~~~~~~~  271 (393)
T PRK11195        228 VLAWAPVALGITLNQPAYLQAVVAI-GIAVGAGAAARLVTLETVL  271 (393)
T ss_pred             HHHHHHHHcCCChhHHHHHHHHHHH-HHHHHHHHHHHHhcCCccc
Confidence            8889999999999999987765433 5677777888887776543

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.46  E-value=4e-13  Score=123.67  Aligned_cols=171  Identities=19%  Similarity=0.109  Sum_probs=118.8

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+...+...+++.|++|+++|++++|+......+|.++||.+++++.+.+                  .|+..|.+.++.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------------g~~~~~~~~~~~  167 (365)
T TIGR00900       106 QAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL------------------GIKWAIWVDAVG  167 (365)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHHH
Confidence            44556778899999999999999999999999999999999999987642                  366677766655


Q ss_pred             HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH-hH
Q psy11785         83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY-TF  161 (308)
Q Consensus        83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~-~~  161 (308)
                      .++..+.++.++.+  +.++++.+ +        .+   ++..++..+..+.++|||.++...+..........+.. .+
T Consensus       168 ~~~~~~~~~~~~~~--~~~~~~~~-~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (365)
T TIGR00900       168 FAISALLIVSVRIP--ELAASEIQ-A--------LS---NAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVAL  233 (365)
T ss_pred             HHHHHHHHHhcccc--cCCCcccc-c--------cc---hhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44443333333221  11110000 0        00   00011233456778899988877777776666666666 89


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|.|+++.+|+++.+.+++.....+ +.+++.++.+++.||++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~  277 (365)
T TIGR00900       234 FPYVQSKYLGRGSTHYGWVLAAFGL-GALLGALLLGLLGRYFKRM  277 (365)
T ss_pred             hHHHHHHHhCCchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhchh
Confidence            9999998899999999887655443 4577888889999998754

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.46  E-value=1.1e-12  Score=126.13  Aligned_cols=182  Identities=13%  Similarity=0.091  Sum_probs=115.2

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHH-HHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGP-SLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp-~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      .+..+|...+.+.|++|+++|++++|+++.+..+|. .++|+++..+...                  .+|+..|++.++
T Consensus       134 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~------------------~gw~~~f~i~~~  195 (452)
T PRK11273        134 QGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF------------------NDWHAALYMPAF  195 (452)
T ss_pred             HhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh------------------ccHHHHHHHHHH
Confidence            344556667788899999999999999999988886 4566655433211                  137777887776


Q ss_pred             HHHHHHHH-HHhccCCCCCCCCccCCcc-cccCCCccccccCCCCCCcchHH-HHHhhcChHHHHHHHHHHHHHHHHHHH
Q psy11785         82 FLMLAAVA-MFMFPKTLTKASPVNGTTT-VATLPTKKESNQKNPSLKDFPKA-VKRLLKNDILMYRTASSVLHILPIAGL  158 (308)
Q Consensus        82 ~~ll~~i~-~~~~p~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~Ll~n~~f~~~~l~~~~~~~~~~~~  158 (308)
                      +.++..++ +++.|++ |++...++.++ .+..++..+++ .+. .++.... .+.++|||.++...+...+.....+++
T Consensus       196 ~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  272 (452)
T PRK11273        196 AAILVALFAFAMMRDT-PQSCGLPPIEEYKNDYPDDYNEK-HEQ-ELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGI  272 (452)
T ss_pred             HHHHHHHHHHHHccCC-HhhcCCCChhhhhhccccccccc-cCC-CccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence            65555444 3444443 33211111000 00000000000 000 0111111 235789999998888888888888899


Q ss_pred             HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .+|+|.|+++++|++..+++++..... .+.++|.+++|++.||++.+
T Consensus       273 ~~~~P~~l~~~~g~s~~~~~~~~~~~~-~~~~~g~~~~G~l~dr~~~~  319 (452)
T PRK11273        273 LDWSPTYLKEVKHFALDKSSWAYFLYE-YAGIPGTLLCGWMSDKVFRG  319 (452)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHccC
Confidence            999999999999999998887665433 34567899999999998543

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.46  E-value=6.3e-13  Score=125.68  Aligned_cols=167  Identities=11%  Similarity=0.030  Sum_probs=115.7

Q ss_pred             cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785          5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM   84 (308)
Q Consensus         5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l   84 (308)
                      ...+...+++.|++|+|+|+++.++..++..+|.++|+.+++++.+.+                 .+|+..|++.++..+
T Consensus       110 ~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~-----------------~gw~~~f~i~a~~~l  172 (402)
T PRK11902        110 SQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV-----------------LGWGNTYLLMAGLML  172 (402)
T ss_pred             HHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc-----------------cCHHHHHHHHHHHHH
Confidence            344566788999999999999999999999999999999988876532                 148888888877665


Q ss_pred             HHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy11785         85 LAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPK  164 (308)
Q Consensus        85 l~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~  164 (308)
                      +..+..+..||..++  +++ + +              +..++..+.+++++|||.++...+...+..........+.+.
T Consensus       173 ~~~l~~~~~~e~~~~--~~~-~-~--------------~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~  234 (402)
T PRK11902        173 AGALTTLWAPEPEVP--ARP-P-R--------------SLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTT  234 (402)
T ss_pred             HHHHHHHhcCCCccc--ccc-c-c--------------hhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            554444444432111  000 0 0              000123456778999998877666555544443333445666


Q ss_pred             HHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        165 YFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       165 yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      |+++++|+++.+.+++.+...+.+.++|.+++|++.||++++
T Consensus       235 ~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~  276 (402)
T PRK11902        235 FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY  276 (402)
T ss_pred             HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            788889999999998875544445688999999999999754

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.46  E-value=3.2e-13  Score=130.09  Aligned_cols=186  Identities=19%  Similarity=0.204  Sum_probs=121.7

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+...+...+++.|++|+++|+++++++.....+|+++||.+++++.+.+            +      |+..|.+.+.
T Consensus       103 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------~------w~~~f~~~~~  164 (485)
T TIGR00711       103 GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY------------H------WRWIFLINVP  164 (485)
T ss_pred             hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc------------C------ceehhhhhhH
Confidence            556677889999999999999999999999999999999999999987643            2      4344544444


Q ss_pred             HHHHHHH-HHHhccCCCCCCCCccCCccc-----------ccCCCccccccCCC---------------------CCCcc
Q psy11785         82 FLMLAAV-AMFMFPKTLTKASPVNGTTTV-----------ATLPTKKESNQKNP---------------------SLKDF  128 (308)
Q Consensus        82 ~~ll~~i-~~~~~p~~~p~~~~~~~~~~~-----------~~~~~~~~~~~~~~---------------------~~~~~  128 (308)
                      +.++..+ .++.+|++.++.+++......           ....+..++.....                     ..++.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (485)
T TIGR00711       165 IGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDN  244 (485)
T ss_pred             HHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            3333332 233445432221111000000           00000000000000                     00000


Q ss_pred             hHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        129 PKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       129 ~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +....+++|||.++...+..++.....++...++|.|+++.+|+++.+++++..... .+.+++.++.|++.||+++|
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~  321 (485)
T TIGR00711       245 PLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVG-LAPMLSSPIAGRMGDKIDPR  321 (485)
T ss_pred             CccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcCcH
Confidence            111246889999988888888888888999999999999999999999998775543 34678899999999999864

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.46  E-value=1.1e-12  Score=121.65  Aligned_cols=183  Identities=14%  Similarity=0.167  Sum_probs=114.2

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHH-HHHHHHHH
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGL-VLVAVFLM   84 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~f-ii~g~~~l   84 (308)
                      .++...+++.|++|+++|++++++......+|.++|+.+++.+...+.+-.  .+....+      |+..| ++.++..+
T Consensus       107 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~--~~~~~~~------w~~~~~~~~~~~~~  178 (366)
T TIGR00886       107 SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGA--GLPAHLA------WGWAFVIVPAGILL  178 (366)
T ss_pred             hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcc--ccccccc------ccchhHHHHHHHHH
Confidence            345678899999999999999999998888888888888877765432210  0001112      33334 33233333


Q ss_pred             HHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785         85 LAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP  163 (308)
Q Consensus        85 l~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P  163 (308)
                      +..+. +...+++ |++++++.+.+     .+.+....   .++..+..++++++|.++...+.........+++.+++|
T Consensus       179 ~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (366)
T TIGR00886       179 LPALLIFFVGADT-PPGKPATGKLS-----FKGARWSV---GTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFA  249 (366)
T ss_pred             HHHHHHHHhcccC-Ccccccchhcc-----cccccccc---cchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            33333 3333443 22211110000     00000000   011122457788999888887777777777888999999


Q ss_pred             HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|+++.+|+++.+++++.....+ ..+++.+++|++.||++.|
T Consensus       250 ~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~r~g~~  291 (366)
T TIGR00886       250 MFFKDQFGLSKVTAGAYASLGGL-LGSLARPLGGAISDRLGGA  291 (366)
T ss_pred             HHHHHHcCCcHHHHHHHHHHHHH-HHHHHhhccchHHHhhccc
Confidence            99999999999999976654433 4577889999999999865

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.45  E-value=8.2e-13  Score=128.49  Aligned_cols=168  Identities=13%  Similarity=0.095  Sum_probs=117.5

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL   83 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~   83 (308)
                      +...+...+++.|++|+++|+++.++...+..+|.++|+.+++++.+.+                 .+|+..|.+.+++.
T Consensus       122 a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~-----------------~GWr~~f~i~a~l~  184 (491)
T PRK11010        122 ASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRY-----------------LGWQGMYWLMAALL  184 (491)
T ss_pred             HHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------cCHHHHHHHHHHHH
Confidence            3444566788999999999999999999999999999999999887621                 14888898888776


Q ss_pred             HHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785         84 MLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP  163 (308)
Q Consensus        84 ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P  163 (308)
                      ++..+..+..||.. + ++++ + +          + .+   +.....++++++++.++...+...+.....+...++.|
T Consensus       185 ll~~l~~~~~~e~~-~-~~~~-~-~----------~-~~---~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~  246 (491)
T PRK11010        185 IPCIIATLLAPEPT-D-TIPV-P-K----------T-LE---QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTT  246 (491)
T ss_pred             HHHHHHHHhcCCCc-c-cccc-c-c----------c-hh---hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66554444444421 1 1000 0 0          0 00   01223456777777665555444555555666677889


Q ss_pred             HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|+++++|+++.+.+++.+.....+.++|.+++|+++||++++
T Consensus       247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~  289 (491)
T PRK11010        247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF  289 (491)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            9998889999999998765454557789999999999999854

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.45  E-value=9.8e-13  Score=124.32  Aligned_cols=166  Identities=19%  Similarity=0.192  Sum_probs=117.7

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+...+...+++.|.+|+++|.+.+++......+|..+||.+++++.+.+                  +|+..|++.++.
T Consensus       115 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------------------~w~~~~~~~~~~  176 (406)
T PRK15402        115 LCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL------------------PWRGMFVLFAAL  176 (406)
T ss_pred             hhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------------------CccHHHHHHHHH
Confidence            34456778899999999999999999998888899999999999887632                  255556666655


Q ss_pred             HHHHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         83 LMLAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        83 ~ll~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      .++..+.. +..|++.+    .+.+               +.+.++..+..+++++||.++...+...+.......+.++
T Consensus       177 ~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (406)
T PRK15402        177 AALSFFGLWRAMPETAG----RVGE---------------KLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIAL  237 (406)
T ss_pred             HHHHHHHHHHhCCCCCc----cccc---------------cccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            54444333 23333211    0000               0011234456678999999988877777776667778888


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|.|+++++|+++.+.++...... .+.++|.++.|++.||++.+
T Consensus       238 ~p~~~~~~~g~~~~~~g~~~~~~~-~~~~~g~~~~g~l~~r~~~~  281 (406)
T PRK15402        238 SPVILISGEQLSSYEYGLLQVPVF-GALIAGNLTLARLTSRRPLR  281 (406)
T ss_pred             hHHHHHHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCHH
Confidence            999999999999998887654333 35678889999999998754

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.44  E-value=1.5e-12  Score=126.22  Aligned_cols=176  Identities=12%  Similarity=0.108  Sum_probs=119.1

Q ss_pred             cchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy11785          9 LGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAV   88 (308)
Q Consensus         9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i   88 (308)
                      ....++.|++|+++|++++|+......+|.++|+++.+.+.....+..      . + .. .+||..|++.+++.++..+
T Consensus       143 ~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~------~-~-~~-~gWr~~f~i~g~l~l~~~l  213 (476)
T PLN00028        143 SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG------A-P-SF-TAWRIAFFVPGLLHIIMGI  213 (476)
T ss_pred             HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------C-c-ch-hhhHHHHHHHHHHHHHHHH
Confidence            345678999999999999999988777788888777765543221100      0 0 01 1488888888888777776


Q ss_pred             HHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11785         89 AMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFET  168 (308)
Q Consensus        89 ~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~  168 (308)
                      .+++++++.|+...++..       + +. +..   .++..+.+++.++++.++...+...+.....+++.+++|.|+++
T Consensus       214 ~~~~~~~~~p~~~~~~~~-------~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~  281 (476)
T PLN00028        214 LVLTLGQDLPDGNYRELK-------K-SG-TMP---KDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYD  281 (476)
T ss_pred             HHHHHcCcCCCCchhhHH-------h-cC-ccc---cccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            666677665543211000       0 00 000   01223456778889988777766666666667788899999999


Q ss_pred             HhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        169 QFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       169 ~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ++|++..+++.+.....+ +.++|.+++|++.||+++|
T Consensus       282 ~~g~s~~~a~~~~~~~~~-~~~ig~~~~G~lsDr~~~r  318 (476)
T PLN00028        282 RFGLSLETAGAIAASFGL-MNLFARPAGGYLSDVAARR  318 (476)
T ss_pred             hcCCCHHHHHHHHHHHHH-HHHHHHhhhHHHHHHHHHh
Confidence            999999999887655443 4678999999999998754

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.43  E-value=1.5e-13  Score=126.00  Aligned_cols=174  Identities=23%  Similarity=0.359  Sum_probs=117.4

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+...+...+++.|++|+++|++++++...+..+|.++||.+++++.+.+                  .|+..|++.++
T Consensus        98 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------------~~~~~~~~~~~  159 (352)
T PF07690_consen   98 GSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF------------------GWRWAFLISAI  159 (352)
T ss_dssp             HHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC------------------HHCCHHHHHHH
T ss_pred             ccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc------------------ccccccccccc
Confidence            345677888999999999999999999999999999999999999987543                  37677888777


Q ss_pred             HHHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         82 FLMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        82 ~~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      +.++..+. .++++++.+++++.+.+ +       ++ ++.+.   +..+.++.++++|.++...+...........+..
T Consensus       160 ~~~~~~il~~~~~~~~~~~~~~~~~~-~-------~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (352)
T PF07690_consen  160 LSLIAAILFILFLPEPPPPRERESPK-E-------SE-SKKPK---PLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSF  227 (352)
T ss_dssp             HHHHHHHHHHCCC---STTTT--SST-T-------TT---HHH---CCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhHhhhhhhccccccccccc-c-------cc-ccccc---ccccccccccccchhhhhhhhhhHHHHHHHHhhc
Confidence            76666553 23444443322221110 0       00 00000   1111245666777665455555555667788999


Q ss_pred             HHHHHHHHHhCCC-cccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        161 FLPKYFETQFRLP-SHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       161 ~~P~yl~~~~gls-~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ++|.|+++.+|++ ..+++.+.+...+ ..+++.++.|++.||++.+
T Consensus       228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~  273 (352)
T PF07690_consen  228 FLPLYLQEVLGFSGPSQAGLLFSIFGI-VGIIGSLLAGRLSDRFGRR  273 (352)
T ss_dssp             HHHHHCCHHHHCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTTCH
T ss_pred             ccchhhhhccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCcH
Confidence            9999999999999 7888866655443 3456688999999998764

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>KOG2533|consensus

Probab=99.43  E-value=3e-13  Score=130.65  Aligned_cols=186  Identities=16%  Similarity=0.148  Sum_probs=136.5

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      -++..+|.-..++..|+.++||++.+|++++...+|.++|.++...+.++....      .      ..+|+..|++-|+
T Consensus       147 ~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~------~------~~gW~~~FiI~G~  214 (495)
T KOG2533|consen  147 FESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG------G------LAGWRWLFIIEGV  214 (495)
T ss_pred             HhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC------C------cCCceeehhHHHH
Confidence            367889999999999999999999999999999999999999998876532110      0      1247778999999


Q ss_pred             HHHHHHHHH-HhccCCCCCCCCccCCcccc----cCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHH
Q psy11785         82 FLMLAAVAM-FMFPKTLTKASPVNGTTTVA----TLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIA  156 (308)
Q Consensus        82 ~~ll~~i~~-~~~p~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~  156 (308)
                      +.++.++.. +++|.. |++.+...++|..    ..++.+. ...+++  .-+..+++.++.|..+..++..++.....+
T Consensus       215 i~~~~gi~~f~~lp~~-P~~~~fl~~~ek~~~~~~~~~~~~-~~~~~~--~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~  290 (495)
T KOG2533|consen  215 ITLVLGIVVFFFLPDN-PSKAWFLTDEEKELVVERLRESPS-GGIENK--FKWKGFKEALKDPGVWPFSLCYFFLKLVNY  290 (495)
T ss_pred             HHHHHHheEEEEecCC-hhhccccchHHHHHHHHHHHhccC-CCcccc--cCHHHHHHHHhchhHHHHHHHHHHHhhccc
Confidence            998888764 455554 4433222211110    0000000 000111  124567899999999999999999999999


Q ss_pred             HHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785        157 GLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK  204 (308)
Q Consensus       157 ~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~  204 (308)
                      ++.+|+|.|+.+..|+|..+++.+....-+ +.++|.++.|+++||++
T Consensus       291 ~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~-~g~v~~i~ag~lsdr~~  337 (495)
T KOG2533|consen  291 GFSYWLPLYLKSNGGYSELQANLLSTPYDV-GGIVGLILAGYLSDRLK  337 (495)
T ss_pred             cHHHHHHHHHHcCCCcChHHhccccchHHh-hhHHHHHHHHHHHHHHh
Confidence            999999999998677999999887655443 56889999999999976

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.43  E-value=1.3e-12  Score=124.30  Aligned_cols=161  Identities=14%  Similarity=0.225  Sum_probs=114.9

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL   83 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~   83 (308)
                      +...+...+++.|.+++++++++++++.....+|+++||++|+++.+.+                  +|+..|++.++..
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~------------------gw~~~f~~~~~~~  180 (413)
T PRK15403        119 CFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV------------------HWKVLFAIIAVMG  180 (413)
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------CHHHHHHHHHHHH
Confidence            3344566788999999999999999999999999999999999887532                  3777788777765


Q ss_pred             HHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785         84 MLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL  162 (308)
Q Consensus        84 ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~  162 (308)
                      ++..+. ++.+||+.++++  +   +              ...++..+.+++++|||.++...+...+....++++.++.
T Consensus       181 ~i~~~~~~~~lp~~~~~~~--~---~--------------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~  241 (413)
T PRK15403        181 LIAFVGLLLAMPETVKRGA--V---P--------------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVS  241 (413)
T ss_pred             HHHHHHHHHhCCCCccccC--C---C--------------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            555443 334555422100  0   0              0011234567899999999988888888888888999999


Q ss_pred             HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhh
Q psy11785        163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILK  202 (308)
Q Consensus       163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r  202 (308)
                      |.|+++++|+++.++++...... .+.+++..+.+++.+|
T Consensus       242 P~~l~~~~g~s~~~~gl~~~~~~-~~~~i~~~l~~~~~~~  280 (413)
T PRK15403        242 PVILIDAGGMTTSQFAWTQVPVF-GAVIVANAIVARFVKD  280 (413)
T ss_pred             hHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHhcc
Confidence            99999999999999988754332 2345555555554433

>TIGR00897 2A0118 polyol permease family

Probab=99.42  E-value=3.7e-12  Score=120.56  Aligned_cols=168  Identities=13%  Similarity=0.127  Sum_probs=112.0

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHH-HHHHHHHHhhhcccccCCCCCCCCCCCCchhHH-HHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGP-SLGFILGSFCTRLYVDLSIPSDITPSDPRWIGA-WWLGLVLV   79 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp-~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~ga-Ww~~fii~   79 (308)
                      |.+...+...+++.|++|+++|++++|+..++..+|. ++||++++++.+.+              .|... |+..+...
T Consensus       118 g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~--------------g~~~~~~~~~~~~~  183 (402)
T TIGR00897       118 GYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF--------------GEMNTLWSALAFVL  183 (402)
T ss_pred             chHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------------chHHHHHHHHHHHH
Confidence            3344455566778899999999999999999999997 68999999876532              12222 33322211


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785         80 AVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY  159 (308)
Q Consensus        80 g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~  159 (308)
                           +..+..+++.++.+++++++ +            +   .+.++..+.+++++|||.++...+...+.....+++.
T Consensus       184 -----~~~~~~~~~~~~~~~~~~~~-~------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (402)
T TIGR00897       184 -----TGGVIALFSNKDIFTPQHMQ-T------------R---EKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFA  242 (402)
T ss_pred             -----HHHHHHHhccCCCCCccccc-C------------C---cchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence                 11122222222221111000 0            0   0112334456789999999888888888888889999


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +++|.|+++ +|+++.+++.+.+... .+.++|.++.|++.||+++|
T Consensus       243 ~~~p~~~~~-~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~  287 (402)
T TIGR00897       243 VFLPMFVAE-LGFSTSEWLQIWGTFF-FTNIVFNVIFGIVGDKLGWM  287 (402)
T ss_pred             HHHHHHHHH-cCCChhHHHHHHHHHH-HHHHHHHHHHHHHHHhhcch
Confidence            999999865 8999999887665543 35688999999999999855

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.41  E-value=4e-12  Score=120.04  Aligned_cols=162  Identities=13%  Similarity=0.115  Sum_probs=109.3

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      +|.+..++...+++.|++| ++|++++|++.++..+|+.+|+.+++++.+.+.             .    |+..+.+.+
T Consensus       109 ig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~-------------~----w~~~~~~~~  170 (393)
T PRK09705        109 VGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSE-------------T----WYQTLAWWA  170 (393)
T ss_pred             hHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------C----HHHHHHHHH
Confidence            3566677888899999986 789999999999999999999999998876431             2    433333333


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      +..++..+.++...++.|+++++               +  +.   +    .++.++++.++...+...+.....+++.+
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~---------------~--~~---~----~~~~l~~~~~~~l~~~~~~~~~~~~~~~~  226 (393)
T PRK09705        171 LPAVVALFAWWWQSAREVASSHK---------------T--TT---T----PVRVVFTPRAWTLGVYFGLINGGYASLIA  226 (393)
T ss_pred             HHHHHHHHHHHHHhcCCCccccC---------------C--Cc---C----CcccccCHhHHHHHHHHHHHHHHHHHHHH
Confidence            33322222222222222211000               0  00   0    12345667666666666666777888999


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      |+|.|+++ +|+++.+++.+.....+ +.++|.++.|++.||++++
T Consensus       227 ~lp~~l~~-~g~s~~~ag~~~~~~~i-~~i~g~~~~g~l~~r~~~~  270 (393)
T PRK09705        227 WLPAFYIE-IGASAQYSGSLLALMTL-GQAAGALLMPAMARHQDRR  270 (393)
T ss_pred             HHHHHHHH-cCCChhhhhHHHHHHHH-HHHHHHHHHHHHHhhccch
Confidence            99999986 79999999987765544 6688999999999998765

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.41  E-value=1.7e-12  Score=138.00  Aligned_cols=170  Identities=14%  Similarity=0.077  Sum_probs=124.6

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      +++...|...+++.|+++++++++++|++.++..+|.++||++||+++..+                  .|+..|++.++
T Consensus       121 ~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~------------------~~~~~~~~~~~  182 (1140)
T PRK06814        121 HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG------------------NFVILVALLMG  182 (1140)
T ss_pred             HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc------------------ccHHHHHHHHH
Confidence            567788999999999999999999999999999999999999999998642                  35655644433


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      ..++..+..+.+|+..++....+.               .....++....++.+.+||.++...+..++..+..+++.++
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (1140)
T PRK06814        183 IAVLGWLASLFIPKTGNAAPDLKI---------------DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQ  247 (1140)
T ss_pred             HHHHHHHHHhhCCCCCCCCCCCee---------------ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence            333333334444443221111000               00001223345778899999999888888888888889999


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP  205 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~  205 (308)
                      +|.|+++.+|.++.++|++++...+ ++++|.++.|++.+|...
T Consensus       248 ~p~~~~~~~g~~~~~~g~~~~~~~~-g~~ig~~~~g~l~~~~~~  290 (1140)
T PRK06814        248 LPLLAKETLGGDENVATLFLAVFSV-GVAVGSFLASKLSEGRIT  290 (1140)
T ss_pred             hHHHHHHHcCCchHHHHHHHHHHHH-HHHHHHHHHHHHhCCcee
Confidence            9999999999999999988766544 678889999999876543

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.41  E-value=2.8e-12  Score=120.53  Aligned_cols=165  Identities=16%  Similarity=0.242  Sum_probs=115.2

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      +.+..++...+++.|.+|+++|++.+++.+....+|+++||++++++.+.+                  .|+..|.+.++
T Consensus       104 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~------------------g~~~~~~~~~~  165 (392)
T PRK10473        104 GAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF------------------PWQSLFYTMAA  165 (392)
T ss_pred             hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc------------------ChHHHHHHHHH
Confidence            344556778899999999999999999999999999999999999876432                  26666666665


Q ss_pred             HHHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         82 FLMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        82 ~~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      ..++..+. ++..||+.++.    ++ +            .    ++..+..++.++|+.++...+...+.......+..
T Consensus       166 ~~~i~~~~~~~~~~~~~~~~----~~-~------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (392)
T PRK10473        166 MGILVLLLSLFILKETRPAR----AP-A------------A----SSKPRENSESLLNRFFLSRLVITTLSVTVILTFVN  224 (392)
T ss_pred             HHHHHHHHHHHHcCCCCCcc----cC-C------------c----cchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence            55444443 33444432111    00 0            0    01123446778898887666655555556667778


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +.|.|+++++|+++.+.+.+.....+ ..+++.++.+++.||+++|
T Consensus       225 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~i~~~~~~~~l~~r~g~~  269 (392)
T PRK10473        225 TSPVLLMEQMGFSRGEYAIIMALTAG-VSMTVSFSTPFALGIFKPR  269 (392)
T ss_pred             hCHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCHH
Confidence            88999999999999988876654433 4567888999999999854

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.40  E-value=3.7e-12  Score=118.37  Aligned_cols=175  Identities=15%  Similarity=0.174  Sum_probs=115.5

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+...+...+++.|++++++|+++.++...+..+|+++|+++++.+.....+.        ....|  +|+..|++.++
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~--------~~~~~--~w~~~~~~~~~  178 (394)
T TIGR00883       109 SLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD--------ALLEW--GWRIPFLVSAV  178 (394)
T ss_pred             hccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--------Hhhcc--chHHHHHHHHH
Confidence            456677888999999999999999999999999999999999988765422110        00112  47777777665


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChH--HHHHHHHHHHHHHHHHHHH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDI--LMYRTASSVLHILPIAGLY  159 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~--f~~~~l~~~~~~~~~~~~~  159 (308)
                      ..++..+.....||+. +.++++   +       ++    ++..+    ..+++++|+.  ++...+...+.....+.+.
T Consensus       179 ~~~~~~~~~~~~~~~~-~~~~~~---~-------~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (394)
T TIGR00883       179 LVLIGLYLRRNLEETP-VFEKAQ---E-------KH----KKKRG----PIRETLTKHRKPFLLGLGLVIATTTTFYLIT  239 (394)
T ss_pred             HHHHHHHHHHhcCCCh-hHHHHH---h-------cc----ccccC----CHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence            5443322222333321 110000   0       00    00011    1345555554  6666666667777788888


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +++|.|+++++|++..+++.+.....+ ..+++.+++|++.||+++|
T Consensus       240 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~  285 (394)
T TIGR00883       240 TYLPTYLTQTLGLSANSALLVLMLSLI-LFFITIPLSGALSDRIGRR  285 (394)
T ss_pred             HHHHHHHHHhcCCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHhchH
Confidence            999999999999999988876654433 4577888999999999855

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.39  E-value=2.7e-12  Score=124.77  Aligned_cols=186  Identities=10%  Similarity=0.101  Sum_probs=110.5

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      +|.+..++.+.+++.|++|+++|+++.+++..+..+|+++|+.++..+.....+.        ....|  +||..|++.+
T Consensus       130 ~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~--------~~~~~--gWR~~f~i~~  199 (490)
T PRK10642        130 FSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA--------NFLDW--GWRIPFFIAL  199 (490)
T ss_pred             hHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--------HhcCc--cHHHHHHHHH
Confidence            3567788999999999999999999999999888888888887776654321100        00122  4888888766


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhc-ChHHHHHH-HHHHHHHHHHHHH
Q psy11785         81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLK-NDILMYRT-ASSVLHILPIAGL  158 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~-n~~f~~~~-l~~~~~~~~~~~~  158 (308)
                      ++.++..+....+||+ |+..+.+.+.+.    ...+.. .+. . +.  .++++++ ++..+... ...++....++++
T Consensus       200 ~~~l~~~~~~~~~~es-p~~~~~~~~~~~----~~~~~~-~~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (490)
T PRK10642        200 PLGIIGLYLRHALEET-PAFQQHVDKLEQ----GDREGL-QDG-P-KV--SFKEIATKHWRSLLTCIGLVIATNVTYYML  269 (490)
T ss_pred             HHHHHHHHHHHcCCCC-hhHHHHHHhhhh----hccccc-ccc-c-cC--CHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            5444322222233332 221100000000    000000 000 0 00  1234443 33322222 2233455678889


Q ss_pred             HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      .+|+|.|+++.+|++..++++.... ...+.+++.+++|++.||+++|.
T Consensus       270 ~~~~p~~l~~~~g~s~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~grr~  317 (490)
T PRK10642        270 LTYMPSYLSHNLHYSEDHGVLIIIA-IMIGMLFVQPVMGLLSDRFGRRP  317 (490)
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccHH
Confidence            9999999999999998877665433 34456788889999999998763

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.38  E-value=6.2e-12  Score=118.85  Aligned_cols=158  Identities=16%  Similarity=0.174  Sum_probs=109.8

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      +.+..+|...+++.|++|+++|+++++++.+...+|.++||.+++++.+.+                  +|+..|.+.++
T Consensus       121 ~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~------------------gw~~~f~~~~~  182 (394)
T PRK10213        121 ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI------------------GWRNVFNAAAV  182 (394)
T ss_pred             hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------------------CHHHHHHHHHH
Confidence            345567888999999999999999999999999999999999999987643                  26666766665


Q ss_pred             HHHHHHHHHH-hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         82 FLMLAAVAMF-MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        82 ~~ll~~i~~~-~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      +.++..+.+. ..|+    .++++   +              +    ..+..++++|||.++...+..+......+++.+
T Consensus       183 l~~~~~l~~~~~~p~----~~~~~---~--------------~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  237 (394)
T PRK10213        183 MGVLCIFWIIKSLPS----LPGEP---S--------------H----QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFT  237 (394)
T ss_pred             HHHHHHHHHHHHCCC----CCccc---c--------------c----chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            5444332222 2222    11100   0              0    011245788999988776666666666777777


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhc
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKF  203 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~  203 (308)
                      +++.++.+++|+++.+++++.....+ +.++|.++.+++.||.
T Consensus       238 ~~~p~~~~~~g~s~~~~g~~~~~~~~-~~iig~~~~~~l~~r~  279 (394)
T PRK10213        238 YIRPVYMNLAGFGVDGLTLVLLSFGI-ASFVGTSLSSFILKRS  279 (394)
T ss_pred             HHHHHHHHhcCCChhHHHHHHHHHHH-HHHHHHHHHHHHHhcc
Confidence            87554556789999998886654433 5677788888888884

>PRK10133 L-fucose transporter; Provisional

Probab=99.38  E-value=5.2e-12  Score=121.15  Aligned_cols=187  Identities=12%  Similarity=0.164  Sum_probs=120.2

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCC---CCCCCC---CCchh--HHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIP---SDITPS---DPRWI--GAWW   73 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~---~~~~~~---~~~W~--gaWw   73 (308)
                      |.+...+...+++.|..++++|.+.++++.....+|+.+|+++|+.+.........+   ..+..+   .+||.  ..|+
T Consensus       130 g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~  209 (438)
T PRK10133        130 GLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQ  209 (438)
T ss_pred             HHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHH
Confidence            455667778888889877777777899999999999999999998776321100000   000001   23332  4688


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHH
Q psy11785         74 LGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHIL  153 (308)
Q Consensus        74 ~~fii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~  153 (308)
                      ..|+..+.+..+..+.+..  +..|+.+.++.+          + +    +.++..+..++++|||.++...+..++...
T Consensus       210 ~~f~~~~~v~~~~~~~~~~--~~~p~~~~~~~~----------~-~----~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~  272 (438)
T PRK10133        210 TPYMIIVAIVLLVALLIML--TKFPALQSDNHS----------D-A----KQGSFSASLSRLARIRHWRWAVLAQFCYVG  272 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHH--hcCCCCCccccc----------c-c----cccchhhhHHHHHhCchHHHHHHHHHHHHH
Confidence            8886544333322222211  222221110000          0 0    011234456789999998877777777777


Q ss_pred             HHHHHHhHHHHHH-HHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        154 PIAGLYTFLPKYF-ETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       154 ~~~~~~~~~P~yl-~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ..++...|+|.|+ |+.+|+++.++++.+....+ ++++|.+++|++.||+++|
T Consensus       273 ~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~-~~~vG~~~~g~l~~r~g~~  325 (438)
T PRK10133        273 AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMV-CFFIGRFTGTWLISRFAPH  325 (438)
T ss_pred             HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCHH
Confidence            7788888999995 67899999999987765544 6789999999999999754

>TIGR01272 gluP glucose/galactose transporter

Probab=99.38  E-value=5.7e-12  Score=115.50  Aligned_cols=194  Identities=13%  Similarity=0.127  Sum_probs=130.1

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+.+.+...+|+.|..++|++++.+++..+...+|..+||++++.++..... +........+ .....|+..|++.++
T Consensus        23 G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~-~~~~~~~~~~-~~~~~~~~~yl~ia~  100 (310)
T TIGR01272        23 GLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAG-DLSMQVATAN-AEAAKVHTPYLLLAG  100 (310)
T ss_pred             hHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCc-chhhhhhhhh-HHHHHHHHHHHHHHH
Confidence            66778889999999999999999999999999999999999999988743210 0000000000 112348888887776


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      +.++..+.+.+.+  .|+.+++..++.        . +  ++.. +    .++++++|.++...++.++...+-.++..|
T Consensus       101 ~~~~~~i~~~~~~--~p~~~~~~~~~~--------~-~--~~~~-~----~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w  162 (310)
T TIGR01272       101 ALAVLAIIFAFLP--LPELQEADVARV--------S-S--GDTT-Q----KTSAFQFTHLVLGALGIFVYVGAEVSAGSF  162 (310)
T ss_pred             HHHHHHHHHHHcc--CCCCCccccccc--------c-c--cccc-c----hhhHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6555555444432  333211110000        0 0  0000 1    134677888888888888877788899999


Q ss_pred             HHHHHHH--HhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHH
Q psy11785        162 LPKYFET--QFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITA  218 (308)
Q Consensus       162 ~P~yl~~--~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~  218 (308)
                      +|.|+++  ++|+++.++++..+.. ..++++|.++++++.||++.+  +.++++.+..
T Consensus       163 ~~~yl~~~~~~g~s~~~a~~~~s~~-~~~~~iGr~~~~~l~~r~g~~--~~l~~~~~l~  218 (310)
T TIGR01272       163 LVNFLSDPHALGLPEDQAAHFTAYT-WGGAMVGRFIGSAVMPMISQG--RYLAFNAFLA  218 (310)
T ss_pred             HHHHHHhcccCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHH
Confidence            9999985  4799999999887654 456789999999999999844  4444444333

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.38  E-value=8.8e-12  Score=117.10  Aligned_cols=160  Identities=15%  Similarity=0.274  Sum_probs=111.2

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+...+...++++|++++++|+++++++.++..+|..+||.+++++.+.+                  +|+..|.+.++.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------------gwr~~f~~~~~~  166 (382)
T PRK10091        105 HGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF------------------SWRYTFLLIAVF  166 (382)
T ss_pred             hHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc------------------cHHHHHHHHHHH
Confidence            44556777888999999999999999999999999999999999886532                  266667766665


Q ss_pred             HHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         83 LMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        83 ~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      .++..+. ++..|+.    ++++ +                .   +. +...+.+||+.++...+...+.....+.+.++
T Consensus       167 ~~~~~~~~~~~lp~~----~~~~-~----------------~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (382)
T PRK10091        167 NIAVLASIYFWVPDI----RDEA-K----------------G---GL-REQFHFLRSPAPWLIFAATMFGNAGVFAWFSY  221 (382)
T ss_pred             HHHHHHHHHHhCCCC----Cccc-c----------------c---CH-HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444333 2334432    1100 0                0   00 11234567777766655555555566666778


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +|.|+++++|+++.+++++.....+ +.++|.++.|++.||++.+
T Consensus       222 ~~~~~~~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~~r~~~~  265 (382)
T PRK10091        222 IKPYMMFISGFSETSMTFIMMLVGL-GMVLGNLLSGRLSGRYSPL  265 (382)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHhHHHheeccccCch
Confidence            8889998899999999987655443 5688999999999999754

>PRK03699 putative transporter; Provisional

Probab=99.37  E-value=1.2e-11  Score=116.74  Aligned_cols=163  Identities=10%  Similarity=0.148  Sum_probs=111.0

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+..++...+++.|++|+++|++.++.......+|..++|.+.++++..+                 ..|+..|.+.+++
T Consensus       109 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----------------~gw~~~f~~~~~~  171 (394)
T PRK03699        109 SGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS-----------------IEWYWVYACIGLV  171 (394)
T ss_pred             hHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------ccHHHHHHHHHHH
Confidence            45566778899999999999999999998888999999999988876422                 1377777776665


Q ss_pred             HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785         83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL  162 (308)
Q Consensus        83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~  162 (308)
                      .++..+..+ + ++.|+.++++.  +        +++   +..+       + ..++.++...+..++.....+++..|+
T Consensus       172 ~~~~~~~~~-~-~~~p~~~~~~~--~--------~~~---~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (394)
T PRK03699        172 YVAIFILTL-F-SEFPALGKHAP--K--------ADK---PVAK-------E-KWGIGVLFLAIAALLYILAQLTFISWV  228 (394)
T ss_pred             HHHHHHHHH-h-cCCccccccCc--c--------ccC---cccc-------c-cCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            554433332 2 22232111100  0        000   0000       1 113455555566666666777889999


Q ss_pred             HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      |.|+++++|+++.+++.+.+... .+..+|.+++|++.||+++|
T Consensus       229 p~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~  271 (394)
T PRK03699        229 PEYAQKKFGMSLEDAGNLVSNFW-MAYMVGMWIFSFIVRFFDLQ  271 (394)
T ss_pred             HHHHHHHcCCChHHhhHHHHHHH-HHHHHHHHHHHHHHHHhchh
Confidence            99999999999999998776543 35688999999999999865

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.37  E-value=5.7e-12  Score=119.63  Aligned_cols=161  Identities=13%  Similarity=0.071  Sum_probs=110.9

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML   85 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll   85 (308)
                      ..+...+++.|++|+++|+++.++..+...+|.++||.+++++.+.+                  .|+..|++.++..++
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~------------------~~~~~~~~~~~~~~~  188 (417)
T PRK10489        127 GVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG------------------GVAWNYGLAAAGTFI  188 (417)
T ss_pred             HHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH------------------hhHHHHHHHHHHHHH
Confidence            34556788899999999999999999999999999999999987632                  254556666555555


Q ss_pred             HHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy11785         86 AAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKY  165 (308)
Q Consensus        86 ~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~y  165 (308)
                      ..+.++.+|+..++. +   +++              ...++..+.++.+++||.+....+...+. ....++.+++|.|
T Consensus       189 ~~~~~~~l~~~~~~~-~---~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~  249 (417)
T PRK10489        189 TLLPLLRLPALPPPP-Q---PRE--------------HPLRSLLAGFRFLLASPVVGGIALLGGLL-TMASAVRVLYPAL  249 (417)
T ss_pred             HHHHHHhCCCCCCCC-c---ccc--------------cchHHHHHHHHHHHcChHHHHHHHHHHHH-HHHHhHHHhhHHH
Confidence            555555555432211 0   000              01123334566788898876555544433 2346778899999


Q ss_pred             HHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785        166 FETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK  204 (308)
Q Consensus       166 l~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~  204 (308)
                      +++.+|+++.++|++.+... .+.++|.++++++.||.+
T Consensus       250 ~~~~~g~~~~~~g~~~~~~~-~g~~ig~~~~~~l~~~~~  287 (417)
T PRK10489        250 ADEVWQMGAAQIGLLYAAVP-LGAALGALTSGWLAHSAR  287 (417)
T ss_pred             HHhccCCChhHhHHHHHHHH-HHHHHHHHHHHHhhhccC
Confidence            99999999999988765543 356778888899888744

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.37  E-value=4.3e-12  Score=119.25  Aligned_cols=176  Identities=16%  Similarity=0.115  Sum_probs=119.9

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .++..|...++.+|+  +++|++.+|.......+|.++||+++|++.+.+                  +|+..|.+.+++
T Consensus       108 ~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~------------------g~~~~f~~~~~~  167 (382)
T TIGR00902       108 FSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF------------------DEQNILAILTAG  167 (382)
T ss_pred             HccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc------------------ChhHHHHHHHHH
Confidence            445677888887664  577899999999999999999999999998753                  255556655444


Q ss_pred             HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785         83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL  162 (308)
Q Consensus        83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~  162 (308)
                      .++ .+..+.++++.+++++.+   +          + ..+    ..+..++++|||.++...+..++.......+.++.
T Consensus       168 ~~~-~~~~~~~~~~~~~~~~~~---~----------~-~~~----~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~  228 (382)
T TIGR00902       168 LAF-MLIGFLIKPTIPPKDAIP---E----------D-ESQ----GDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFS  228 (382)
T ss_pred             HHH-HHHHHHcCCCCCCCcccc---c----------c-ccc----cchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222 222333333321111100   0          0 000    11235789999999988888888888899999999


Q ss_pred             HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785        163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY  221 (308)
Q Consensus       163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~  221 (308)
                      |.|+++ +|.++.+.|++.+. ...+.+++.++.+++.||++.+  +.+.++.+...+.
T Consensus       229 ~~~l~~-~g~s~~~~g~l~~~-~~~~~i~~~~~~~~l~~r~g~~--~~l~~~~~~~~~~  283 (382)
T TIGR00902       229 AIYWQA-AGISASATGLLWGI-GVLAEIIIFAFSNKLFQNCSAR--DLLLISAIACVGR  283 (382)
T ss_pred             HHHHHH-CCCCHhHHHHHHHH-HHHHHHHHHHHhHHHHhhCCHH--HHHHHHHHHHHHH
Confidence            999986 89999999987764 3445567778889999998754  5555555444443

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK09952 shikimate transporter; Provisional

Probab=99.36  E-value=9.1e-12  Score=119.36  Aligned_cols=179  Identities=11%  Similarity=0.120  Sum_probs=110.8

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      +|.+..+|.+.+++.|++|+++|+++.+....+..+|+.+|..++.++.....+.        ....|  +||..|++.+
T Consensus       137 ~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~--------~~~~~--gWr~~f~~~~  206 (438)
T PRK09952        137 FAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDE--------QFLSW--GWRIPFLFSI  206 (438)
T ss_pred             hhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--------Hhhcc--ChHHHHHHHH
Confidence            3567788888999999999999999999999999999999988887765432110        00112  4888888876


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHH-HHHHHHHHHHHHH
Q psy11785         81 VFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTA-SSVLHILPIAGLY  159 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l-~~~~~~~~~~~~~  159 (308)
                      +..++. +.   +++..|+.++..++++     + .+ + .+.   +.+ ..+.++++|..+...+ ..++.....+.+.
T Consensus       207 ~~~l~~-~~---l~~~~~es~~~~~~~~-----~-~~-~-~~~---~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  270 (438)
T PRK09952        207 VLVLIA-LW---VRNGMEESAEFEQQQH-----E-QA-A-AKK---RIP-VIEALLRHPGAFLKIIALRLCELLTMYIVT  270 (438)
T ss_pred             HHHHHH-HH---HHHhCCCChhHHHHHh-----h-cc-c-ccc---cCC-HHHHHHHchHHHHHHHHHHHHHHHHHHHHH
Confidence            654332 22   2233333221111000     0 00 0 000   111 1234667776665544 3444566778888


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +|+|.|+++.+|++......+.... ....+++.++.|++.||+++|
T Consensus       271 ~~~~~y~~~~~g~s~~~~~~~~~~~-g~~~~i~~~~~g~l~Dr~grr  316 (438)
T PRK09952        271 AFALNYSTQNLGLPRELFLNIGLLV-GGLSCLTIPCFAWLADRFGRR  316 (438)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCch
Confidence            9999999999999887543222111 223466778899999999865

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.35  E-value=6e-12  Score=118.21  Aligned_cols=175  Identities=13%  Similarity=0.063  Sum_probs=116.3

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+...|...+++.|+  +++|++..+.......+|.++||++|+++.+.+                  +|+..|.+.++.
T Consensus       108 ~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~------------------g~~~~f~~~~~~  167 (382)
T PRK11128        108 FSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF------------------GEQAILWILTAG  167 (382)
T ss_pred             HcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc------------------ChhHHHHHHHHH
Confidence            455667777777776  456788888888888999999999999998753                  367777766654


Q ss_pred             HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785         83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL  162 (308)
Q Consensus        83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~  162 (308)
                      .++..+..+..|+..|+.++     +          ++.    ++..+.+++++|||.++...+..++......++.+++
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~-----~----------~~~----~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~  228 (382)
T PRK11128        168 VASMLLGQLLRPTIMPQGES-----R----------QQE----SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFS  228 (382)
T ss_pred             HHHHHHHHHccCCCCCcccc-----c----------ccc----ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHH
Confidence            44433333333332111100     0          000    0111246789999999888777777777777888899


Q ss_pred             HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHH
Q psy11785        163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVL  220 (308)
Q Consensus       163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~  220 (308)
                      |.|+++ .|++..+.|.+.+... .+.+++.++.|++.||++.+  +.+..+.+...+
T Consensus       229 ~~~~~~-~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~~r~~~~--~~l~~~~~~~~~  282 (382)
T PRK11128        229 AIYWQA-AGYSASTIGYLWSLGV-VAEVLIFAFSNRLFRRWSAR--DLLLLSAICGVV  282 (382)
T ss_pred             HHHHHH-CCCCHhHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHH
Confidence            999975 8999988888776443 35566778888999998754  444444443333

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.35  E-value=8.8e-12  Score=120.10  Aligned_cols=184  Identities=11%  Similarity=0.093  Sum_probs=115.5

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++...++++|+++ ++|++++|+..++..+|.+++|.+++++.+.+                  +|+..|++.++
T Consensus       121 ~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~------------------gwr~~f~~~~~  181 (455)
T TIGR00892       121 GLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF------------------GWRGSFLILGG  181 (455)
T ss_pred             cchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh------------------ChHHHHHHHHH
Confidence            344445666788899995 78999999999999999999999999887643                  37778888877


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccc-cCCCCCCcchH-HHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESN-QKNPSLKDFPK-AVKRLLKNDILMYRTASSVLHILPIAGLY  159 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~  159 (308)
                      +.++..+.++++.+..+..+..+.+.+....+....++ ..+...++..+ ...+++++|.++...++.++.....+...
T Consensus       182 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  261 (455)
T TIGR00892       182 LLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPI  261 (455)
T ss_pred             HHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchH
Confidence            66554444333322211110000000000000000000 00000011111 11367899999888887777777778888


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +++|.|+++ +|++..+++++.+...+ +.+++.+++|++.||.+.+
T Consensus       262 ~~l~~~~~~-~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~d~~~~~  306 (455)
T TIGR00892       262 IFLVPYAKD-KGVDEYEAAFLLSIIGF-VDIFARPSCGLIAGLKWIR  306 (455)
T ss_pred             HHHHHHHHH-cCCCHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccC
Confidence            899999976 79999999988765543 3466778889999985433

>PRK11043 putative transporter; Provisional

Probab=99.35  E-value=1.6e-11  Score=115.86  Aligned_cols=160  Identities=12%  Similarity=0.110  Sum_probs=113.6

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL   83 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~   83 (308)
                      +...+...+++.|+++++++++..+.......+|.++||.+++++.+.+                  +|+..|.+.++..
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------------------g~~~~~~~~~~~~  170 (401)
T PRK11043        109 CSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF------------------GWQAIFATLFAIT  170 (401)
T ss_pred             HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------------------ChHHHHHHHHHHH
Confidence            3344556778899999999999999999899999999999999887643                  3777777777666


Q ss_pred             HHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785         84 MLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP  163 (308)
Q Consensus        84 ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P  163 (308)
                      ++..+..+.++++.++++    +          +         +....+++++|+|.++...+...+....++.+.++.|
T Consensus       171 ~~~~~~~~~~~~~~~~~~----~----------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  227 (401)
T PRK11043        171 LLLILPTLRLKPSKKARK----Q----------S---------QDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSP  227 (401)
T ss_pred             HHHHHHHHHcCCCCCccc----c----------c---------hHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhH
Confidence            665555555544322100    0          0         0123467888999887666665566667778888999


Q ss_pred             HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|+++ +|+++.++++..... ..+.++|.++++++.||++.+
T Consensus       228 ~~~~~-~g~s~~~~g~~~~~~-~~~~~~g~~~~~~l~~r~~~~  268 (401)
T PRK11043        228 FILEQ-MGYSPADIGLSYVPQ-TIAFLVGGYGCRAALQKWGGE  268 (401)
T ss_pred             HHHHH-cCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCHH
Confidence            98875 799999888755332 335577888889999998744

>TIGR00895 2A0115 benzoate transport

Probab=99.34  E-value=7.6e-12  Score=116.52  Aligned_cols=185  Identities=13%  Similarity=0.127  Sum_probs=111.3

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++...+++.|++|+++|++++++...+..+|.++|+.+++++.+.+                  +|+..|.+.++
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------g~~~~~~~~~~  179 (398)
T TIGR00895       118 GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF------------------GWRSLFYVGGI  179 (398)
T ss_pred             ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc------------------cceeehhhhhh
Confidence            566778889999999999999999999999999999999999999887632                  25555666554


Q ss_pred             HHHHHHH-HHHhccCCCCCCCCccCCc--c----cc-c--CCC--c-cccccCCCCCCcchHHHHHhhcChHHHHHHHHH
Q psy11785         82 FLMLAAV-AMFMFPKTLTKASPVNGTT--T----VA-T--LPT--K-KESNQKNPSLKDFPKAVKRLLKNDILMYRTASS  148 (308)
Q Consensus        82 ~~ll~~i-~~~~~p~~~p~~~~~~~~~--~----~~-~--~~~--~-~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~  148 (308)
                      ..++..+ .++.+|+......+++.++  +    .. .  .+.  . .+++..++..++..+..++..+++..+...+..
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (398)
T TIGR00895       180 APLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLY  259 (398)
T ss_pred             HHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHH
Confidence            4333333 3344554422111110000  0    00 0  000  0 000000000111111122222233444444445


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .+.....+....++| ++.+.+|+++.+++++..... .+.++|.+++|++.||++++
T Consensus       260 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~  315 (398)
T TIGR00895       260 FMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFN-FGGVIGSIIFGWLADRLGPR  315 (398)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHhhcchH
Confidence            556667777888999 666778999999888765544 35688999999999999865

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.34  E-value=8.3e-12  Score=116.82  Aligned_cols=188  Identities=12%  Similarity=0.117  Sum_probs=110.6

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++...+++.|++|+++|+++.++..+...+|.++|+.+++.+.+.+.            .    .|+..|++.++
T Consensus       113 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~------------~----~w~~~f~~~~~  176 (405)
T TIGR00891       113 GMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG------------D----GWRALFFISIL  176 (405)
T ss_pred             hhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------------c----cHHHHHHHHHH
Confidence            5567788889999999999999999999999999999999999998876431            0    26666766554


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCccc-ccCCCc-cccccCCCCCCcchHHHHHhhc-C-hHHHHHHHHHHHHHHHHHH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTV-ATLPTK-KESNQKNPSLKDFPKAVKRLLK-N-DILMYRTASSVLHILPIAG  157 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~Ll~-n-~~f~~~~l~~~~~~~~~~~  157 (308)
                      ..++..+.....|++.+..++++.+++. +...+. .+++..+...++.....++..+ + +.+....+...+......+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (405)
T TIGR00891       177 PIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHP  256 (405)
T ss_pred             HHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence            4443333333444432111100000000 000000 0000000001111111111111 1 1233333333344455566


Q ss_pred             HHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       158 ~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ..+++|.|+++++|++..+++++.....+ +.++|.++.|++.||+++|
T Consensus       257 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~g~~  304 (405)
T TIGR00891       257 IQDLLPTYLKADLGLSPHTVANIVVFSNI-GAIVGGCVFGFLGDWLGRR  304 (405)
T ss_pred             hhhhhHHHHHHHhCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCch
Confidence            77889999999999999999987655443 5678999999999999865

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.33  E-value=1.5e-11  Score=130.68  Aligned_cols=183  Identities=15%  Similarity=0.064  Sum_probs=120.4

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      +.+...|...+++.|++|+++|++++|++.++..+|.++|+++|+++...+...      .+....|  .||..+++...
T Consensus       116 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~------~~~~~~~--~~~~~~~~~~~  187 (1146)
T PRK08633        116 QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGN------TPSEILG--RIAPAGLVLLA  187 (1146)
T ss_pred             HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc------ccccccc--chHHHHHHHHH
Confidence            456677888999999999999999999999999999999999999987642100      0111111  12332332222


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      ..++..+..+.+|+..+.... +.++            ......++....++.+++||.++...++.++.....+.+.++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (1146)
T PRK08633        188 VAVLGLIFAYRLPKVPAAAPE-VFDK------------KKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQAN  254 (1146)
T ss_pred             HHHHHHHHHhcCcCCCCCCcc-cccc------------cccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            222222333344443221111 0000            000111234456778899999888777777777777788899


Q ss_pred             HHHHHHHHhCCCcc-cccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        162 LPKYFETQFRLPSH-TANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       162 ~P~yl~~~~gls~~-~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +|.|+++.+|++.. +++++..... .+.++|.++.|++.||++.+
T Consensus       255 ~~~~~~~~~g~s~~~~~g~~~~~~~-ig~~~g~~~~g~l~~r~~~~  299 (1146)
T PRK08633        255 FPAYAKEVLGLDNTFQVQYLLAASA-IGIGIGSLLAGRLSGRHIEL  299 (1146)
T ss_pred             hHHHHHHHhCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhCCceEc
Confidence            99999999999998 8888765543 45678889999999998654

>TIGR00896 CynX cyanate transporter

Probab=99.32  E-value=2.8e-11  Score=112.24  Aligned_cols=161  Identities=14%  Similarity=0.098  Sum_probs=109.9

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL   83 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~   83 (308)
                      +...+...++++|.++ ++|+++++++..+..+|..+|+.+++.+.+.+.                ..|+..|++.++..
T Consensus       102 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~----------------~~w~~~f~~~~~~~  164 (355)
T TIGR00896       102 AIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG----------------GHWQQALAWWALPA  164 (355)
T ss_pred             HHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------hhHHHHHHHHHHHH
Confidence            3445566778888885 689999999999999999999999998865320                13777777665543


Q ss_pred             HHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785         84 MLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP  163 (308)
Q Consensus        84 ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P  163 (308)
                      ++..  +..+|+..++.++     +       ++ .   . .    ...++++|||.++...+...+.....+++.+|+|
T Consensus       165 ~~~~--~~~~~~~~~~~~~-----~-------~~-~---~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp  221 (355)
T TIGR00896       165 LLAL--LAWIPQVRRRVAA-----N-------QT-T---T-R----LTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLP  221 (355)
T ss_pred             HHHH--HHHhhhhccccCC-----C-------CC-C---C-C----CCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3322  2233433111100     0       00 0   0 0    0124667888887777666667777888899999


Q ss_pred             HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|+++ +|+++.+++++.....+ +.+++.++.|++.||++.+
T Consensus       222 ~~~~~-~g~~~~~~g~~~~~~~~-~~i~~~~~~g~l~dr~~~~  262 (355)
T TIGR00896       222 AILIS-HGASAATAGSLLALMQL-AQAASALLIPALARRVKDQ  262 (355)
T ss_pred             HHHHH-cCCCHHHHHHHHHHHHH-HHHHHHHhHHHHHhhhccc
Confidence            99986 69999999887765543 5688999999999999644

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK15075 citrate-proton symporter; Provisional

Probab=99.32  E-value=2.9e-11  Score=115.56  Aligned_cols=174  Identities=11%  Similarity=0.199  Sum_probs=107.5

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++...+++.|++|+++|++++++......+|..+|+.+|+.+.....+.        ....|  +||..|++..+
T Consensus       130 ~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~--------~~~~~--gWr~~f~~~~~  199 (434)
T PRK15075        130 SAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPA--------QMAEW--GWRIPFLIGCL  199 (434)
T ss_pred             cccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--------HHhcc--chHHHHHHHHH
Confidence            455566777899999999999999999999988888888888888875432110        00011  37777765433


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHH-HHHHHHHHHHHHHHHh
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYR-TASSVLHILPIAGLYT  160 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~-~l~~~~~~~~~~~~~~  160 (308)
                      ..    +.+++.++..|+.++...+ +            .+.+.++   .++++.+++..+.. .+...+.....++...
T Consensus       200 ~~----~~~~~~~~~~~e~~~~~~~-~------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (434)
T PRK15075        200 IV----PFIFLIRRSLEETEEFLAR-K------------HRPSMRE---IFRSLAANWRIVLAGMLMVAMTTVSFYLITV  259 (434)
T ss_pred             HH----HHHHHHHHhcCCCHHHHHh-h------------hcccccc---HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            21    1122233333322110000 0            0011112   23344556544433 2333345566778889


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      |+|.|+++.+|++..+++++..... .+.+++.+++|++.||+++|
T Consensus       260 ~~p~~l~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~Dr~g~r  304 (434)
T PRK15075        260 YTPTFGKTVLHLSAADSLLVTLCVG-VSNFIWLPIGGALSDRIGRR  304 (434)
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcch
Confidence            9999999999999988876554332 34578889999999999865

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.31  E-value=1.5e-11  Score=116.76  Aligned_cols=175  Identities=10%  Similarity=0.120  Sum_probs=107.7

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++...+++.|++|+++|++++++..++..+|+++++.+++.+.+.+                  +|+..|++.++
T Consensus       119 g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~------------------~w~~~f~i~~~  180 (426)
T PRK12307        119 GMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY------------------GWRAAFFVGLL  180 (426)
T ss_pred             HHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC------------------CHHHHHHHHHH
Confidence            456677888999999999999999999999999999999999988776532                  26666655433


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHH---HHHHHHHHH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSV---LHILPIAGL  158 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~---~~~~~~~~~  158 (308)
                      ..++ .   +++.+..|++++..+++. +   ++.  ++.+...++....+++++++|.+....+...   ......+.+
T Consensus       181 ~~~~-~---~~~~~~~p~~~~~~~~~~-~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (426)
T PRK12307        181 PVLL-V---IYIRARAPESKEWEEAKL-S---GKG--KHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPI  250 (426)
T ss_pred             HHHH-H---HHHHHHCCCChHHHHhhh-h---ccc--cccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Confidence            2221 1   122222233221110000 0   000  0000011112235678888887754433222   222333446


Q ss_pred             HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ..++|.|+++ .|+++.+.+.+..... .+.++|.++.|++.||+++|
T Consensus       251 ~~~~~~~~~~-~g~~~~~~~~~~~~~~-~~~~~g~~~~g~l~dr~~~~  296 (426)
T PRK12307        251 FGLLPTYLAG-EGFDTGVVSNLMTAAA-FGTVLGNIVWGLCADRIGLK  296 (426)
T ss_pred             HHHHHHHHHH-cCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccH
Confidence            7789999986 5999888887655443 34678889999999999865

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.30  E-value=2.4e-11  Score=114.55  Aligned_cols=169  Identities=16%  Similarity=0.158  Sum_probs=106.4

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      +.+...+...+++.|++|+++|++++++++....+|..+++++++.+.+.+                  .|+..|.+.++
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~~~~~~~  177 (406)
T PRK11551        116 GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA------------------AWRHIFYVGGV  177 (406)
T ss_pred             hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc------------------CHHHHHHHHHH
Confidence            345566788899999999999999999999999999999999998775432                  26666776665


Q ss_pred             HHHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         82 FLMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        82 ~~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      ..++..+. ++++|++.+ ..+.+.++        ++       .++..+...+..+++..+...+.........+.+..
T Consensus       178 ~~~~~~~~~~~~l~~~~~-~~~~~~~~--------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (406)
T PRK11551        178 GPLLLVPLLMRWLPESRA-FAQAAGAG--------KQ-------RAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLN  241 (406)
T ss_pred             HHHHHHHHHHHhCCCChh-HHhccCcc--------hh-------hhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            44443333 333454321 11110000        00       001111111111122222333334444556677888


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      |+|.|+++ .|++..+++++..... .+.+++.++.|++.||++++
T Consensus       242 ~~p~~~~~-~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g~~  285 (406)
T PRK11551        242 WLPSLLVG-QGLSRSQAGLVQIAFN-IGGALGSLLIGALMDRLRPR  285 (406)
T ss_pred             HHHHHHHh-CCCChhhhhHHHHHHH-HHHHHHHHHHHHHHHHHhHH
Confidence            99999986 6999999988766544 35678899999999999754

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.29  E-value=3.6e-11  Score=110.98  Aligned_cols=166  Identities=14%  Similarity=0.042  Sum_probs=107.8

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+..++....++.+++| ++|+++.++..++..+|..+++.+.+.+.+.+                  +|+..|++.+++
T Consensus       105 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~f~~~~~~  165 (377)
T TIGR00890       105 VGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE------------------GVPAAFIYMGII  165 (377)
T ss_pred             HHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc------------------cHHHHHHHHHHH
Confidence            44455667778888886 67999999999999999887665555554321                  377788888877


Q ss_pred             HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785         83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL  162 (308)
Q Consensus        83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~  162 (308)
                      .++..+..+.+.++.++++.++ +.         +       .++..+..++++|||.++...+..............+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~-~~---------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (377)
T TIGR00890       166 FLLVIVLGAFLIGYPPGQLIKT-NI---------E-------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLY  228 (377)
T ss_pred             HHHHHHHHHHheecCchhcccc-Cc---------c-------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHH
Confidence            6666655544444322211100 00         0       00111234678889888776666665555555566677


Q ss_pred             HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      |.|.+ .++++..+++++.....+ +.+++.++.|++.||+++|
T Consensus       229 ~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~  270 (377)
T TIGR00890       229 KPYGQ-SLGLSDGFLVLAVSISSI-FNGGGRPFLGALSDKIGRQ  270 (377)
T ss_pred             HHHHH-HcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Confidence            77765 478888887776554433 4578899999999999865

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.28  E-value=5.2e-11  Score=110.63  Aligned_cols=161  Identities=13%  Similarity=0.116  Sum_probs=107.2

Q ss_pred             ccccccchhhhcCccCCCCchhH--HHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLY--FAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~--~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      +...|...+++.|+.|+++|.+.  .++......+|.++||.+++++.+.+                  .|+..|++.++
T Consensus       102 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~------------------~~~~~f~~~~~  163 (375)
T TIGR00899       102 STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF------------------GFTVMFLTAAL  163 (375)
T ss_pred             hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc------------------ccHHHHHHHHH
Confidence            44567778888898888777644  68888888999999999999887532                  37778888777


Q ss_pred             HHHHHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         82 FLMLAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        82 ~~ll~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      ..++..+.. +..|+. |+.++++   +            .   .++    .++++++|.++...+..+........+..
T Consensus       164 ~~~~~~~~~~~~~~~~-~~~~~~~---~------------~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (375)
T TIGR00899       164 AFVLCGVLVWLFLPSY-PRGAPGA---L------------T---RLE----VRGLLASRDTRLLFVACTLMWGCNILYII  220 (375)
T ss_pred             HHHHHHHHHHHhCCCc-ccCcccc---c------------C---cch----hhhhhcCcchHHHHHHHHHHHHHHHHHHh
Confidence            655554443 335543 2111100   0            0   001    23356677666555555555555556677


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ++|.|+++++|+++.+++++.+... ...+++.+++|++.||+++|
T Consensus       221 ~~~~~~~~~~g~~~~~~g~~~~~~~-~~~~~~~~~~g~l~~r~g~~  265 (375)
T TIGR00899       221 NMPLLIIHELGLPDKLAGLMMGTAA-GLEIPFMLLAGYLIKRFGKR  265 (375)
T ss_pred             hhHHHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHhHHHHHHHhcch
Confidence            8999999999999999887665432 23456778899999999865

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK10504 putative transporter; Provisional

Probab=99.26  E-value=3.3e-11  Score=116.16  Aligned_cols=182  Identities=13%  Similarity=0.105  Sum_probs=117.4

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+...|...+++.|++|+++|++++|+......+|.++||.++|++.+.+                  +|+..|.+...
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~------------------gw~~~f~~~~~  172 (471)
T PRK10504        111 GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA------------------SWHWIFLINIP  172 (471)
T ss_pred             hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc------------------cHHHHHHHHHH
Confidence            456677888999999999999999999999999999999999999987642                  26566666554


Q ss_pred             HHHHHHHHH-HhccCCCCCCCCccCCcccc-----------cCCCcccc-----------------------ccCCCCCC
Q psy11785         82 FLMLAAVAM-FMFPKTLTKASPVNGTTTVA-----------TLPTKKES-----------------------NQKNPSLK  126 (308)
Q Consensus        82 ~~ll~~i~~-~~~p~~~p~~~~~~~~~~~~-----------~~~~~~~~-----------------------~~~~~~~~  126 (308)
                      ..++..+.. ...|+.. ...++.......           ...+.+..                       ++. ...+
T Consensus       173 ~~~l~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  250 (471)
T PRK10504        173 VGIIGAIATLMLMPNYT-MQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHAR-NNNR  250 (471)
T ss_pred             HHHHHHHHHHHhCCCcc-ccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence            433333332 2333322 111110000000           00000000                       000 0001


Q ss_pred             cchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        127 DFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       127 ~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                        +....+++|||.+....+..++..........+.|.|++.++|.++.+++++.... ..+.+++.++.|++.||+++|
T Consensus       251 --~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~r~g~~  327 (471)
T PRK10504        251 --ALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPM-VLGSMGMKRIVVQVVNRFGYR  327 (471)
T ss_pred             --CccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCch
Confidence              11124689999998888877777777777788999999999999999998776443 333455667889999999765

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.23  E-value=1.8e-10  Score=108.36  Aligned_cols=152  Identities=11%  Similarity=0.051  Sum_probs=100.4

Q ss_pred             cCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11785         15 DDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFP   94 (308)
Q Consensus        15 ~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p   94 (308)
                      .|..++++++.+.+....+..+|.++|..+.+++.+.+                  +|+..|++.+++.++..+..++++
T Consensus       123 ~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~------------------gw~~~f~~~a~l~~~~~~~~~~~~  184 (390)
T TIGR02718       123 AEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF------------------GQRPAFLLVACVPLASLVCVLWLK  184 (390)
T ss_pred             HHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------CHHHHHHHHHHHHHHHHHHHHHcC
Confidence            34445555555555555555666666666666665532                  388889988877766555555554


Q ss_pred             CCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCc
Q psy11785         95 KTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPS  174 (308)
Q Consensus        95 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~  174 (308)
                      ++.+++++    .+             +    ...+..++++|||.++...+..++.........++.|.|+++ .|+++
T Consensus       185 ~~~~~~~~----~~-------------~----~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~  242 (390)
T TIGR02718       185 DRAVASPE----AP-------------L----ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPL  242 (390)
T ss_pred             CCCcCccc----cc-------------h----hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCH
Confidence            43221100    00             0    011246788999987777666666667677788889999987 69999


Q ss_pred             ccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        175 HTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       175 ~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ++.|++.+...+...++|.+++|++.||++.+
T Consensus       243 ~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~  274 (390)
T TIGR02718       243 EWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW  274 (390)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            99999876554556678889999999999854

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.23  E-value=1.4e-10  Score=109.39  Aligned_cols=158  Identities=12%  Similarity=0.143  Sum_probs=101.6

Q ss_pred             cccccchhhhcCccCCCCc--hhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          5 AVYTLGIPYIDDNVANRES--PLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         5 ~~~~lg~a~i~d~~~~~~~--~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      ...|...+++.|+.++++|  +++.++..++..+|.++||.+++++.+.+                  +|+..|++.++.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~------------------gw~~~f~~~~~~  182 (393)
T PRK15011        121 TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF------------------SFTVMYLSAAVA  182 (393)
T ss_pred             hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc------------------ChHHHHHHHHHH
Confidence            4556777888888777655  45668889999999999999999987643                  388888888777


Q ss_pred             HHHHHHHHH-hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcCh-HHHHHHHHHHHHHHHHHHHHh
Q psy11785         83 LMLAAVAMF-MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKND-ILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        83 ~ll~~i~~~-~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~-~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      .++.+++++ ..|+. ++++++. + +        +   . +..+          +++ ..+...+.........+.+..
T Consensus       183 ~~~~~~~~~~~~~~~-~~~~~~~-~-~--------~---~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~  237 (393)
T PRK15011        183 FIVCGVMVWLFLPSM-RKELPLA-T-G--------T---L-EAPR----------RNRRDTLLLFVICTLMWGTNSLYII  237 (393)
T ss_pred             HHHHHHHHHhhcCcc-CCCCccc-c-c--------c---c-cccc----------cccccHHHHHHHHHHHHHHHHHHHH
Confidence            666655544 34443 2111100 0 0        0   0 0000          111 111122222333344556677


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ++|.|+++++|+++.+++++.+... ...+++.+++|++.||+++|
T Consensus       238 ~~p~~l~~~~~~~~~~~g~~~~~~~-~~~i~~~~~~G~l~dr~g~~  282 (393)
T PRK15011        238 NMPLFIINELHLPEKLAGVMMGTAA-GLEIPTMLIAGYFAKRLGKR  282 (393)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhChH
Confidence            9999999999999999988765433 34567889999999999866

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.22  E-value=1.6e-10  Score=108.67  Aligned_cols=160  Identities=13%  Similarity=0.075  Sum_probs=110.0

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL   83 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~   83 (308)
                      +...+...+++.|.+++++++++.++...+..+|+.+||.+++++.+.+                  +|+..|.+.++..
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------------------g~~~~f~~~~~~~  172 (394)
T PRK11652        111 GVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF------------------GWRACYLFLLLLG  172 (394)
T ss_pred             hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------------ChHHHHHHHHHHH
Confidence            3445566778889999999999999999999999999999999886532                  2666666665554


Q ss_pred             HHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785         84 MLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL  162 (308)
Q Consensus        84 ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~  162 (308)
                      ++..+. .++.||+.+++ ++                  +   ++..+.+++++|||.++...+..+........+..+.
T Consensus       173 ~~~~~~~~~~~~~~~~~~-~~------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (394)
T PRK11652        173 AGVTFSMARWMPETRPAD-AR------------------R---TRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACS  230 (394)
T ss_pred             HHHHHHHHHhCCccCccc-cc------------------h---hHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhC
Confidence            444333 33344431110 00                  0   0123456788899988766665555555666677788


Q ss_pred             HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785        163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK  204 (308)
Q Consensus       163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~  204 (308)
                      |.|+++.+|+++.+.+++... ..++.++|.++.+++.||++
T Consensus       231 ~~~~~~~~g~~~~~~~~~~~~-~~~~~~~g~~~~~~l~~~~~  271 (394)
T PRK11652        231 GVLMGAVLGLSSMTVSILFIL-PIPAAFFGAWFAGRPNKRFS  271 (394)
T ss_pred             hHHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence            999999999999988876533 34566777777888888776

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.20  E-value=1.9e-10  Score=108.88  Aligned_cols=160  Identities=13%  Similarity=0.156  Sum_probs=100.9

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      ++...|...+++.|++|+++|++++|+......+|.++||.+++++.+ +                  +|+..|.+.++.
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-~------------------g~~~~f~~~~~~  173 (400)
T PRK11646        113 GTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-Y------------------DFRLVCATGAVL  173 (400)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h------------------hHHHHHHHHHHH
Confidence            344556778899999999999999999999999999999999999873 2                  366666666655


Q ss_pred             HHHHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         83 LMLAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        83 ~ll~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      .++.++.. +..|+.    +..+.                   .++..+.++++++||.++...+..............+
T Consensus       174 ~~~~~i~~~~~~~~~----~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (400)
T PRK11646        174 FVLAAAFNAWLLPAY----KLSTV-------------------RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLM  230 (400)
T ss_pred             HHHHHHHHHHhCCcc----ccccc-------------------chhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHh
Confidence            54444332 233321    00000                   0012234678889998876655544444444455678


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP  205 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~  205 (308)
                      +|.|+++..+ ++.+.+++.+...+....+...++++..||++.
T Consensus       231 ~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~  273 (400)
T PRK11646        231 LPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRL  273 (400)
T ss_pred             hhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence            9999988766 667777665443333333333444444455543

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.20  E-value=4.7e-11  Score=113.63  Aligned_cols=186  Identities=14%  Similarity=0.116  Sum_probs=105.9

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHH---HhhhcccccCCCCCCCCCCCCchhHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILG---SFCTRLYVDLSIPSDITPSDPRWIGAWWLGLV   77 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lG---g~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fi   77 (308)
                      +|.+..++...+++.|++|+++|+++++++.++..+|.++|++++   +.....                  .+|+..|.
T Consensus       139 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~------------------~~w~~~f~  200 (481)
T TIGR00879       139 IGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT------------------LGWRIPLG  200 (481)
T ss_pred             hhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC------------------ccHHHHHH
Confidence            356677888999999999999999999999999999999999998   332221                  13666777


Q ss_pred             HHHHHHHHHHHHHHhccCCCCCC--CCccCC-cc-cccC-CCcccccc--------------CCCCCCcchHHHHHhhc-
Q psy11785         78 LVAVFLMLAAVAMFMFPKTLTKA--SPVNGT-TT-VATL-PTKKESNQ--------------KNPSLKDFPKAVKRLLK-  137 (308)
Q Consensus        78 i~g~~~ll~~i~~~~~p~~~p~~--~~~~~~-~~-~~~~-~~~~~~~~--------------~~~~~~~~~~~~~~Ll~-  137 (308)
                      +.++..++..+..+++|++.+..  +++.++ .+ .... ....++..              .....+...+..++..+ 
T Consensus       201 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (481)
T TIGR00879       201 LQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRR  280 (481)
T ss_pred             HHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCch
Confidence            75555554444455556542110  000000 00 0000 00000000              00000001122233322 


Q ss_pred             --ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        138 --NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       138 --n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                        .+.++...+..+........+..+.|.+++ ++|++..++++...... ...+++.+++|++.||+++|
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~  349 (481)
T TIGR00879       281 IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE-NAGVSTDHAFLVSIIVG-AVNFAFTFVAIFLVDRFGRR  349 (481)
T ss_pred             hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH-HcCCCchHHHHHHHHHH-HHHHHHHHHHHHHHHHhcch
Confidence              334444444444444444556667787765 57998877766554333 34578899999999999865

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.19  E-value=1.5e-10  Score=112.91  Aligned_cols=204  Identities=10%  Similarity=0.051  Sum_probs=111.8

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCC-------CCCCCCchhHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSD-------ITPSDPRWIGAWWL   74 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~-------~~~~~~~W~gaWw~   74 (308)
                      |.+..++...+|+.|++|+++|++++++.+....+|..+|+.++.++...+.+....++       ....+..|  +||.
T Consensus       128 ~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~WR~  205 (502)
T TIGR00887       128 GIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDY--MWRI  205 (502)
T ss_pred             HHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcc--cHHH
Confidence            45667788999999999999999999999999999999999999877543321000000       00001123  4888


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCCC--CCCccCC--cc-cc-----cCCCcccc-ccCCCCCCcchHHHHHhhcC----h
Q psy11785         75 GLVLVAVFLMLAAVAMFMFPKTLTK--ASPVNGT--TT-VA-----TLPTKKES-NQKNPSLKDFPKAVKRLLKN----D  139 (308)
Q Consensus        75 ~fii~g~~~ll~~i~~~~~p~~~p~--~~~~~~~--~~-~~-----~~~~~~~~-~~~~~~~~~~~~~~~~Ll~n----~  139 (308)
                      .|.+.++..++..+..+++||+..-  .+.++++  ++ ..     ..++..++ ++.++..++....+++++++    +
T Consensus       206 ~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  285 (502)
T TIGR00887       206 LIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWR  285 (502)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhH
Confidence            8877777666655555666765321  1111100  00 00     00000000 00000000011134455542    1


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccccccc-----------chhhhhhhhHHHhhhhheehhhccC
Q psy11785        140 ---ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMV-----------SGVGGILVMGIGIILSGVFILKFKP  205 (308)
Q Consensus       140 ---~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~-----------~g~~~i~~~~iG~~lgG~l~~r~~~  205 (308)
                         ..+...+..+......++...|.|.+++ +.|++..+++..           ...+...+.++|.+++++++||+++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gR  364 (502)
T TIGR00887       286 HGKHLLGTAGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGR  364 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence               1122222233344566778888999996 578876543311           1111222345678889999999997


Q ss_pred             Ccc
Q psy11785        206 NAR  208 (308)
Q Consensus       206 ~~~  208 (308)
                      |..
T Consensus       365 R~~  367 (502)
T TIGR00887       365 KPI  367 (502)
T ss_pred             hhH
Confidence            643

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.19  E-value=2.7e-10  Score=108.35  Aligned_cols=183  Identities=10%  Similarity=0.124  Sum_probs=117.2

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccC-CCC--CCCCCC------CCchhHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDL-SIP--SDITPS------DPRWIGAW   72 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~-~~~--~~~~~~------~~~W~gaW   72 (308)
                      |.+...+...+++.+..|+++|++.+++.+....+|..+||++++.+.....+. ..+  ....+.      +.++ ..|
T Consensus       107 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~w  185 (410)
T TIGR00885       107 GLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL-ASV  185 (410)
T ss_pred             hHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH-HHH
Confidence            445566777788889999999999999999999999999999999886431110 000  000000      0122 359


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHH
Q psy11785         73 WLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHI  152 (308)
Q Consensus        73 w~~fii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~  152 (308)
                      |..|++.+++.++..+.+.+.  +.|+.++.+   +        +    +.   +.....++++|||.++...++.++..
T Consensus       186 ~~~fl~~a~~~~~~~~~~~~~--~~p~~~~~~---~--------~----~~---~~~~~~~~~~~~~~~~~~~l~~f~yv  245 (410)
T TIGR00885       186 QTPYMIIGAVVLAVALLIMLT--KMPALNHSD---A--------K----QI---SFSASLSRLARIRHYREGVIAQFFYV  245 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh--cCCCCCccc---c--------c----cc---cchhhHHHHHhChhHHHHHHHHHHHH
Confidence            999998887666554433322  233211100   0        0    00   11123457889999988888877777


Q ss_pred             HHHHHHHhHHHHHHHHHh-CCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        153 LPIAGLYTFLPKYFETQF-RLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       153 ~~~~~~~~~~P~yl~~~~-gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ..-.+..++++.|+++.. +.+...++.+.... .....+|.++++++.||++.|
T Consensus       246 g~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~-~~~~~vGR~~~~~l~~r~~~~  299 (410)
T TIGR00885       246 GVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGA-MVIFFISRFIGTWLISYLAAH  299 (410)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCHH
Confidence            777788899999998643 45555444333332 345688999999999998654

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.19  E-value=1.7e-10  Score=108.29  Aligned_cols=158  Identities=16%  Similarity=0.164  Sum_probs=100.8

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+..+|...+.+.|..++++|+++++++.+...+|+++||.+++.+.+.+.              |...|+..++..+  
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~--------------~~~~~~~~~~~~~--  171 (381)
T PRK03633        108 CAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM--------------SVLPWVTGLVLAA--  171 (381)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc--------------chHHHHHHHHHHH--
Confidence            344556666777788899999999999999999999999999998865321              1123443322211  


Q ss_pred             HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785         83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL  162 (308)
Q Consensus        83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~  162 (308)
                          .+++++.+.+ ++ +.++              +   + .++    .++++|||.++...............+.+++
T Consensus       172 ----~~~~~~~~~~-~~-~~~~--------------~---~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  223 (381)
T PRK03633        172 ----ILPLLFTRIL-NQ-QAEN--------------H---D-STS----IWPMLKLRQARLGVNGCIISGIVLGSLYGLM  223 (381)
T ss_pred             ----HHHHHHhccc-CC-CCCC--------------C---C-CCC----HHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence                1111111111 11 0000              0   0 011    3456788887765544444445556677889


Q ss_pred             HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      |.|+++ .|.++.+++++..... .+.+++.++.|++.||++.+
T Consensus       224 p~~~~~-~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~~~~  265 (381)
T PRK03633        224 PLYLNH-QGMSDASIGFWMALLV-SAGILGQWPIGRLADRFGRL  265 (381)
T ss_pred             HHHHHH-cCCCHHHHHHHHHHHH-HHHHHHHhhhHHHHHHcCcH
Confidence            999986 5999988887665433 45678889999999999865

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.18  E-value=4.3e-10  Score=107.96  Aligned_cols=178  Identities=13%  Similarity=0.008  Sum_probs=110.3

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc-----ccccCCCCCCCCCCCCchhHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR-----LYVDLSIPSDITPSDPRWIGAWWLGLVL   78 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~-----~~v~~~~~~~~~~~~~~W~gaWw~~fii   78 (308)
                      +..++.+...+.+++|+++|++++|+......+|..++++++..+..     .+.. .... ..-.+..   +|+..+++
T Consensus       142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~-~~~~-~~~g~~~---~~~~~~~~  216 (462)
T PRK15034        142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGV-NGVP-QADGSVM---SLANAAWI  216 (462)
T ss_pred             HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc-cccc-ccccchH---HHHHHHHH
Confidence            44678889999999999999999999976667777666666554332     1211 0000 0000111   25555555


Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHH
Q psy11785         79 VAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGL  158 (308)
Q Consensus        79 ~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~  158 (308)
                      ..++.++.++..+++.++.++.   +                      .-.+..+.++|||..|..++..++.+..+.++
T Consensus       217 ~~~~~iv~~i~~~~~~~~~~~~---~----------------------~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~  271 (462)
T PRK15034        217 WVPLLAIATIAAWSGMNDIASS---R----------------------ASIADQLPVLQRLHLWLLSLLYLATFGSFIGF  271 (462)
T ss_pred             HHHHHHHHHHHHHHhCCCcccc---c----------------------cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHH
Confidence            5555555555544443322210   0                      11234567899999999999999999999999


Q ss_pred             HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785        159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI  216 (308)
Q Consensus       159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~  216 (308)
                      ..++|.|+++++.-  ..+ +....+......+..+++|++.||++.+  +.+.++.+
T Consensus       272 s~~lp~~~~~~~~~--~~~-l~~~~l~~l~~~l~rplgG~LADRiG~~--~vl~~~~i  324 (462)
T PRK15034        272 SAGFAMLAKTQFPD--VNI-LRLAFFGPFIGAIARSVGGAISDKFGGV--RVTLINFI  324 (462)
T ss_pred             HHHHHHHHHHHcCh--HHH-HHHHHHHHHHHHHHHHhhHHHHHhcCch--HHHHHHHH
Confidence            99999999998742  111 1111111223456778999999999865  44443333

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.17  E-value=1e-10  Score=112.78  Aligned_cols=85  Identities=15%  Similarity=0.164  Sum_probs=63.1

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++.+.+++.|++|+++|++++++...+..+|.++++++++.+.....+     ... +  .|  +||..|++.++
T Consensus       133 ~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-----~~~-~--~~--gWr~~f~~~~~  202 (479)
T PRK10077        133 GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDA-----SWL-N--TD--GWRYMFASEAI  202 (479)
T ss_pred             hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-----ccc-c--cC--ChHHHHHHHHH
Confidence            56777889999999999999999999999999999999999998877542110     000 1  11  37777887777


Q ss_pred             HHHHHHHHHHhccCC
Q psy11785         82 FLMLAAVAMFMFPKT   96 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~   96 (308)
                      ..++..+..+++||+
T Consensus       203 ~~~~~~~~~~~l~~s  217 (479)
T PRK10077        203 PALLFLMLLYFVPET  217 (479)
T ss_pred             HHHHHHHHHHcCCCC
Confidence            666665556666765

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.07  E-value=2.2e-09  Score=97.84  Aligned_cols=143  Identities=21%  Similarity=0.332  Sum_probs=111.4

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      +.+...+...+++.|++|+|+|++.+++......+|..+||.+++.+.+.+                  .|+..|.+.++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~~~~~~~  161 (352)
T cd06174         100 GGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL------------------GWRWLFLILAI  161 (352)
T ss_pred             ccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHH
Confidence            556778888999999999999999999999999999999999999987642                  26666666665


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      ..++..+..++++                                            |.++...+...+.......+..+
T Consensus       162 ~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~  197 (352)
T cd06174         162 LGLLLALLLLFLL--------------------------------------------RLLLLLALAFFLLSFGYYGLLTY  197 (352)
T ss_pred             HHHHHHHHHHHHH--------------------------------------------HHHHHHHHHHHHHHhHHHHHHHH
Confidence            5554444333322                                            34455556666777788889999


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      .|.++++.++.+..+.+....... .+..++.++.|++.||+++|.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  242 (352)
T cd06174         198 LPLYLQEVLGLSAAEAGLLLSLFG-LGGILGALLGGLLSDRLGRRR  242 (352)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhh
Confidence            999999998999999988765544 356788899999999998663

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.05  E-value=3.7e-09  Score=99.50  Aligned_cols=161  Identities=16%  Similarity=0.157  Sum_probs=98.3

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML   85 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll   85 (308)
                      .++...+++.|++|+++|++++|+......+|.++||.+++.+.+.+                  .|+..|.+.++..++
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~~~~  184 (408)
T PRK09874        123 FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY------------------GLRPVFFITASVLFL  184 (408)
T ss_pred             hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------CHHHHHHHHHHHHHH
Confidence            45677788999999999999999999999999999999999887642                  266667766665554


Q ss_pred             HHHHHH-hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHH-HHHHHHHHHHHHHhHHH
Q psy11785         86 AAVAMF-MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTA-SSVLHILPIAGLYTFLP  163 (308)
Q Consensus        86 ~~i~~~-~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l-~~~~~~~~~~~~~~~~P  163 (308)
                      ..+..+ +.|++.++.++ +   +             +.   + .+...+.++|+.++...+ ...........+..++|
T Consensus       185 ~~~~~~~~~~~~~~~~~~-~---~-------------~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (408)
T PRK09874        185 CFLVTLFCIRENFQPVSK-K---E-------------ML---H-MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILT  243 (408)
T ss_pred             HHHHHHHHhccCcccccc-h---h-------------hh---H-HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444333 33332111100 0   0             00   0 122345667777654332 23333444556677889


Q ss_pred             HHHHHHhCCCccc---ccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        164 KYFETQFRLPSHT---ANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       164 ~yl~~~~gls~~~---agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|++++.+.....   .+++..... .+.+++.++.|++.||++++
T Consensus       244 ~~~~~~~~~~~~~~~~~g~~~~~~~-l~~~~~~~~~g~l~dr~g~~  288 (408)
T PRK09874        244 LYVRELAGNVSNIAFISGMIASVPG-VAALLSAPRLGKLGDRIGPE  288 (408)
T ss_pred             HHHHHHhccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccccc
Confidence            9988765533221   222222221 23456677789999999865

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.01  E-value=1.9e-09  Score=104.43  Aligned_cols=49  Identities=10%  Similarity=0.052  Sum_probs=43.3

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      .+..++...+++.|++|+++|+++++++.....+|..+||.+++++.+.
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~  170 (496)
T PRK03893        122 MAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPV  170 (496)
T ss_pred             HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3456677788999999999999999999999999999999999988764

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.01  E-value=2.3e-09  Score=101.97  Aligned_cols=154  Identities=11%  Similarity=0.061  Sum_probs=94.6

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy11785         20 NRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTK   99 (308)
Q Consensus        20 ~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p~~~p~   99 (308)
                      ++++++.+|.......+|.++||.++|++.+.                   .|+..|++.+++.++..+.++..+++.++
T Consensus       136 ~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-------------------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  196 (420)
T PRK09528        136 SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-------------------NPQINFWLGSGSALILLVLLFFAKPDAPS  196 (420)
T ss_pred             HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-------------------CchHhHHHHHHHHHHHHHHHhcccccccc
Confidence            34567788888889999999999999988642                   15556776666555544444443333222


Q ss_pred             CCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh---CCCccc
Q psy11785        100 ASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQF---RLPSHT  176 (308)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~---gls~~~  176 (308)
                      +.+.+ +++        + ++.   .+...+..++++|||.++...+...........+..++|.|+++.+   +.+..+
T Consensus       197 ~~~~~-~~~--------~-~~~---~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (420)
T PRK09528        197 TAKVA-NAL--------G-ANA---SAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRV  263 (420)
T ss_pred             hhhhc-cch--------h-ccc---ccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHH
Confidence            11100 000        0 000   0112344667889998776666555555555556667888887765   455555


Q ss_pred             ccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        177 ANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       177 agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|.+.+...+ ..+++.+++|++.||+++|
T Consensus       264 ~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~  292 (420)
T PRK09528        264 FGYLNSFQVF-LEALIMFFAPFIINRIGAK  292 (420)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHhCcc
Confidence            6665554433 3467889999999999876

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.00  E-value=4.7e-09  Score=98.93  Aligned_cols=166  Identities=11%  Similarity=0.066  Sum_probs=99.7

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML   85 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll   85 (308)
                      ..+...++++|..  +++++.+|.......+|.++||.++|.+.++                   .|+..|.+.+++.++
T Consensus       116 ~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-------------------~~~~~f~~~~~~~~~  174 (396)
T TIGR00882       116 GAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI-------------------DPQIVFWLGSGFALI  174 (396)
T ss_pred             chhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc-------------------CchHHHHHHHHHHHH
Confidence            3444455555532  3345677888888899999999999987542                   266677777766666


Q ss_pred             HHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy11785         86 AAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKY  165 (308)
Q Consensus        86 ~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~y  165 (308)
                      ..+..+...++.|++++.+ + +       .+.++.    +.-.+..++++|||.++...+...........+..++|.|
T Consensus       175 ~~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y  241 (396)
T TIGR00882       175 LMLLLMFAKPKAPSSATVA-N-A-------LGANAS----AFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANF  241 (396)
T ss_pred             HHHHHHHhCCCCchhhhhh-c-c-------cccccC----CCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5554444333322211100 0 0       000000    1112456889999998777666665555666677788999


Q ss_pred             HHHHh---CCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        166 FETQF---RLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       166 l~~~~---gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +++.+   +.+....|++.....+ ...++.+..|++.||+++|
T Consensus       242 ~~~~~~~~~~~~~~~g~~~~~~~i-~~~~~~~~~g~l~~r~g~~  284 (396)
T TIGR00882       242 FTSFFATPQQGTRVFGYVTTMGEL-LNALIMFCAPLIINRIGAK  284 (396)
T ss_pred             HHHhccccccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccc
Confidence            98876   4444555655443322 3355678889999999866

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=98.99  E-value=3.2e-09  Score=101.02  Aligned_cols=174  Identities=16%  Similarity=0.162  Sum_probs=109.7

Q ss_pred             hhhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy11785         11 IPYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVA   89 (308)
Q Consensus        11 ~a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~   89 (308)
                      .++..|.. ++++|++..++......+|..++.++++.+.....+         .+..+  +|+..|++.+++.++..+.
T Consensus       121 ~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~---------~~~~~--g~~~~~~i~~~l~~~~~~~  189 (437)
T TIGR00792       121 WSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG---------GDDKF--GWFMFALVLALIGVVSLII  189 (437)
T ss_pred             hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------Ccccc--cHHHHHHHHHHHHHHHHHH
Confidence            45666766 478999999998888889888888887776653211         01111  4777788877776666554


Q ss_pred             HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy11785         90 MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQ  169 (308)
Q Consensus        90 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~  169 (308)
                      .+.+-++.+++.+.             +++ .+   .++.+.++++++||.++...+..++.....+.+..+.+.|++..
T Consensus       190 ~~~~~~e~~~~~~~-------------~~~-~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (437)
T TIGR00792       190 CFFGTKERYSEIPK-------------NIE-KK---LSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYV  252 (437)
T ss_pred             HHcCCEecCCCCCc-------------ccc-cC---CCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeee
Confidence            43332221111000             000 00   12445678899999998888887777777777777778777766


Q ss_pred             hCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785        170 FRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI  216 (308)
Q Consensus       170 ~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~  216 (308)
                      ++ ++.+.+.+.... ..+.+++.++.+++.||++.|  +...++.+
T Consensus       253 ~~-~~~~~~~~~~~~-~i~~ii~~~~~~~l~~r~g~~--~~~~~~~~  295 (437)
T TIGR00792       253 LG-DPELFSYMGSIA-IVAGLIGVLLFPRLVKKFGRK--ILFAGGIL  295 (437)
T ss_pred             cC-ChHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcH--HHHHHHHH
Confidence            66 444555444333 345678888999999999854  44444333

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=98.97  E-value=1.8e-09  Score=109.31  Aligned_cols=90  Identities=12%  Similarity=0.148  Sum_probs=63.1

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..+|+..+++.|++|+++|+++++++.+...+|.++++.++.+++..+ +|.......   . ...+||..|++.++
T Consensus       268 g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~-G~~~~~g~~---~-~~~gWR~l~~i~~l  342 (742)
T TIGR01299       268 GIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY-GWSFQMGSA---Y-QFHSWRVFVIVCAF  342 (742)
T ss_pred             HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhccccc---c-ccccHHHHHHHHHH
Confidence            445667899999999999999999999999999999999999998876543 111100000   0 01247777777766


Q ss_pred             HHHHHHHHHHhccCC
Q psy11785         82 FLMLAAVAMFMFPKT   96 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~   96 (308)
                      ..++..+.++++||+
T Consensus       343 p~ll~ll~~~~lPES  357 (742)
T TIGR01299       343 PCVFAIGALTFMPES  357 (742)
T ss_pred             HHHHHHHHHHHcCCC
Confidence            665555555666765

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.95  E-value=2.4e-08  Score=92.64  Aligned_cols=187  Identities=17%  Similarity=0.184  Sum_probs=131.5

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCC-CCCch----hHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITP-SDPRW----IGAWWLGL   76 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~-~~~~W----~gaWw~~f   76 (308)
                      |-+.+.+.+.+|+.+.-++++.++.+.+.+....+|.++||++|+.++..  ++-  ....+ ....|    ...|+..|
T Consensus       117 Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils--~~~--~~~~~~~~~~~~~~~~~~v~~pY  192 (422)
T COG0738         117 GIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS--GVA--LTMSAAQILAIKGADASSVQFPY  192 (422)
T ss_pred             hhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh--hhh--hccCHHHHHHHHHHHHHhhhhHH
Confidence            44567788899999999999999999999999999999999999988642  000  00000 00012    23477888


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHH
Q psy11785         77 VLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIA  156 (308)
Q Consensus        77 ii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~  156 (308)
                      ++.+...+++++....  .++|+.++...+              ..+ .++.  ...+++|||.+...+++.++...+=.
T Consensus       193 l~~~~~lvll~v~~~~--~k~p~~~~~~~~--------------~~~-~~~~--~~~~l~~~~~~~~gvl~~FlYVG~Ev  253 (422)
T COG0738         193 LILAGLLVLLAVLILL--SKLPDLQVAAPS--------------LGA-SGSA--GLSSLFQNKHLRLGVLAIFLYVGAEV  253 (422)
T ss_pred             HHHHHHHHHHHHHHHh--ccCCcCCccccc--------------ccc-cccc--hHHHHHhChHHHHHHHHHHHHHhHHH
Confidence            8887776666554433  222332211000              000 0111  35789999999999999999999999


Q ss_pred             HHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHH
Q psy11785        157 GLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWI  214 (308)
Q Consensus       157 ~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~  214 (308)
                      ....|++.|+++..|++..+++.+.... ..+.++|-++|.++++|++.+  +.+.+.
T Consensus       254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~-~~~~~vGRFig~~lm~~~~~~--k~Laf~  308 (422)
T COG0738         254 AIGSFLVSYLEELLGLNEQQAAYYLSFF-WVGFMVGRFIGSALMSRIKPE--KYLAFY  308 (422)
T ss_pred             HHHHHHHHHHHhcCCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCHH--HHHHHH
Confidence            9999999999998899988888776543 557789999999999988754  554443

>PRK10054 putative transporter; Provisional

Probab=98.95  E-value=2.4e-09  Score=101.21  Aligned_cols=160  Identities=14%  Similarity=0.137  Sum_probs=101.2

Q ss_pred             cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785          5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM   84 (308)
Q Consensus         5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l   84 (308)
                      ...+...+++.|.+|+++|++++|+.+....+|.++||.+++++.+.                   .|+..|.+.++..+
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~-------------------g~~~~f~~~~~~~~  172 (395)
T PRK10054        112 VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQ-------------------SINLPFWLAAICSA  172 (395)
T ss_pred             HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------------ccCcHHHHHHHHHH
Confidence            34566778889999999999999999999999999999999988642                   25566776665555


Q ss_pred             HHHHHH-HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785         85 LAAVAM-FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP  163 (308)
Q Consensus        85 l~~i~~-~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P  163 (308)
                      +..+.. +..||+.|+++++    +          +       +. ...++++|||.++...+..++.......+..+.+
T Consensus       173 i~~i~~~~~~~~~~~~~~~~----~----------~-------~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  230 (395)
T PRK10054        173 FPLVFIQIWVQRSEKAIATE----T----------G-------SV-WSPSVLLQDKALLWFTCSGFLASFVSGAFASCIS  230 (395)
T ss_pred             HHHHHHHHHHhccccccccc----h----------h-------hh-hhhhhhccCceehHHHHHHHHHHHHHHHhhhhHH
Confidence            443333 3345543221100    0          0       00 1136778999988777777777766666777888


Q ss_pred             HHHHHHh--CCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        164 KYFETQF--RLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       164 ~yl~~~~--gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .|+....  +.+....+.+.....+ .........|++.||+++|
T Consensus       231 ~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~g~~~~~~~~~  274 (395)
T PRK10054        231 QYVMVVADSDFAEKVVAVVLPVNAA-MVVSLQYSVGRRLNAANIR  274 (395)
T ss_pred             HHHHHhcccchHHHHHHHHHHhhhh-heeeehhHHHHHHccCCch
Confidence            8886543  3444444544332221 1222334556777777654

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=98.93  E-value=1.8e-08  Score=94.89  Aligned_cols=155  Identities=14%  Similarity=0.095  Sum_probs=91.0

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+...+...+++.|++|+++|++++++...+..+|.++|+.+++++.+.+                  +|+..|++.++
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------------g~~~~~~~~~~  186 (399)
T PRK05122        125 GESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG------------------GLAGLGLLIML  186 (399)
T ss_pred             hHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc------------------cHHHHHHHHHH
Confidence            456667777888899999999999999999999999999999999987643                  25555555444


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      ..++..   ++..+ .|+.++.+   +            .+   ++..+..++..++      .+...+.........++
T Consensus       187 ~~~~~~---~~~~~-~~~~~~~~---~------------~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~  238 (399)
T PRK05122        187 LALLGL---LLARP-RPAVPPVK---G------------ER---LPFRRVLGRVWPY------GMGLALASIGFGTIATF  238 (399)
T ss_pred             HHHHHH---HHHhc-CCCCCCCC---c------------cc---hhHHHHHHHHHHH------HHHHHHHHHHHHHHHHH
Confidence            332221   11111 12211100   0            00   0111112222111      11222333445566788


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +|.|+++ .++  +++++...... .+.+++.++.|++.||++++
T Consensus       239 ~~~~~~~-~~~--~~~~~~~~~~~-~~~~~~~~~~g~l~~r~~~~  279 (399)
T PRK05122        239 ITLYYAA-RGW--DGAALALTLFG-VAFVGARLLFGNLINRLGGL  279 (399)
T ss_pred             HHHHHHH-ccc--ccchHHHHHHH-HHHHHHHHHHHHHHHHhccH
Confidence            8988875 455  33444433332 34567888999999998754

>TIGR00898 2A0119 cation transport protein

Probab=98.92  E-value=4.6e-09  Score=102.12  Aligned_cols=178  Identities=13%  Similarity=0.091  Sum_probs=100.1

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      +|.+..++...+++.|++|+++|+++.++...+..+|.++++++++++.+                     |+..|++.+
T Consensus       192 ~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---------------------wr~~~~~~~  250 (505)
T TIGR00898       192 MGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---------------------WRWLQLAVS  250 (505)
T ss_pred             hhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---------------------HHHHHHHHH
Confidence            35677788999999999999999999999999999999999998865421                     666677777


Q ss_pred             HHHHHHHHHHHhccCCCCCC--CCccCCc-c-c--------ccCCCc----cccccCCCCCCcchHHHHHhhcChHHHHH
Q psy11785         81 VFLMLAAVAMFMFPKTLTKA--SPVNGTT-T-V--------ATLPTK----KESNQKNPSLKDFPKAVKRLLKNDILMYR  144 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~--~~~~~~~-~-~--------~~~~~~----~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~  144 (308)
                      +..++..+..+++||+.+..  +.+.++. + .        ......    ..+++.+. .+ .....++++++|.+...
T Consensus       251 i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~l~~~~~~~~~  328 (505)
T TIGR00898       251 LPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSS-SK-KQYSFLDLFRTPNLRKT  328 (505)
T ss_pred             HHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhh-cc-CCCcHHHHhCChHHHHH
Confidence            66666555556666642210  0000000 0 0        000000    00000000 00 01246788999987666


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        145 TASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       145 ~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .+...+..+........++.++ ..++.+.....++.+    ...+.+.+++++++||+++|
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~i~~~~~~~~l~dr~grr  385 (505)
T TIGR00898       329 TLCLMMLWFTTAFSYYGLVLDL-GNLGGNIYLDLFISG----LVELPAKLITLLLIDRLGRR  385 (505)
T ss_pred             HHHHHHHHHHHHHHHHHHhccc-cccCCChHHHHHHHH----HHHHHHHHHHHHHHHHhCCH
Confidence            5554433332222112222222 234444333333322    23356778889999999865

>PRK12382 putative transporter; Provisional

Probab=98.89  E-value=2.3e-08  Score=93.92  Aligned_cols=50  Identities=14%  Similarity=0.017  Sum_probs=42.9

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      |.+...+...+++.|++|+|+|++++|+...+..+|.++||.+++++.+.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~  174 (392)
T PRK12382        125 GESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH  174 (392)
T ss_pred             HHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34455666778889999999999999999999999999999999988653

>cd00104 KAZAL_FS Kazal type serine protease inhibitors and follistatin-like domains

Probab=98.89  E-value=7.6e-10  Score=70.01  Aligned_cols=28  Identities=43%  Similarity=1.238  Sum_probs=24.3

Q ss_pred             CCCCCcceeeCCCCceecCcccccccccc
Q psy11785        262 CDHSKFNPICGGDGRTYFSACHAGCQNIS  290 (308)
Q Consensus       262 C~~~~~~PvC~~~g~ty~SpC~AGC~~~~  290 (308)
                      |+. .|+||||+||+||.||||++|....
T Consensus         1 C~~-~~~pVCgsdg~tY~n~C~~~~~~c~   28 (41)
T cd00104           1 CPK-EYDPVCGSDGKTYSNECHLGCAACR   28 (41)
T ss_pred             CCC-CCCccCCCCCCEECCHhhhhHHhhc
Confidence            654 4799999999999999999998655

Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the cognate enzyme as substrate. The reactive site peptide bond is a combining loop which has an identical conformation in all Kazal inhibitors and in all enzyme/inhibitor complexes. These Kazal domains (small hydrophobic core of alpha/beta structure with 3 to 4 disulfide bonds) often occur in tandem arrays. Similar domains are also present in follistatin (FS) and follistatin-like family members, which play an important role in tissue specific regulation. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a Kazal-like domain and has five disulfide bonds. Although the Kazal-like FS substructure is similar to Kazal proteinase inhibitors, no FS domain has yet been shown to be a proteinase inhibitor.

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=98.87  E-value=1.4e-08  Score=99.48  Aligned_cols=167  Identities=12%  Similarity=0.134  Sum_probs=109.2

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+...|.-.+++.|.+|+++.+.+.++..+...+.-++||.+||.++..+                 |.- ..|++.++.
T Consensus       117 ~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~-----------------G~~-~~f~inals  178 (524)
T PF05977_consen  117 SAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF-----------------GAA-AAFLINALS  178 (524)
T ss_pred             HHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH-----------------HHH-HHHHHHHHH
Confidence            44556777899999999999999999999999999999999999998753                 222 236655554


Q ss_pred             HHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHH
Q psy11785         83 LMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFL  162 (308)
Q Consensus        83 ~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~  162 (308)
                      .++..+.+...+++.++.   +..              .+...+++...++.+.++|......+..++......++...+
T Consensus       179 fl~~i~~l~~~~~~~~~~---~~~--------------~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLl  241 (524)
T PF05977_consen  179 FLISILALLRWKPPPPPS---SLP--------------RERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALL  241 (524)
T ss_pred             HHHHHHHHHHcccccccc---ccc--------------hhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhh
Confidence            444333333332221110   000              001123444556667777876555554444455555667789


Q ss_pred             HHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785        163 PKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP  205 (308)
Q Consensus       163 P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~  205 (308)
                      |.+.++++|.++...|++.+...+ |+++|.++.+++.+|++.
T Consensus       242 Pl~a~~~l~~~a~~yGll~a~~gv-Gai~Gal~~~~l~~~~~~  283 (524)
T PF05977_consen  242 PLFARDVLGGGASGYGLLLAAFGV-GAILGALLLPRLRRRLSS  283 (524)
T ss_pred             hHHHHHHhCCcHHHHHHHHHHHHH-HHHHHHHHHHHhhcccCc
Confidence            999999999999999998776543 556666666666665543

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.78  E-value=1.2e-07  Score=86.87  Aligned_cols=171  Identities=15%  Similarity=0.110  Sum_probs=114.2

Q ss_pred             ccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q psy11785          8 TLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAA   87 (308)
Q Consensus         8 ~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~   87 (308)
                      .+-++.|.+.||+ +-+..+|++.+...+|.++|+.+.-.+.+..                 ++|+....+-+.+.++..
T Consensus       118 VLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~-----------------~gW~~aL~~WAl~allAl  179 (395)
T COG2807         118 VLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHS-----------------GGWRGALGFWALLALLAL  179 (395)
T ss_pred             HhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-----------------ccHHHHHHHHHHHHHHHH
Confidence            4557788888865 4588899999999999999988877776542                 346666665555555543


Q ss_pred             HHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy11785         88 VAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFE  167 (308)
Q Consensus        88 i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~  167 (308)
                      +.+  +|....+... +.+               ++..     ....++|||.-|...+...+.+..+|..+.|+|+++.
T Consensus       180 ~~W--lPq~~r~~~~-~~~---------------~~~~-----~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili  236 (395)
T COG2807         180 LIW--LPQALREQAA-SIA---------------TKLV-----SVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILI  236 (395)
T ss_pred             HHH--hhhccccccc-ccc---------------cccc-----cccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            333  3442111100 000               0000     0135789999999999999999999999999999998


Q ss_pred             HHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHH
Q psy11785        168 TQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYA  222 (308)
Q Consensus       168 ~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~  222 (308)
                      + .|+|+.++|.+.+...+. .+...+++-.+.+|.+- .|........++.++.
T Consensus       237 ~-~G~sa~~aG~llsl~~l~-~~~~~ll~P~la~R~~n-~r~~~~~~~~~~l~G~  288 (395)
T COG2807         237 D-RGLSAAEAGSLLSLMQLA-QLPTALLIPLLARRSKN-QRPLVVLALLLMLVGL  288 (395)
T ss_pred             H-cCCCHHHhhhHHHHHHHH-HHHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHH
Confidence            6 699999999988776654 45567788888888543 3333333333344443

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=98.76  E-value=1.3e-07  Score=92.18  Aligned_cols=78  Identities=10%  Similarity=0.107  Sum_probs=59.7

Q ss_pred             CccccccccchhhhcCccCCC--CchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANR--ESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVL   78 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~--~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii   78 (308)
                      +|++...|...+++.|.+|++  +|.+++++++++..+|+++||.+++++.+.+                  +||..|.+
T Consensus       117 ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~------------------gw~~~F~i  178 (489)
T PRK10207        117 VGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF------------------GYSVTYNL  178 (489)
T ss_pred             hccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh------------------ChHHHHHH
Confidence            477888899999999999887  4577899999999999999999999997643                  37888888


Q ss_pred             HHHHHHHHHHHHHhccCC
Q psy11785         79 VAVFLMLAAVAMFMFPKT   96 (308)
Q Consensus        79 ~g~~~ll~~i~~~~~p~~   96 (308)
                      .++..++..+.+...++.
T Consensus       179 ~~i~~~~~~~~~~~~~~~  196 (489)
T PRK10207        179 CGAGLIIALLVYFACRGM  196 (489)
T ss_pred             HHHHHHHHHHHHHHcchh
Confidence            765443333334444433

>KOG3764|consensus

Probab=98.71  E-value=1.2e-08  Score=94.33  Aligned_cols=163  Identities=15%  Similarity=0.181  Sum_probs=118.9

Q ss_pred             CccccccccchhhhcCccCCCC-chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRE-SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLV   79 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~-~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~   79 (308)
                      +|.|...+.|.++++|.+|+++ |++++|+.....++|-.+||.+||++.++.                  +-..+|+++
T Consensus       171 vgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~------------------Gk~aPFlVL  232 (464)
T KOG3764|consen  171 VGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA------------------GKSAPFLVL  232 (464)
T ss_pred             hhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc------------------CCcCcHHHH
Confidence            4778888999999999999774 799999999999999999999999997642                  356789999


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785         80 AVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY  159 (308)
Q Consensus        80 g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~  159 (308)
                      +++.++-+.+-++.-+....+++     +            .   .++  ..+++|++.|-.+....+.......+.-.-
T Consensus       233 ~~v~Lld~~L~l~vi~p~~~~~~-----~------------~---~~~--~~~~~Ll~dP~I~~~agai~~~n~~lafLe  290 (464)
T KOG3764|consen  233 AIVLLLDGALQLLVIEPTEMDPD-----S------------T---EQG--TPMWSLLMDPYILLIAGAITFSNSSLAFLE  290 (464)
T ss_pred             HHHHHHHHHHHHheeCccccCcc-----c------------c---ccC--ccHHHHHhCchHhhhhcchhhccchHHHhC
Confidence            98887776654443221110000     0            0   001  135789999988777776666666666566


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK  204 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~  204 (308)
                      -.+|.+..+++..+.-+.|+.+-...+ .-.+|..+-|.+.||++
T Consensus       291 Ptlslwm~e~m~~p~w~~G~~fLp~~~-~y~ig~~lfg~la~k~~  334 (464)
T KOG3764|consen  291 PTLSLWMLETMFTPGWEVGLAFLPASL-SYAIGTNLFGKLADKYP  334 (464)
T ss_pred             cccHHHHHHhccCCCcceeeeeccccc-chhccCchHHHHHHhcC
Confidence            677788888888555588887644443 34788889999999987

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.67  E-value=3.7e-07  Score=87.16  Aligned_cols=177  Identities=16%  Similarity=0.174  Sum_probs=113.2

Q ss_pred             hhhhcCccC-CCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy11785         11 IPYIDDNVA-NRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVA   89 (308)
Q Consensus        11 ~a~i~d~~~-~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~   89 (308)
                      .+++.|..+ +++|.+..+.-.....+|..+...+.+.+.+.+.+         ++..  .+|.....+.+++.++..+.
T Consensus       125 ~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~---------~~~~--~~~~~~~~v~~iv~~v~~~i  193 (428)
T PF13347_consen  125 NALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG---------GDTS--NGYRWMALVLAIVGLVFFLI  193 (428)
T ss_pred             hhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc---------Cccc--hHHHHHHHHHHHHHHHHhhh
Confidence            567778886 57899999988888888887777777777654321         1111  13555566666665555444


Q ss_pred             HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy11785         90 MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQ  169 (308)
Q Consensus        90 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~  169 (308)
                      .++..|+.+++.++               ++.+.   ++.+.++.++|||.++...+..++.........++.+.|.+..
T Consensus       194 ~~~~~ke~~~~~~~---------------~~~~~---~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~v  255 (428)
T PF13347_consen  194 TFFFVKERSVEVTE---------------QEKKI---SLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYV  255 (428)
T ss_pred             hhheeeeccccccc---------------ccccc---ccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence            43333330000000               00111   2334568899999999888888888888888888999999999


Q ss_pred             hCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHH
Q psy11785        170 FRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVL  220 (308)
Q Consensus       170 ~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~  220 (308)
                      .|.+. ..+.+.... ....+++.++.+++.||++.+  +....+.+...+
T Consensus       256 l~~~~-~~~~~~~~~-~~~~~v~~~~~~~l~~r~gk~--~~~~~~~~~~~~  302 (428)
T PF13347_consen  256 LGNEG-LISIFMLIF-FVASIVGSPLWGRLSKRFGKK--KVYIIGLLLAAL  302 (428)
T ss_pred             hcCch-hhHHHHHHH-HHHHHHHHHHHHHHHHHccce--eehhhhHHHHHH
Confidence            88883 344443333 334577888999999999865  444444444333

>KOG2504|consensus

Probab=98.66  E-value=2.2e-07  Score=90.64  Aligned_cols=200  Identities=16%  Similarity=0.137  Sum_probs=127.8

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      +|-+..+.-+..++..+| +|+|+++.|+..++..+|..+=|.+--++++.|                  +||..+++.+
T Consensus       147 ~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~------------------G~r~~~l~~~  207 (509)
T KOG2504|consen  147 LGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY------------------GWRGALLIFG  207 (509)
T ss_pred             ccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh------------------CcHHHHHHHH
Confidence            355666777777777555 678999999999999999998888888887755                  3666666666


Q ss_pred             HHHHHHHHHHHhccCCCCCC-CC------------c-------cC--CcccccCC----Cc--cccccCCCCCCcch---
Q psy11785         81 VFLMLAAVAMFMFPKTLTKA-SP------------V-------NG--TTTVATLP----TK--KESNQKNPSLKDFP---  129 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~-~~------------~-------~~--~~~~~~~~----~~--~~~~~~~~~~~~~~---  129 (308)
                      .+.+-..+.-+.+++..++. +.            +       +.  .+......    ..  .++.+.+.......   
T Consensus       208 ~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (509)
T KOG2504|consen  208 GISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFL  287 (509)
T ss_pred             HHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhh
Confidence            55444333322222211111 11            0       00  00000000    00  00000000000111   


Q ss_pred             -HHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCcc
Q psy11785        130 -KAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNAR  208 (308)
Q Consensus       130 -~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~  208 (308)
                       ...++++|+|.|+...++..+....++....++|.|.+ .++++..+++.+...+.+ .-++|.++.|++.||...+.+
T Consensus       288 ~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi-~~i~gRi~~G~laD~~~~~~~  365 (509)
T KOG2504|consen  288 SMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGV-SDIIGRIILGLLADKPGIRAL  365 (509)
T ss_pred             hhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHH-hhhhhhhhhhhhcCccccchH
Confidence             11368999999999999999999999999999999999 799999999988776654 457899999999999886655


Q ss_pred             chhHHHHHHHHHH
Q psy11785        209 FVAAWIAITAVLY  221 (308)
Q Consensus       209 ~~~~~~~~~~~~~  221 (308)
                      ..-.++++...++
T Consensus       366 ~~~~~~ll~~gl~  378 (509)
T KOG2504|consen  366 VLFLLTLLIAGLA  378 (509)
T ss_pred             HHHHHHHHHHHHH
Confidence            5545444444443

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=98.66  E-value=4.5e-07  Score=87.92  Aligned_cols=186  Identities=13%  Similarity=0.159  Sum_probs=126.5

Q ss_pred             hhhhcCccCCCCc--------------------------hhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCC
Q psy11785         11 IPYIDDNVANRES--------------------------PLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPS   64 (308)
Q Consensus        11 ~a~i~d~~~~~~~--------------------------~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~   64 (308)
                      .+|+.|..+++++                          ++..+.-.+...+|..+..++.-.+.....+       . .
T Consensus       148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~-------~-~  219 (477)
T PF11700_consen  148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGS-------T-A  219 (477)
T ss_pred             HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------c-c
Confidence            4677777777777                          7887777777777777777766555432110       0 1


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHH
Q psy11785         65 DPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYR  144 (308)
Q Consensus        65 ~~~W~gaWw~~fii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~  144 (308)
                      +..|  +-+..+.+.|+--++.++|++++-++.|+.+..+...           +..+...+++.+.+|++-|+|.....
T Consensus       220 ~~~~--~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~l~~t~k~~~~~~~~~~f  286 (477)
T PF11700_consen  220 SNTW--AIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGS-----------SYLRFGFKRLWRTFKEIRKLRQLFLF  286 (477)
T ss_pred             ccch--hhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcch-----------hHHHHHHHHHHHHHHHHHhChHHHHH
Confidence            1122  2367788888877778888766555544321111000           00011234566778888888988888


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHH
Q psy11785        145 TASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITA  218 (308)
Q Consensus       145 ~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~  218 (308)
                      .++.++..-++..+.++...|..+++|++..+...+.. +.-..+++|.++.|++.||+|.|.++++..+++..
T Consensus       287 Lia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l-~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~  359 (477)
T PF11700_consen  287 LIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGL-VVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW  359 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence            99999999999999999999999999999999655443 33445789999999999999998776665544443

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>KOG2563|consensus

Probab=98.66  E-value=5.2e-07  Score=84.85  Aligned_cols=178  Identities=15%  Similarity=0.159  Sum_probs=109.6

Q ss_pred             cCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHH--HHHHHHHHHHHHHHHHh
Q psy11785         15 DDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLG--LVLVAVFLMLAAVAMFM   92 (308)
Q Consensus        15 ~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~--fii~g~~~ll~~i~~~~   92 (308)
                      .-||+++||+.+..+-.++..+|.++|+++...+...-      +  +.++.    .|-..  |+..+.+..+......+
T Consensus       166 ~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~------~--~~~~~----~~~~~~~f~~~~~l~~l~l~l~~~  233 (480)
T KOG2563|consen  166 AVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS------K--DSEDN----SWLFFTLFLGVECLAALLLALVLF  233 (480)
T ss_pred             HhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC------C--Ccchh----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34899999999999888888899999998888775421      0  11122    24332  44344433333222222


Q ss_pred             ccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCC
Q psy11785         93 FPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRL  172 (308)
Q Consensus        93 ~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gl  172 (308)
                      ..++.|+.+......           +.+   -.++++.++++++|+.|..+.+.......++++..+.+-.-+.-+ |.
T Consensus       234 ~~~~~P~tPps~s~~-----------~~~---~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~s-gY  298 (480)
T KOG2563|consen  234 VFTKKPPTPPSASQA-----------ALQ---DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPS-GY  298 (480)
T ss_pred             hcCCCCCCCCchhHh-----------hhh---cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccc-cC
Confidence            333334333221110           001   125788999999999999998888888888888777665434322 34


Q ss_pred             CcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785        173 PSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY  221 (308)
Q Consensus       173 s~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~  221 (308)
                      +...+|... ...+.+.++|+++.|.+.||.+ +-|...+......+++
T Consensus       299 ~~~~aG~ig-~l~iv~Gmlga~~~gii~Dktk-~fk~~~~v~~~~~~v~  345 (480)
T KOG2563|consen  299 EGVFAGYIG-ALMIVAGMLGALASGIIADKTK-KFKLTTLVLYLFALVG  345 (480)
T ss_pred             CccccchhH-HHHHHHHHHHHHHHHhhhhhhh-hHHHHHHHHHHHHHHH
Confidence            445666654 4445677899999999999976 3455555544444444

>KOG2615|consensus

Probab=98.64  E-value=1.8e-07  Score=86.22  Aligned_cols=174  Identities=16%  Similarity=0.152  Sum_probs=93.4

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHH---HHHHHHH
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGL---VLVAVFL   83 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~f---ii~g~~~   83 (308)
                      ..+..+++.|.+++|+|++.++.+..+..+|-++||++||++.++- +..             |-.|..+   +++....
T Consensus       138 l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~-~~~-------------g~~p~alP~~~v~i~a~  203 (451)
T KOG2615|consen  138 LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFS-SIS-------------GSYPFALPCLLVFILAA  203 (451)
T ss_pred             hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhH-hhh-------------ccCchHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999998731 110             0011111   1111111


Q ss_pred             HHHHHHHHhccCCCCCCCCccCCccc-ccCCCccccccCCCCCCcchHHHHHhhcChHHHH-------HHHHHHHHHHHH
Q psy11785         84 MLAAVAMFMFPKTLTKASPVNGTTTV-ATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMY-------RTASSVLHILPI  155 (308)
Q Consensus        84 ll~~i~~~~~p~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~-------~~l~~~~~~~~~  155 (308)
                      .-+.+..+++||++|.+++.++..+. +..+.    +....+.+..  .--.++||+...-       ..+-.+.....+
T Consensus       204 ~~v~~~~~~lpETL~~rk~~~~~~~~~~~~~~----~~~~~~~~~~--~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~  277 (451)
T KOG2615|consen  204 GDVTFFPWFLPETLPLRKRNDEHSTLQEAADD----RLALLKFARI--FKVAALRNPPLLDFISVLRIFGLHYFLYLELF  277 (451)
T ss_pred             HHHHHHHHhCCccccchhhcccccchhhhhhh----hhhhcchhhh--hhhhhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence            21223446789998765543111110 00000    0000011100  1123344443221       112222333334


Q ss_pred             HHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785        156 AGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK  204 (308)
Q Consensus       156 ~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~  204 (308)
                      -++..+.+++-+..||+++.+.|-++....    +.+.++.+.+.+|..
T Consensus       278 s~~~~t~~~l~~~rfg~ss~~~G~vl~~tG----l~m~~~ql~~~~~l~  322 (451)
T KOG2615|consen  278 SGLENTVLFLTHGRFGYSSMQQGKVLSTTG----LLMLVIQLALVPILP  322 (451)
T ss_pred             HHHHhhHHHhhcCccCCChhhheeeeehhh----HHHHHHHHhcccccc
Confidence            444555555557889999999987664332    344555566655554

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.59  E-value=1.2e-06  Score=81.96  Aligned_cols=187  Identities=16%  Similarity=0.093  Sum_probs=111.7

Q ss_pred             cccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785          5 AVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM   84 (308)
Q Consensus         5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l   84 (308)
                      ...+...+++.|..++|+|++..++++.+..+|-+++-++.|.+++-|..           .|   -++. +-..+++.+
T Consensus       105 ~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~-----------~r---L~~v-~~~~a~i~~  169 (403)
T PF03209_consen  105 ASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP-----------ER---LIQV-IQGVALIAL  169 (403)
T ss_pred             HhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH-----------HH---HHHH-HHHHHHHHH
Confidence            34566788999999999999999999999999999999999988875421           11   1222 222222222


Q ss_pred             HHHH-HHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHH
Q psy11785         85 LAAV-AMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLP  163 (308)
Q Consensus        85 l~~i-~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P  163 (308)
                      ++.+ .++...   ++..+....          + +   ++..++...++++..||.-....+..+.....++.=-..+-
T Consensus       170 ~l~~ia~wg~E---~r~~~~~~~----------~-~---~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLE  232 (403)
T PF03209_consen  170 LLNLIALWGQE---PRRSRRAAA----------A-E---RPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILE  232 (403)
T ss_pred             HHHHHHHHhcc---cCCcccccC----------C-C---CCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcC
Confidence            2222 222211   111111100          0 0   00113556778888888654444433333333333333444


Q ss_pred             HHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHH
Q psy11785        164 KYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGM  225 (308)
Q Consensus       164 ~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~  225 (308)
                      -|=-+.||+|.++..-+.+... .+..+|..+.|++..| +.+.++..++++...++++.+.
T Consensus       233 Pygg~Vfgmsv~eTT~Lta~~~-~G~L~G~~~~g~~l~~-~~~~~~~a~~G~~~~~~~f~li  292 (403)
T PF03209_consen  233 PYGGEVFGMSVGETTRLTAFWG-GGTLLGMLLAGFLLSR-RLGKKRTAALGCLLGALAFALI  292 (403)
T ss_pred             CchhHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHhcC-CCCchHHHHHHHHHHHHHHHHH
Confidence            4556799999999887766543 4668888888887775 3345567777777776665543

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>TIGR00889 2A0110 nucleoside transporter

Probab=98.50  E-value=1e-06  Score=84.10  Aligned_cols=83  Identities=16%  Similarity=0.064  Sum_probs=55.3

Q ss_pred             HHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCc--------ccccccchhhhhhhhHHHhhhhheehhhc
Q psy11785        132 VKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPS--------HTANMVSGVGGILVMGIGIILSGVFILKF  203 (308)
Q Consensus       132 ~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~--------~~agl~~g~~~i~~~~iG~~lgG~l~~r~  203 (308)
                      .++++|||.++...+..++..........++|.|+++ .|.++        +..+++.+...+ +.+++.++.|++.||+
T Consensus       201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i-~~i~~~~~~g~l~dr~  278 (418)
T TIGR00889       201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQF-SEIFFILTIPFFLKRF  278 (418)
T ss_pred             HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            4578899998877777777666666677888999875 45444        444655544333 3466778899999999


Q ss_pred             cCCccchhHHHHHHH
Q psy11785        204 KPNARFVAAWIAITA  218 (308)
Q Consensus       204 ~~~~~~~~~~~~~~~  218 (308)
                      +.|  +.+..+.+..
T Consensus       279 g~r--~~l~~~~~~~  291 (418)
T TIGR00889       279 GIK--KVMLLSLVAW  291 (418)
T ss_pred             CcH--HHHHHHHHHH
Confidence            754  4444444333

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK09848 glucuronide transporter; Provisional

Probab=98.43  E-value=1.1e-06  Score=84.38  Aligned_cols=86  Identities=8%  Similarity=-0.025  Sum_probs=63.9

Q ss_pred             chHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        128 FPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       128 ~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      +...++.++|||.++...+..++.......+.+..|.|+++.+|.++...++... ....+.+++.++.+++.||++.+ 
T Consensus       217 ~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~r~g~~-  294 (448)
T PRK09848        217 LKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLV-QNLVGTVASAPLVPGMVARIGKK-  294 (448)
T ss_pred             HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCcH-
Confidence            4456788999999999888888888888888888999999999987766554332 22234567788899999998754 


Q ss_pred             cchhHHHHH
Q psy11785        208 RFVAAWIAI  216 (308)
Q Consensus       208 ~~~~~~~~~  216 (308)
                       +...++.+
T Consensus       295 -~~~~~g~~  302 (448)
T PRK09848        295 -NTFLIGAL  302 (448)
T ss_pred             -HHHHHHHH
Confidence             44444433

>cd01327 KAZAL_PSTI Kazal-type pancreatic secretory trypsin inhibitors (PSTI) and related proteins, including the second domain of the ovomucoid turkey inhibitor and the C-terminal domain of the esophagus cancer-related gene-2 protein (ECRG-2), are members of the superfamily of kazal-type proteinase inhibitors and follistatin-like proteins

Probab=98.42  E-value=1.4e-07  Score=60.64  Aligned_cols=28  Identities=36%  Similarity=0.955  Sum_probs=24.1

Q ss_pred             ccCCCCCcceeeCCCCceecCccccccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHAGCQNI  289 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~  289 (308)
                      ..|+ ..|+||||+||+||.|+|+. |.+.
T Consensus         3 ~~Cp-~~~~PVCGsDg~TY~N~C~l-~~~~   30 (45)
T cd01327           3 FGCP-KDYDPVCGTDGVTYSNECLL-CAEN   30 (45)
T ss_pred             CCCC-CCCCceeCCCCCEeCCHhHH-HHHH
Confidence            5686 56999999999999999999 7654

>PRK09669 putative symporter YagG; Provisional

Probab=98.38  E-value=3.5e-06  Score=80.80  Aligned_cols=162  Identities=12%  Similarity=0.105  Sum_probs=91.9

Q ss_pred             hhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy11785         12 PYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAM   90 (308)
Q Consensus        12 a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~   90 (308)
                      ++..|+. +++||.+..++-.....+|..+++.++..+...+.+         .+.+  .+|+..+.+.+++.++..+..
T Consensus       132 al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~---------~~~~--~g~~~~~~i~~ii~~v~~~~~  200 (444)
T PRK09669        132 AMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK---------GDEQ--KGYFYAMMVMGLLGVVLFFCC  200 (444)
T ss_pred             HhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------Cchh--hhHHHHHHHHHHHHHHHHHHH
Confidence            4566666 457899888888878888888877766655543211         1111  247777777776655544333


Q ss_pred             HhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Q psy11785         91 FMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQF  170 (308)
Q Consensus        91 ~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~  170 (308)
                      ++..|+.++.+  +            +   .   .++..+.++.++|||.++...+..++............+.|.+...
T Consensus       201 ~~~~~e~~~~~--~------------~---~---~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~  260 (444)
T PRK09669        201 FFMTKERYTPE--V------------D---N---SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVL  260 (444)
T ss_pred             hCCeEEecCCC--C------------c---C---CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeec
Confidence            32222211000  0            0   0   0134566788999999988777666555555444454554444333


Q ss_pred             CCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        171 RLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       171 gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +. +...+.+.. ......+++.++.+++.||++.+
T Consensus       261 ~~-~~~~~~~~~-~~~i~~ii~~~~~~~l~~r~gk~  294 (444)
T PRK09669        261 LR-PDLATLFLV-TGMIAGLFGALLSERLLGKFDRV  294 (444)
T ss_pred             CC-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhChH
Confidence            32 222222222 22334567888899999999754

>PRK11462 putative transporter; Provisional

Probab=98.37  E-value=9e-06  Score=78.62  Aligned_cols=153  Identities=12%  Similarity=0.014  Sum_probs=86.6

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy11785         20 NRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTK   99 (308)
Q Consensus        20 ~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p~~~p~   99 (308)
                      ++||++..++-.....+|..+++++...+.+.+.+         ++  ...+|.....+.+++.++..+..+...|+.++
T Consensus       141 ~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~---------~~--~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~  209 (460)
T PRK11462        141 PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG---------DN--KPLGFQGGIAVLSVVAFMMLAFCFFTTKERVE  209 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------Cc--hhhhHHHHHHHHHHHHHHHHHHHHhcceeccC
Confidence            78999999999988888888888887666553311         11  11246666666666555444333332222111


Q ss_pred             CCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccc
Q psy11785        100 ASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANM  179 (308)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl  179 (308)
                      .+     .             .+.   ++.+.++.+++||.++......++.........+....|.+-.++... ..+.
T Consensus       210 ~~-----~-------------~~~---~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~  267 (460)
T PRK11462        210 AP-----P-------------TTT---SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVA  267 (460)
T ss_pred             CC-----c-------------cCC---CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHH
Confidence            00     0             001   245567889999998766655554444433333333333333344432 2233


Q ss_pred             cchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        180 VSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       180 ~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +.... ..+.++|.++++++.||++.|
T Consensus       268 ~l~~~-~i~~iig~~l~~~l~~r~gkk  293 (460)
T PRK11462        268 FLTTY-CVGNLIGSALAKPLTDWKCKV  293 (460)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHhChH
Confidence            32222 234577888999999998754

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=98.37  E-value=1.1e-05  Score=78.40  Aligned_cols=79  Identities=14%  Similarity=0.166  Sum_probs=60.1

Q ss_pred             CccccccccchhhhcCccCCCC---chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRE---SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLV   77 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~---~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fi   77 (308)
                      +|.+...|...+++.|++|+++   |+.+.++++.+..+|.++||++++++.+.+                  +|+..|.
T Consensus       114 ~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~------------------g~~~~f~  175 (475)
T TIGR00924       114 VGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY------------------GYHVGFN  175 (475)
T ss_pred             hccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc------------------ChHHHHH
Confidence            3567778888999999998765   888999999999999999999999987643                  3778888


Q ss_pred             HHHHHHHHHHHHHHhccCCC
Q psy11785         78 LVAVFLMLAAVAMFMFPKTL   97 (308)
Q Consensus        78 i~g~~~ll~~i~~~~~p~~~   97 (308)
                      +.++..++..+.++..++..
T Consensus       176 ~~~~~~~~~~l~~~~~~~~~  195 (475)
T TIGR00924       176 LAAVGMVIGLLTFFAGRHML  195 (475)
T ss_pred             HHHHHHHHHHHHHHHccccc
Confidence            87755544444444444443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.28  E-value=9e-06  Score=78.79  Aligned_cols=168  Identities=10%  Similarity=0.037  Sum_probs=92.4

Q ss_pred             hhhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy11785         11 IPYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVA   89 (308)
Q Consensus        11 ~a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~   89 (308)
                      .++++|.. .++||.+..++-.....+|..+++.++..+++.+.+         .+ +.. +|.....+.+++.++..+.
T Consensus       128 ~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~---------~~-~~~-g~~~~~~i~~~~~~~~~~~  196 (473)
T PRK10429        128 WSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG---------GD-RGF-GFQMFTLVLIAFFIVSTII  196 (473)
T ss_pred             HhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------Cc-hhh-hHHHHHHHHHHHHHHHHHH
Confidence            35667877 588999988875555566655555444433332210         01 111 3555555555554443333


Q ss_pred             HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy11785         90 MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQ  169 (308)
Q Consensus        90 ~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~  169 (308)
                      .+..-|+.+..+..+.          .  ++.+   .++.+.++.+++||.++...+..++.........++.+.|++..
T Consensus       197 ~~~~~~e~~~~~~~~~----------~--~~~~---~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~  261 (473)
T PRK10429        197 TLRNVHEVYSSDNQVS----------A--EGSH---LTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV  261 (473)
T ss_pred             HHcCceecCCcccccc----------c--cccC---CCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE
Confidence            2222222111100000          0  0001   13445567788999998888877777777777777777666654


Q ss_pred             hCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        170 FRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       170 ~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .+ +....+++..... ...+++.++.+++.||++.|
T Consensus       262 ~~-~~~~~~~~~~~~~-i~~ii~~~~~~~l~~r~gkk  296 (473)
T PRK10429        262 IG-DADLFPYYLSYAG-AANLVTLILFPRLVKSLSRR  296 (473)
T ss_pred             CC-CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCcH
Confidence            44 4444444443322 34567788889999999865

>KOG0569|consensus

Probab=98.26  E-value=3.7e-06  Score=81.03  Aligned_cols=185  Identities=15%  Similarity=0.111  Sum_probs=102.1

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLA   86 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~   86 (308)
                      ..+..-|+.|..|++.||..-.....+..+|-.+|..+|.--+  ..         . +.    .|+..+.+..+.+++.
T Consensus       134 ~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i--lG---------t-~~----~W~~l~~~~~i~~~~~  197 (485)
T KOG0569|consen  134 TGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSL--LG---------T-ED----LWPYLLAFPLIPALLQ  197 (485)
T ss_pred             HHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHh--cC---------C-Cc----chHHHHHHHHHHHHHH
Confidence            3455678999999999999877778888888888776664321  11         1 11    2666676666666666


Q ss_pred             HHHHHhccCCCCC---CCCccC--Cccccc----C--CCccc----cccCCCCCCcchHHHHHhhcChHH-----HHHHH
Q psy11785         87 AVAMFMFPKTLTK---ASPVNG--TTTVAT----L--PTKKE----SNQKNPSLKDFPKAVKRLLKNDIL-----MYRTA  146 (308)
Q Consensus        87 ~i~~~~~p~~~p~---~~~~~~--~~~~~~----~--~~~~~----~~~~~~~~~~~~~~~~~Ll~n~~f-----~~~~l  146 (308)
                      .+.+.++||+.+=   .+.+++  +++.+.    .  ++..+    +.+.++..++....++++++||..     +..++
T Consensus       198 l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v  277 (485)
T KOG0569|consen  198 LALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVV  277 (485)
T ss_pred             HHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHH
Confidence            6667778876331   011111  000000    0  00000    000000011112235677777543     33333


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccc
Q psy11785        147 SSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARF  209 (308)
Q Consensus       147 ~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~  209 (308)
                      ...-...+.++...+.-.+++ .-|++..++-.....+.+ ...+.++++.+++||+|+|+.-
T Consensus       278 ~~~qq~sGi~ai~~Yst~i~~-~aG~~~~~a~~an~~~g~-v~~~~t~~~~~lid~~gRRpLl  338 (485)
T KOG0569|consen  278 SFAQQFSGINAIFFYSTSIFK-TAGFTPEEAQYANLGIGI-VNLLSTLVSPFLIDRLGRRPLL  338 (485)
T ss_pred             HHHHHhcCcceeHHHHHHHHH-HcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCcHHH
Confidence            334444455555555555555 568888876654433322 2356788999999999987544

>TIGR00806 rfc RFC reduced folate carrier

Probab=98.23  E-value=1.7e-05  Score=76.19  Aligned_cols=48  Identities=21%  Similarity=0.116  Sum_probs=43.9

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCT   49 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll   49 (308)
                      +++|+.+ ...++|..++|+++|+++.|++.++..+|.++|+++++++.
T Consensus       127 vaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~  174 (511)
T TIGR00806       127 VTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV  174 (511)
T ss_pred             HHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3577787 88999999999999999999999999999999999999944

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>KOG0254|consensus

Probab=98.18  E-value=4.3e-06  Score=81.91  Aligned_cols=198  Identities=13%  Similarity=0.165  Sum_probs=111.6

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+....+...|++|..|++.|+...+.......+|..+|+++|...-+.              + |  .||..+.+..+
T Consensus       155 g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~--------------~-~--~Wr~~~~~~~i  217 (513)
T KOG0254|consen  155 GVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV--------------Y-A--GWRIPLGLALI  217 (513)
T ss_pred             chhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC--------------C-c--cHHHHHHHHHH
Confidence            55566677889999999999999999999999999999997777655321              1 1  47877777777


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCc-c----cccC-C--Cccccc-----------cCCCCCCcchHHHHHh----hcC
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTT-T----VATL-P--TKKESN-----------QKNPSLKDFPKAVKRL----LKN  138 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~-~----~~~~-~--~~~~~~-----------~~~~~~~~~~~~~~~L----l~n  138 (308)
                      ..++..+.+++.||+ |+...++.+. +    ...+ .  +.+.+.           +.....++.  ..+.+    .++
T Consensus       218 ~~~~~~~~~~~~pes-p~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~  294 (513)
T KOG0254|consen  218 PAVILALGMLFLPES-PRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKA--SWGELFSPKVRK  294 (513)
T ss_pred             HHHHHHHHHHhCCCC-hHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccc--cHHHhcCcchHH
Confidence            777777666666654 3211111000 0    0000 0  000000           000000000  11222    223


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCc-ccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHH
Q psy11785        139 DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPS-HTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT  217 (308)
Q Consensus       139 ~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~-~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~  217 (308)
                      +.++...+..+-...+......+.+.++++.-.-+. ....++.+.    ..+++.+++.+++||+|+|  ..+.++.+.
T Consensus       295 ~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~----v~~~~t~~~~~lvd~~gRr--~lll~s~~~  368 (513)
T KOG0254|consen  295 RLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGV----VNFLGTLVATYLVDRFGRR--KLLLFGAAG  368 (513)
T ss_pred             HHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHH----HHHHHHHHHHHHHHHhccH--HHHHHhHHH
Confidence            344445555555555666677778888776433323 223333332    2356677779999999765  555555555


Q ss_pred             HHHHHHHH
Q psy11785        218 AVLYALGM  225 (308)
Q Consensus       218 ~~~~~~~~  225 (308)
                      ..++.+..
T Consensus       369 m~~~~~~~  376 (513)
T KOG0254|consen  369 MSICLVIL  376 (513)
T ss_pred             HHHHHHHH
Confidence            55555433

>PF07648 Kazal_2: Kazal-type serine protease inhibitor domain; InterPro: IPR011497 This domain is usually indicative of serine protease inhibitors that belong to Merops inhibitor families: I1, I2, I17 and I31

Probab=98.18  E-value=4.3e-07  Score=57.45  Aligned_cols=30  Identities=37%  Similarity=0.935  Sum_probs=24.0

Q ss_pred             CCCCCcceeeCCCCceecCccccccccccc
Q psy11785        262 CDHSKFNPICGGDGRTYFSACHAGCQNISS  291 (308)
Q Consensus       262 C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~  291 (308)
                      |+...++||||+||+||.|+|++.+..-..
T Consensus         1 C~~~~~~PVCg~dg~ty~n~C~l~~~~c~~   30 (42)
T PF07648_consen    1 CPREYSSPVCGSDGKTYSNECELRCANCRT   30 (42)
T ss_dssp             EESSSSSTEEETTSEEESSHHHHHHHHHHH
T ss_pred             CcCCCCCCEEcCCCCEEhhHHHHHHHHHhc
Confidence            554445599999999999999999975544

However, kazal-like domains are also seen in the extracellular part of agrins, which are not known to be protease inhibitors. Kazal domains often occur in tandem arrays and have a central alpha-helix, a short two-stranded antiparallel beta-sheet and several disulphide bonds [, , ]. The amino terminal segment of this domain binds to the active site of its target proteases, thus inhibiting their function.; PDB: 2KMP_A 1LDT_L 2KMR_A 2KMO_A 2KMQ_A 1AN1_I 4E0S_B 3T5O_A 4A5W_B 1LR7_A ....

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.09  E-value=9.4e-05  Score=71.71  Aligned_cols=156  Identities=8%  Similarity=0.044  Sum_probs=88.3

Q ss_pred             cccchhhhcCccCCCCc--hhHHHHHHHHHHHHHHHHHHHHHhhhcc-cccCCCC--CCCCCCCCchhHHHHHHHHHHHH
Q psy11785          7 YTLGIPYIDDNVANRES--PLYFAITIGVRILGPSLGFILGSFCTRL-YVDLSIP--SDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~--~~~~gi~~~~~~~Gp~lG~~lGg~ll~~-~v~~~~~--~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      ++...+++.|.+|+++|  +++.++...+..+|.++|+.+|++.... +..+...  ....+.      .-+..|++.++
T Consensus       132 ~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~F~i~a~  205 (477)
T TIGR01301       132 QGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCA------NLKSCFLIDII  205 (477)
T ss_pred             HHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccc------hHHHHHHHHHH
Confidence            34457899999998865  6899999999999999999999975211 1010000  001111      13566887777


Q ss_pred             HHHHHHHHHH-hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy11785         82 FLMLAAVAMF-MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT  160 (308)
Q Consensus        82 ~~ll~~i~~~-~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~  160 (308)
                      ..++..+... ..+|+.+..+++..+++   .++ .++.+.+...+++.+.++++  -|.++..++.+++..++++.+..
T Consensus       206 ~l~i~~l~t~~~v~E~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~  279 (477)
T TIGR01301       206 LLAILTYIALSAVKENPLIGSDDFINSE---AAP-PSKHGEEAFFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFIL  279 (477)
T ss_pred             HHHHHHHHHeeeeeccCCCccccchhhh---ccc-ccccchhhhHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666555443 34443322211110000   000 00000111122222223222  34667788889999999999999


Q ss_pred             HHHHHHH-HHhCCCc
Q psy11785        161 FLPKYFE-TQFRLPS  174 (308)
Q Consensus       161 ~~P~yl~-~~~gls~  174 (308)
                      +...|+- +.|+-++
T Consensus       280 y~T~~vg~~v~~~~~  294 (477)
T TIGR01301       280 FDTDWMGREVYGGSV  294 (477)
T ss_pred             hccHHHHHHHcCCCC
Confidence            9999886 5777554

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.05  E-value=6e-05  Score=72.28  Aligned_cols=179  Identities=14%  Similarity=0.078  Sum_probs=111.1

Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH-hccCCCC
Q psy11785         20 NRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMF-MFPKTLT   98 (308)
Q Consensus        20 ~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~-~~p~~~p   98 (308)
                      ++||.+..+.-.....+|..+-.++-..+.+.+.         ++|..+  +|+..-.+.++++++..+.-+ -.+|+..
T Consensus       144 ~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g---------~~~~~~--g~~~~~~~~~vi~~i~~l~~~~~v~ER~~  212 (467)
T COG2211         144 PQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG---------GGDKAL--GYQGTALVLGVIGVILLLFCFFNVKERVV  212 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------CCcchh--hHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            6889998888888888886666666666666542         222222  467666666665544433222 2222211


Q ss_pred             CCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccccc
Q psy11785         99 KASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTAN  178 (308)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~ag  178 (308)
                      +..+.             + +..   .+++...+..+++|+.+....+...+...+..-..+.+..|.+-..|.+...+.
T Consensus       213 ~~~~~-------------~-~~~---~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~  275 (467)
T COG2211         213 ETQPT-------------K-TGV---KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAY  275 (467)
T ss_pred             ccccC-------------c-ccc---cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHH
Confidence            11000             0 001   113334556789999999999988888888888889999999888888877776


Q ss_pred             ccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHHhHHHhcC
Q psy11785        179 MVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGMGILTFIG  232 (308)
Q Consensus       179 l~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (308)
                      +.+.. ..++.+++.++..++.+|+|.+  +...++.+..+++.   +.+++.+
T Consensus       276 ~~~~~-~~~~~l~~~~~~p~L~~~~gkk--~~~~~~~~~~~i~~---~~~~f~~  323 (467)
T COG2211         276 LLLLA-SGAGLLIGLILWPRLVKKFGKK--KLFLIGLLLLAVGY---LLLYFTP  323 (467)
T ss_pred             HHHHH-HHHHHHHHHHhHHHHHHHhchH--HHHHHHHHHHHHHH---HHHHhhc
Confidence            55432 2345566788899999999854  55555544444433   3344455

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=98.04  E-value=4.2e-08  Score=93.90  Aligned_cols=80  Identities=21%  Similarity=0.423  Sum_probs=57.5

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++....|+.|..|+++|++..++......+|..++.+++-.+.. +.           + .|  .||..+.+..+
T Consensus       115 ~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~-----------~-~~--~Wr~~~~~~~~  179 (451)
T PF00083_consen  115 GIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY-YS-----------D-NW--GWRILLIFGAI  179 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc-cc-----------c-cc--ccccccccccc
Confidence            5567788999999999999999999999999888888888877654422 11           0 11  36776666666


Q ss_pred             HHHHHHHHHHhccCC
Q psy11785         82 FLMLAAVAMFMFPKT   96 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~   96 (308)
                      ..++..+..+++||+
T Consensus       180 ~~l~~~~~~~~~pES  194 (451)
T PF00083_consen  180 PSLLVLLLRFFLPES  194 (451)
T ss_pred             ccccccccccccccc
Confidence            655554555566665

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=98.04  E-value=7.8e-05  Score=72.89  Aligned_cols=66  Identities=11%  Similarity=0.178  Sum_probs=51.5

Q ss_pred             ccccccccchhhhcCccCCCC--chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRE--SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLV   79 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~--~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~   79 (308)
                      |.+...|...+++.|.+|+++  +..++++++++..+|.++||+++|++.+.+                  +||..|.+.
T Consensus       125 g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~------------------g~~~~F~i~  186 (500)
T PRK09584        125 GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY------------------GWSVAFALS  186 (500)
T ss_pred             hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh------------------CHHHHHHHH
Confidence            556677888899999998654  456789999999999999999999987643                  377888876


Q ss_pred             HHHHHH
Q psy11785         80 AVFLML   85 (308)
Q Consensus        80 g~~~ll   85 (308)
                      ++..++
T Consensus       187 ~i~~~i  192 (500)
T PRK09584        187 VVGMLI  192 (500)
T ss_pred             HHHHHH
Confidence            654443

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=97.96  E-value=5.1e-05  Score=71.21  Aligned_cols=180  Identities=14%  Similarity=0.136  Sum_probs=119.2

Q ss_pred             chhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc--ccCCCC-CCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785         10 GIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLY--VDLSIP-SDITPSDPRWIGAWWLGLVLVAVFLMLA   86 (308)
Q Consensus        10 g~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~--v~~~~~-~~~~~~~~~W~gaWw~~fii~g~~~ll~   86 (308)
                      --+++.|..++++-++.-+.-.....+|..+-.++.-.....+  ..++.. -.++|+|..-   =++.+.+.++--++.
T Consensus       136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~---~ri~~~l~A~W~li~  212 (438)
T COG2270         136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED---VRITGLLAALWWLLF  212 (438)
T ss_pred             hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc---chhHHHHHHHHHHHH
Confidence            3578888999988888877766677777666665542111111  000000 1123333321   256677777777777


Q ss_pred             HHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q psy11785         87 AVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYF  166 (308)
Q Consensus        87 ~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl  166 (308)
                      ++|++..-++.++.....             .+......|++...++++.+++.++...++.++..=++.+..++.-.|-
T Consensus       213 ~iPm~~~v~~~~~~~~~~-------------~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg  279 (438)
T COG2270         213 ALPMILNVHDAEKISSPP-------------PTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFG  279 (438)
T ss_pred             HhHHHhcccccccccccc-------------hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            888876655544321000             0001123456777888999999888888898888888999999999999


Q ss_pred             HHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        167 ETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       167 ~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ...+|++..+..++..... ..+++|.+++|++.+|++.|
T Consensus       280 ~~~~gls~~~lll~g~~~~-vvA~lg~ii~g~Ld~rfg~k  318 (438)
T COG2270         280 AADLGLSSTELLLIGIALS-VVAALGAIIAGFLDERFGSK  318 (438)
T ss_pred             HHHcCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCc
Confidence            9999999999877654444 35688999999999999987

>KOG2816|consensus

Probab=97.93  E-value=2.1e-05  Score=75.89  Aligned_cols=193  Identities=16%  Similarity=0.235  Sum_probs=112.4

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL   83 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~   83 (308)
                      +.++..+.+|++|..+.++|...+|++......+-++||.+|+.+.+.+.                  --..|.+..+..
T Consensus       127 ~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~------------------~a~~f~ia~~~~  188 (463)
T KOG2816|consen  127 SAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG------------------IALVFLIAAASG  188 (463)
T ss_pred             hhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC------------------chHHHHHHHHHH
Confidence            45667789999999999999999999999999999999999999987642                  123455555444


Q ss_pred             HHHH-HHHHhccCCCCCCCCccC-CcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHH-HHHHh
Q psy11785         84 MLAA-VAMFMFPKTLTKASPVNG-TTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPI-AGLYT  160 (308)
Q Consensus        84 ll~~-i~~~~~p~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~-~~~~~  160 (308)
                      ++.. ..++++||++.++++... .++  .... ..   ......+..+.....=..|..+...+...+....- .+..-
T Consensus       189 ~~~~~y~~~~l~Esl~~~~~~~~~~~~--~~~~-~~---~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~  262 (463)
T KOG2816|consen  189 ILSLLYMLLFLPESLQEKERSDATLRE--LTPG-SL---DSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASD  262 (463)
T ss_pred             HHHHHHHhhccccccCccccccccccc--cCCC-cc---cchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCcee
Confidence            4333 345667777665443210 000  0000 00   00011122222222222344444444333332222 22231


Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhh-heehhhccCCccchhHHHHHHHHHHHH
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILS-GVFILKFKPNARFVAAWIAITAVLYAL  223 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lg-G~l~~r~~~~~~~~~~~~~~~~~~~~~  223 (308)
                      .++.|+...|+++..+.+.+.+...+.. .+++++. ..+.++++.+.  .+.+++....+...
T Consensus       263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~-~i~~l~~~~~l~~~l~~~~--~i~lGl~~~~~~~~  323 (463)
T KOG2816|consen  263 VLLLYLKAKFGWNKKEFSDLLSLVSILG-IISQLLLLPLLSSILGEKR--LISLGLLSEFLQLL  323 (463)
T ss_pred             EEEEEEeeecCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh--HhhHHHHHHHHHHH
Confidence            4477888899999999997776666654 4455554 47777777653  55555555544433

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=97.90  E-value=0.00011  Score=72.80  Aligned_cols=72  Identities=15%  Similarity=0.180  Sum_probs=52.1

Q ss_pred             HHHhhcC-hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcc---cccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785        132 VKRLLKN-DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSH---TANMVSGVGGILVMGIGIILSGVFILKFK  204 (308)
Q Consensus       132 ~~~Ll~n-~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~---~agl~~g~~~i~~~~iG~~lgG~l~~r~~  204 (308)
                      ..+|+|+ +.|....+..++..+.+++...+.|......|+-++.   ..+++..... .+.++|.++.|.+++|++
T Consensus       302 P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~-fg~~~g~~i~g~l~~~ir  377 (599)
T PF06609_consen  302 PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVG-FGSCAGAVILGLLFSKIR  377 (599)
T ss_pred             CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHH-HHHHHHHHHHHHHHHHcc
Confidence            4689998 5677766777778888899999999999999988764   4454433332 245667777788888775

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PF00050 Kazal_1: Kazal-type serine protease inhibitor domain; InterPro: IPR002350 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively

Probab=97.89  E-value=2.7e-06  Score=55.52  Aligned_cols=26  Identities=38%  Similarity=1.087  Sum_probs=21.5

Q ss_pred             CCCCCcceeeCCCCceecCccccccccc
Q psy11785        262 CDHSKFNPICGGDGRTYFSACHAGCQNI  289 (308)
Q Consensus       262 C~~~~~~PvC~~~g~ty~SpC~AGC~~~  289 (308)
                      |+ ..|+||||+||+||-+.|+- |...
T Consensus         8 C~-~~~~PVCGsdg~TY~N~C~l-C~~~   33 (48)
T PF00050_consen    8 CP-REYDPVCGSDGVTYSNECEL-CAAN   33 (48)
T ss_dssp             EE-SSCS-EEETTSEEESSHHHH-HHHH
T ss_pred             CC-CCCCceECCCCCCccccchh-hhhh
Confidence            65 67999999999999999999 9433

In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. This family of Kazal inhibitors, belongs to MEROPS inhibitor family I1, clan IA. They inhibit serine peptidases of the S1 family (IPR001254 from INTERPRO) []. The members are primarily metazoan, but includes exceptions in the alveolata (apicomplexa), stramenopiles, higher plants and bacteria. Kazal inhibitors, which inhibit a number of serine proteases (such as trypsin and elastase), belong to family of proteins that includes pancreatic secretory trypsin inhibitor; avian ovomucoid; acrosin inhibitor; and elastase inhibitor. These proteins contain between 1 and 7 Kazal-type inhibitor repeats [, ]. The structure of the Kazal repeat includes a large quantity of extended chain, 2 short alpha-helices and a 3-stranded anti-parallel beta sheet [].The inhibitor makes 11 contacts with its enzyme substrate: unusually, 8 of these important residues are hypervariable []. Altering the enzyme-contact residues, and especially that of the active site bond, affects the the strength of inhibition and specificity of the inhibitor for particular serine proteases [, ]. The presence of this Pfam domain is usually indicative of serine protease inhibitors, however, Kazal-like domains are also seen in the extracellular part of agrins which are not known to be proteinase inhibitors.; GO: 0005515 protein binding; PDB: 1HPT_A 1CGI_I 1CGJ_I 2P6A_D 3HH2_C 2B0U_D 2BUS_A 1BUS_A 1OVO_A 3OVO_A ....

>smart00280 KAZAL Kazal type serine protease inhibitors

Probab=97.87  E-value=6.2e-06  Score=53.29  Aligned_cols=25  Identities=40%  Similarity=1.030  Sum_probs=21.2

Q ss_pred             CCCCCcceeeCCCCceecCccccccc
Q psy11785        262 CDHSKFNPICGGDGRTYFSACHAGCQ  287 (308)
Q Consensus       262 C~~~~~~PvC~~~g~ty~SpC~AGC~  287 (308)
                      |+ ..|+||||+||.||-|.|+--+.
T Consensus         6 C~-~~~~pVCgsdg~TY~N~C~l~~~   30 (46)
T smart00280        6 CP-REYDPVCGSDGVTYSNECHLCKA   30 (46)
T ss_pred             CC-CCCCccCCCCCCEeCCHhHHHHH
Confidence            65 46999999999999999997544

Kazal type serine protease inhibitors and follistatin-like domains.

>TIGR00788 fbt folate/biopterin transporter

Probab=97.87  E-value=1.2e-05  Score=78.06  Aligned_cols=187  Identities=12%  Similarity=-0.001  Sum_probs=95.2

Q ss_pred             ccchhhhcCccCCCCchh---HHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785          8 TLGIPYIDDNVANRESPL---YFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM   84 (308)
Q Consensus         8 ~lg~a~i~d~~~~~~~~~---~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l   84 (308)
                      +.+-+++.|..+ +++..   ..+..+....+|.++|+.++|++.+.+                  .|+..|.+.+++.+
T Consensus       139 v~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~------------------~~~~~f~~~a~l~l  199 (468)
T TIGR00788       139 VLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT------------------LTRILFLITAALLL  199 (468)
T ss_pred             HhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc------------------CcchHHHHHHHHHH
Confidence            345566777776 43333   444555666789999999999887643                  27777888777766


Q ss_pred             HHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHH
Q psy11785         85 LAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPK  164 (308)
Q Consensus        85 l~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~  164 (308)
                      +..+..++++|+.+....+..+++.  ..............++..+..++.+++|..+...+..++.+....+....+-.
T Consensus       200 l~~~~~~~~~E~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~  277 (468)
T TIGR00788       200 LQLFVSNLSKERRAFVRPRIGTYLE--MNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFC  277 (468)
T ss_pred             HHHHHHHhcccccccccccccccch--hhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE
Confidence            6655556666642111100000000  00000000000001122334566788887765444333311111111111111


Q ss_pred             HHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHH
Q psy11785        165 YFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITA  218 (308)
Q Consensus       165 yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~  218 (308)
                      +.++..|+++.+.|++.+... .+.++|..+.+++.+|++.  ++++.++.+..
T Consensus       278 ~~~~~lG~s~~~~G~~~~~~~-v~~i~g~~~~~~~~~~~~~--r~~l~~~~~l~  328 (468)
T TIGR00788       278 ATTQCLPGGPSFSGMSKVVGN-LGSLCGVGGYDRFLKTFPY--RLLFGVTTLLY  328 (468)
T ss_pred             EEcccCCCCcchhhhHHHHHH-HHHHHHHHHHHHHHhhCCH--HHHHHHHHHHH
Confidence            344578999999998876544 3445666666666666553  34444433333

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>KOG0252|consensus

Probab=97.80  E-value=3.9e-05  Score=72.68  Aligned_cols=204  Identities=13%  Similarity=0.163  Sum_probs=118.0

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      +|-++-||++.++..|...++.|+..++.+.++..+|...|.+++-.+...|...-..+ .++.+.+  +.||+.|.+..
T Consensus       156 iGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~-~~~~~ld--~vWRl~~glg~  232 (538)
T KOG0252|consen  156 IGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGP-STYPHLD--GVWRIIFGLGA  232 (538)
T ss_pred             ccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCC-CCchHHH--HHHHHHHHHHH
Confidence            57788999999999999999999999999999999999998888887776554321111 1122223  56999876654


Q ss_pred             HHHHHHHHHHHhccCCCCCCCCccC----C---------ccc-ccCCCccc-cc---cCCCCCCcchHHHHHhhcChHHH
Q psy11785         81 VFLMLAAVAMFMFPKTLTKASPVNG----T---------TTV-ATLPTKKE-SN---QKNPSLKDFPKAVKRLLKNDILM  142 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p~~~~~~~----~---------~~~-~~~~~~~~-~~---~~~~~~~~~~~~~~~Ll~n~~f~  142 (308)
                      +..++    .+.++-.+|++++...    +         +.. ..+.+++. +.   ..+.+.+.+.+-..+. .-+..+
T Consensus       233 vpa~~----~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~-hg~~Ll  307 (538)
T KOG0252|consen  233 VPALL----VLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRW-HGKHLL  307 (538)
T ss_pred             HHHHH----HHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHH-HHHHHH
Confidence            44433    3344445555544221    0         000 00000000 00   0111112222211111 223445


Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccc--------cchhhhhhhhHHHhhhhheehhhccCCccchhHH
Q psy11785        143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANM--------VSGVGGILVMGIGIILSGVFILKFKPNARFVAAW  213 (308)
Q Consensus       143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl--------~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~  213 (308)
                      ..++..+..-.++|+...+...++++ .|+.+++..+        .-.++...+.+-|..++.+++|+.|++..++..+
T Consensus       308 gt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF  385 (538)
T KOG0252|consen  308 GTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGF  385 (538)
T ss_pred             HHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhH
Confidence            56666777778888888888888774 5666665443        0011112223447778889999999775555444

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=97.76  E-value=0.00025  Score=67.40  Aligned_cols=89  Identities=18%  Similarity=0.233  Sum_probs=63.4

Q ss_pred             HHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccch
Q psy11785        131 AVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFV  210 (308)
Q Consensus       131 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~  210 (308)
                      ...+++|||.++...+..++.......+.+|.+.|+++.-|.+....+.+...- ..+=+.-.++.+++.+|++.+  ++
T Consensus       199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~-~~aEi~~f~~~~~~~~r~g~~--~l  275 (400)
T PF03825_consen  199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALG-VVAEIPFFFFSGRFLKRFGIK--WL  275 (400)
T ss_pred             HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHH-HHHHHHHHHHHHHHHHhcCHH--HH
Confidence            346899999998888888888888889999999999987667767666544322 222344556789999999854  55


Q ss_pred             hHHHHHHHHHHH
Q psy11785        211 AAWIAITAVLYA  222 (308)
Q Consensus       211 ~~~~~~~~~~~~  222 (308)
                      +.++.+..++-.
T Consensus       276 l~~a~~~~~vR~  287 (400)
T PF03825_consen  276 LLLALVAYAVRW  287 (400)
T ss_pred             HHHHHHHHHHHH
Confidence            555555544443

>PRK09528 lacY galactoside permease; Reviewed

Probab=97.71  E-value=0.00012  Score=69.66  Aligned_cols=73  Identities=12%  Similarity=0.125  Sum_probs=62.1

Q ss_pred             HhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        134 RLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       134 ~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      ..++||.++...+..++...+...+..++|.|+++++|+|+.+.|++.+...+ +..++.++.|++.||+++|.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l-~~~i~~~~~G~l~Dr~g~r~   77 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSL-FALLFQPLYGLISDKLGLKK   77 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCchH
Confidence            45678888888888888888888899999999999999999999998876554 45778889999999999663

>KOG4686|consensus

Probab=97.66  E-value=0.00039  Score=62.38  Aligned_cols=181  Identities=16%  Similarity=0.158  Sum_probs=105.2

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |+-.+-..-.+|..-||+.||....+|+..++.-+|..+-+.+-+++.+.-.+.     .......-.|-| +-|-   .
T Consensus       149 GgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~-----~~~~ghT~LG~~-l~~~---~  219 (459)
T KOG4686|consen  149 GGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRM-----FPGVGHTLLGLW-LCFE---V  219 (459)
T ss_pred             CchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHh-----cccchHHHHHHH-HHHH---H
Confidence            333344455678888999999999999999999999888777766665421000     000011123332 2222   1


Q ss_pred             HHHHHHHH-HHhccCCCCCCCCcc-CCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHH
Q psy11785         82 FLMLAAVA-MFMFPKTLTKASPVN-GTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLY  159 (308)
Q Consensus        82 ~~ll~~i~-~~~~p~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~  159 (308)
                      ......+. ...+-  +.++..++ ..+|     +  ....+++++.|..      --.|.||...+..++.+.+++-|.
T Consensus       220 ~tc~~slical~lg--~~D~rAerilh~e-----~--g~~Ge~pkLtdv~------~f~ppfw~~~iicv~yyva~fPFi  284 (459)
T KOG4686|consen  220 KTCKQSLICALSLG--LSDDRAERILHLE-----E--GFLGEEPKLTDVN------TFYPPFWVLVIICVLYYVAWFPFI  284 (459)
T ss_pred             HHHHHHHHHHHHhh--hhhhHHHHHHhhh-----c--CcccCCccccccc------ccCccHHHHHHHHHHHHHHHHHHh
Confidence            11111111 11000  00111100 0011     0  0000111122210      013678888888899999999999


Q ss_pred             hHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        160 TFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      +..|.++++.||+|+..++-+.+.+-..+ .+-+.+-|.++||+|.+.
T Consensus       285 ~lg~~fF~~rfGlS~~~a~~i~s~vy~Is-av~spvfg~i~Dk~G~n~  331 (459)
T KOG4686|consen  285 TLGPMFFQKRFGLSAVSAGNILSTVYGIS-AVLSPVFGAISDKYGFNL  331 (459)
T ss_pred             hhhHHHHHHhhCCChhhccchhhhhhhhh-hhhhhhHHHhHhhhccee
Confidence            99999999999999999998776655544 345667789999999764

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=97.56  E-value=0.00025  Score=66.81  Aligned_cols=68  Identities=13%  Similarity=0.099  Sum_probs=58.6

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ||.++......++.+..+..+..++|.|+++++|+++.+.|++.+...+ ...++.++.|++.||+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l-~~~i~~~~~G~l~Dr~grr   68 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISL-FSILFQPLFGLISDKLGLK   68 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcH
Confidence            5777888888888888889999999999999999999999998776554 4577888999999999865

>KOG0255|consensus

Probab=97.48  E-value=0.00094  Score=65.41  Aligned_cols=48  Identities=17%  Similarity=0.191  Sum_probs=43.1

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      +.++.++++..++.|++++++|+.++.+ ......|+.+++.+++++.+
T Consensus       184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~  231 (521)
T KOG0255|consen  184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR  231 (521)
T ss_pred             hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence            4567788999999999999999999999 88889999999999998875

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=97.44  E-value=0.00017  Score=56.29  Aligned_cols=48  Identities=23%  Similarity=0.279  Sum_probs=42.3

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      +..++...+++.|.+|+++|++..++......+|..+||.+++++.+.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  113 (141)
T TIGR00880        66 AFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF  113 (141)
T ss_pred             HHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc
Confidence            345567788999999999999999999999999999999999988753

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=97.42  E-value=0.00027  Score=68.66  Aligned_cols=75  Identities=12%  Similarity=0.064  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHH--hCCCcccccccchhhhhhhhHHHhhhhheehhh-ccCCccchhHHHHHH
Q psy11785        141 LMYRTASSVLHILPIAGLYTFLPKYFETQ--FRLPSHTANMVSGVGGILVMGIGIILSGVFILK-FKPNARFVAAWIAIT  217 (308)
Q Consensus       141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~--~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r-~~~~~~~~~~~~~~~  217 (308)
                      ++...+..+++...+++...++|.|++++  +|++..+++++.+...+ +..++.+++|++.|| +|+|  +.+.++.+.
T Consensus        12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~-~~~~~~~~~G~laDr~~G~~--~~l~~~~~~   88 (475)
T TIGR00924        12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSA-LVYLLTSVGWWFGDRVWGTK--KTMVLGGIV   88 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH-HHHHHHhhHHHHHHhhcchH--HHHHHHHHH
Confidence            34555667778899999999999999988  99999999998876554 467889999999999 7865  444443333


Q ss_pred             H
Q psy11785        218 A  218 (308)
Q Consensus       218 ~  218 (308)
                      .
T Consensus        89 ~   89 (475)
T TIGR00924        89 L   89 (475)
T ss_pred             H
Confidence            3

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=97.41  E-value=0.0025  Score=62.12  Aligned_cols=67  Identities=15%  Similarity=0.184  Sum_probs=52.8

Q ss_pred             ccccccccchhhhcCccCCC--CchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANR--ESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLV   79 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~--~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~   79 (308)
                      |.+...+...+++.|.+|++  +|....++.+....+|..+||++.+++.+.+                  +|+.+|.+.
T Consensus       113 G~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~------------------Gw~~~F~ia  174 (493)
T PRK15462        113 GYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY------------------SWAMGFGLA  174 (493)
T ss_pred             hcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh------------------ChHHHHHHH
Confidence            44555566678999999876  6888999999999999999999999987643                  378888887


Q ss_pred             HHHHHHH
Q psy11785         80 AVFLMLA   86 (308)
Q Consensus        80 g~~~ll~   86 (308)
                      ++..++.
T Consensus       175 aigm~l~  181 (493)
T PRK15462        175 AVGMIAG  181 (493)
T ss_pred             HHHHHHH
Confidence            6644433

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=97.39  E-value=0.0055  Score=58.19  Aligned_cols=89  Identities=11%  Similarity=0.095  Sum_probs=57.6

Q ss_pred             HHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccc----ccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785        130 KAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHT----ANMVSGVGGILVMGIGIILSGVFILKFKP  205 (308)
Q Consensus       130 ~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~----agl~~g~~~i~~~~iG~~lgG~l~~r~~~  205 (308)
                      +..++++|+|.||...+........+..+-...|.|+...+. ++.+    .|.+.+ +.+..=++...+..++++|+|.
T Consensus       211 ~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~-~~~~g~~~~G~l~s-~~v~~E~~~m~~~p~li~rig~  288 (412)
T PF01306_consen  211 KDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQ-SAGQGNQMYGYLWS-VQVFLEALMMFFSPWLINRIGA  288 (412)
T ss_dssp             HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccChhHHhHHHH-HHHHHHHHHHHHHHHHHHhcCh
Confidence            557899999999988887766667777777778888887664 3322    333322 2222335667788999999985


Q ss_pred             CccchhHHHHHHHHHHH
Q psy11785        206 NARFVAAWIAITAVLYA  222 (308)
Q Consensus       206 ~~~~~~~~~~~~~~~~~  222 (308)
                      |  +.+.+..+...+-.
T Consensus       289 k--~~Lllag~i~~iRi  303 (412)
T PF01306_consen  289 K--NLLLLAGVIMAIRI  303 (412)
T ss_dssp             H--HHHHHHHHHHHHHH
T ss_pred             H--hHHHHHHHHHHHHH
Confidence            5  55444444444443

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=97.32  E-value=0.0083  Score=58.15  Aligned_cols=42  Identities=7%  Similarity=-0.055  Sum_probs=36.1

Q ss_pred             cchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785          9 LGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus         9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      +=.++..|.++.+|..|..+++.++..+|..+|+.+..++.+
T Consensus       149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~  190 (472)
T TIGR00769       149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK  190 (472)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            346788999999999999999999999999888888777664

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=97.30  E-value=0.00064  Score=66.24  Aligned_cols=66  Identities=17%  Similarity=0.215  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhc-cCC
Q psy11785        140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKF-KPN  206 (308)
Q Consensus       140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~-~~~  206 (308)
                      .++........+.+.+|++..++|.|+++++|++..+++.+.+... ....++.+++|++.||+ |+|
T Consensus        10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~-~~~~l~~ligG~LaDRilGrr   76 (493)
T PRK15462         10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYC-SLVYVTPILGGFLADKVLGNR   76 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHccCcH
Confidence            3445556667788899999999999999999999999998876554 34567889999999998 755

>PRK10054 putative transporter; Provisional

Probab=97.29  E-value=0.00086  Score=63.38  Aligned_cols=65  Identities=17%  Similarity=0.153  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ++...+..++.....+....++|.|+++++|++..+.|++.+...+ ..+++.++.|++.||+++|
T Consensus         9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~g~k   73 (395)
T PRK10054          9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALT-IGVVFSLGFGILADKFDKK   73 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcCcc
Confidence            4455566677777788888999999999999999999998765544 4567788999999999875

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=97.24  E-value=0.00074  Score=66.07  Aligned_cols=73  Identities=10%  Similarity=0.034  Sum_probs=55.9

Q ss_pred             HHhhcChH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhh-ccCC
Q psy11785        133 KRLLKNDI-LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILK-FKPN  206 (308)
Q Consensus       133 ~~Ll~n~~-f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r-~~~~  206 (308)
                      .+++++|. ++...+..+++...++++.+++|.|+++++|++..+++...+.... ......+++|++.|| +|+|
T Consensus        14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~~~~G~LaDr~~G~r   88 (500)
T PRK09584         14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSA-LVYGLVAIGGWLGDKVLGTK   88 (500)
T ss_pred             hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhccchH
Confidence            45567774 7777778888999999999999999999999999988776554322 223334689999999 5865

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=97.23  E-value=0.00092  Score=61.69  Aligned_cols=65  Identities=14%  Similarity=0.166  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ++...++....+...+.+..++|.++++++|+|+.+.+++.+...+ +.+++.++.|++.||+++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r   67 (366)
T TIGR00886         3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVL-AGAVLRIILGFLVDKFGPR   67 (366)
T ss_pred             hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHH-HHHHHHHHHHHHHHHhCch
Confidence            4456666677777888899999999999999999999998766544 5678899999999999866

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=97.21  E-value=0.00026  Score=72.30  Aligned_cols=74  Identities=9%  Similarity=0.049  Sum_probs=58.9

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL   83 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~   83 (308)
                      ++.++...+++.|++|+++|++++|+..++..+|.++||++++.+.+..                   .+..|++.+++.
T Consensus       663 ~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-------------------~~~pf~i~a~~l  723 (742)
T TIGR01299       663 IAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-------------------KAAPILFASAAL  723 (742)
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------------hHHHHHHHHHHH
Confidence            3456677889999999999999999999999999999999999886531                   245677777776


Q ss_pred             HHHHHHHHhccCC
Q psy11785         84 MLAAVAMFMFPKT   96 (308)
Q Consensus        84 ll~~i~~~~~p~~   96 (308)
                      ++.++..+++||+
T Consensus       724 ll~~ll~~~LPET  736 (742)
T TIGR01299       724 ACGGLLALKLPDT  736 (742)
T ss_pred             HHHHHHHHhCCCC
Confidence            6666666666654

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=97.17  E-value=0.0014  Score=61.55  Aligned_cols=67  Identities=15%  Similarity=0.175  Sum_probs=52.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        139 DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       139 ~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +.+....+...............+|.++++++|+|..+.|++.+...+ +..++.++.|++.||+++|
T Consensus        15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~-~~~i~~~~~G~l~Dr~g~r   81 (399)
T PRK05122         15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYL-ATLLSRPHAGRYADTLGPK   81 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHH-HHHHhchhhHhHHhccCCc
Confidence            444555666666666666677789999999999999999998876654 4577889999999999976

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=97.14  E-value=0.001  Score=63.14  Aligned_cols=71  Identities=11%  Similarity=0.145  Sum_probs=58.2

Q ss_pred             hcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        136 LKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       136 l~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      +||+.|+...+..++.++.+..+..|.|.+|++.-|+|+.+.|++++...+ ..++..++.|.+.||++.|.
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~-~~l~~qp~~G~i~Dklg~kK   74 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSL-FALLAQPVYGFISDKLGLKK   74 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH-HHHHTHHHHHHHHHHCTTCS
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHH-HHHHHHHhHHHhcchhhhhH
Confidence            468889888888888899999999999999999899999999999886554 45666778899999999763

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK12382 putative transporter; Provisional

Probab=97.13  E-value=0.0012  Score=61.97  Aligned_cols=67  Identities=7%  Similarity=0.109  Sum_probs=51.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        139 DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       139 ~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +.++...++.++...........+|.|+++++|+|+.+.|++.+...+ +..++.++.|+++||+++|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~-~~~i~~~~~G~l~Dr~g~r   81 (392)
T PRK12382         15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFL-ATVLTRGYAGRLADQYGAK   81 (392)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHH-HHHHHhhhhhHHHHhhcch
Confidence            334444455555566666667789999999999999999998876655 4567788999999999866

>TIGR00889 2A0110 nucleoside transporter

Probab=97.02  E-value=0.00058  Score=65.13  Aligned_cols=48  Identities=15%  Similarity=0.162  Sum_probs=41.5

Q ss_pred             cccccchhhhcCccCCCCchhHHHHHH-HHHHHHHHHHHHHHHhhhccc
Q psy11785          5 AVYTLGIPYIDDNVANRESPLYFAITI-GVRILGPSLGFILGSFCTRLY   52 (308)
Q Consensus         5 ~~~~lg~a~i~d~~~~~~~~~~~gi~~-~~~~~Gp~lG~~lGg~ll~~~   52 (308)
                      ...+....++.|.+|+++|++++|+.+ +...+|.++||+++|++.+.+
T Consensus       324 ~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~  372 (418)
T TIGR00889       324 FFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKM  372 (418)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence            445667788999999999999999997 678899999999999998753

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=97.02  E-value=0.0049  Score=59.03  Aligned_cols=99  Identities=7%  Similarity=0.112  Sum_probs=70.6

Q ss_pred             HHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchh
Q psy11785        132 VKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVA  211 (308)
Q Consensus       132 ~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~  211 (308)
                      ++.-+++|.|. ..++..+.++.+-+|...+-.|+.++ |+++...|.+-+.-. ...+.|+++..++.+|+|+.  +..
T Consensus       252 w~~Y~~q~vfl-as~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~ga-v~Gl~gT~~~p~l~~riGlv--r~G  326 (432)
T PF06963_consen  252 WRTYFRQPVFL-ASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGA-VFGLLGTWVYPWLMKRIGLV--RAG  326 (432)
T ss_pred             HHHHHhCHHHH-HHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcch--hhH
Confidence            34456677765 56777777777888888999999998 999999988765433 34678999999999999965  444


Q ss_pred             HHHHHHHHHHHHHHhHHHhcCCCC
Q psy11785        212 AWIAITAVLYALGMGILTFIGCPM  235 (308)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~C~~  235 (308)
                      .+++......+.+....++...++
T Consensus       327 ~~~l~~q~~~L~~~v~~~~~~~~~  350 (432)
T PF06963_consen  327 LWSLWWQWVCLALCVVSFWAPGSP  350 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCC
Confidence            555666665555544445555543

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG2325|consensus

Probab=96.81  E-value=0.013  Score=56.57  Aligned_cols=44  Identities=30%  Similarity=0.331  Sum_probs=36.5

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      ...-.+|+.|....++|.++++....+..+|.++||.++..+..
T Consensus       147 ~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~  190 (488)
T KOG2325|consen  147 FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP  190 (488)
T ss_pred             HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence            35668999999999999999999988888888888877776654

>PF12832 MFS_1_like: MFS_1 like family

Probab=96.80  E-value=0.0026  Score=45.80  Aligned_cols=58  Identities=22%  Similarity=0.357  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        147 SSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       147 ~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ..++.+.+...+.-|+|.|++ +.|+++.+.|++.++..+ ..+++.++.|.++||++.+
T Consensus         8 ~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~-~~~~~~pl~g~laDk~~~~   65 (77)
T PF12832_consen    8 FYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPL-IRFLAPPLWGFLADKFGKR   65 (77)
T ss_pred             HHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCcc
Confidence            345566677778889999998 599999999998876544 3578899999999999854

>PRK10489 enterobactin exporter EntS; Provisional

Probab=96.66  E-value=0.0056  Score=57.96  Aligned_cols=75  Identities=13%  Similarity=0.176  Sum_probs=58.5

Q ss_pred             HHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        131 AVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       131 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      +++.+.||+.+....+..++...........+|.+.++ ++.++.+.|++.+...+ +.+++.++.|++.||+++|.
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l-~~~~~~~~~G~l~dr~g~~~   83 (417)
T PRK10489          9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGG-AMFIGLMVGGVLADRYDRKK   83 (417)
T ss_pred             HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH-HHHHHHHhhHHHhhhcCCce
Confidence            44555678988888787777777777778888988765 56799999988776655 45778899999999998763

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=96.63  E-value=0.0043  Score=59.03  Aligned_cols=73  Identities=16%  Similarity=0.235  Sum_probs=53.1

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHH-HHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGV-RILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLM   84 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~-~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~l   84 (308)
                      .+..+..|+++++|++.|+.+.+++.+. .++|.++|.++||++.+.|.            .+..-.|...|.+.+++.+
T Consensus       318 ~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g------------~~~~~~~~~~~~v~a~~~~  385 (400)
T PF03825_consen  318 FHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG------------ARGMFDWSAVFLVFAVMAL  385 (400)
T ss_pred             HHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc------------chhhhhHHHHHHHHHHHHH
Confidence            4567789999999999999999998864 68999999999999988652            1222234455555555554


Q ss_pred             HHHHHH
Q psy11785         85 LAAVAM   90 (308)
Q Consensus        85 l~~i~~   90 (308)
                      +..+.+
T Consensus       386 ~~~~~f  391 (400)
T PF03825_consen  386 VILVLF  391 (400)
T ss_pred             HHHHHH
Confidence            444443

>KOG0253|consensus

Probab=96.61  E-value=0.056  Score=50.57  Aligned_cols=74  Identities=12%  Similarity=0.076  Sum_probs=48.2

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      -++ +|.-.++-.|.-|..+|...+=.. +.+.+|.++.-.+.-.....+                  +|+.-.+..+..
T Consensus       180 ~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~------------------gwr~~l~~~~~p  239 (528)
T KOG0253|consen  180 VGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF------------------GWRYLLFTSSTP  239 (528)
T ss_pred             CCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh------------------hHHHHHHHHHhH
Confidence            344 677778888888988888765555 778888888877766555432                  243333344455


Q ss_pred             HHHHHHHHHhccCC
Q psy11785         83 LMLAAVAMFMFPKT   96 (308)
Q Consensus        83 ~ll~~i~~~~~p~~   96 (308)
                      ..+.+...+..||.
T Consensus       240 l~~~a~f~~w~~ES  253 (528)
T KOG0253|consen  240 LMFAARFLVWVYES  253 (528)
T ss_pred             HHHHHHHHhhcccC
Confidence            55566666666665

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=96.55  E-value=0.0069  Score=59.15  Aligned_cols=66  Identities=14%  Similarity=0.071  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhh-ccCC
Q psy11785        140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILK-FKPN  206 (308)
Q Consensus       140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r-~~~~  206 (308)
                      .++...+..+.+.+.+|++..+++.|+++.+|++..+++.+.+..... ..+..+++|++.|| +|+|
T Consensus        15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~-~~~~~~~~G~laDr~~G~r   81 (489)
T PRK10207         15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAAL-VYGLISIGGYVGDHLLGTK   81 (489)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHhhHHHhhhhccchH
Confidence            344555667788999999999999999999999999988766554332 34456789999999 8865

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=96.52  E-value=0.058  Score=52.60  Aligned_cols=40  Identities=10%  Similarity=0.090  Sum_probs=30.9

Q ss_pred             hhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785         11 IPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus        11 ~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      .++..|.++.+|..|+.+++.++..+|.++|..+..++.+
T Consensus       166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~  205 (491)
T PF03219_consen  166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS  205 (491)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5677899999999999999988877777666655555544

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>cd01328 FSL_SPARC Follistatin-like SPARC (secreted protein, acidic, and rich in cysteines) domain; SPARC/BM-40/osteonectin is a multifunctional glycoprotein which modulates cellular interaction with the extracellular matrix by its binding to structural matrix proteins such as collagen and vitronectin

Probab=96.51  E-value=0.0015  Score=47.83  Aligned_cols=28  Identities=25%  Similarity=0.635  Sum_probs=20.8

Q ss_pred             CCCCCCccCCCCCcceeeCCCCceecCccc
Q psy11785        254 CATTHGCECDHSKFNPICGGDGRTYFSACH  283 (308)
Q Consensus       254 Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~  283 (308)
                      |...  |.=..+.++||||+||.||=|.||
T Consensus        25 C~~~--Cp~~~~~~~~VCGsDg~TY~s~C~   52 (86)
T cd01328          25 CIDP--CPEEVDDRRKVCTNDNETFDSDCE   52 (86)
T ss_pred             cCCc--CCCCCCCCCceeCCCCCCcccHhH
Confidence            4444  333334568899999999999997

The protein it composed of an N-terminal acidic region, a follistatin (FS) domain and an EF-hand calcium binding domain. The FS domain consists of an N-terminal beta hairpin (FOLN/EGF-like domain) and a small hydrophobic core of alpha/beta structure (Kazal domain) and has five disulfide bonds and a conserved N-glycosylation site. The FSL_SPARC domain is a member of the superfamily of kazal-like proteinase inhibitors and follistatin-like proteins.

>PRK11043 putative transporter; Provisional

Probab=96.51  E-value=0.0091  Score=56.11  Aligned_cols=60  Identities=12%  Similarity=0.188  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHHHHHhHHHHH--HHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        146 ASSVLHILPIAGLYTFLPKY--FETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       146 l~~~~~~~~~~~~~~~~P~y--l~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +..........+...+.|.+  +++++|+++.+.+++.+... .+..++.++.|++.||+++|
T Consensus        10 ~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~g~r   71 (401)
T PRK11043         10 YLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFL-AGFALGQLLWGPLSDRYGRK   71 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHH-HHHHHHHHhhhhHHhhcCCc
Confidence            33333444445555566655  67789999999999877654 35678899999999999876

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=96.50  E-value=0.0025  Score=59.80  Aligned_cols=71  Identities=17%  Similarity=0.213  Sum_probs=54.5

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+..+|...+++.|..+++++++.+++......+|.++||.++|++.+.+                  +|+..|++.+++
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~------------------g~~~~f~~~~~~  386 (408)
T PRK09874        325 DGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY------------------GFRAVFLVTAGV  386 (408)
T ss_pred             hHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc------------------chhHHHHHHHHH
Confidence            34455666777888889999999999999999999999999999987632                  266677777766


Q ss_pred             HHHHHHHHH
Q psy11785         83 LMLAAVAMF   91 (308)
Q Consensus        83 ~ll~~i~~~   91 (308)
                      .++.++..+
T Consensus       387 ~l~~~~~~~  395 (408)
T PRK09874        387 VLFNAVYSW  395 (408)
T ss_pred             HHHHHHHHH
Confidence            665554433

>PRK03633 putative MFS family transporter protein; Provisional

Probab=96.45  E-value=0.0039  Score=58.35  Aligned_cols=69  Identities=13%  Similarity=0.179  Sum_probs=52.9

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFL   83 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~   83 (308)
                      ...+|...+++.|.+|+++++.+.+.+.....+|.++||.++|++.+.+                  +|+..|++.+...
T Consensus       300 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~------------------g~~~~f~~~~~~~  361 (381)
T PRK03633        300 FTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY------------------SDNLLFIMIASVS  361 (381)
T ss_pred             HhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------CccHHHHHHHHHH
Confidence            4567888888999999988888888888889999999999999998754                  2455677766665


Q ss_pred             HHHHHHH
Q psy11785         84 MLAAVAM   90 (308)
Q Consensus        84 ll~~i~~   90 (308)
                      ++..+.+
T Consensus       362 l~~~~~~  368 (381)
T PRK03633        362 FIYLLML  368 (381)
T ss_pred             HHHHHHH
Confidence            5544333

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=96.44  E-value=0.0075  Score=57.67  Aligned_cols=73  Identities=12%  Similarity=0.084  Sum_probs=52.8

Q ss_pred             HHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        130 KAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       130 ~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +.++++ +++.++...+.....+.....+....|.+ ++ +|+++.+.+++.+...+ +..++.++.|++.||+++|
T Consensus        19 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~-~g~s~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~g~~   91 (438)
T TIGR00712        19 PTYKRL-RWQVFLGIFFGYAAYYLVRKNFALAMPYL-VE-QGFSKGELGFALSAISI-AYGFSKFIMGSVSDRSNPR   91 (438)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHhccHHhhhHHH-HH-cCCCHhHhHHHHHHHHH-HHHHhhhccchhhhccCCc
Confidence            345555 56676666666666666666667777754 44 59999999988765544 5678899999999999965

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=96.42  E-value=0.0004  Score=66.96  Aligned_cols=49  Identities=14%  Similarity=-0.035  Sum_probs=42.7

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      .+...+...+++.|.+|++++++++|++++...+|.++||.++|++.+.
T Consensus       347 ~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~  395 (455)
T TIGR00892       347 FGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA  395 (455)
T ss_pred             hchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh
Confidence            3445567788999999999999999999999999999999999988753

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=96.41  E-value=0.01  Score=56.11  Aligned_cols=74  Identities=11%  Similarity=0.092  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHH
Q psy11785        144 RTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVL  220 (308)
Q Consensus       144 ~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~  220 (308)
                      .....++...+.+....++|.|+++++|+|+.+.|+..+...++. .+..+++|++.||+++|  +.+..+.+...+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~-~~~~~~~G~l~dr~g~k--~~l~~~~~~~~~   88 (400)
T PRK11646         15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQ-QGLGIFGGAIADRFGAK--PMIVTGMLMRAA   88 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-HHHHhhhhHHHHHhCch--HHHHHHHHHHHH
Confidence            335556667777888889999999999999999999887655544 34467889999999864  444444443333

>PRK15011 sugar efflux transporter B; Provisional

Probab=96.39  E-value=0.011  Score=55.61  Aligned_cols=69  Identities=9%  Similarity=-0.057  Sum_probs=53.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      |.+.+...+..++.......+...+|.|+++++|+|+++.|++.....+.+..++.+.+|+ .||+++|.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~   82 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRK   82 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccchh
Confidence            4444555555666666777778889999999999999999998655556667788888888 99998764

>PRK11663 regulatory protein UhpC; Provisional

Probab=96.30  E-value=0.0089  Score=57.14  Aligned_cols=66  Identities=14%  Similarity=0.213  Sum_probs=49.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        139 DILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       139 ~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +.++...+..+..+...+.+..++|.+.++ +|+|+.+.|++.+...+ +..++.+++|++.||+++|
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~g~r   88 (434)
T PRK11663         23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYI-TYGVSKFVSGIVSDRSNAR   88 (434)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHH-HHHHHHhhhhHHHhhcCCc
Confidence            344455555555666666778889988774 99999999988765544 4577889999999999876

>PRK03699 putative transporter; Provisional

Probab=96.30  E-value=0.0091  Score=56.17  Aligned_cols=65  Identities=12%  Similarity=-0.021  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .++...+..++.......+...+|.+. +++|+|.++.+++.+...+ +..++.+++|++.||+++|
T Consensus         8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~-~~~~~s~~~~g~~~s~~~~-~~~i~~~~~g~l~dr~g~r   72 (394)
T PRK03699          8 LTWISFLSYALTGALVIVTGMVMGPIA-EYFNLPVSSMSNTFTFLNA-GILISIFLNAWLMEIIPLK   72 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHH-HHhCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhHH
Confidence            344455555666666677777888855 5799999999988765543 6788999999999999865

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=96.26  E-value=0.0045  Score=56.02  Aligned_cols=49  Identities=12%  Similarity=0.093  Sum_probs=44.7

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      +.+...+...+++.|.+|+++|++.+|+......+|..+++.++|.+.+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~  326 (352)
T cd06174         278 GLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD  326 (352)
T ss_pred             HHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            4456778889999999999999999999999999999999999999875

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=96.18  E-value=0.0066  Score=57.50  Aligned_cols=45  Identities=9%  Similarity=-0.077  Sum_probs=39.6

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      .+...+++.|.+|+++|++++|+......+|.+++|.+.+.+.+.
T Consensus       401 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~  445 (481)
T TIGR00879       401 GPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES  445 (481)
T ss_pred             cCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            356677889999999999999999999999999999999987653

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK10504 putative transporter; Provisional

Probab=96.16  E-value=0.013  Score=56.41  Aligned_cols=65  Identities=15%  Similarity=0.045  Sum_probs=50.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .++...++.++.....+.+..++|.|.++ +|+++.+.+++..... .+.+++.++.|++.||+++|
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~r   75 (471)
T PRK10504         11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYV-LTVAVMLPASGWLADRVGVR   75 (471)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhchH
Confidence            45566667777777778888899998875 9999999888765443 34577889999999999866

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=96.09  E-value=0.0059  Score=56.03  Aligned_cols=48  Identities=10%  Similarity=0.102  Sum_probs=42.1

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      +..++...+++.|.+|+++|++++|++.....+|.++||.++|.+.+.
T Consensus       310 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~  357 (377)
T TIGR00890       310 GGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE  357 (377)
T ss_pred             ccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            344566678899999999999999999999999999999999998764

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=96.08  E-value=0.019  Score=55.62  Aligned_cols=69  Identities=6%  Similarity=0.009  Sum_probs=54.6

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      ++.++...++....+...+.+....+.+-+..+++|+++.+++.+...+.+ .++.+..|++.||+|.|.
T Consensus        33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~-al~rip~G~l~Dr~G~R~  101 (462)
T PRK15034         33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSG-ALLRVPYSFMVPIFGGRR  101 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCChH
Confidence            457777888888888888888888888878789999999998877555443 466677799999999773

>PTZ00207 hypothetical protein; Provisional

Probab=96.04  E-value=0.0072  Score=60.19  Aligned_cols=76  Identities=13%  Similarity=0.099  Sum_probs=53.0

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHH-HHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSL-GFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVA   80 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~l-G~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g   80 (308)
                      |++..++.....+.+++| ++||+++|++.++..+|+++ +++..+++..                    .|+..|++.+
T Consensus       133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--------------------~~~~~fl~l~  191 (591)
T PTZ00207        133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--------------------NTSAYFFFLM  191 (591)
T ss_pred             HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------hHHHHHHHHH
Confidence            455566777888899996 78899999999999999975 6666555431                    1445566667


Q ss_pred             HHHHHHHHHHHhccCCCC
Q psy11785         81 VFLMLAAVAMFMFPKTLT   98 (308)
Q Consensus        81 ~~~ll~~i~~~~~p~~~p   98 (308)
                      ++.+++++.++.+-+..|
T Consensus       192 vl~~vv~ll~~~~vr~p~  209 (591)
T PTZ00207        192 SFALVVGILAIVFMRLPP  209 (591)
T ss_pred             HHHHHHHHHHHhheeCCc
Confidence            776666666555544433

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=96.03  E-value=0.0071  Score=56.85  Aligned_cols=46  Identities=13%  Similarity=-0.012  Sum_probs=40.9

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      ..+...+++.|.+|+++|++.+|+.+....+|.++||.++|++.+.
T Consensus       325 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~  370 (406)
T PRK11551        325 GQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL  370 (406)
T ss_pred             HHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc
Confidence            3456678889999999999999999999999999999999998764

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=96.01  E-value=0.025  Score=54.86  Aligned_cols=54  Identities=9%  Similarity=0.071  Sum_probs=38.5

Q ss_pred             HHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        152 ILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       152 ~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      ....++...++| ++++++|++..+.+++... ...+..++.+++|++.||+++|.
T Consensus        49 ~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~-~~~~~~~~~~~~G~l~dr~G~r~  102 (476)
T PLN00028         49 FVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIA-SVSGSIFSRLAMGPVCDLYGPRY  102 (476)
T ss_pred             HHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChH
Confidence            333444444445 5677899999999876543 34466788999999999999763

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=95.98  E-value=0.02  Score=53.65  Aligned_cols=53  Identities=6%  Similarity=0.056  Sum_probs=38.4

Q ss_pred             HHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        152 ILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       152 ~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ......+...+|.+ .+++|+|+.+.++..+...+ +..++.++.|++.||+++|
T Consensus        21 ~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~l~Dr~grr   73 (394)
T PRK11652         21 QMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLL-TYGLSQLFYGPLSDRVGRR   73 (394)
T ss_pred             HHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHH-HHHHHHHhhhhHHHhcCCh
Confidence            33333344455654 46799999999988776554 4678889999999999865

>PRK09848 glucuronide transporter; Provisional

Probab=95.95  E-value=0.02  Score=54.87  Aligned_cols=63  Identities=11%  Similarity=0.070  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ...++.............+++.|++++.|+++.++|+++....+ ..++..++.|+++||.+.|
T Consensus        12 ~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~-~~~~~~~~~G~l~Dr~~~~   74 (448)
T PRK09848         12 GYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRV-FDAFADVFAGRVVDSVNTR   74 (448)
T ss_pred             hhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHhhhhheeeeecCCCC
Confidence            33344444555555566778889999999999999988765544 3466788999999998654

>TIGR00893 2A0114 d-galactonate transporter

Probab=95.95  E-value=0.012  Score=53.96  Aligned_cols=46  Identities=20%  Similarity=0.143  Sum_probs=42.4

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      ..+...+++.|.+|+++|++++|+......+|.++||.++|++.+.
T Consensus       328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~  373 (399)
T TIGR00893       328 AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT  373 (399)
T ss_pred             hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC
Confidence            5678889999999999999999999999999999999999998764

>TIGR00891 2A0112 putative sialic acid transporter

Probab=95.91  E-value=0.026  Score=52.53  Aligned_cols=65  Identities=12%  Similarity=0.097  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .+....++........+.+....|. +++++|++..+.+++.+...+ +..++.++.|++.||+++|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~G~l~Dr~g~r   77 (405)
T TIGR00891        13 AFSAAWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALI-SRWFGALMFGLWGDRYGRR   77 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHH-HHHHHHHHHHHHHHHhccH
Confidence            3445556666666666666777775 567899999999988765544 5678899999999999865

>TIGR00898 2A0119 cation transport protein

Probab=95.88  E-value=0.0099  Score=57.73  Aligned_cols=71  Identities=17%  Similarity=0.203  Sum_probs=54.2

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML   85 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll   85 (308)
                      .++...++..|.+|++.|+.++|+..+...+|.++||.+.+ +.+.                   .+...|++.++..++
T Consensus       427 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-------------------~~~~~~~~~~~~~~~  486 (505)
T TIGR00898       427 AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-------------------WLFLPLVLFGGLALL  486 (505)
T ss_pred             HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-------------------HHhhHHHHHHHHHHH
Confidence            45667788999999999999999999999999999999988 4321                   134566666666666


Q ss_pred             HHHHHHhccCC
Q psy11785         86 AAVAMFMFPKT   96 (308)
Q Consensus        86 ~~i~~~~~p~~   96 (308)
                      .++..+++||+
T Consensus       487 ~~~~~~~lpet  497 (505)
T TIGR00898       487 AGILTLFLPET  497 (505)
T ss_pred             HHHHHHcCcCC
Confidence            66666666654

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=95.84  E-value=0.035  Score=53.35  Aligned_cols=47  Identities=13%  Similarity=0.143  Sum_probs=36.6

Q ss_pred             HHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        157 GLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       157 ~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ++...+|. ++++ |+++.+.++......+ +.+++.++.|++.||+++|
T Consensus        47 ~~~~~~p~-l~~~-g~s~~~~g~~~~~~~i-~~~~~~~~~G~l~Dr~g~k   93 (452)
T PRK11273         47 NFALAMPY-LVEQ-GFSRGDLGFALSGISI-AYGFSKFIMGSVSDRSNPR   93 (452)
T ss_pred             HHHHhhHH-HHHc-CCCHHHHHHHHHHHHH-HHHHHHhhhhhhhhccCCc
Confidence            45566775 5556 9999999988765544 5678899999999999976

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=95.79  E-value=0.21  Score=46.37  Aligned_cols=92  Identities=11%  Similarity=0.056  Sum_probs=51.9

Q ss_pred             cchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785        127 DFPKAVKRLLKNDILMYRTASSVLHILPIAGLYT-FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP  205 (308)
Q Consensus       127 ~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~-~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~  205 (308)
                      ++.+.++.++++|..+..-+.+.+.-..+|.|.. |.|..-.+.   ....-|+++...++ ++++|+.+-.++..|- .
T Consensus       232 ~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~---~~~P~GlIFssFM~-a~MlGS~lf~~l~s~~-~  306 (354)
T PF05631_consen  232 SFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDD---EELPLGLIFSSFMV-AMMLGSSLFSRLLSKS-L  306 (354)
T ss_pred             HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCC---CCCCchHHHHHHHH-HHHHHHHHHHHHHhCC-C
Confidence            3455677888889888877777776666666654 677643111   11224555544332 3455555554444432 4


Q ss_pred             CccchhHHHHHHHHHHHH
Q psy11785        206 NARFVAAWIAITAVLYAL  223 (308)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~  223 (308)
                      |....+...+.+..+++.
T Consensus       307 ~~e~~l~~v~~~aa~~l~  324 (354)
T PF05631_consen  307 RPESLLRYVFAVAAVSLA  324 (354)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            555666666655555443

>TIGR00897 2A0118 polyol permease family

Probab=95.70  E-value=0.026  Score=53.22  Aligned_cols=62  Identities=16%  Similarity=0.181  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ...++.++.....+....++|.+++ ++|+|+.++|++.+...+ +..++.++.|++.||+++|
T Consensus        17 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~-~~~i~~~~~g~l~dr~g~k   78 (402)
T TIGR00897        17 WGYIGVVVFMTGDGLEQGWLSPFLK-ALGLSPQQSASAFTLYGI-AAAISAWISGVVAEIIGPL   78 (402)
T ss_pred             HHHHHHHHHHHhhhhHHHhHHHHHH-HhCCCHHHhHHHHHHHHH-HHHHHHHHHHHHHHHcCcH
Confidence            3444444444444455567888885 589999999998765544 4578889999999999875

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=95.69  E-value=0.34  Score=49.15  Aligned_cols=85  Identities=13%  Similarity=0.125  Sum_probs=57.7

Q ss_pred             CccccccccchhhhcCccCCCC---chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRE---SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLV   77 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~---~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fi   77 (308)
                      +|.++.-|.-.+...|-+++++   +-.+..+++.+..+|..+++++-.++-+.+...         + .+. +|+.+|.
T Consensus        97 ~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f---------g-~~~-~~~~aF~  165 (654)
T TIGR00926        97 LGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF---------G-CQD-CYPLAFG  165 (654)
T ss_pred             hhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---------c-cCc-chHHHHH
Confidence            4677788888889999887543   566778888899999999988888765322100         0 011 4889999


Q ss_pred             HHHHHHHHHHHHHHhccCC
Q psy11785         78 LVAVFLMLAAVAMFMFPKT   96 (308)
Q Consensus        78 i~g~~~ll~~i~~~~~p~~   96 (308)
                      +.+++.++..+.+....+.
T Consensus       166 i~~i~m~ia~lvf~~g~k~  184 (654)
T TIGR00926       166 VPAILMILALIVFMAGSKM  184 (654)
T ss_pred             HHHHHHHHHHHHHHHhccc
Confidence            8887776665554443333

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=95.64  E-value=0.071  Score=51.49  Aligned_cols=81  Identities=14%  Similarity=0.176  Sum_probs=62.8

Q ss_pred             CccccccccchhhhcCccCCCC--chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRE--SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVL   78 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~--~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii   78 (308)
                      +|.+.+=|-..+++.|.+|+++  |-..+++++++..+|..++|++-+++.+.|                  +|+.+|-+
T Consensus       129 iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~------------------g~~~gF~~  190 (498)
T COG3104         129 VGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY------------------GWHVGFGL  190 (498)
T ss_pred             hccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh------------------CHHHHHHH
Confidence            4666667777888999887663  566778899999999999999999987654                  49999999


Q ss_pred             HHHHHHHHHHHHHhccCCCCC
Q psy11785         79 VAVFLMLAAVAMFMFPKTLTK   99 (308)
Q Consensus        79 ~g~~~ll~~i~~~~~p~~~p~   99 (308)
                      .++...+..+.++..+|....
T Consensus       191 aavGm~~gl~~f~~~~r~~~~  211 (498)
T COG3104         191 AAVGMIIGLVIFLLGRRHVKG  211 (498)
T ss_pred             HHHHHHHHHHHHHHccchhcC
Confidence            988777666666666665443

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=95.62  E-value=0.038  Score=52.55  Aligned_cols=46  Identities=22%  Similarity=0.254  Sum_probs=36.5

Q ss_pred             HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ...+|. +++++|+|..++|++..... .+..++.+..|++.||+++|
T Consensus        23 ~~l~~~-~~~~~~~s~~~~g~l~s~~~-~g~~i~~~~~g~l~~r~G~r   68 (410)
T TIGR00885        23 NPMVPQ-FQQAFTLTAFQAALVQSAFY-GGYFIMAIPAAIFMKKLSYK   68 (410)
T ss_pred             HHHHHH-HHHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCch
Confidence            355664 58899999999998876543 45678889999999999966

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=95.62  E-value=0.017  Score=54.47  Aligned_cols=48  Identities=10%  Similarity=0.090  Sum_probs=37.8

Q ss_pred             ccccccchhhhcCcc-CCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          4 TAVYTLGIPYIDDNV-ANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         4 a~~~~lg~a~i~d~~-~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      +..+|...+...|.. |++++++..|+.+....++..+||.+.|++.+.
T Consensus       307 g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~  355 (393)
T PRK09705        307 GGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSI  355 (393)
T ss_pred             cchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555555555666 467899999999999999999999999999874

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=95.58  E-value=0.019  Score=52.27  Aligned_cols=73  Identities=12%  Similarity=0.029  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785        146 ASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY  221 (308)
Q Consensus       146 l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~  221 (308)
                      +..++.......+...+|.++.+++|.|..+.+++.+...+ +..++.++.|++.||+++|  +.+..+.+...++
T Consensus         3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r--~~l~~~~~~~~~~   75 (352)
T PF07690_consen    3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFL-GSALFSPFAGYLSDRFGRR--RVLIIGLLLFALG   75 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHH-HHHHHHHHHHHHHHHS-HH--HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCe--eeEeehhhhhhhH
Confidence            34445555566677778878888999999999998766544 4577889999999999854  4555555555554

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=95.55  E-value=0.029  Score=53.25  Aligned_cols=65  Identities=8%  Similarity=-0.025  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      +....+...+.+.-........| .+++++|++..+.|++.+... .+..++.+..|++.||+++|.
T Consensus        10 ~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~G~r~   74 (412)
T TIGR02332        10 IIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFY-AAYVICGIPSNIMLAIIGARR   74 (412)
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHH-HHHHHHHhhHHHHHHHhChHH
Confidence            33444455555555555666666 788899999999998876554 456788899999999999763

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=95.53  E-value=0.047  Score=51.52  Aligned_cols=76  Identities=11%  Similarity=-0.023  Sum_probs=50.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHH
Q psy11785        138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT  217 (308)
Q Consensus       138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~  217 (308)
                      ||.|+...++.++....-..+...+|.+ ..+++.++.+.+++.+...++ ..+..+++|++.||+++|  +++.++.+.
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~-~~l~~~~~G~laDr~grr--~vl~~~~~~   77 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLA-YIVLAPFVGAFADSFPKG--RVMFIANGI   77 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHH-HHHHHhhhhHhhhccCCc--hhhHHHHHH
Confidence            4556666666666665544455555655 457888888888877666554 567788999999999976  444444433

>PRK03893 putative sialic acid transporter; Provisional

Probab=95.53  E-value=0.031  Score=54.02  Aligned_cols=45  Identities=22%  Similarity=0.210  Sum_probs=39.8

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      .++..+++.|.+|+++|++.+|+++....+|..+||+++|++.+.
T Consensus       384 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~  428 (496)
T PRK03893        384 SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR  428 (496)
T ss_pred             chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence            345567889999999999999999999999999999999998764

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=95.49  E-value=0.027  Score=51.62  Aligned_cols=55  Identities=16%  Similarity=0.214  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        150 LHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       150 ~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ..+.....+...+| ++++++|++..+.+++.+...+ +..++.++.|++.||+++|
T Consensus         6 ~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r   60 (379)
T TIGR00881         6 AYYLVRKNFALAMP-YLVEEIGLSKTDLGLLLSSFSI-AYGISKFVMGSVSDRSNPR   60 (379)
T ss_pred             HHHHhHHhhhhhhH-HHHHHhCCCHhHHHHHHHHHHH-HHHhhhhhhhHHHHhhCCe
Confidence            44445566666777 4667899999999988765544 5678889999999999876

>PRK10133 L-fucose transporter; Provisional

Probab=95.45  E-value=0.051  Score=52.18  Aligned_cols=69  Identities=16%  Similarity=0.068  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785        149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY  221 (308)
Q Consensus       149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~  221 (308)
                      +...+.-......+|.+ ++.+|+|..+.+++..... .+..++.++.|++.||+|+|  +.+..+.+...++
T Consensus        36 ~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~-~g~~i~~~~~g~l~dr~G~r--~~l~~g~~~~~~~  104 (438)
T PRK10133         36 FLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFY-FGYFIIPIPAGILMKKLSYK--AGIITGLFLYALG  104 (438)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHH
Confidence            33333445555668876 8899999999999876554 35678889999999999976  4444444433333

>TIGR00899 2A0120 sugar efflux transporter

Probab=95.39  E-value=0.032  Score=51.50  Aligned_cols=60  Identities=10%  Similarity=-0.085  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        147 SSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       147 ~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      ..++..........++|.|+++++|.|+.+.|++.+...+. ..+..++.|++.||+++|.
T Consensus         5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~Dr~g~r~   64 (375)
T TIGR00899         5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIV-GIAVSQLLATRSDYQGDRK   64 (375)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCCch
Confidence            34455556666778899999999999999999987655443 3455677899999998653

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK10091 MFS transport protein AraJ; Provisional

Probab=95.37  E-value=0.043  Score=51.34  Aligned_cols=73  Identities=7%  Similarity=0.129  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785        140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI  216 (308)
Q Consensus       140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~  216 (308)
                      .++...+..+.....-..+...+|.+ ++++|++..+.|++.+...+ +..++.++.|++.||+++|  +.+..+..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~g~r--~~~~~~~~   76 (382)
T PRK10091          4 VILSLALGTFGLGMAEFGIMGVLTEL-AHDVGISIPAAGHMISYYAL-GVVVGAPIIALFSSRYSLK--HILLFLVA   76 (382)
T ss_pred             hHHHHHHHHHHHHhhHHHHHhChHHH-HHHcCCCHHHHhHHHHHHHH-HHHHHHHHHHHHHccCccH--HHHHHHHH
Confidence            34455555555555556677778875 45799999999988766544 5678899999999999865  44443333

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=95.22  E-value=0.065  Score=50.16  Aligned_cols=64  Identities=14%  Similarity=0.069  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ..+..+...........+...+|.+.+ ++|.|..+.++..+... .+..++.++.|++.||+++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~~~~~~~~~-~~~~~~~~~~G~l~Dr~g~r   68 (392)
T PRK10473          5 LLCSFALVLLYPAGIDMYLVGLPRIAA-DLNASEAQLHIAFSVYL-AGMAAAMLFAGKIADRSGRK   68 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHHHH-HhCCCHHHHHHHHHHHH-HHHHHHHHhHhHHHHHhCCh
Confidence            334444455555566666777888665 58999999988766543 35677889999999999865

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=95.11  E-value=0.068  Score=49.41  Aligned_cols=52  Identities=17%  Similarity=0.224  Sum_probs=38.2

Q ss_pred             HHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        153 LPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       153 ~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .....+...+|. +++++|+|..+.+++.+... .+..++.++.|++.||+++|
T Consensus        19 ~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~d~~g~r   70 (385)
T TIGR00710        19 LGIDMYLPAFPE-IAADLSTPASIVQMTLTLYL-LGFAAGQLLWGPLSDRYGRR   70 (385)
T ss_pred             HHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHH-HHHHHHHHhhhhHHHhcCCh
Confidence            333444445665 45679999999998876554 35678899999999999865

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK09669 putative symporter YagG; Provisional

Probab=95.09  E-value=0.046  Score=52.32  Aligned_cols=61  Identities=15%  Similarity=0.140  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785        144 RTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP  205 (308)
Q Consensus       144 ~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~  205 (308)
                      ..++..........+.+|++.|+.+.+|+|+..+|+++.+..+. -.+..++.|+++||.+.
T Consensus        14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~-dai~dp~~G~lsD~~~~   74 (444)
T PRK09669         14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVL-DAVTDPLMGALVDRTRT   74 (444)
T ss_pred             hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHcccceeeEeeecCCC
Confidence            44444444555666778999999999999999999887655443 35667889999999654

>PRK12307 putative sialic acid transporter; Provisional

Probab=95.09  E-value=0.069  Score=50.47  Aligned_cols=63  Identities=11%  Similarity=0.104  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        142 MYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       142 ~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ....+.........+.....+| ++++++|+|..+.+++.+... .+..++.++.|++.||+++|
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~-~~~~l~~~~~g~l~dr~g~r   83 (426)
T PRK12307         21 FSAWLGYVFDGFDFMLIFYIMY-LIKADLGLTDMEGAFLATAAF-IGRPFGGALFGLLADKFGRK   83 (426)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCh
Confidence            3344444444444444444445 456789999999998776544 45678899999999999865

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=95.05  E-value=0.042  Score=52.09  Aligned_cols=56  Identities=14%  Similarity=0.103  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        150 LHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       150 ~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ........+..+++.|+.+.+|+++.++|+++....+ ..++..++.|+++||.+.|
T Consensus        10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i-~~~i~~p~~G~lsDr~~~r   65 (437)
T TIGR00792        10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARI-LDAITDPIMGNIVDRTRTR   65 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHH-HHHhccchheEeeecCCCC
Confidence            3444555667789999999999999999988765544 3467788999999997543

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=95.03  E-value=0.028  Score=54.06  Aligned_cols=31  Identities=19%  Similarity=0.177  Sum_probs=26.4

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785         21 RESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus        21 ~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      ++++...+..+....+|..+|-.++|.+.+.
T Consensus       120 ~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~  150 (433)
T PF03092_consen  120 ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDS  150 (433)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence            3478888899999999999999999988763

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>TIGR00805 oat sodium-independent organic anion transporter

Probab=94.99  E-value=0.061  Score=54.32  Aligned_cols=73  Identities=21%  Similarity=0.141  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHH
Q psy11785        149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALG  224 (308)
Q Consensus       149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~  224 (308)
                      .+......++....-.-+|++|++++.+.|++.+...+ +..++.++.|++.||++++  +.+.++.+...++.++
T Consensus        42 ~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i-~~~~~~i~v~~~~~r~~r~--~~i~~g~ll~~lg~ll  114 (633)
T TIGR00805        42 QLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEI-GNLLLIIFVSYFGTKLHRP--IVIGIGCAIMGLGSFL  114 (633)
T ss_pred             HHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhH-HHHHHHHHHHHhhcccCcc--eEEEecHHHHHHHHHH
Confidence            34444455666555567899999999999998876654 5677788899999998854  4444444444444433

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=94.94  E-value=0.077  Score=49.94  Aligned_cols=50  Identities=6%  Similarity=-0.233  Sum_probs=36.3

Q ss_pred             HHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        155 IAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       155 ~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ...+...+|. +.+++++|+.+.++..+...+ +..++.++.|++.||+++|
T Consensus        29 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~l~dr~g~r   78 (406)
T PRK15402         29 NDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLA-GGMFLQWLLGPLSDRIGRR   78 (406)
T ss_pred             hhhHhcchHH-HHHHhCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCh
Confidence            3344445565 446799999999887665443 4577888999999999876

>KOG3098|consensus

Probab=94.93  E-value=0.59  Score=45.18  Aligned_cols=41  Identities=15%  Similarity=0.164  Sum_probs=33.1

Q ss_pred             CccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHH
Q psy11785          1 MGQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLG   41 (308)
Q Consensus         1 iG~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG   41 (308)
                      +|+|.+++---.|+.+|.++++..+..++..+..-.+-.+|
T Consensus       114 ~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~G  154 (461)
T KOG3098|consen  114 FGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIG  154 (461)
T ss_pred             hhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhh
Confidence            46777788888999999999999999999887766555443

>PRK03545 putative arabinose transporter; Provisional

Probab=94.82  E-value=0.054  Score=50.76  Aligned_cols=42  Identities=14%  Similarity=0.111  Sum_probs=34.9

Q ss_pred             chhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11785         10 GIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLY   52 (308)
Q Consensus        10 g~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~   52 (308)
                      -.+.+.+..| ++|++++|++.....+|.++||+++|++.+.+
T Consensus       315 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~  356 (390)
T PRK03545        315 MQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL  356 (390)
T ss_pred             HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            3456667655 68899999999999999999999999998753

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=94.75  E-value=0.054  Score=52.68  Aligned_cols=42  Identities=10%  Similarity=0.053  Sum_probs=33.1

Q ss_pred             cchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785          9 LGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus         9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      ...+++.+.+|++.|+..+|+.+....++..++|.+.+++.+
T Consensus       362 ~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~  403 (490)
T PRK10642        362 VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVE  403 (490)
T ss_pred             HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345677889999999999998655566667889988888765

>PRK10429 melibiose:sodium symporter; Provisional

Probab=94.75  E-value=0.074  Score=51.49  Aligned_cols=60  Identities=15%  Similarity=0.087  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhc
Q psy11785        143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKF  203 (308)
Q Consensus       143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~  203 (308)
                      ...++.+........+.+|++.|+.+.+|+++..+|.++....+. -++..++.|+++||.
T Consensus        10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~-dai~dp~~G~lsD~t   69 (473)
T PRK10429         10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIW-DAINDPIMGWIVNNT   69 (473)
T ss_pred             hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHhhchheeehhcC
Confidence            444555556666777888999999999999999999887654433 356677889999965

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=94.73  E-value=0.11  Score=51.19  Aligned_cols=76  Identities=11%  Similarity=0.015  Sum_probs=55.9

Q ss_pred             HhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHH
Q psy11785        134 RLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAW  213 (308)
Q Consensus       134 ~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~  213 (308)
                      .-||||.|..+-++..+...+......-++-++. +..-|+...+++.....+|..+ -.+++|.+.||+++|  +++..
T Consensus         5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~L-lsl~aG~laDr~drr--rili~   80 (524)
T PF05977_consen    5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILL-LSLFAGALADRFDRR--RILIL   80 (524)
T ss_pred             ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHhhcccch--HHHHH
Confidence            4578999988888888888887777777776654 4556777778777666677544 457899999999865  44443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=94.70  E-value=3.4  Score=39.38  Aligned_cols=171  Identities=16%  Similarity=0.183  Sum_probs=89.2

Q ss_pred             hhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy11785         11 IPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAM   90 (308)
Q Consensus        11 ~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~   90 (308)
                      .+||--.+++++--++.+..-++..+|-.+|.++|=.+...-            +.+.   -.+.++-.+.. .+..+..
T Consensus       115 ~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~------------~~sy---~~L~~isl~~~-~~a~~~~  178 (412)
T PF01770_consen  115 YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG------------GVSY---FQLNYISLASV-SLALLIA  178 (412)
T ss_pred             HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------CCCH---HHHHHHHHHHH-HHHHHHH
Confidence            578888999999999999888888888888888887776531            0111   12223323222 2222333


Q ss_pred             HhccCCCCCCCCccCC--------cccccCCCcccc------ccCCC------CCCcchHHHHHhhcChHHHHHHHHHHH
Q psy11785         91 FMFPKTLTKASPVNGT--------TTVATLPTKKES------NQKNP------SLKDFPKAVKRLLKNDILMYRTASSVL  150 (308)
Q Consensus        91 ~~~p~~~p~~~~~~~~--------~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~Ll~n~~f~~~~l~~~~  150 (308)
                      +++|+..+..--.+..        .+.+..++..++      ++...      ..+.+.+.+++..+||.++.-++-..+
T Consensus       179 ~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~  258 (412)
T PF01770_consen  179 LFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAF  258 (412)
T ss_pred             HHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence            5566632211000100        000000000000      00000      012345667778889999888888777


Q ss_pred             HHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhh---hhhHHHhhhhhee
Q psy11785        151 HILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGI---LVMGIGIILSGVF  199 (308)
Q Consensus       151 ~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i---~~~~iG~~lgG~l  199 (308)
                      ...+.+-...+.....++.  -+......+-|.+-.   ..+.++++..|++
T Consensus       259 atcgy~qv~nYvQ~LW~~v--~~~~~~~vYNG~VeA~~tllgA~~al~~g~v  308 (412)
T PF01770_consen  259 ATCGYYQVINYVQSLWDTV--PPSDNESVYNGAVEAASTLLGAIAALLAGYV  308 (412)
T ss_pred             HHhHHHHHHHHHHHHHHhc--CCCCCCcccchHHHHHHHHHHHHHHHHHhHh
Confidence            7777776666666655554  222222222222211   1234456677777

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>TIGR00895 2A0115 benzoate transport

Probab=94.70  E-value=0.066  Score=49.48  Aligned_cols=56  Identities=13%  Similarity=0.192  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +........+...+|.+ .+++|+++.+.+++.+... .+.+++.++.|++.||+++|
T Consensus        27 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~   82 (398)
T TIGR00895        27 LMDGYDLAAMGFAAPAI-SAEWGLDPVQLGFLFSAGL-IGMAFGALFFGPLADRIGRK   82 (398)
T ss_pred             HHHHHHHHHHHhhHHHH-hhccCCCHHHHHHHHHHHH-HHHHHHHHHhHHHHHHhhhH
Confidence            33333344455556654 4569999999998776544 35678899999999999854

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=94.70  E-value=0.063  Score=52.37  Aligned_cols=45  Identities=9%  Similarity=-0.019  Sum_probs=39.5

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      ..++..++..|.+|.+.|++.+|+.+....+|.+++|.+.+++.+
T Consensus       409 ~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~  453 (502)
T TIGR00887       409 PNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQ  453 (502)
T ss_pred             CCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence            345667788999999999999999999999999999999998765

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00900 2A0121 H+ Antiporter protein

Probab=94.69  E-value=0.063  Score=48.98  Aligned_cols=59  Identities=12%  Similarity=0.121  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        146 ASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       146 l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ++.++...........+|.|.++ ++.++.+.+++.....+ +.+++.++.|++.||+++|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~-~~~i~~~~~G~l~dr~g~r   64 (365)
T TIGR00900         6 AAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGML-PYVVLSPIAGALADRYDRK   64 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHH-HHHHHHHhhhHHHHhhchh
Confidence            44455555556666778887765 78999999987765544 4567788999999999865

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=94.61  E-value=0.17  Score=48.82  Aligned_cols=51  Identities=14%  Similarity=0.143  Sum_probs=38.6

Q ss_pred             HHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        155 IAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       155 ~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      -..+...+|. +++.+|++..+.|++.+...+ +..++.+++|++.||+++|.
T Consensus        45 r~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~g~r~   95 (467)
T PRK09556         45 RKNFKAAQND-MISTYGLSTTELGMIGLGFSI-TYGVGKTLVGYYADGKNTKQ   95 (467)
T ss_pred             hcChhhhhHH-HHHhcCCCHHHHHHHHHHHHH-HHHHHHhhhhhHhhccCccc
Confidence            3345555776 556799999999988765543 56788999999999999763

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=94.55  E-value=1.6  Score=42.42  Aligned_cols=175  Identities=9%  Similarity=0.078  Sum_probs=83.7

Q ss_pred             hhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy11785         12 PYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMF   91 (308)
Q Consensus        12 a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~   91 (308)
                      .+..|..+.+|..|..+.+++...++-.++-.+-+++.+.- |     .+.++.-+ + .-|..+++.+..+++..+...
T Consensus       171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~-~-----~~~~~~~~-~-~~~~~~~vi~~~~~i~~~l~~  242 (509)
T COG3202         171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR-D-----ALASEFKD-L-LLQILFIVIVILGIIAILLYR  242 (509)
T ss_pred             HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch-h-----hHhHHHHH-H-HHHHHHHHHHHHHHHHHHHHH
Confidence            45567788889999999888777666655555555444310 0     00011001 1 135556666665555544444


Q ss_pred             hccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHh
Q psy11785         92 MFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGL-YTFLPKYFETQF  170 (308)
Q Consensus        92 ~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~-~~~~P~yl~~~~  170 (308)
                      +.-|...+.+.....+       ...+++.+.+. .+....+.++|+|-....++...+.+....-+ .+|-.+ .+..+
T Consensus       243 ~~~r~il~~~~f~~~~-------~~kk~~~k~k~-~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~-ik~~~  313 (509)
T COG3202         243 YINRNVLTDPLFYLRA-------KKKKKKKKLKL-GLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSG-IKELY  313 (509)
T ss_pred             HHHhhcccCcchhHHH-------hcccccccccC-cHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHhc
Confidence            4444433322210000       00000111112 35567788888887665555444433333222 112222 22222


Q ss_pred             CCCcccc------cccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        171 RLPSHTA------NMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       171 gls~~~a------gl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .-+....      .+++|   +...++....+|-+++|.|.-
T Consensus       314 ~~~~~~~~f~~~~~~~tg---vv~~v~~~~~~s~~ir~~GW~  352 (509)
T COG3202         314 PTTNEYTAFMGRFQIWTG---VVSLVVFLFPGSNLIRRVGWF  352 (509)
T ss_pred             CChhHHHHHHHHHHHHHH---HHHHHHHHhhhHHHHHHhhHH
Confidence            2222211      12333   223456678899999998854

>TIGR00788 fbt folate/biopterin transporter

Probab=94.55  E-value=0.1  Score=50.70  Aligned_cols=77  Identities=16%  Similarity=0.210  Sum_probs=54.4

Q ss_pred             cchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHH
Q psy11785          9 LGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAV   88 (308)
Q Consensus         9 lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i   88 (308)
                      ....++.+..|+++++...|++.+...+|..+|+.+||++.+.+ +      ++.++-+..  |. ..+++.+..++...
T Consensus       371 ~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~-g------~~~~~~~~~--~~-~i~i~~~~~l~~l~  440 (468)
T TIGR00788       371 PFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI-G------ITCDNSNNL--WL-LILGHSLAPLLPLP  440 (468)
T ss_pred             cHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc-C------CCcccccch--HH-HHHHHHHHHHHHHH
Confidence            34788899999999999999999999999999999999998754 2      222222221  33 34455555555444


Q ss_pred             HHHhccC
Q psy11785         89 AMFMFPK   95 (308)
Q Consensus        89 ~~~~~p~   95 (308)
                      .++++|+
T Consensus       441 ~~~llP~  447 (468)
T TIGR00788       441 LLHLLPR  447 (468)
T ss_pred             HHHhCCC
Confidence            4556776

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=94.48  E-value=0.09  Score=56.40  Aligned_cols=72  Identities=14%  Similarity=0.074  Sum_probs=48.0

Q ss_pred             HhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCccc--ccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        134 RLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHT--ANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       134 ~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~--agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .+++++.|....++.++..+...++...+..++...++.+.+.  .+++.++..+ +.+++.+++|+++||+++|
T Consensus         4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~~~G~l~Dr~grk   77 (1146)
T PRK08633          4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLL-PFLLLSSPAGFLADKFSKN   77 (1146)
T ss_pred             chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHH-HHHHHhhhHhhhcccccHH
Confidence            4567777777777777766666666666666666667665433  3444443333 3567888999999999865

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=94.16  E-value=0.083  Score=51.45  Aligned_cols=50  Identities=10%  Similarity=0.046  Sum_probs=46.2

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLY   52 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~   52 (308)
                      -++.++...+++.+..|+++.+.++|++....-....+||++-|.+.+..
T Consensus       394 ~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t  443 (477)
T PF11700_consen  394 MGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT  443 (477)
T ss_pred             hhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            46788999999999999999999999999999999999999999998753

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=94.10  E-value=0.094  Score=50.39  Aligned_cols=41  Identities=7%  Similarity=-0.031  Sum_probs=34.5

Q ss_pred             ccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q psy11785          8 TLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFC   48 (308)
Q Consensus         8 ~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~l   48 (308)
                      |...+++.|.+|+++|++++|+..+...+|.++|+.+...+
T Consensus       383 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~  423 (479)
T PRK10077        383 PVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMM  423 (479)
T ss_pred             chhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            66788999999999999999999998888888886665544

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=94.06  E-value=0.17  Score=48.60  Aligned_cols=62  Identities=13%  Similarity=0.101  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ...++.+............+|.+. +++|.++.+.+++.....+ +.+++.++.|++.||+++|
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~r   67 (485)
T TIGR00711         6 VLMLGTFMAVLDSTIVNVAIPTIA-GDLGSSLSQVQWVITSYML-ANAISIPLTGWLAKRFGTR   67 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhhhhHHHHHHHH-HHHHHHHhHHHHHHHhCcH
Confidence            344444555555555666778765 4689999999988765544 4678889999999999865

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=94.03  E-value=0.14  Score=47.85  Aligned_cols=56  Identities=11%  Similarity=0.100  Sum_probs=42.9

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +........+..++|.|+++ +|.|.++.|++.+...+ ..+++.++.|.+.||++++
T Consensus        14 ~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l-~~~l~~~~~g~l~dr~g~~   69 (382)
T PRK11128         14 FGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLV-ARFLGSLLIAPRVKDPSQL   69 (382)
T ss_pred             HHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHH-HHHhhhHHHHHHHhhhcch
Confidence            34445556677788999965 79999999998876554 3467788899999999864

>PRK09952 shikimate transporter; Provisional

Probab=93.96  E-value=0.076  Score=50.86  Aligned_cols=72  Identities=7%  Similarity=0.146  Sum_probs=49.7

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHH-HHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIG-VRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLML   85 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~-~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll   85 (308)
                      .+...+++.|.+|++.|+...|+.+. +..+|.+++|.+.+++.+...                +.|...|++.++..++
T Consensus       361 ~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~----------------~~~~~~~~~~~~~~~i  424 (438)
T PRK09952        361 VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG----------------GSWHSVAIYLLAGCLI  424 (438)
T ss_pred             HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC----------------CCchHHHHHHHHHHHH
Confidence            45567889999999999988888654 455899999999999876421                1255556666555555


Q ss_pred             HHHHHHhcc
Q psy11785         86 AAVAMFMFP   94 (308)
Q Consensus        86 ~~i~~~~~p   94 (308)
                      .++..+..+
T Consensus       425 ~~v~~~~~~  433 (438)
T PRK09952        425 SAMTALLMK  433 (438)
T ss_pred             HHHHHHHcc
Confidence            544444443

>TIGR00883 2A0106 metabolite-proton symporter

Probab=93.93  E-value=0.02  Score=52.80  Aligned_cols=48  Identities=0%  Similarity=-0.194  Sum_probs=40.0

Q ss_pred             cccccchhhhcCccCCCCchhHHHHH-HHHHHHHHHHHHHHHHhhhccc
Q psy11785          5 AVYTLGIPYIDDNVANRESPLYFAIT-IGVRILGPSLGFILGSFCTRLY   52 (308)
Q Consensus         5 ~~~~lg~a~i~d~~~~~~~~~~~gi~-~~~~~~Gp~lG~~lGg~ll~~~   52 (308)
                      ..++...+++.|.+|+++|+++.++. .....+|..+||.++|++.+.+
T Consensus       328 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~  376 (394)
T TIGR00883       328 MYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT  376 (394)
T ss_pred             HHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence            45567788999999999999999984 4566789999999999998753

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=93.76  E-value=0.2  Score=47.21  Aligned_cols=61  Identities=13%  Similarity=0.084  Sum_probs=41.1

Q ss_pred             HHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHH
Q psy11785        156 AGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVL  220 (308)
Q Consensus       156 ~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~  220 (308)
                      +.....+|.+ .+++|+++++.++..+...+ +..++.++.|++.||+++|  +.+..+.+...+
T Consensus        37 ~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~Dr~grr--~~~~~~~~~~~~   97 (394)
T PRK10213         37 FLPVSLLTPM-AQDLGISEGVAGQSVTVTAF-VAMFASLFITQTIQATDRR--YVVILFAVLLTL   97 (394)
T ss_pred             HHHHhhHHHH-HHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHhcccCcH--HHHHHHHHHHHH
Confidence            3444456664 45799999999987765544 4567888999999999865  444444443333

>KOG3762|consensus

Probab=93.70  E-value=0.13  Score=50.14  Aligned_cols=77  Identities=13%  Similarity=0.187  Sum_probs=56.1

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHH-HHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIG-VRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~-~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      +.+|....+|+.+..||+-++.+.|++.. .-.+|-.+|-++||.+...+.                  =+..|-+.++.
T Consensus       474 aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg------------------~~ttf~~~giA  535 (618)
T KOG3762|consen  474 ALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG------------------ARTTFRIFGIA  535 (618)
T ss_pred             HHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh------------------hHHHHHHHHHH
Confidence            45677889999999999999999999875 558899999999999987541                  14556666666


Q ss_pred             HHHHHHHHHhccCCCC
Q psy11785         83 LMLAAVAMFMFPKTLT   98 (308)
Q Consensus        83 ~ll~~i~~~~~p~~~p   98 (308)
                      .+++.+.+....+.++
T Consensus       536 cl~~l~~~~~iq~~l~  551 (618)
T KOG3762|consen  536 CLVTLALFISIQLLLK  551 (618)
T ss_pred             HHHHHHHHHHhhhhhc
Confidence            6555544444444333

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=93.58  E-value=0.15  Score=49.04  Aligned_cols=64  Identities=16%  Similarity=0.132  Sum_probs=45.1

Q ss_pred             hcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy11785         14 IDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMF   93 (308)
Q Consensus        14 i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~   93 (308)
                      ..|..| +.++...|+.+....+|+.++|.+.|++.+..              .| +.|+..|.+.++..++..+....+
T Consensus       386 ~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~--------------~~-~~~~~~f~~~~~~~~i~~i~~~~~  449 (465)
T TIGR00894       386 SLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQD--------------SK-NVWLIVFLIMAFVNILCVIFYLIF  449 (465)
T ss_pred             hhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCC--------------Cc-hHHHHHHHHHHHHHHHHHHHeeee
Confidence            335554 47888889998888888888888888765421              23 568889998887776655544433

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=93.35  E-value=0.073  Score=50.41  Aligned_cols=50  Identities=14%  Similarity=0.112  Sum_probs=46.1

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLY   52 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~   52 (308)
                      -++.+....+|+.+++|++|.++++|++....-.+..+||.+-+.+.+..
T Consensus       355 ~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT  404 (438)
T COG2270         355 LGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT  404 (438)
T ss_pred             cchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh
Confidence            36788899999999999999999999999999999999999999988764

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=93.15  E-value=0.13  Score=47.57  Aligned_cols=57  Identities=16%  Similarity=0.116  Sum_probs=41.3

Q ss_pred             HHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785        156 AGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI  216 (308)
Q Consensus       156 ~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~  216 (308)
                      ..+...+|.+.+ ++|+|+.+.+++.+...+ +..++.++.|++.||+++|  +.+..+.+
T Consensus         8 ~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~--~~~~~~~~   64 (377)
T PRK11102          8 DMYLPALPVIAA-DFGVSAGSVQMTLSAYIL-GFAIGQLFYGPMADSFGRK--PVILGGTL   64 (377)
T ss_pred             HHHhccHHHHHH-HhCCCHHHHHHHHHHHHH-HHHHHHHhhchHHhhcCCh--HHHHHHHH
Confidence            345567788776 589999999988766544 4678899999999999854  44443333

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=92.70  E-value=0.34  Score=45.29  Aligned_cols=60  Identities=12%  Similarity=0.094  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785        144 RTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP  205 (308)
Q Consensus       144 ~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~  205 (308)
                      ..+..+..+.....+..++|.|+++ +|+|..+.|++.+...+ ...++.++.|.+.||+++
T Consensus         9 l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~-~~~~~~~~~g~l~d~~~~   68 (382)
T TIGR00902         9 LALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALI-ARFAGGLFFAPLIKDANH   68 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCc
Confidence            3344455555556677789999974 79999999998765543 446677888999999875

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=92.46  E-value=0.55  Score=44.69  Aligned_cols=81  Identities=14%  Similarity=0.169  Sum_probs=57.2

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHH
Q psy11785        138 NDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT  217 (308)
Q Consensus       138 n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~  217 (308)
                      -..|....++....+..=-.|..-.|. +.++.++|.++.|++.+...+ +-.++-++.|.++||.++|  ..+.++++.
T Consensus        28 ~qif~~~fiGYa~fYl~RknF~~a~p~-l~e~~~lsk~~lG~i~s~f~i-~YG~sKf~~G~~sDr~npr--~fm~~gLil  103 (448)
T COG2271          28 IQIFLSIFIGYAAFYLTRKNFNLAMPA-LIEDGGLSKTQLGILGSAFSI-TYGVSKFVMGVLSDRSNPR--YFMAFGLIL  103 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhhccHH-HHHhcCCCHHHHHHHHHHHHH-HHHHHHHHhhhhcccCCCc--eeehHHHHH
Confidence            356666666666666666677777775 555788999999988766544 5678999999999999866  544444444


Q ss_pred             HHHHH
Q psy11785        218 AVLYA  222 (308)
Q Consensus       218 ~~~~~  222 (308)
                      +.+..
T Consensus       104 sai~n  108 (448)
T COG2271         104 SAIVN  108 (448)
T ss_pred             HHHHH
Confidence            44443

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=92.18  E-value=0.39  Score=45.60  Aligned_cols=48  Identities=8%  Similarity=-0.162  Sum_probs=36.1

Q ss_pred             HHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       158 ~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      +..-+|. +.++++.+..++++..+... .+..++.++.|++.||+|+|.
T Consensus        35 ~~p~l~~-i~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~G~l~dr~Grr~   82 (413)
T PRK15403         35 IQPGIIN-VVRDFNADVSLAPASVSLYL-AGGMALQWLLGPLSDRIGRRP   82 (413)
T ss_pred             hccCHHH-HHHHhCCCHHHHHHHHHHHH-HHHHHHHHhhhHHHHHcCchH
Confidence            3334454 56689999999988776654 356788899999999999763

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=92.03  E-value=0.43  Score=44.89  Aligned_cols=51  Identities=20%  Similarity=0.105  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhcc
Q psy11785        150 LHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFK  204 (308)
Q Consensus       150 ~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~  204 (308)
                      .......-....+|.|++++ |+|.++.|++.. +..|  .+..++.|.++||++
T Consensus        10 ~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~-~~~~--~~~~~l~g~~~Dr~~   60 (402)
T PRK11902         10 ASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSL-VGQA--YIFKFLWAPLMDRYT   60 (402)
T ss_pred             HHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHH-HHHH--HHHHHHHHHHHHccc
Confidence            34444555667899999976 999999998743 4444  467789999999993

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=91.94  E-value=0.49  Score=46.07  Aligned_cols=64  Identities=9%  Similarity=0.002  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        141 LMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +....++.+....-.....+-+|.+. +.+|.+..+.+++.....+ +..++.+..|++.||+|+|
T Consensus         8 ~~~~~~~~~~~~ld~tiv~~a~p~i~-~~l~~s~~~~~~~~~~~~l-~~~~~~~~~G~l~D~~Grk   71 (495)
T PRK14995          8 LVIIVLVYIPVAIDATVLHVAAPTLS-MTLGASGNELLWIIDIYSL-VMAGMVLPMGALGDRIGFK   71 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhccH
Confidence            34444555555555556777789875 5699999999887765544 4566778899999999876

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=91.43  E-value=0.63  Score=45.09  Aligned_cols=78  Identities=17%  Similarity=0.106  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC----CCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785        141 LMYRTASSVLHILPIAGLYTFLPKYFETQFR----LPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI  216 (308)
Q Consensus       141 f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~g----ls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~  216 (308)
                      +..+...-+.+-+.+||+-.-+-.|++.+++    ++.++|.-+++...-. .=+-.++|||+.||+-- .|+.+.++.+
T Consensus        23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~sl-VY~t~i~GG~laDr~LG-~~~tI~lGai  100 (498)
T COG3104          23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSL-VYLTPIIGGWLADRVLG-TRRTIVLGAI  100 (498)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHH-HHHHHHHHHHHHHHhcc-hhHHHHHHHH
Confidence            4455566788999999999999999999999    9998887665543321 12356789999999732 2344444433


Q ss_pred             HHHH
Q psy11785        217 TAVL  220 (308)
Q Consensus       217 ~~~~  220 (308)
                      ...+
T Consensus       101 l~~i  104 (498)
T COG3104         101 LMAI  104 (498)
T ss_pred             HHHH
Confidence            3333

>KOG4578|consensus

Probab=91.42  E-value=0.075  Score=48.07  Aligned_cols=34  Identities=41%  Similarity=1.001  Sum_probs=27.2

Q ss_pred             ccCCCCCCCccCCCCCcceeeCCCCceecCccc---cccccc
Q psy11785        251 EPMCATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNI  289 (308)
Q Consensus       251 ~~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~---AGC~~~  289 (308)
                      .+.||-+    |+.++ .|||++||.||-|-||   |-|.+-
T Consensus        31 d~~c~l~----C~~~~-kPvCasDGrty~srCe~qRAkC~dp   67 (421)
T KOG4578|consen   31 DAACQLE----CDDNE-KPVCASDGRTYPSRCELQRAKCGDP   67 (421)
T ss_pred             chhhccc----cCCCC-CCccccCCccchhHHHHHHhhcCCC
Confidence            4678877    55555 8999999999999998   778754

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=91.02  E-value=0.24  Score=46.30  Aligned_cols=73  Identities=18%  Similarity=0.296  Sum_probs=54.2

Q ss_pred             ccccccccchhhhcCccCCC---CchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANR---ESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVL   78 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~---~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii   78 (308)
                      |.+.+=|...+++.|-++++   +|-.+..+++.+..+|..+++.+-+++-+.+                  +|+.+|.+
T Consensus        46 G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~------------------~~~~~f~i  107 (372)
T PF00854_consen   46 GTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY------------------GWFLGFGI  107 (372)
T ss_dssp             HHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-------------------HHHHHHH
T ss_pred             ccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc------------------chhhhhhH
Confidence            55666677778888988766   3556777889999999999999988876533                  48999999


Q ss_pred             HHHHHHHHHHHHHh
Q psy11785         79 VAVFLMLAAVAMFM   92 (308)
Q Consensus        79 ~g~~~ll~~i~~~~   92 (308)
                      .++..++..+.++.
T Consensus       108 ~~~~~~~~~~~f~~  121 (372)
T PF00854_consen  108 PAIGMLLALIVFLS  121 (372)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHh
Confidence            88776655444433

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>PRK11010 ampG muropeptide transporter; Validated

Probab=90.91  E-value=0.35  Score=47.21  Aligned_cols=70  Identities=7%  Similarity=0.034  Sum_probs=51.3

Q ss_pred             ccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q psy11785          8 TLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAA   87 (308)
Q Consensus         8 ~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~   87 (308)
                      +...+++.+.++++.++...|++++...+|.++++.++|++.+.+                  +|...|.+.+++.++..
T Consensus       335 ~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~------------------G~~~~f~~~~~~~l~~l  396 (491)
T PRK11010        335 AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH------------------GWPTFYLFSVAAAVPGL  396 (491)
T ss_pred             HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------ChHHHHHHHHHHHHHHH
Confidence            344677788899999999999999999999998888899887642                  25666766666655554


Q ss_pred             HHHHhccC
Q psy11785         88 VAMFMFPK   95 (308)
Q Consensus        88 i~~~~~p~   95 (308)
                      +.....++
T Consensus       397 ~~~~~~~~  404 (491)
T PRK11010        397 LLLLVCRQ  404 (491)
T ss_pred             HHHHHHHh
Confidence            44444444

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=90.78  E-value=0.37  Score=45.15  Aligned_cols=44  Identities=5%  Similarity=-0.165  Sum_probs=38.3

Q ss_pred             ccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy11785          6 VYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCT   49 (308)
Q Consensus         6 ~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll   49 (308)
                      .++...++..|.+|++.|+...|+.+....+|.+++|++.+.++
T Consensus       297 ~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~  340 (368)
T TIGR00903       297 AYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI  340 (368)
T ss_pred             hHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence            34556688999999999999999999999999999998888776

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK11462 putative transporter; Provisional

Probab=90.69  E-value=0.66  Score=44.83  Aligned_cols=63  Identities=10%  Similarity=0.099  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ..-++..........+.+|++.|+.+..|+++..+|.++.+.-+.- ++--++-|+++||.+.|
T Consensus        13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~D-ai~Dp~~G~~~D~t~~r   75 (460)
T PRK11462         13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALD-AISDPCMGLLADRTRSR   75 (460)
T ss_pred             hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHH-HHHhhhheehhccCCCC
Confidence            3445555555666667789999999999999999998765443332 45567779999987544

>PTZ00207 hypothetical protein; Provisional

Probab=90.68  E-value=0.84  Score=45.69  Aligned_cols=66  Identities=11%  Similarity=0.096  Sum_probs=42.6

Q ss_pred             HHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHH
Q psy11785        151 HILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLY  221 (308)
Q Consensus       151 ~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~  221 (308)
                      .....|++..+.|. +++++|+|..+.+++.+. ... ..+..+++|++.||+++|  ..+.++.+...++
T Consensus        39 ~~g~~y~fsv~s~~-L~~~lgls~~~l~~i~sv-g~~-~g~~~lp~G~L~Dr~G~R--~vllig~ll~~iG  104 (591)
T PTZ00207         39 CTSFMYAFNLISGA-MQARYNLTQRDLSTITTV-GIA-VGYFLLPYSFIYDYLGPR--PIFVLSMTVFCLG  104 (591)
T ss_pred             HHHHHHHHHHHHHH-HHHHhCcCHHHHHHHHHH-HHH-HHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHH
Confidence            34456677777774 688899999998887653 222 223455789999999966  4444444433333

>KOG2615|consensus

Probab=90.46  E-value=0.3  Score=45.89  Aligned_cols=63  Identities=14%  Similarity=0.162  Sum_probs=47.9

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHH
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLV   79 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~   79 (308)
                      .|--..++....|.++||..+|+..+...++-++||+++|.+..+-         ..+++.|+ +||.-+++.
T Consensus       370 vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws---------~~~~~a~~-~~~~L~~~~  432 (451)
T KOG2615|consen  370 VTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS---------QGAQPAYI-AWGALLLIP  432 (451)
T ss_pred             hHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe---------cCCCceee-ehHHHHHHH
Confidence            3445667777889999999999999999999999999999887642         23455564 577655443

>PRK15075 citrate-proton symporter; Provisional

Probab=90.30  E-value=1  Score=42.97  Aligned_cols=64  Identities=13%  Similarity=0.165  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccc-hhhh----hhhhHHHhhhhheehhhccCC
Q psy11785        142 MYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVS-GVGG----ILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       142 ~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~-g~~~----i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ....++.++.+.-...+....|. +.++++.+..+.+.+. +...    ..+..+|.++.|++.||+|+|
T Consensus        18 ~~~~~~~~~~~~d~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr   86 (434)
T PRK15075         18 LRVTSGNFLEMFDFFLFGFYATA-IAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR   86 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH
Confidence            34555666666666777777785 5556888777654322 1111    111246788899999999965

>TIGR00806 rfc RFC reduced folate carrier

Probab=90.16  E-value=1.1  Score=43.58  Aligned_cols=47  Identities=13%  Similarity=0.084  Sum_probs=37.1

Q ss_pred             hHHHHHHHHHhCCCccc-ccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        160 TFLPKYFETQFRLPSHT-ANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       160 ~~~P~yl~~~~gls~~~-agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      .+...++.+.+|+|..+ .|.+.+.... +..+..+.+|++.||+|.|.
T Consensus        46 s~a~p~L~~elglT~~qv~G~I~s~F~y-sYal~qIp~GlLaDrlG~K~   93 (511)
T TIGR00806        46 SFITPYLLTVLNFTEETVTNEIIPVLPY-SHLAVLVPVFLLTDYLRYKP   93 (511)
T ss_pred             HHHHHHHHHHcCCCHHHhcchHHHHHHH-HHHHHHHHHHHHHHHhCchH
Confidence            33444787899999999 8888765543 56788999999999998763

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PF13347 MFS_2: MFS/sugar transport protein

Probab=89.94  E-value=0.34  Score=46.11  Aligned_cols=57  Identities=18%  Similarity=0.149  Sum_probs=40.7

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehh----hccCC
Q psy11785        149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFIL----KFKPN  206 (308)
Q Consensus       149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~----r~~~~  206 (308)
                      +........+.+++++|+.++.|+++..+|++.....+.. ++-.++-|+++|    |+|+|
T Consensus        11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~d-ai~dp~~G~~sDr~~tr~Grr   71 (428)
T PF13347_consen   11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWD-AITDPLIGYLSDRTRTRWGRR   71 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhh-hhcCCcEEEEEeeeccccccc
Confidence            3444455567779999999999999999998765444333 344567899999    55644

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=89.63  E-value=1.1  Score=42.57  Aligned_cols=71  Identities=15%  Similarity=0.033  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhC---CCccccc---ccchhhhhhhhHHHhhhhheehhhccCCccchhHHHH
Q psy11785        142 MYRTASSVLHILPIAGLYTFLPKYFETQFR---LPSHTAN---MVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIA  215 (308)
Q Consensus       142 ~~~~l~~~~~~~~~~~~~~~~P~yl~~~~g---ls~~~ag---l~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~  215 (308)
                      +...++..++..-...+....| ++.++++   .+..+.+   ..++ ....+..+|.+++|++.||+|+|  +.+..++
T Consensus        25 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ig~~~~G~l~Dr~Grr--~~l~~~~  100 (432)
T PRK10406         25 VGASSGNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFA-AGFLMRPIGGWLFGRIADKHGRK--KSMLISV  100 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCcH--HHHHHHH
Confidence            3444556666665555444444 6666664   4444322   2222 22334468999999999999966  4444433


Q ss_pred             H
Q psy11785        216 I  216 (308)
Q Consensus       216 ~  216 (308)
                      +
T Consensus       101 ~  101 (432)
T PRK10406        101 C  101 (432)
T ss_pred             H
Confidence            3

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=89.49  E-value=0.41  Score=44.78  Aligned_cols=41  Identities=10%  Similarity=0.041  Sum_probs=33.8

Q ss_pred             hhhhcCccCC-CCchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11785         11 IPYIDDNVAN-RESPLYFAITIGVRILGPSLGFILGSFCTRL   51 (308)
Q Consensus        11 ~a~i~d~~~~-~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~   51 (308)
                      .+++.+..++ ++++..++..++...+|.++||.++|++.+.
T Consensus       325 ~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~  366 (390)
T TIGR02718       325 YTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR  366 (390)
T ss_pred             HHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444455555 8899999999999999999999999998764

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR00896 CynX cyanate transporter

Probab=89.46  E-value=0.38  Score=44.23  Aligned_cols=47  Identities=13%  Similarity=0.227  Sum_probs=36.9

Q ss_pred             HHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        158 LYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       158 ~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +...+|.+ ++.+|+|.++++++.+... .+..++.++.|++.||+++|
T Consensus        19 ~~~~lp~l-~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~g~r   65 (355)
T TIGR00896        19 VGPLLPQI-RSALGMSFSVAGLLTALPV-LCFAVLAPLAPWLARRFGEE   65 (355)
T ss_pred             CcccHHHH-HHHhCCCHHHHHHHHHHHH-HHHHHHHHhHHHHHHHhCch
Confidence            34466764 4579999999999876554 45688899999999999976

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>KOG0637|consensus

Probab=89.24  E-value=3.5  Score=39.74  Aligned_cols=41  Identities=17%  Similarity=0.161  Sum_probs=34.6

Q ss_pred             ccchhhhcCccCCCCchh-HHHHHHHHHHHHHHHHHHHHHhh
Q psy11785          8 TLGIPYIDDNVANRESPL-YFAITIGVRILGPSLGFILGSFC   48 (308)
Q Consensus         8 ~lg~a~i~d~~~~~~~~~-~~gi~~~~~~~Gp~lG~~lGg~l   48 (308)
                      .-..+++.|...++++.+ +.+.+..+.++|.++|+.+|++.
T Consensus       161 gp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~  202 (498)
T KOG0637|consen  161 GPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL  202 (498)
T ss_pred             hhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence            345788999987776666 99999999999999999999844

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=88.75  E-value=0.57  Score=50.49  Aligned_cols=47  Identities=6%  Similarity=-0.148  Sum_probs=40.6

Q ss_pred             ccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785          4 TAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus         4 a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      +...+...+++.+.+|++++|+++|+.++...+|.++|++++|.+..
T Consensus       349 ~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~  395 (1140)
T PRK06814        349 GLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA  395 (1140)
T ss_pred             HHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445567888999999999999999999999999999999998864

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=88.74  E-value=1.6  Score=42.57  Aligned_cols=57  Identities=16%  Similarity=0.114  Sum_probs=40.7

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhh----ccCCc
Q psy11785        149 VLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILK----FKPNA  207 (308)
Q Consensus       149 ~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r----~~~~~  207 (308)
                      .-..+.+.....+++.|++ .+|+++..++++.....+ ..++..++.|+++||    +|+|+
T Consensus        14 ~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l-~~~i~~Pi~G~lSDr~~sr~GRRr   74 (477)
T TIGR01301        14 AGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPL-SGLLVQPLVGYLSDRCTSRFGRRR   74 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH-HHHHHHhHeeehhcCCCCCCCChH
Confidence            3344555666677787875 599999999887655444 456778899999995    77653

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=88.58  E-value=1.1  Score=43.45  Aligned_cols=74  Identities=12%  Similarity=0.127  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHH
Q psy11785        143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAIT  217 (308)
Q Consensus       143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~  217 (308)
                      ..-++-+...........|+.+|+.+.+|+++..+|.++.+.-+.= ++.-++-|.++||.+.|.-|-.-|.+..
T Consensus        16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiD-Ai~DP~~G~i~D~t~~r~GrfRP~lL~g   89 (467)
T COG2211          16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIID-AITDPIMGFIVDRTRSRWGRFRPWLLWG   89 (467)
T ss_pred             hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHH-HHhcchheeeecccccccccccHHHHHH
Confidence            3444445555666667889999999999999999999887665543 4566788999998875543433444443

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=87.95  E-value=0.99  Score=33.04  Aligned_cols=65  Identities=15%  Similarity=0.090  Sum_probs=43.2

Q ss_pred             HHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHH
Q psy11785        155 IAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYAL  223 (308)
Q Consensus       155 ~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~  223 (308)
                      =+.|.-.+|. ++++.++|.+++|++.+.. ..+..+|.++..++.++.  +.++..+.+++...++.+
T Consensus         8 RFayTplLP~-M~~~~~ls~~~ag~lasaN-y~GYL~GAl~~~~~~~~~--~~~~~~~~~l~~~~~~~~   72 (85)
T PF06779_consen    8 RFAYTPLLPL-MQADGGLSLSQAGWLASAN-YLGYLVGALLASRLPRHS--RPRRLLRAGLLLTVLSTA   72 (85)
T ss_pred             HHHHHhHhHH-HHHhcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHH
Confidence            3455556775 5667899999999876543 456778888877776653  334566666665555543

Note that many members are hypothetical proteins.

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=87.12  E-value=2.2  Score=40.47  Aligned_cols=65  Identities=9%  Similarity=0.091  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .++...++....+.+++-+....+ .+.+.+++|+.|.+++.....+.+ .+--+.-|.+.||+|.|
T Consensus        15 ~L~~S~~af~v~F~VW~l~s~l~~-~i~~~~~LS~~q~~ll~aiPil~G-allRl~~g~l~drfGgR   79 (417)
T COG2223          15 NLWLSTLAFDVGFMVWTLFSPLGV-FIKSDFGLSEGQKGLLVAIPILVG-ALLRLPYGFLTDRFGGR   79 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-hhccccCCCHHHHHHHHHHHHHHh-HHHHHHHHhhhcccCch
Confidence            344444554444445444444444 444899999999998875444433 44456779999999976

>KOG3762|consensus

Probab=84.44  E-value=0.29  Score=47.86  Aligned_cols=50  Identities=18%  Similarity=0.361  Sum_probs=39.0

Q ss_pred             HHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        155 IAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       155 ~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +....-+++.|+. |+|+++.+.|.+++...+. .+++.++.|++.||+..+
T Consensus        27 ~g~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v-~~L~~P~~g~~Adr~r~~   76 (618)
T KOG3762|consen   27 FGSLFPLLAVYFK-QLGLNPAVVGTLTGTLPLV-EFLAAPLWGFLADRYRKR   76 (618)
T ss_pred             ccccchHHHHHHH-HcCCCHHHhhhhhhHHHHH-HHHhHHHHHHHHHHHHhc
Confidence            3445556777665 8999999999999876665 467889999999999744

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=82.17  E-value=3.3  Score=39.29  Aligned_cols=62  Identities=15%  Similarity=-0.029  Sum_probs=42.7

Q ss_pred             HHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHHHHH
Q psy11785        161 FLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYALGM  225 (308)
Q Consensus       161 ~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~~~~  225 (308)
                      -+-+.+++.|+++..+++++.-. ...+..++++..|+++||++.|  +-+.+++...+++..++
T Consensus        34 iLip~l~~~f~ls~~~a~liqfa-ff~gYf~~~lpa~~~~kk~gyk--~gi~lgL~l~avg~~lF   95 (422)
T COG0738          34 ILIPHLKEVFDLTYFEASLIQFA-FFGGYFIMSLPAGLLIKKLGYK--AGIVLGLLLYAVGAALF   95 (422)
T ss_pred             hhHHHHHHHhCccHHHHHHHHHH-HHHHHHHHhccHHHHHHHhhhH--HHHHHHHHHHHHHHHHH
Confidence            34456788999999999986533 3456678888999999999976  44444444444444433

>KOG3810|consensus

Probab=81.94  E-value=16  Score=34.38  Aligned_cols=40  Identities=15%  Similarity=0.155  Sum_probs=33.2

Q ss_pred             hhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785         11 IPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus        11 ~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      ++||-.-++|++.-+..|.--++...|-.+|..++-.+++
T Consensus       116 ysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs  155 (433)
T KOG3810|consen  116 YSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS  155 (433)
T ss_pred             hheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh
Confidence            6788889999999999998888888888787777776665

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=81.60  E-value=4.7  Score=38.72  Aligned_cols=76  Identities=21%  Similarity=0.423  Sum_probs=53.0

Q ss_pred             hhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy11785         12 PYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMF   91 (308)
Q Consensus        12 a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~   91 (308)
                      ..+.+..|+..-+...|++.+...+|..++-.+|..+.+.+ +      ++.+|  +-.-|++ .++..+..++....+.
T Consensus       341 vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~-~------vt~~~--f~~l~~l-ili~~~~~ll~l~ll~  410 (433)
T PF03092_consen  341 VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELF-G------VTRDD--FSNLWLL-ILICSVIQLLPLPLLF  410 (433)
T ss_pred             HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C------CCccc--ccchHHH-HHHHHHHHHHHHHHHH
Confidence            45678899999999999999999999999999999998754 2      23333  3234665 4555555544433444


Q ss_pred             hccCCC
Q psy11785         92 MFPKTL   97 (308)
Q Consensus        92 ~~p~~~   97 (308)
                      ++|++.
T Consensus       411 lLp~~~  416 (433)
T PF03092_consen  411 LLPPQK  416 (433)
T ss_pred             HcCCCc
Confidence            666643

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex

Probab=81.41  E-value=42  Score=31.56  Aligned_cols=30  Identities=27%  Similarity=0.371  Sum_probs=21.7

Q ss_pred             CccCCCCchhHHHHH-HHHHHHHHHHHHHHHH
Q psy11785         16 DNVANRESPLYFAIT-IGVRILGPSLGFILGS   46 (308)
Q Consensus        16 d~~~~~~~~~~~gi~-~~~~~~Gp~lG~~lGg   46 (308)
                      |.+|. ++.+.+|.- ......||++||+++.
T Consensus        48 DYvP~-~~~vlfghhf~sIAGaGPI~GPi~aa   78 (376)
T PF02554_consen   48 DYVPT-NKWVLFGHHFASIAGAGPIVGPILAA   78 (376)
T ss_pred             CCCCC-chHHhhHHHHHHHhccccchHHHHHH
Confidence            55554 445667764 5577889999999984

This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane

>KOG4686|consensus

Probab=81.04  E-value=5.6  Score=36.36  Aligned_cols=39  Identities=15%  Similarity=0.260  Sum_probs=34.8

Q ss_pred             hhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy11785         12 PYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTR   50 (308)
Q Consensus        12 a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~   50 (308)
                      ..++-.+|+++.|.+.|..+....+|-++-|++.|++++
T Consensus       375 P~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d  413 (459)
T KOG4686|consen  375 PCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIAD  413 (459)
T ss_pred             hhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeec
Confidence            345667899999999999999999999999999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	308
2erw_A	56	Serine protease inhibitor infestin; kazal type dom	4e-07
1ldt_L	46	LDTI, tryptase inhibitor; complex (hydrolase/inhib	9e-07
2arp_F	152	Follistatin; cystine knot, disulfide rich, EGF dom	1e-05
2arp_F	152	Follistatin; cystine knot, disulfide rich, EGF dom	3e-04
3sek_C	209	Follistatin-related protein 3; protein-protein com	2e-05
3sek_C	209	Follistatin-related protein 3; protein-protein com	8e-05
1nub_A	229	Basement membrane protein BM-40; extracellular mod	2e-05
3b4v_C	237	Follistatin-like 3; ligand-inhibitor signalling co	5e-05
3b4v_C	237	Follistatin-like 3; ligand-inhibitor signalling co	7e-05
2f3c_I	55	Thrombin inhibitor infestin; serine protease - inh	6e-05
3hh2_C	288	Follistatin; protein-protein complex, TB domain, c	1e-04
3hh2_C	288	Follistatin; protein-protein complex, TB domain, c	1e-04
3hh2_C	288	Follistatin; protein-protein complex, TB domain, c	7e-04
1y1b_A	48	Elastase inhibitor; non-classical, kazal-type, pro	1e-04
1tbr_R	103	RHODNIIN; complex (serine protease-inhibitor), kaz	1e-04
1lr7_A	74	Follistatin, FS1; heparin-binding, cystine-rich, s	3e-04
3qtl_D	75	Kazal-type serine protease inhibitor SPI-1; serine	5e-04

>2erw_A Serine protease inhibitor infestin; kazal type domain, blood clotting, hydrolase inhibitor; 1.40A {Triatoma infestans} SCOP: g.68.1.1 Length = 56

 Score = 45.7 bits (108), Expect = 4e-07
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 260 CECDHSKFNPICGGDGRTYFSACHAGCQNISSIDG 294
           C C  + + P+CG DG+TY + C   C   + + G
Sbjct: 6   CACFRN-YVPVCGSDGKTYGNPCMLNCAAQTKVPG 39

>1ldt_L LDTI, tryptase inhibitor; complex (hydrolase/inhibitor), hydrolase, inflammation; 1.90A {Hirudo medicinalis} SCOP: g.68.1.1 PDB: 1an1_I 2kmo_A 2kmp_A 2kmq_A 2kmr_A Length = 46

 Score = 44.0 bits (104), Expect = 9e-07
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 260 CECDHSKFNPICGGDGRTYFSACHAGCQNISS 291
           C C      P+CG DGRTY ++C A C  +S 
Sbjct: 4   CACPK-ILKPVCGSDGRTYANSCIARCNGVSI 34

>2arp_F Follistatin; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Rattus norvegicus} Length = 152

 Score = 43.7 bits (102), Expect = 1e-05
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)

Query: 254 CATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
                 C    S    +CG DG TY SACH   A C    SI
Sbjct: 101 VTCNRICPEPSSSEQSLCGNDGVTYSSACHLRKATCLLGRSI 142

>2arp_F Follistatin; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Rattus norvegicus} Length = 152

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 4/41 (9%)

Query: 251 EPMCATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQN 288
           +P C     C    +   P+CG DG+TY + C    A C+ 
Sbjct: 24  KPRCVCAPDCSNI-TWKGPVCGLDGKTYRNECALLKARCKE 63

>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens} PDB: 2kcx_A Length = 209

 Score = 44.1 bits (103), Expect = 2e-05
 Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 3/46 (6%)

Query: 250 FEPMCATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
              +      C    S    +CG +  TY S+CH   A C    SI
Sbjct: 155 AHCVVCRAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCFLGRSI 200

>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens} PDB: 2kcx_A Length = 209

 Score = 41.8 bits (97), Expect = 8e-05
 Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 4/41 (9%)

Query: 251 EPMCATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQN 288
            P C     C         +CG DG TY   C    A C+ 
Sbjct: 81  RPRCECAPDCSGL-PARLQVCGSDGATYRDECELRAARCRG 120

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A* Length = 229

 Score = 43.8 bits (102), Expect = 2e-05
 Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 3/45 (6%)

Query: 254 CATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISSIDGK 295
           C     C     +F  +C  D +T+ S+CH     C    +  G 
Sbjct: 29  CQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGH 73

>3b4v_C Follistatin-like 3; ligand-inhibitor signalling complex, cleavage on PAIR of BAS residues, glycoprotein, growth factor, hormone, secreted; HET: NAG; 2.48A {Homo sapiens} Length = 237

 Score = 43.0 bits (100), Expect = 5e-05
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 3/42 (7%)

Query: 254 CATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
                 C    S    +CG +  TY S+CH   A C    SI
Sbjct: 168 VCRAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCFLGRSI 209

>3b4v_C Follistatin-like 3; ligand-inhibitor signalling complex, cleavage on PAIR of BAS residues, glycoprotein, growth factor, hormone, secreted; HET: NAG; 2.48A {Homo sapiens} Length = 237

 Score = 42.2 bits (98), Expect = 7e-05
 Identities = 10/38 (26%), Positives = 11/38 (28%), Gaps = 1/38 (2%)

Query: 251 EPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQN 288
            P C     C         +CG DG TY   C      
Sbjct: 90  RPRCECAPDCSGL-PARLQVCGSDGATYRDECELRAAR 126

>2f3c_I Thrombin inhibitor infestin; serine protease - inhibitor complex, kazal-type domain, hydrolase/hydrolase inhibitor complex; 2.50A {Triatoma infestans} SCOP: g.68.1.1 PDB: 1kma_A Length = 55

 Score = 39.1 bits (91), Expect = 6e-05
 Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 1/32 (3%)

Query: 260 CECDHSKFNPICGGDGRTYFSACHAGCQNISS 291
           C C     + +CG DG TY + C   C     
Sbjct: 6   CACPRV-LHRVCGSDGNTYSNPCTLDCAKHEG 36

>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens} PDB: 2b0u_C* 2p6a_D Length = 288

 Score = 42.3 bits (98), Expect = 1e-04
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 251 EPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQN 288
           +P C     C    +   P+CG DG+TY + C      
Sbjct: 84  KPRCVCAPDCSNI-TWKGPVCGLDGKTYRNECALLKAR 120

>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens} PDB: 2b0u_C* 2p6a_D Length = 288

 Score = 42.3 bits (98), Expect = 1e-04
 Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 248 SSFEPMCATTHG-CECDHSKFNPICGGDGRTYFSACH---AGCQNISSID 293
            +    C T +  C    S    +CG DG TY SACH   A C    SI 
Sbjct: 154 QTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIG 203

>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens} PDB: 2b0u_C* 2p6a_D Length = 288

 Score = 39.6 bits (91), Expect = 7e-04
 Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 3/44 (6%)

Query: 252 PMCATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
             C+       D     P+C  D  TY S C    A C +   +
Sbjct: 236 GRCSLCDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLL 279

>1y1b_A Elastase inhibitor; non-classical, kazal-type, protease inhibitor, CSH motif, hydrolase inhibitor; NMR {Synthetic} PDB: 1y1c_A Length = 48

 Score = 38.3 bits (89), Expect = 1e-04
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 6/39 (15%)

Query: 260 CECDH---SKFNPICGGDGRTYFSACH---AGCQNISSI 292
            +C      +++P+CG DG TY +AC    A C++ + I
Sbjct: 2   PDCPLICTMQYDPVCGSDGITYGNACMLLGASCRSDTPI 40

>1tbr_R RHODNIIN; complex (serine protease-inhibitor), kazal-type inhibitor, T complex (serine protease-inhibitor) complex; 2.60A {Rhodnius prolixus} SCOP: g.68.1.1 g.68.1.1 PDB: 1tbq_R Length = 103

 Score = 39.7 bits (92), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 260 CECDHSKFNPICGGDGRTYFSACHAGCQN 288
           C C H+  + +CG DG TY + C   C  
Sbjct: 6   CACPHA-LHRVCGSDGETYSNPCTLNCAK 33

>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A Length = 74

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 251 EPMCATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
           +P C     C    +   P+CG DG+TY + C    A C+    +
Sbjct: 22  KPRCVCAPDCSNI-TWKGPVCGLDGKTYRNECALLKARCKEQPEL 65

>3qtl_D Kazal-type serine protease inhibitor SPI-1; serine protease -kazal type serine protease inhibitor comple hydrolase inhibitor; 2.60A {Carcinoscorpius rotundicauda} Length = 75

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 7/25 (28%), Positives = 11/25 (44%)

Query: 267 FNPICGGDGRTYFSACHAGCQNISS 291
           + P+CG +G  Y + C      I  
Sbjct: 7   YKPVCGANGEVYDNECFLNKAGIEP 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	308
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.62
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.61
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.36
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.19
2erw_A	56	Serine protease inhibitor infestin; kazal type dom	99.16
1ldt_L	46	LDTI, tryptase inhibitor; complex (hydrolase/inhib	99.13
1pce_A	60	PEC-60; proteinase inhibitor(kazal type); NMR {Sus	99.01
1y1b_A	48	Elastase inhibitor; non-classical, kazal-type, pro	98.92
2cfq_A	417	Lactose permease; transport, transport mechanism,	98.89
2f3c_I	55	Thrombin inhibitor infestin; serine protease - inh	98.81
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	98.8
1tgs_I	56	Pancreatic secretory trypsin inhibitor (kazal type	98.8
1cgj_I	56	Pancreatic secretory trypsin inhibitor (kazal type	98.76
1bus_A	57	Proteinase inhibitor IIA; HET: PCA; NMR {Bos tauru	98.69
1uvf_A	61	Serine proteinase inhibitor kazal type 5; trypsin	98.6
1r0r_I	51	Ovomucoid, omtky3; high resolution, serine proteas	98.56
1uvg_A	78	Serine proteinase inhibitor kazal type 5; trypsin	98.31
2jxd_A	62	Serine protease inhibitor kazal-type 2; anti-paral	98.28
2xut_A	524	Proton/peptide symporter family protein; transport	98.16
3pis_D	42	Kazal-type serine protease inhibitor SPI-1; typica	97.89
1tbr_R	103	RHODNIIN; complex (serine protease-inhibitor), kaz	97.85
2cfq_A	417	Lactose permease; transport, transport mechanism,	97.82
1h0z_A	68	Serine protease inhibitor kazal-type 5, contains h	97.8
2leo_A	66	Serine protease inhibitor kazal-type 7; esophageal	96.9
1lr7_A	74	Follistatin, FS1; heparin-binding, cystine-rich, s	97.46
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	97.15
1tbr_R	103	RHODNIIN; complex (serine protease-inhibitor), kaz	97.14
2xut_A	524	Proton/peptide symporter family protein; transport	97.05
3qtl_D	75	Kazal-type serine protease inhibitor SPI-1; serine	97.05
3qtl_D	75	Kazal-type serine protease inhibitor SPI-1; serine	96.54
2arp_F	152	Follistatin; cystine knot, disulfide rich, EGF dom	96.51
1hdl_A	55	HF6478, serine proteinase inhibitor lekti; putativ	96.38
1nub_A	229	Basement membrane protein BM-40; extracellular mod	96.23
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	96.04
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	96.03
2arp_F	152	Follistatin; cystine knot, disulfide rich, EGF dom	95.96
3sek_C	209	Follistatin-related protein 3; protein-protein com	95.7
1yu6_C	185	Ovomucoid; protein proteinase inhibitor, protease,	95.67
1yu6_C	185	Ovomucoid; protein proteinase inhibitor, protease,	95.63
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	95.56
3sek_C	209	Follistatin-related protein 3; protein-protein com	95.37
3b4v_C	237	Follistatin-like 3; ligand-inhibitor signalling co	95.37
3b4v_C	237	Follistatin-like 3; ligand-inhibitor signalling co	95.28
3hh2_C	288	Follistatin; protein-protein complex, TB domain, c	95.13
3hh2_C	288	Follistatin; protein-protein complex, TB domain, c	95.12
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	94.32
3tjq_A	140	Serine protease HTRA1; hydrolase; 2.00A {Homo sapi	94.21
4gi3_C	83	Greglin; kazal type inhibitor, hydrolase-hydrolase	93.63

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.62  E-value=1e-15  Score=143.71  Aligned_cols=181  Identities=14%  Similarity=0.117  Sum_probs=125.2

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++...+++.|++|+++|++++|+...+..+|.++||++++++.+.+            +     .|+..|++.++
T Consensus       132 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------g-----~w~~~f~~~~~  194 (451)
T 1pw4_A          132 FQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWF------------N-----DWHAALYMPAF  194 (451)
T ss_dssp             HHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHT------------C-----CSTTCTHHHHH
T ss_pred             HhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------c-----cHHHHHHHHHH
Confidence            445677888999999999999999999999999999999999999987643            1     14455666666


Q ss_pred             HHHHHHHHH-HhccCCCCCCCCccCCcccccC-CCccc-cccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHH
Q psy11785         82 FLMLAAVAM-FMFPKTLTKASPVNGTTTVATL-PTKKE-SNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGL  158 (308)
Q Consensus        82 ~~ll~~i~~-~~~p~~~p~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~  158 (308)
                      +.++..+.. +..|++ |+..+.+..++.... ++..+ +++.+.+.++  ...++++|||.++...+..++.....+++
T Consensus       195 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (451)
T 1pw4_A          195 CAILVALFAFAMMRDT-PQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQ--IFMQYVLPNKLLWYIAIANVFVYLLRYGI  271 (451)
T ss_dssp             HHHHHHHHHHHHCCCS-STTTCCCSCTTTCCC-------------CCTH--HHHHHTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccCC-HhhcCCCChhhhcccccccchhhhhccccccc--chHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence            555554443 444543 322211111110000 00000 0001111121  22578899999999999988888999999


Q ss_pred             HhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhc
Q psy11785        159 YTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKF  203 (308)
Q Consensus       159 ~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~  203 (308)
                      ..++|.|+++++|+++.+++++.....+ +.++|.++.|++.||+
T Consensus       272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~~~~  315 (451)
T 1pw4_A          272 LDWSPTYLKEVKHFALDKSSWAYFLYEY-AGIPGTLLCGWMSDKV  315 (451)
T ss_dssp             HHHHHHHBTTBSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence            9999999999999999999987765543 5678899999999998

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.61  E-value=4.2e-15  Score=139.06  Aligned_cols=195  Identities=13%  Similarity=0.152  Sum_probs=133.3

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhh-cccccCCC--CCCCCCCCC-chh----HHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCT-RLYVDLSI--PSDITPSDP-RWI----GAWW   73 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll-~~~v~~~~--~~~~~~~~~-~W~----gaWw   73 (308)
                      |.+...+...+++.|++|+++|++++++..+...+|.++||++++++. +...+.+.  ....++++. .|.    ..|+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~  209 (438)
T 3o7q_A          130 GLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQ  209 (438)
T ss_dssp             HHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             hHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHH
Confidence            456677888999999999999999999999999999999999999988 43210000  000000000 111    0177


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHH
Q psy11785         74 LGLVLVAVFLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHIL  153 (308)
Q Consensus        74 ~~fii~g~~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~  153 (308)
                      ..|++.+++.++..+.+++.+  .|+.+++++++           +    +.++..+.+++++|||.++...+..++...
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~-----------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (438)
T 3o7q_A          210 TPYMIIVAIVLLVALLIMLTK--FPALQSDNHSD-----------A----KQGSFSASLSRLARIRHWRWAVLAQFCYVG  272 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCC--CCCCTTTCCCC-----------S----STTSHHHHHHHHTTCSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHc--CCccccccccc-----------c----cccchhhhHHHHHhChHHHHHHHHHHHHHH
Confidence            788777766555554444322  23222111000           0    011344567899999999999888888888


Q ss_pred             HHHHHHhHHHHH-HHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785        154 PIAGLYTFLPKY-FETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI  216 (308)
Q Consensus       154 ~~~~~~~~~P~y-l~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~  216 (308)
                      ...++..++|.| +++++|+++.+++++..... .+.++|.+++|++.||+++|  +.+..+.+
T Consensus       273 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~~r~~~~--~~~~~~~~  333 (438)
T 3o7q_A          273 AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTM-VCFFIGRFTGTWLISRFAPH--KVLAAYAL  333 (438)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHSCHH--HHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhccCCcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHhcch--HHHHHHHH
Confidence            889999999999 99999999999998776554 35678999999999998754  44444333

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.36  E-value=7.4e-14  Score=128.32  Aligned_cols=162  Identities=14%  Similarity=0.092  Sum_probs=120.8

Q ss_pred             cccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q psy11785          3 QTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVF   82 (308)
Q Consensus         3 ~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~   82 (308)
                      .+...+...+++.|++|+++|++++++......+|.++||.+++++.+.+                  .|+..|.+.++.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~~~~~~~~~~~  163 (375)
T 2gfp_A          102 TGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMW------------------NWRACYLFLLVL  163 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHH------------------HHHHHHHHHHHH
T ss_pred             HHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhc------------------cHHHHHHHHHHH
Confidence            45567788999999999999999999999999999999999999987632                  488888877766


Q ss_pred             HHHHHHH-HHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         83 LMLAAVA-MFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        83 ~ll~~i~-~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      .++..+. ++.+||+.    ++++++           +   +..++    .++++|||.++...+...+......++.++
T Consensus       164 ~~~~~~~~~~~~~~~~----~~~~~~-----------~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (375)
T 2gfp_A          164 CAGVTFSMARWMPETR----PVDAPR-----------T---RLLTS----YKTLFGNSGFNCYLLMLIGGLAGIAAFEAC  221 (375)
T ss_dssp             HHHHHCCCCCSSCCCS----TTTCCC-----------C---CTTTC----STHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCcccC----CCCccc-----------c---cHHHH----HHHHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence            5554432 22333321    111000           0   00111    246778898888888888888889999999


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccC
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKP  205 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~  205 (308)
                      +|.|+++++|+++.+++++..... .+.+++.++.+++.||++.
T Consensus       222 ~~~~~~~~~g~~~~~~g~~~~~~~-~~~~~~~~~~~~l~~r~~~  264 (375)
T 2gfp_A          222 SGVLMGAVLGLSSMTVSILFILPI-PAAFFGAWFAGRPNKRFST  264 (375)
T ss_dssp             CSCSSHHHHHHHHHHHHHHHHTHH-HHHHHHHHHHHTTTTHHHH
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998776544 4567788888999998864

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.19  E-value=3.9e-11  Score=113.99  Aligned_cols=187  Identities=9%  Similarity=0.010  Sum_probs=108.2

Q ss_pred             ccccccccchhhhcCccCCCC--chhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRE--SPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLV   79 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~--~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~   79 (308)
                      |.+...+...+++.|++|+++  |++++++++.+..+|.++||.+++++.+.+                  +|+..|.+.
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------g~~~~f~~~  182 (491)
T 4aps_A          121 GTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAA------------------GYHVAFSLA  182 (491)
T ss_dssp             HHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS------------------CHHHHHHHH
T ss_pred             HHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhh------------------hHHHHHHHH
Confidence            456677889999999999999  777888899999999999999999987642                  267777776


Q ss_pred             HHHHHHHHHHHHhc-cCCCCCCCCccCCc-ccccCCCc--------------------cccccCCC--------------
Q psy11785         80 AVFLMLAAVAMFMF-PKTLTKASPVNGTT-TVATLPTK--------------------KESNQKNP--------------  123 (308)
Q Consensus        80 g~~~ll~~i~~~~~-p~~~p~~~~~~~~~-~~~~~~~~--------------------~~~~~~~~--------------  123 (308)
                      ++..++..+.++.. ++..++..+..++. +.+...+.                    .+..+.+.              
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (491)
T 4aps_A          183 AIGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPV  262 (491)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSCCSCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcccccccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHH
Confidence            66555444443333 33333221111000 00000000                    00000000              


Q ss_pred             -----CCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhhe
Q psy11785        124 -----SLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGV  198 (308)
Q Consensus       124 -----~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~  198 (308)
                           ..++.........+...++...+.............+++|.|+++.++.+..+++++.....+ ..+++.++.|+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  341 (491)
T 4aps_A          263 FYFAWMISSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPL-FIMLYTPFFAW  341 (491)
T ss_dssp             HHHHHHC------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHH-HHHHHHHHHHH
T ss_pred             HHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchH-HHHHHHHHHHH
Confidence                 000000000111122233444444555556666677889999999999987777877655443 45667788899


Q ss_pred             ehhhccCCc
Q psy11785        199 FILKFKPNA  207 (308)
Q Consensus       199 l~~r~~~~~  207 (308)
                      +.||+++|.
T Consensus       342 l~~r~~~r~  350 (491)
T 4aps_A          342 LWTAWKKNQ  350 (491)
T ss_dssp             HHHHTTTC-
T ss_pred             HHHHHhccC
Confidence            999998764

>2erw_A Serine protease inhibitor infestin; kazal type domain, blood clotting, hydrolase inhibitor; 1.40A {Triatoma infestans} SCOP: g.68.1.1

Probab=99.16  E-value=9e-12  Score=83.26  Aligned_cols=35  Identities=31%  Similarity=0.872  Sum_probs=29.6

Q ss_pred             CCCCCCccCCCCCcceeeCCCCceecCccccccccccc
Q psy11785        254 CATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISS  291 (308)
Q Consensus       254 Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~  291 (308)
                      +|.+  |.|+ ..|+||||+||+||.||||++|.....
T Consensus         2 ~~~~--C~C~-~~~~PVCGsDG~TY~n~C~~~c~~~~~   36 (56)
T 2erw_A            2 VRNP--CACF-RNYVPVCGSDGKTYGNPCMLNCAAQTK   36 (56)
T ss_dssp             --CT--TCCC-CCCCCEEETTSCEESSHHHHHHHHHHT
T ss_pred             CCcc--ccCC-CCCCccCCCCCCEECCHhHhhhhhhcc
Confidence            5778  9996 679999999999999999999987554

>1ldt_L LDTI, tryptase inhibitor; complex (hydrolase/inhibitor), hydrolase, inflammation; 1.90A {Hirudo medicinalis} SCOP: g.68.1.1 PDB: 1an1_I 2kmo_A 2kmp_A 2kmq_A 2kmr_A

Probab=99.13  E-value=5.8e-12  Score=80.38  Aligned_cols=28  Identities=46%  Similarity=1.214  Sum_probs=26.1

Q ss_pred             ccCCCCCcceeeCCCCceecCcccccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHAGCQN  288 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~AGC~~  288 (308)
                      |.|+. .|+||||+||+||.|||||+|.+
T Consensus         4 C~C~~-~~~PVCGsDG~TY~n~C~~~c~~   31 (46)
T 1ldt_L            4 CACPK-ILKPVCGSDGRTYANSCIARCNG   31 (46)
T ss_dssp             CEEEC-CCCCEECSTTCEESSHHHHHHHC
T ss_pred             CccCC-CCCCcCCCCCCEECChhhhccCc
Confidence            99975 79999999999999999999983

>1pce_A PEC-60; proteinase inhibitor(kazal type); NMR {Sus scrofa} SCOP: g.68.1.1

Probab=99.01  E-value=7.3e-11  Score=79.92  Aligned_cols=36  Identities=36%  Similarity=0.929  Sum_probs=31.2

Q ss_pred             ccCCCC---CCCccCCCCCcceeeCCCCceecCcccccccccc
Q psy11785        251 EPMCAT---THGCECDHSKFNPICGGDGRTYFSACHAGCQNIS  290 (308)
Q Consensus       251 ~~~Cn~---~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~  290 (308)
                      ++.||.   .  |.|+.+ |+||||+||+||.|+|++ |+..-
T Consensus         8 ~~~C~~~~~~--~~C~~~-~~PVCGsdG~TY~n~C~~-~~~~c   46 (60)
T 1pce_A            8 MPICEHMTES--PDCSRI-YDPVCGTDGVTYESECKL-CLARI   46 (60)
T ss_dssp             CCCCSCCTTC--SSCTTC-CCCEEETTSCEESSHHHH-HHHHH
T ss_pred             CCCCCCcCCC--CCCCCC-CCceECCCCCEECCHhHH-HHHHh
Confidence            578998   7  999865 999999999999999999 87543

>1y1b_A Elastase inhibitor; non-classical, kazal-type, protease inhibitor, CSH motif, hydrolase inhibitor; NMR {Synthetic} PDB: 1y1c_A

Probab=98.92  E-value=2.4e-10  Score=73.86  Aligned_cols=35  Identities=37%  Similarity=0.798  Sum_probs=29.3

Q ss_pred             cCCCCCCCccCCCCCcceeeCCCCceecCccccccccccc
Q psy11785        252 PMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNISS  291 (308)
Q Consensus       252 ~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~  291 (308)
                      +.||..  |   ...|+||||+||+||.|+|+++|..-..
T Consensus         2 ~~C~~~--C---~~~~~PVCGsdg~TY~n~C~~~~~~c~~   36 (48)
T 1y1b_A            2 PDCPLI--C---TMQYDPVCGSDGITYGNACMLLGASCRS   36 (48)
T ss_dssp             CCCCSC--C---CSSCBCEEEETTEEESBHHHHHHHHHHS
T ss_pred             CCcccc--C---CCCCCceECCCCCEECCHhHhhHHHhhC
Confidence            468887  6   3679999999999999999999975443

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=98.89  E-value=3.1e-10  Score=106.22  Aligned_cols=153  Identities=13%  Similarity=0.102  Sum_probs=89.2

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy11785         21 RESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKA  100 (308)
Q Consensus        21 ~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p~~~p~~  100 (308)
                      ++++...|.......+|.++||.+++++.+.                   .|+..|++.++..++..+.++..+++.++.
T Consensus       134 ~~~~~~~g~~~~~~~~g~~~~~~l~~~l~~~-------------------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  194 (417)
T 2cfq_A          134 RRSNFEFGRARMFGCVGWALGASIVGIMFTI-------------------NNQFVFWLGSGCALILAVLLFFAKTDAPSS  194 (417)
T ss_dssp             HHHTCCHHHHSSSTTTHHHHHHHHHHHHHHH-------------------CSHHHHTTTTTTTTTHHHHSCSSCCCCSCS
T ss_pred             hhcccchHHHHHHHHHHHHHHHHHHHHHHHh-------------------chhHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence            3456667777777889999999999988752                   155556655544333333333333332111


Q ss_pred             CCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCC---cccc
Q psy11785        101 SPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLP---SHTA  177 (308)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls---~~~a  177 (308)
                      .+ ++  +     + .+++ . +  +...+.+++++|+|.++...+..+.....++.+..++|.|+++.++..   ....
T Consensus       195 ~~-~~--~-----~-~~~~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (417)
T 2cfq_A          195 AT-VA--N-----A-VGAN-H-S--AFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVF  261 (417)
T ss_dssp             SC-SS--S-----S-SSSC-C-C--CCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHH
T ss_pred             cc-cc--c-----c-cccc-c-c--cccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHH
Confidence            10 00  0     0 0000 0 0  112345678899999877666655555566667788999998776532   3333


Q ss_pred             cccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        178 NMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       178 gl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      +++.... ..+.+++.+++|++.||+++|
T Consensus       262 g~~~~~~-~~~~~~~~~~~g~l~dr~g~~  289 (417)
T 2cfq_A          262 GYVTTMG-ELLNASIMFFAPLIINRIGGK  289 (417)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHCHH
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHhcHH
Confidence            4443322 224467889999999999854

>2f3c_I Thrombin inhibitor infestin; serine protease - inhibitor complex, kazal-type domain, hydrolase/hydrolase inhibitor complex; 2.50A {Triatoma infestans} SCOP: g.68.1.1 PDB: 1kma_A

Probab=98.81  E-value=7.3e-10  Score=73.61  Aligned_cols=30  Identities=33%  Similarity=0.950  Sum_probs=27.0

Q ss_pred             ccCCCCCcceeeCCCCceecCcccccccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHAGCQNIS  290 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~  290 (308)
                      |.|+. .|+||||+||+||.|+|+++|..-.
T Consensus         6 C~C~~-~~~PVCGsDG~TY~n~C~l~~~~c~   35 (55)
T 2f3c_I            6 CACPR-VLHRVCGSDGNTYSNPCTLDCAKHE   35 (55)
T ss_dssp             CEEEC-CCCCEEETTSCEESSHHHHHHHHHH
T ss_pred             CcCCC-CCCceECCCCCEECCHhHHHHHhhc
Confidence            99974 7999999999999999999998644

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=98.80  E-value=8.1e-10  Score=104.76  Aligned_cols=194  Identities=13%  Similarity=0.128  Sum_probs=103.4

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++.+.+|+.|+.|+++|++..++...+..+|..+++.++..+......       ...+++   .||..+.+..+
T Consensus       139 g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~~  208 (491)
T 4gc0_A          139 GVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDA-------SWLNTD---GWRYMFASECI  208 (491)
T ss_dssp             HHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT-------TTTTTT---HHHHHHHTTHH
T ss_pred             HHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhcccccc-------ccccch---hhHHHhhhhhh
Confidence            45667788999999999999999999999999999999999999887653210       011111   36776666655


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCc-c-cccC---CC----ccccccCCCCCC--cchHHHHHhhcChHHHHHHHHHHH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTT-T-VATL---PT----KKESNQKNPSLK--DFPKAVKRLLKNDILMYRTASSVL  150 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~-~-~~~~---~~----~~~~~~~~~~~~--~~~~~~~~Ll~n~~f~~~~l~~~~  150 (308)
                      ..++..+..+..||+. +....+.+. + .+.+   ..    .++..+.+....  +.......+++.+..........+
T Consensus       209 ~~~~~~~~~~~~peSp-~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (491)
T 4gc0_A          209 PALLFLMLLYTVPESP-RWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIF  287 (491)
T ss_dssp             HHHHHHHHGGGSCCCH-HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCCTHHHHHHHHHHH
T ss_pred             hhhhhhhhhhcCCCCh-HHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHHHhcccHHHHHHHHHHH
Confidence            5555444445555432 110000000 0 0000   00    000000000000  000011233444444444333333


Q ss_pred             H-HHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCcc
Q psy11785        151 H-ILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNAR  208 (308)
Q Consensus       151 ~-~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~  208 (308)
                      . ....+.+..+.|.+. +..+.+............ ...+++.+++++++||+|+|..
T Consensus       288 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~dr~Grr~~  344 (491)
T 4gc0_A          288 QQFVGINVVLYYAPEVF-KTLGASTDIALLQTIIVG-VINLTFTVLAIMTVDKFGRKPL  344 (491)
T ss_dssp             HHHTCHHHHHHHHHHHH-HHSSCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCSHHH
T ss_pred             HHHhhhhHHHhcchHHH-HhcCCCccchhhHHHHHH-HHHHHHHHHHHHHHHhhcCcch
Confidence            3 333444555555544 456666665544333222 2356788899999999997643

>1tgs_I Pancreatic secretory trypsin inhibitor (kazal type); complex (proteinase/inhibitor); 1.80A {Sus scrofa} SCOP: g.68.1.1 PDB: 1cgi_I 1hpt_A

Probab=98.80  E-value=7.8e-10  Score=73.77  Aligned_cols=36  Identities=36%  Similarity=0.898  Sum_probs=31.1

Q ss_pred             ccCCCC-CCCccCCCCCcceeeCCCCceecCcccccccccc
Q psy11785        251 EPMCAT-THGCECDHSKFNPICGGDGRTYFSACHAGCQNIS  290 (308)
Q Consensus       251 ~~~Cn~-~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~  290 (308)
                      ++.|+. .  |.|+ ..|+||||+||+||.|+|++ |...-
T Consensus         6 ~~~C~~~~--~~C~-~~~~PVCGsDG~TY~n~C~l-~~~~c   42 (56)
T 1tgs_I            6 EATCTSEV--SGCP-KIYNPVCGTDGITYSNECVL-CSENK   42 (56)
T ss_dssp             CCCCCCSS--SSEE-CCCCCEEETTSCEESSHHHH-HHHHH
T ss_pred             cCCCCCCC--CCCC-CCCCccCCCCCCEECCCcHH-HHHHh
Confidence            468998 7  9996 57999999999999999999 87553

>1cgj_I Pancreatic secretory trypsin inhibitor (kazal type) variant 4; serine protease/inhibitor complex; 2.30A {Homo sapiens} SCOP: g.68.1.1

Probab=98.76  E-value=1.3e-09  Score=72.66  Aligned_cols=36  Identities=33%  Similarity=0.761  Sum_probs=31.1

Q ss_pred             cccCCC-CCCCccCCCCCcceeeCCCCceecCccccccccc
Q psy11785        250 FEPMCA-TTHGCECDHSKFNPICGGDGRTYFSACHAGCQNI  289 (308)
Q Consensus       250 ~~~~Cn-~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~  289 (308)
                      .++.|| ..  |.|+. .|+||||+||+||.|+|++ |...
T Consensus         5 ~~~~C~~~~--~~C~~-~~~PVCGsDG~TY~n~C~l-~~~~   41 (56)
T 1cgj_I            5 REAKCYNEL--NGCTL-EYRPVCGTDGDTYPNECVL-CFEN   41 (56)
T ss_dssp             CCCCCCTTS--SSEEC-CCCCEEETTSCEESSHHHH-HHHH
T ss_pred             ccCCCCCCC--CcCCC-CCCccCCCCCCEECCccHH-HHHH
Confidence            357899 58  99985 7999999999999999999 7654

>1bus_A Proteinase inhibitor IIA; HET: PCA; NMR {Bos taurus} SCOP: g.68.1.1 PDB: 2bus_A*

Probab=98.69  E-value=4.6e-09  Score=70.02  Aligned_cols=37  Identities=32%  Similarity=0.715  Sum_probs=29.2

Q ss_pred             cCCCCCC--CccCCCCCcceeeCCCCceecCcccccccccc
Q psy11785        252 PMCATTH--GCECDHSKFNPICGGDGRTYFSACHAGCQNIS  290 (308)
Q Consensus       252 ~~Cn~~~--~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~  290 (308)
                      ..|+...  .|.|+. .|+||||+||+||.|+|++ |...-
T Consensus         5 ~~C~~~~~~~~~C~~-~~~PVCGsDG~TY~n~C~l-c~~~~   43 (57)
T 1bus_A            5 VDCAEFKDPKVYCTR-ESNPHCGSNGETYGNKCAF-CKAVM   43 (57)
T ss_dssp             CCCSTTCTTTTSCSS-CSCCEEBSSSCEECCHHHH-HHHHH
T ss_pred             CcCCCCCCCCCcCCC-CCCCcCCCCCCeeCCHhHH-HHHHh
Confidence            4566621  399975 5999999999999999999 87543

>1r0r_I Ovomucoid, omtky3; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Meleagris gallopavo} SCOP: g.68.1.1 PDB: 1sgr_I 2gkr_I 1cho_I 1omt_A 1omu_A 1ppf_I* 1tur_A 1tus_A 3sgb_I 2ovo_A 4ovo_A 1iy5_A 1cso_I 1ct4_I 2sgf_I 2gkt_I 2gkv_A 2nu0_I 1m8b_A 1m8c_A ...

Probab=98.56  E-value=1.1e-08  Score=66.75  Aligned_cols=34  Identities=29%  Similarity=0.872  Sum_probs=26.9

Q ss_pred             CCCCCCccCCCCCcceeeCCCCceecCccccccccc
Q psy11785        254 CATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNI  289 (308)
Q Consensus       254 Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~  289 (308)
                      |+....+.|+ ..|+||||+||+||.|+|++ |.+.
T Consensus         3 C~~~~~~~C~-~~~~PVCGsDG~TY~n~C~l-~~~~   36 (51)
T 1r0r_I            3 CSEYPKPACT-LEYRPLCGSDNKTYGNKCNF-CNAV   36 (51)
T ss_dssp             CTTCCCSEEE-CCCCCEEETTSCEESSHHHH-HHHH
T ss_pred             CCCCCCCCCC-CCCCccCCCCCCEeCCHhHH-HHHH
Confidence            4443237787 57999999999999999999 7654

>2jxd_A Serine protease inhibitor kazal-type 2; anti-parallel beta sheet, beta-bulge, disulfide bond, alpha helix, pyrrolidone carboxylic acid, secreted; NMR {Homo sapiens}

Probab=98.28  E-value=4e-07  Score=61.75  Aligned_cols=36  Identities=36%  Similarity=0.847  Sum_probs=29.4

Q ss_pred             ccCCCCCCCccCCCCCcceeeCCCCceecCcccccccc
Q psy11785        251 EPMCATTHGCECDHSKFNPICGGDGRTYFSACHAGCQN  288 (308)
Q Consensus       251 ~~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~  288 (308)
                      ...|+....|.|+. .|+||||+||+||-|+|+. |..
T Consensus        11 ~~~C~~~~~~~C~~-~~~PVCGsDg~TY~N~C~l-~~~   46 (62)
T 2jxd_A           11 TPNCSQYRLPGCPR-HFNPVCGSDMSTYANECTL-CMK   46 (62)
T ss_dssp             CCCCSCCCCSSCCS-CCCCEEETTSCEECSTTTH-HHH
T ss_pred             CCCCCCCCCCCCCC-CCCceECCCCCEecCHhHH-HHH
Confidence            56788743488974 7999999999999999998 654

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=98.16  E-value=3.3e-06  Score=80.54  Aligned_cols=73  Identities=11%  Similarity=0.153  Sum_probs=56.2

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHH---HHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAI---TIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVL   78 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi---~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii   78 (308)
                      |.+...|...+++.|++|+++|+++.+.   ++++..+|.++||.+++++.+.+                  +|+..|.+
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------g~~~~f~~  183 (524)
T 2xut_A          122 GSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNF------------------GAAVAFGI  183 (524)
T ss_dssp             HHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTS------------------CHHHHHHH
T ss_pred             hccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------------------cHHHHHHH
Confidence            4566778889999999999999877666   88899999999999999887532                  27777777


Q ss_pred             HHHHHHHHHHHHHh
Q psy11785         79 VAVFLMLAAVAMFM   92 (308)
Q Consensus        79 ~g~~~ll~~i~~~~   92 (308)
                      .++..++..+.++.
T Consensus       184 ~~~~~~~~~~~~~~  197 (524)
T 2xut_A          184 PGVLMFVATVFFWL  197 (524)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHH
Confidence            77665554444433

>3pis_D Kazal-type serine protease inhibitor SPI-1; typical non-classical kazal type inhibitor fold; 2.00A {Carcinoscorpius rotundicauda}

Probab=97.89  E-value=3e-06  Score=52.48  Aligned_cols=27  Identities=30%  Similarity=0.880  Sum_probs=22.2

Q ss_pred             CCCCCcceeeCCCCceecCccccccccc
Q psy11785        262 CDHSKFNPICGGDGRTYFSACHAGCQNI  289 (308)
Q Consensus       262 C~~~~~~PvC~~~g~ty~SpC~AGC~~~  289 (308)
                      |+ ..|+||||+||+||-+.|+.-|...
T Consensus         3 C~-~~~~PVCGsDG~TY~N~C~l~~a~c   29 (42)
T 3pis_D            3 CP-HTYKPVCGANGEVYDNECFLNKAGI   29 (42)
T ss_dssp             CC-CCCCCEEBTTSCEESSHHHHHHTTB
T ss_pred             CC-CCCCceECCCCCEEccHhHHHHHhh
Confidence            65 5699999999999999998755443

>1tbr_R RHODNIIN; complex (serine protease-inhibitor), kazal-type inhibitor, T complex (serine protease-inhibitor) complex; 2.60A {Rhodnius prolixus} SCOP: g.68.1.1 g.68.1.1 PDB: 1tbq_R

Probab=97.85  E-value=6.3e-06  Score=61.91  Aligned_cols=34  Identities=35%  Similarity=0.947  Sum_probs=27.1

Q ss_pred             CCCCCCcc-CCCCCcceeeCCCCceecCccccccccc
Q psy11785        254 CATTHGCE-CDHSKFNPICGGDGRTYFSACHAGCQNI  289 (308)
Q Consensus       254 Cn~~~~C~-C~~~~~~PvC~~~g~ty~SpC~AGC~~~  289 (308)
                      |...  |. |+...|+||||+||+||-|+||+.|..-
T Consensus        53 c~~~--C~~C~~~~~~PVCgsdg~tY~n~C~~~~~~c   87 (103)
T 1tbr_R           53 DEDV--CQECDGDEYKPVCGSDDITYDNNCRLECASI   87 (103)
T ss_dssp             CCCT--TGGGTTCCCCCEEETTTEEESSHHHHHHHTT
T ss_pred             cCCc--CCCccccccCcccCCCCCEECcHhHHhHHhh
Confidence            4444  54 5557899999999999999999987643

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=97.82  E-value=1.7e-05  Score=73.79  Aligned_cols=73  Identities=11%  Similarity=0.106  Sum_probs=61.6

Q ss_pred             HhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCc
Q psy11785        134 RLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNA  207 (308)
Q Consensus       134 ~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~  207 (308)
                      .++|||.++...+..+........+..++|.|+++++|+|+.++|++.+...+ +.+++.++.|++.||+|+|.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~-~~~i~~~~~G~lsDr~Grr~   74 (417)
T 2cfq_A            2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISL-FSLLFQPLFGLLSDKLGLRK   74 (417)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHH-HHHHHHHHHHHHHTTSTTCC
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcchH
Confidence            46889999888887777777777788899999999999999999998776544 56788999999999999764

>1h0z_A Serine protease inhibitor kazal-type 5, contains hemofiltrate peptide HF6478, hemofiltrate...; serine proteinase inhibitor; NMR {Homo sapiens} SCOP: g.68.1.2

Probab=97.80  E-value=6.6e-06  Score=55.97  Aligned_cols=32  Identities=25%  Similarity=0.537  Sum_probs=25.5

Q ss_pred             CCCCCCccCCCCCcceeeCCCCceecCccccccccc
Q psy11785        254 CATTHGCECDHSKFNPICGGDGRTYFSACHAGCQNI  289 (308)
Q Consensus       254 Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~  289 (308)
                      .|..  +.|+ ..|+||||+||.||-+.|+- |...
T Consensus        20 ~~~~--~~C~-~~y~PVCGsDGkTY~N~C~l-c~a~   51 (68)
T 1h0z_A           20 RNGK--LACT-RENDPIQGPDGKVHGNTCSM-CEVF   51 (68)
T ss_dssp             SSSC--CCCC-CCSCCCBCTTSCBCSSHHHH-HHHH
T ss_pred             cCCC--CCCC-CCCCccCCCCCCEeCCHhHH-hHHH
Confidence            4445  7786 57999999999999999975 6543

>2leo_A Serine protease inhibitor kazal-type 7; esophageal cancer-related gene 2, hydrol inhibitor; NMR {Homo sapiens}

Probab=96.90  E-value=4.8e-06  Score=56.99  Aligned_cols=24  Identities=38%  Similarity=0.825  Sum_probs=21.5

Q ss_pred             ccCCCCCcceeeCCCCceecCcccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHA  284 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~A  284 (308)
                      +.|+ ..|+||||+||+||-|.|+-
T Consensus        24 ~~C~-~~~~PVCGSDG~TY~N~C~l   47 (66)
T 2leo_A           24 IPCP-ITYLPVCGSDYITYGNECHL   47 (66)
Confidence            6786 56999999999999999987

>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A

Probab=97.46  E-value=3.1e-05  Score=54.42  Aligned_cols=31  Identities=35%  Similarity=0.702  Sum_probs=22.6

Q ss_pred             CCCCCCccCCCCCcceeeCCCCceecCccccccc
Q psy11785        254 CATTHGCECDHSKFNPICGGDGRTYFSACHAGCQ  287 (308)
Q Consensus       254 Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AGC~  287 (308)
                      |..+  |.- ...|+||||+||+||-|.|+--+.
T Consensus        27 C~~~--C~~-~~~~~pVCGsDG~TY~n~C~l~~~   57 (74)
T 1lr7_A           27 CAPD--CSN-ITWKGPVCGLDGKTYRNECALLKA   57 (74)
T ss_dssp             ECCC--GGG-CCCCSCEEETTSCEESSHHHHHHH
T ss_pred             CCCC--CCC-CcCCCceeCCCCCCcCChhHHHHH
Confidence            5455  542 135999999999999999975443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=97.15  E-value=0.00067  Score=63.74  Aligned_cols=78  Identities=12%  Similarity=0.112  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-----hCCCcccccccchhhhhhhhHHHhhhhheehhh-ccCCccchhHH
Q psy11785        140 ILMYRTASSVLHILPIAGLYTFLPKYFETQ-----FRLPSHTANMVSGVGGILVMGIGIILSGVFILK-FKPNARFVAAW  213 (308)
Q Consensus       140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~-----~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r-~~~~~~~~~~~  213 (308)
                      .++...+..++....++++..++|.|++++     +|++..+.+++.+...+ +..++.+++|++.|| +|+|  +.+..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~g~r--~~~~~   90 (491)
T 4aps_A           14 GLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYAS-MVYLSGTIGGFVADRIIGAR--PAVFW   90 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTSCHH--HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHhccccch--HHHHH
Confidence            455666677778888999999999999999     99999999998776544 567889999999999 8854  44444


Q ss_pred             HHHHHHH
Q psy11785        214 IAITAVL  220 (308)
Q Consensus       214 ~~~~~~~  220 (308)
                      +.+...+
T Consensus        91 ~~~~~~~   97 (491)
T 4aps_A           91 GGVLIML   97 (491)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4443333

>1tbr_R RHODNIIN; complex (serine protease-inhibitor), kazal-type inhibitor, T complex (serine protease-inhibitor) complex; 2.60A {Rhodnius prolixus} SCOP: g.68.1.1 g.68.1.1 PDB: 1tbq_R

Probab=97.14  E-value=9.2e-05  Score=55.47  Aligned_cols=28  Identities=39%  Similarity=1.126  Sum_probs=23.9

Q ss_pred             ccCCCCCcceeeCCCCceecCcccccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHAGCQN  288 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~AGC~~  288 (308)
                      |.|+. .|+||||+||.||-|.|+.-|..
T Consensus         6 c~C~~-~~~PVCGsDG~TY~N~C~l~~a~   33 (103)
T 1tbr_R            6 CACPH-ALHRVCGSDGETYSNPCTLNCAK   33 (103)
T ss_dssp             GEEES-CCCCEEETTSCEESSHHHHHHHH
T ss_pred             cCCCC-CCCCcCcCCCCEeCCHhHHHHHH
Confidence            99974 69999999999999999875543

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=97.05  E-value=0.00055  Score=64.96  Aligned_cols=66  Identities=20%  Similarity=0.122  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC------CCcccccccchhhhhhhhHHHhhhhheehhhc-cCC
Q psy11785        140 ILMYRTASSVLHILPIAGLYTFLPKYFETQFR------LPSHTANMVSGVGGILVMGIGIILSGVFILKF-KPN  206 (308)
Q Consensus       140 ~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~g------ls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~-~~~  206 (308)
                      .++...+..++.....+++..++|.|+++++|      +++.+++++.+...+ +..++.+++|++.||+ ++|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~~g~r   85 (524)
T 2xut_A           13 QIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVI-GVYFFPLLGGWIADRFFGKY   85 (524)
T ss_dssp             CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHH-HHHHTHHHHHHHHTTSSCSH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcch
Confidence            44456666777788888999999999999999      999999988776544 5678899999999999 865

>3qtl_D Kazal-type serine protease inhibitor SPI-1; serine protease -kazal type serine protease inhibitor comple hydrolase inhibitor; 2.60A {Carcinoscorpius rotundicauda}

Probab=97.05  E-value=0.00015  Score=50.97  Aligned_cols=26  Identities=35%  Similarity=1.017  Sum_probs=21.7

Q ss_pred             CCCCCcceeeCCCCceecCccc---ccccc
Q psy11785        262 CDHSKFNPICGGDGRTYFSACH---AGCQN  288 (308)
Q Consensus       262 C~~~~~~PvC~~~g~ty~SpC~---AGC~~  288 (308)
                      |+ ..|+||||+||.||-+.|+   |.|..
T Consensus         3 C~-~~~~PVCGsdG~tY~N~C~l~~~~c~~   31 (75)
T 3qtl_D            3 CP-HTYKPVCGANGEVYDNECFLNKAGIEP   31 (75)
T ss_dssp             EE-CCCCCEEBTTSCEESSHHHHHHTTCCB
T ss_pred             CC-CCCCceECCCCcEeCCHHHHHHhhhcC
Confidence            54 4699999999999999998   56654

>3qtl_D Kazal-type serine protease inhibitor SPI-1; serine protease -kazal type serine protease inhibitor comple hydrolase inhibitor; 2.60A {Carcinoscorpius rotundicauda}

Probab=96.54  E-value=0.00056  Score=47.94  Aligned_cols=23  Identities=26%  Similarity=0.896  Sum_probs=19.6

Q ss_pred             cCCCCCcceeeCCCCceecCccccc
Q psy11785        261 ECDHSKFNPICGGDGRTYFSACHAG  285 (308)
Q Consensus       261 ~C~~~~~~PvC~~~g~ty~SpC~AG  285 (308)
                      .|+ ..|+||| +||+||-|.|++-
T Consensus        47 ~C~-~~~~PVC-sdG~TY~N~C~~~   69 (75)
T 3qtl_D           47 VCT-EEYDPVC-VEGKIYGNRCMQS   69 (75)
T ss_dssp             CCB-CCCCCCC-SSSSCCSSHHHHH
T ss_pred             CCC-CCCCCcc-CCCeEECCHHHHh
Confidence            454 5699999 9999999999874

>2arp_F Follistatin; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Rattus norvegicus}

Probab=96.51  E-value=0.00094  Score=53.54  Aligned_cols=21  Identities=48%  Similarity=0.833  Sum_probs=18.9

Q ss_pred             CcceeeCCCCceecCcccccc
Q psy11785        266 KFNPICGGDGRTYFSACHAGC  286 (308)
Q Consensus       266 ~~~PvC~~~g~ty~SpC~AGC  286 (308)
                      .|+||||+||+||-|.|+.=+
T Consensus       113 ~~~pVCGsDg~TY~n~C~l~~  133 (152)
T 2arp_F          113 SEQSLCGNDGVTYSSACHLRK  133 (152)
T ss_dssp             STTCEEETTSCEESSHHHHHH
T ss_pred             CCCceeCCCCCEecCHhHhhH
Confidence            799999999999999998543

>1hdl_A HF6478, serine proteinase inhibitor lekti; putative serine proteinase inhibitor; NMR {Homo sapiens} SCOP: g.68.1.2 PDB: 1uuc_A

Probab=96.38  E-value=0.00011  Score=47.73  Aligned_cols=22  Identities=18%  Similarity=0.327  Sum_probs=18.8

Q ss_pred             cCCCCCcceeeCCCCceecCccc
Q psy11785        261 ECDHSKFNPICGGDGRTYFSACH  283 (308)
Q Consensus       261 ~C~~~~~~PvC~~~g~ty~SpC~  283 (308)
                      .|+ ..++||||+||+||-+.|.
T Consensus        21 ~Ct-re~~Pvcg~DGkty~NkC~   42 (55)
T 1hdl_A           21 FCP-QDKKFFQSLDGIMFINKCA   42 (55)
T ss_dssp             CCC-SCGGGGGSHHHHHHHHHHH
T ss_pred             ecC-CCCCcccCCCCCEeccHhH
Confidence            365 4589999999999999995

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*

Probab=96.23  E-value=0.00083  Score=57.59  Aligned_cols=26  Identities=31%  Similarity=0.732  Sum_probs=21.6

Q ss_pred             ccCCCCCcceeeCCCCceecCccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHAG  285 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~AG  285 (308)
                      |.++...|.||||+||.||=|.||--
T Consensus        35 C~~~~~~~~pVCGsDG~TY~n~C~L~   60 (229)
T 1nub_A           35 CPAPIGEFEKVCSNDNKTFDSSCHFF   60 (229)
T ss_dssp             SCCCSSGGGCEEETTSCEESSHHHHH
T ss_pred             CCCcccCCCCccCCCCCCccchhHHH
Confidence            55544589999999999999999854

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=96.04  E-value=0.009  Score=54.79  Aligned_cols=76  Identities=17%  Similarity=0.048  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHHHHHHHH
Q psy11785        143 YRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAITAVLYA  222 (308)
Q Consensus       143 ~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~~~~~~~  222 (308)
                      ...+..+............+|. +++++|++..+.|++.+...+ +.+++.++.|++.||+|+|  +.+.++.+...++.
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~-~~~i~~~~~G~l~dr~g~r--~~l~~~~~~~~~~~  105 (438)
T 3o7q_A           30 LLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYF-GYFIIPIPAGILMKKLSYK--AGIITGLFLYALGA  105 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-HHHHSCCCSHHHHHHHHHHHH-HHHTTHHHHHHHHHHSCHH--HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhHHHHHHH-HHHHcCCCHHHHHHHHHHHHH-HHHHHHHhHHHHHHHhcch--HHHHHHHHHHHHHH
Confidence            3334444444555566666776 666799999999998776544 5678899999999999865  44444444444433

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=96.03  E-value=0.0061  Score=56.13  Aligned_cols=80  Identities=13%  Similarity=0.008  Sum_probs=56.1

Q ss_pred             cChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785        137 KNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI  216 (308)
Q Consensus       137 ~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~  216 (308)
                      +++.+....+..+........+..++|.+.++ + ++..+.|++.+...+ +..++.++.|++.||+++|  +.+..+.+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~s~~~~g~~~~~~~~-~~~~~~~~~G~l~dr~g~r--~~l~~~~~  100 (451)
T 1pw4_A           26 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-G-FSRGDLGFALSGISI-AYGFSKFIMGSVSDRSNPR--VFLPAGLI  100 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSHHHHHHHTTSS-T-TCSSCHHHHHHHHHH-HHHHHHHHHHHHHHHSCHH--HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccHhHHHHHHHHHHH-HHHHHHHhHHHHHHhcCch--HHHHHHHH
Confidence            34556666666666666666777888877664 5 999999988776544 4678899999999999865  45544444


Q ss_pred             HHHHH
Q psy11785        217 TAVLY  221 (308)
Q Consensus       217 ~~~~~  221 (308)
                      ...++
T Consensus       101 ~~~~~  105 (451)
T 1pw4_A          101 LAAAV  105 (451)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44443

>2arp_F Follistatin; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Rattus norvegicus}

Probab=95.96  E-value=0.0022  Score=51.34  Aligned_cols=21  Identities=38%  Similarity=0.672  Sum_probs=18.5

Q ss_pred             CcceeeCCCCceecCcccccc
Q psy11785        266 KFNPICGGDGRTYFSACHAGC  286 (308)
Q Consensus       266 ~~~PvC~~~g~ty~SpC~AGC  286 (308)
                      .|+||||+||.||-|.|+.=.
T Consensus        38 ~~~pVCGsDG~tY~N~C~l~~   58 (152)
T 2arp_F           38 WKGPVCGLDGKTYRNECALLK   58 (152)
T ss_dssp             CCSCEEETTSCEESSHHHHHH
T ss_pred             CCCceEcCCCCEeCCHhHHHH
Confidence            499999999999999998643

>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens} PDB: 2kcx_A

Probab=95.70  E-value=0.0039  Score=52.47  Aligned_cols=20  Identities=40%  Similarity=0.831  Sum_probs=18.4

Q ss_pred             CCcceeeCCCCceecCcccc
Q psy11785        265 SKFNPICGGDGRTYFSACHA  284 (308)
Q Consensus       265 ~~~~PvC~~~g~ty~SpC~A  284 (308)
                      ..|+||||+||+||-|.|+.
T Consensus       170 ~~~~pVCGsDG~TY~N~C~l  189 (209)
T 3sek_C          170 SPGQELCGNNNVTYISSCHM  189 (209)
T ss_dssp             SSSCCEEETTSCEESSHHHH
T ss_pred             CCCCceeCCCCCEECCHhHH
Confidence            46999999999999999985

>1yu6_C Ovomucoid; protein proteinase inhibitor, protease, hydrolase; 1.55A {Meleagris gallopavo} SCOP: g.68.1.1 PDB: 1z7k_B*

Probab=95.67  E-value=0.0019  Score=53.56  Aligned_cols=25  Identities=36%  Similarity=0.715  Sum_probs=0.0

Q ss_pred             ccCCCCCcceeeCCCCceecCcccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHAGC  286 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~AGC  286 (308)
                      |.|+. .|+||||+||+||- .|++=+
T Consensus        20 ~~C~~-~~~PVCGsDG~TY~-~C~l~~   44 (185)
T 1yu6_C           20 LVCTE-DLRPICGTDGVTHS-ECLLCA   44 (185)
T ss_dssp             ---------------------------
T ss_pred             cCCCC-CCcceECCCCCChH-HHHhhH
Confidence            77874 59999999999999 999743

>1yu6_C Ovomucoid; protein proteinase inhibitor, protease, hydrolase; 1.55A {Meleagris gallopavo} SCOP: g.68.1.1 PDB: 1z7k_B*

Probab=95.63  E-value=0.002  Score=53.41  Aligned_cols=24  Identities=42%  Similarity=0.934  Sum_probs=0.0

Q ss_pred             ccCCCCCcceeeCCCCceecCcccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHA  284 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~A  284 (308)
                      |.|+ ..|+||||+||.||-+.|++
T Consensus        84 ~~C~-~~~~PVCGsdG~TY~N~C~l  107 (185)
T 1yu6_C           84 ILCN-KALNPVCGTDGVTYDNECVL  107 (185)
T ss_dssp             -------------------------
T ss_pred             CcCC-CCCcceEccCCCEEehhhHh
Confidence            6786 46999999999999999997

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=95.56  E-value=0.024  Score=50.92  Aligned_cols=61  Identities=7%  Similarity=0.044  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        144 RTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       144 ~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ..+..+........+...+|.+ .+++|.++.+.+++.+...+ +..++.++.|++.||+++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r   65 (375)
T 2gfp_A            5 LVLLVAVGQMAQTIYIPAIADM-ARDLNVREGAVQSVMGAYLL-TYGVSQLFYGPISDRVGRR   65 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-HTTSSSTTHHHHHHHHHHHH-HHHHHHTTHHHHHTTSCCC
T ss_pred             HHHHHHHHHHHHHHHhhhhHHH-HHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCc
Confidence            4445555566666667777775 45799999999988766554 4578899999999999865

>3sek_C Follistatin-related protein 3; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, follistatin domain (FSD); HET: NAG; 2.40A {Homo sapiens} PDB: 2kcx_A

Probab=95.37  E-value=0.0046  Score=52.07  Aligned_cols=24  Identities=38%  Similarity=0.836  Sum_probs=21.1

Q ss_pred             CCcceeeCCCCceecCccc---ccccc
Q psy11785        265 SKFNPICGGDGRTYFSACH---AGCQN  288 (308)
Q Consensus       265 ~~~~PvC~~~g~ty~SpC~---AGC~~  288 (308)
                      ..|+||||+||.||-|.|+   |-|..
T Consensus        94 ~~~~PVCGSDG~TY~N~C~L~~a~C~~  120 (209)
T 3sek_C           94 PARLQVCGSDGATYRDECELRAARCRG  120 (209)
T ss_dssp             CTTCCEEETTSCEESSHHHHHHHHHTT
T ss_pred             CCCCCEECCCCCEeCCHHHHHHHHHhc
Confidence            3799999999999999998   77764

>3b4v_C Follistatin-like 3; ligand-inhibitor signalling complex, cleavage on PAIR of BAS residues, glycoprotein, growth factor, hormone, secreted; HET: NAG; 2.48A {Homo sapiens}

Probab=95.37  E-value=0.0057  Score=52.62  Aligned_cols=24  Identities=38%  Similarity=0.801  Sum_probs=20.3

Q ss_pred             CCC--CCcceeeCCCCceecCccccc
Q psy11785        262 CDH--SKFNPICGGDGRTYFSACHAG  285 (308)
Q Consensus       262 C~~--~~~~PvC~~~g~ty~SpC~AG  285 (308)
                      |+.  ..|+||||+||+||-|.||.-
T Consensus       174 Cp~~~~~~~PVCGsDG~TY~N~C~l~  199 (237)
T 3b4v_C          174 CPVPSSPGQELCGNNNVTYISSCHMR  199 (237)
T ss_dssp             CCCCSSSCCCEEETTSCEESSHHHHH
T ss_pred             CCccccCCCceeCCCCCEecCHhHHH
Confidence            554  269999999999999999963

>3b4v_C Follistatin-like 3; ligand-inhibitor signalling complex, cleavage on PAIR of BAS residues, glycoprotein, growth factor, hormone, secreted; HET: NAG; 2.48A {Homo sapiens}

Probab=95.28  E-value=0.0046  Score=53.18  Aligned_cols=23  Identities=39%  Similarity=0.866  Sum_probs=20.7

Q ss_pred             CcceeeCCCCceecCccc---ccccc
Q psy11785        266 KFNPICGGDGRTYFSACH---AGCQN  288 (308)
Q Consensus       266 ~~~PvC~~~g~ty~SpC~---AGC~~  288 (308)
                      .|+||||+||.||-|.|+   |-|+.
T Consensus       104 ~~~PVCGsDG~TY~N~C~l~~a~C~~  129 (237)
T 3b4v_C          104 ARLQVCGSDGATYRDECELRAARCRG  129 (237)
T ss_dssp             SSCCEEETTSCEESSHHHHHHHHHTT
T ss_pred             CCCceeCCCCCCccCHhHHHHHHHhc
Confidence            699999999999999999   77864

>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens} PDB: 2b0u_C* 2p6a_D

Probab=95.13  E-value=0.0058  Score=54.01  Aligned_cols=27  Identities=37%  Similarity=0.886  Sum_probs=19.3

Q ss_pred             CCC-CCcceeeCCCCceecCccc---ccccc
Q psy11785        262 CDH-SKFNPICGGDGRTYFSACH---AGCQN  288 (308)
Q Consensus       262 C~~-~~~~PvC~~~g~ty~SpC~---AGC~~  288 (308)
                      |+. ..|+||||+||+||-+.|+   |-|..
T Consensus       245 Cp~~~~~~pVCgsdg~TY~n~C~l~~a~C~~  275 (288)
T 3hh2_C          245 CPDSKSDEPVCASDNATYASECAMKEAACSS  275 (288)
T ss_dssp             CC-----CCEEETTSCEESSHHHHHHHHHHH
T ss_pred             CCCccCCCccCCCCCCEeCCHhHHhHHHhcC
Confidence            443 3699999999999999998   55654

>3hh2_C Follistatin; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Homo sapiens} PDB: 2b0u_C* 2p6a_D

Probab=95.12  E-value=0.0064  Score=53.74  Aligned_cols=30  Identities=43%  Similarity=0.788  Sum_probs=20.0

Q ss_pred             CCCCCCccCCCCCcceeeCCCCceecCccccc
Q psy11785        254 CATTHGCECDHSKFNPICGGDGRTYFSACHAG  285 (308)
Q Consensus       254 Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~AG  285 (308)
                      |+..  |.=..+.++||||+||+||-|.|+.-
T Consensus       163 C~~~--Cp~~~~~~~pVCGsDg~TY~n~C~l~  192 (288)
T 3hh2_C          163 CNRI--CPEPASSEQYLCGNDGVTYSSACHLR  192 (288)
T ss_dssp             CCCC--CCC-----CCEEETTSCEESSHHHHH
T ss_pred             CCCC--CCCccCCCCceECCCCCEEcCHHHHH
Confidence            5555  43322358999999999999999953

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=94.32  E-value=0.038  Score=51.53  Aligned_cols=79  Identities=11%  Similarity=-0.081  Sum_probs=50.7

Q ss_pred             cccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q psy11785          7 YTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLA   86 (308)
Q Consensus         7 ~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~   86 (308)
                      .|+...+..|.+|.+.|+..+|+..+...+|..+++.+...+.+....            .....+...|++.+++.++.
T Consensus       388 ~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~------------~~~~~~~~~~~i~~~~~~~~  455 (491)
T 4gc0_A          388 GPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWL------------VAHFHNGFSYWIYGCMGVLA  455 (491)
T ss_dssp             THHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHH------------HHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HhhhhhhHHHHHHHHHHHHH
Confidence            356678999999999999999999988888888887776655431000            00001233455666655555


Q ss_pred             HH-HHHhccCCC
Q psy11785         87 AV-AMFMFPKTL   97 (308)
Q Consensus        87 ~i-~~~~~p~~~   97 (308)
                      .+ .++++||+.
T Consensus       456 ~i~~~~~~PETk  467 (491)
T 4gc0_A          456 ALFMWKFVPETK  467 (491)
T ss_dssp             HHHHHHHCCCCT
T ss_pred             HHHHHheecCCC
Confidence            44 456677763

>3tjq_A Serine protease HTRA1; hydrolase; 2.00A {Homo sapiens}

Probab=94.21  E-value=0.011  Score=46.43  Aligned_cols=23  Identities=39%  Similarity=1.055  Sum_probs=19.7

Q ss_pred             ccCCCCCcceeeCCCCceecCcccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHA  284 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~A  284 (308)
                      |.|.  .+.||||+||+||-|.|+-
T Consensus        92 C~c~--~~~pvCgsdG~tY~n~c~l  114 (140)
T 3tjq_A           92 CVCA--SSEPVCGSDANTYANLCQL  114 (140)
T ss_dssp             EEES--CCSCEEBSSSCEESSHHHH
T ss_pred             cccc--cCCCCcCCCCcCcCChhHH
Confidence            6775  5899999999999999854

>4gi3_C Greglin; kazal type inhibitor, hydrolase-hydrolase inhibitor complex; 1.75A {Schistocerca gregaria}

Probab=93.63  E-value=0.014  Score=40.81  Aligned_cols=23  Identities=26%  Similarity=0.855  Sum_probs=17.6

Q ss_pred             CCcceeeCCCC----ceecCccc---cccc
Q psy11785        265 SKFNPICGGDG----RTYFSACH---AGCQ  287 (308)
Q Consensus       265 ~~~~PvC~~~g----~ty~SpC~---AGC~  287 (308)
                      ..|+||||.|+    +||=+.|.   |-|.
T Consensus        27 ~iY~PVCGsDg~~~~~tFsNeCemr~a~C~   56 (83)
T 4gi3_C           27 LIYAPVCVEDSNQDFYLFVNECEVRKCGCE   56 (83)
T ss_dssp             CCCCCEEEEETTSCEEEESSHHHHHHHHHH
T ss_pred             ccccceeccCCCccccEEccHhHhhHHhhc
Confidence            57999999887    36778885   4554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	308
d1ldtl_	46	g.68.1.1 (L:) Leech derived tryptase inhibitor (LD	4e-10
d2erwa1	53	g.68.1.1 (A:4-56) Blood-sucking insect-derived try	1e-08
d2f3ci1	46	g.68.1.1 (I:5-50) Blood-sucking insect-derived try	6e-08
d1tbrr2	52	g.68.1.1 (R:52-103) Blood-sucking insect-derived t	8e-07
d1nuba3	58	g.68.1.1 (A:78-135) Domain of BM-40/SPARC/osteonec	4e-06
d1pcea_	60	g.68.1.1 (A:) PEC-60 peptide {Pig (Sus scrofa) [Ta	2e-05
d1lr7a2	48	g.68.1.1 (A:89-136) Domain of follistatin {Rat (Ra	7e-05
d1hpta_	56	g.68.1.1 (A:) Secretory trypsin inhibitor {Human (	1e-04
d1tgsi_	56	g.68.1.1 (I:) Secretory trypsin inhibitor {Pig (Su	1e-04
d2busa_	57	g.68.1.1 (A:) Seminal plasma inhibitor IIa {Cow (B	7e-04
d1z7kb1	62	g.68.1.1 (B:2-63) Ovomucoid domains {Turkey (Melea	8e-04
d1r0ri_	51	g.68.1.1 (I:) Ovomucoid domains {Turkey (Meleagris	0.001
d1h0za_	68	g.68.1.2 (A:) Serine proteinase inhibitor lekti {H	0.003

>d1ldtl_ g.68.1.1 (L:) Leech derived tryptase inhibitor (LDTI-C) {Medicinal leech (Hirudo medicinalis) [TaxId: 6421]} Length = 46

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Leech derived tryptase inhibitor (LDTI-C)
species: Medicinal leech (Hirudo medicinalis) [TaxId: 6421]

 Score = 52.1 bits (125), Expect = 4e-10
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 259 GCECDHSKFNPICGGDGRTYFSACHAGCQNISS 291
            C C      P+CG DGRTY ++C A C  +S 
Sbjct: 3   VCACPKI-LKPVCGSDGRTYANSCIARCNGVSI 34

>d2erwa1 g.68.1.1 (A:4-56) Blood-sucking insect-derived tryptase inhibitor {Triatoma infestans [TaxId: 30076]} Length = 53

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Blood-sucking insect-derived tryptase inhibitor
species: Triatoma infestans [TaxId: 30076]

 Score = 48.0 bits (114), Expect = 1e-08
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 260 CECDHSKFNPICGGDGRTYFSACHAGCQN 288
           C C    + P+CG DG+TY + C   C  
Sbjct: 3   CACF-RNYVPVCGSDGKTYGNPCMLNCAA 30

>d2f3ci1 g.68.1.1 (I:5-50) Blood-sucking insect-derived tryptase inhibitor {Triatoma infestans [TaxId: 30076]} Length = 46

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Blood-sucking insect-derived tryptase inhibitor
species: Triatoma infestans [TaxId: 30076]

 Score = 46.0 bits (109), Expect = 6e-08
 Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 260 CECDHSKFNPICGGDGRTYFSACHAGCQN 288
           C C     + +CG DG TY + C   C  
Sbjct: 2   CACP-RVLHRVCGSDGNTYSNPCTLDCAK 29

>d1tbrr2 g.68.1.1 (R:52-103) Blood-sucking insect-derived tryptase inhibitor {Bug (Rhodnius prolixus), rhodniin [TaxId: 13249]} Length = 52

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Blood-sucking insect-derived tryptase inhibitor
species: Bug (Rhodnius prolixus), rhodniin [TaxId: 13249]

 Score = 42.9 bits (101), Expect = 8e-07
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 261 ECDHSKFNPICGGDGRTYFSACHAGCQN 288
           ECD  ++ P+CG D  TY + C   C +
Sbjct: 8   ECDGDEYKPVCGSDDITYDNNCRLECAS 35

>d1nuba3 g.68.1.1 (A:78-135) Domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (97), Expect = 4e-06
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 5/45 (11%)

Query: 254 CATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISSIDGK 295
             T+  C     +F  +C  D +T+ S+CH     C    +  G 
Sbjct: 3   DPTS--CPAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKGH 45

>d1pcea_ g.68.1.1 (A:) PEC-60 peptide {Pig (Sus scrofa) [TaxId: 9823]} Length = 60

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: PEC-60 peptide
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 39.9 bits (93), Expect = 2e-05
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 252 PMCATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
           P+C            ++P+CG DG TY S C    A  +N   I
Sbjct: 9   PICEHMTESPDCSRIYDPVCGTDGVTYESECKLCLARIENKQDI 52

>d1lr7a2 g.68.1.1 (A:89-136) Domain of follistatin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 48

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Domain of follistatin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.6 bits (87), Expect = 7e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 4/36 (11%)

Query: 260 CECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
           C    +   P+CG DG+TY + C    A C+    +
Sbjct: 5   CSN-ITWKGPVCGLDGKTYRNECALLKARCKEQPEL 39

>d1hpta_ g.68.1.1 (A:) Secretory trypsin inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Secretory trypsin inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (85), Expect = 1e-04
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 7/40 (17%)

Query: 260 CECDHSK----FNPICGGDGRTYFSACH---AGCQNISSI 292
           C  + +     + P+CG DG TY + C       +  +SI
Sbjct: 9   CYNELNGCTYEYRPVCGTDGDTYPNECVLCFENRKRQTSI 48

>d1tgsi_ g.68.1.1 (I:) Secretory trypsin inhibitor {Pig (Sus scrofa) [TaxId: 9823]} Length = 56

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Secretory trypsin inhibitor
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 36.8 bits (85), Expect = 1e-04
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 7/40 (17%)

Query: 260 CECDHSK----FNPICGGDGRTYFSACH---AGCQNISSI 292
           C  + S     +NP+CG DG TY + C       +  + +
Sbjct: 9   CTSEVSGCPKIYNPVCGTDGITYSNECVLCSENKKRQTPV 48

>d2busa_ g.68.1.1 (A:) Seminal plasma inhibitor IIa {Cow (Bos taurus) [TaxId: 9913]} Length = 57

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Seminal plasma inhibitor IIa
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 34.9 bits (80), Expect = 7e-04
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 4/36 (11%)

Query: 260 CECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
             C   + NP CG +G TY + C    A  ++   I
Sbjct: 15  VYCT-RESNPHCGSNGETYGNKCAFCKAVMKSGGKI 49

>d1z7kb1 g.68.1.1 (B:2-63) Ovomucoid domains {Turkey (Meleagris gallopavo) [TaxId: 9103]} Length = 62

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Ovomucoid domains
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

 Score = 34.9 bits (80), Expect = 8e-04
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 249 SFEPMCATTHG---CECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
           S  P   +  G     C+ +  NP+CG DG TY + C       +  +S+
Sbjct: 6   SRYPNTTSEEGKVMILCNKA-LNPVCGTDGVTYDNECVLCAHNLEQGTSV 54

>d1r0ri_ g.68.1.1 (I:) Ovomucoid domains {Turkey (Meleagris gallopavo) [TaxId: 9103]} Length = 51

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Ovomucoid domains
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

 Score = 34.1 bits (78), Expect = 0.001
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 254 CATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISSI 292
           C+      C   ++ P+CG D +TY + C+   A  ++  ++
Sbjct: 3   CSEYPKPACT-LEYRPLCGSDNKTYGNKCNFCNAVVESNGTL 43

>d1h0za_ g.68.1.2 (A:) Serine proteinase inhibitor lekti {Human (Homo sapiens) [TaxId: 9606]} Length = 68

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Serine proteinase inhibitor lekti
domain: Serine proteinase inhibitor lekti
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (76), Expect = 0.003
 Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 10/56 (17%)

Query: 249 SFEPMCA----TTHGCE--CDHSKFNPICGGDGRTYFSAC---HAGCQNISSIDGK 295
           S+  +C          +  C   + +PI G DG+ + + C       Q       K
Sbjct: 7   SYAELCNEYRKLVRNGKLAC-TRENDPIQGPDGKVHGNTCSMCEVFFQAEEEEKKK 61

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	308
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.63
d1ldtl_	46	Leech derived tryptase inhibitor (LDTI-C) {Medicin	99.33
d2erwa1	53	Blood-sucking insect-derived tryptase inhibitor {T	99.01
d2f3ci1	46	Blood-sucking insect-derived tryptase inhibitor {T	98.86
d1lr7a2	48	Domain of follistatin {Rat (Rattus norvegicus) [Ta	98.43
d1tbrr2	52	Blood-sucking insect-derived tryptase inhibitor {B	98.39
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	98.28
d1nuba3	58	Domain of BM-40/SPARC/osteonectin {Human (Homo sap	98.1
d1z7kb1	62	Ovomucoid domains {Turkey (Meleagris gallopavo) [T	97.85
d1r0ri_	51	Ovomucoid domains {Turkey (Meleagris gallopavo) [T	97.85
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	97.83
d2busa_	57	Seminal plasma inhibitor IIa {Cow (Bos taurus) [Ta	97.82
d1pcea_	60	PEC-60 peptide {Pig (Sus scrofa) [TaxId: 9823]}	97.8
d1tgsi_	56	Secretory trypsin inhibitor {Pig (Sus scrofa) [Tax	97.79
d1hpta_	56	Secretory trypsin inhibitor {Human (Homo sapiens)	97.76
d1h0za_	68	Serine proteinase inhibitor lekti {Human (Homo sap	97.38
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	96.44
d1hdla_	55	Serine proteinase inhibitor lekti {Human (Homo sap	95.88
d1n1ua_	29	Kalata B1 {African plant (Oldenlandia affinis) [Ta	81.35

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=3e-16  Score=144.21  Aligned_cols=190  Identities=13%  Similarity=0.074  Sum_probs=134.2

Q ss_pred             ccccccccchhhhcCccCCCCchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q psy11785          2 GQTAVYTLGIPYIDDNVANRESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAV   81 (308)
Q Consensus         2 G~a~~~~lg~a~i~d~~~~~~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~   81 (308)
                      |.+..++...+++.|++|+++|++++|++..+..+|.++||++++.+...+.                 .|+..|++.++
T Consensus       129 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~-----------------~w~~~~~~~~~  191 (447)
T d1pw4a_         129 FQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFN-----------------DWHAALYMPAF  191 (447)
T ss_dssp             HHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTC-----------------CSTTCTHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhh-----------------cccccchhhhh
Confidence            3456778889999999999999999999999999999999999998876432                 24555666666


Q ss_pred             HHHHHHHHHHhccCCCCCCCCccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhH
Q psy11785         82 FLMLAAVAMFMFPKTLTKASPVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTF  161 (308)
Q Consensus        82 ~~ll~~i~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~  161 (308)
                      +.++.++..+.++++.|+.......++.+.......+++.+++........+++++|+.++...+..++.....+++.++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (447)
T d1pw4a_         192 CAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDW  271 (447)
T ss_dssp             HHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcccchhhcccchhhhhhhhcccchhhccccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhh
Confidence            66666666666666666544322111100000000001111112223345678999999999988889999999999999


Q ss_pred             HHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccc
Q psy11785        162 LPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARF  209 (308)
Q Consensus       162 ~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~  209 (308)
                      +|.|+++.++++..++++......+ ..++|.+++|++.||++++.+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~  318 (447)
T d1pw4a_         272 SPTYLKEVKHFALDKSSWAYFLYEY-AGIPGTLLCGWMSDKVFRGNRG  318 (447)
T ss_dssp             HHHHBTTBSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHTSTTCHH
T ss_pred             hhhhcccccccccchhhhhhhcchh-hhhhhhhhhhhhhhhccccccc
Confidence            9999999999999999887765543 5678999999999999866443

>d1ldtl_ g.68.1.1 (L:) Leech derived tryptase inhibitor (LDTI-C) {Medicinal leech (Hirudo medicinalis) [TaxId: 6421]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Leech derived tryptase inhibitor (LDTI-C)
species: Medicinal leech (Hirudo medicinalis) [TaxId: 6421]

Probab=99.33  E-value=5.4e-14  Score=87.69  Aligned_cols=39  Identities=36%  Similarity=0.876  Sum_probs=30.9

Q ss_pred             ccCCCCCcceeeCCCCceecCccccccccccccCCCceEEEeeEe
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHAGCQNISSIDGKVQTLLFIEA  304 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~~~~~~~~~~~~~~  304 (308)
                      |.|+. .|+||||.||+||+|||+|+|..+.     ..++..||+
T Consensus         4 C~C~~-~y~PVCG~DG~TY~N~C~A~C~gv~-----~~~~G~C~~   42 (46)
T d1ldtl_           4 CACPK-ILKPVCGSDGRTYANSCIARCNGVS-----IKSEGSCPT   42 (46)
T ss_dssp             CEEEC-CCCCEECSTTCEESSHHHHHHHCCC-----CCEESCCSS
T ss_pred             ccCCC-cccCccCCCCCEECCHHHhCcCCcc-----ceEcccCCC
Confidence            99974 6999999999999999999997543     234455554

>d2erwa1 g.68.1.1 (A:4-56) Blood-sucking insect-derived tryptase inhibitor {Triatoma infestans [TaxId: 30076]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Blood-sucking insect-derived tryptase inhibitor
species: Triatoma infestans [TaxId: 30076]

Probab=99.01  E-value=4e-11  Score=77.46  Aligned_cols=31  Identities=35%  Similarity=0.993  Sum_probs=27.2

Q ss_pred             ccCCCCCcceeeCCCCceecCccccccccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHAGCQNISS  291 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~  291 (308)
                      |.|+. .|+||||+||+||.|+||++|..-..
T Consensus         3 C~C~~-~y~PVCGsDG~TY~N~C~l~~~~c~~   33 (53)
T d2erwa1           3 CACFR-NYVPVCGSDGKTYGNPCMLNCAAQTK   33 (53)
T ss_dssp             TCCCC-CCCCEEETTSCEESSHHHHHHHHHHT
T ss_pred             CcCCC-CCccccCCCCCEeCCHHHhHHHHhcc
Confidence            89974 69999999999999999999976443

>d2f3ci1 g.68.1.1 (I:5-50) Blood-sucking insect-derived tryptase inhibitor {Triatoma infestans [TaxId: 30076]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Blood-sucking insect-derived tryptase inhibitor
species: Triatoma infestans [TaxId: 30076]

Probab=98.86  E-value=1.8e-10  Score=72.06  Aligned_cols=32  Identities=31%  Similarity=0.888  Sum_probs=27.6

Q ss_pred             CccCCCCCcceeeCCCCceecCccccccccccc
Q psy11785        259 GCECDHSKFNPICGGDGRTYFSACHAGCQNISS  291 (308)
Q Consensus       259 ~C~C~~~~~~PvC~~~g~ty~SpC~AGC~~~~~  291 (308)
                      ||.|+ ..|+||||+||+||.|+||..|..-..
T Consensus         1 dC~Cp-~~~~PVCGsDg~TY~N~C~l~~~~c~~   32 (46)
T d2f3ci1           1 DCACP-RVLHRVCGSDGNTYSNPCTLDCAKHEG   32 (46)
T ss_dssp             CCEEE-CCCCCEEETTSCEESSHHHHHHHHHHH
T ss_pred             CCcCC-CCCcccCCCCCCEeCCHHHHhHHHhcC
Confidence            49997 469999999999999999999976443

>d1lr7a2 g.68.1.1 (A:89-136) Domain of follistatin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Domain of follistatin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.43  E-value=2e-08  Score=62.91  Aligned_cols=35  Identities=37%  Similarity=0.822  Sum_probs=28.7

Q ss_pred             CCCCCCccCCCCCcceeeCCCCceecCccc---cccccccc
Q psy11785        254 CATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQNISS  291 (308)
Q Consensus       254 Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~---AGC~~~~~  291 (308)
                      |+.+  |.+. ..++||||+||+||-|.||   |.|.....
T Consensus         1 C~~~--C~~~-~~~~PVCGsDg~TY~n~C~l~~~~C~~~~~   38 (48)
T d1lr7a2           1 CAPD--CSNI-TWKGPVCGLDGKTYRNECALLKARCKEQPE   38 (48)
T ss_dssp             ECCC--GGGC-CCCSCEEETTSCEESSHHHHHHHHHHTCTT
T ss_pred             CcCC--CCCC-CCCCCeECCCCCEecchhheeHhhhcCCCc
Confidence            6777  8764 4689999999999999999   88876543

>d1tbrr2 g.68.1.1 (R:52-103) Blood-sucking insect-derived tryptase inhibitor {Bug (Rhodnius prolixus), rhodniin [TaxId: 13249]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Blood-sucking insect-derived tryptase inhibitor
species: Bug (Rhodnius prolixus), rhodniin [TaxId: 13249]

Probab=98.39  E-value=4.5e-08  Score=62.42  Aligned_cols=29  Identities=38%  Similarity=0.840  Sum_probs=24.6

Q ss_pred             CCCcceeeCCCCceecCcccccccccccc
Q psy11785        264 HSKFNPICGGDGRTYFSACHAGCQNISSI  292 (308)
Q Consensus       264 ~~~~~PvC~~~g~ty~SpC~AGC~~~~~~  292 (308)
                      .+.|+||||+||+||-|+|+..+..-...
T Consensus        11 ~~~~~PVCGsDg~TY~n~C~l~~~~C~~~   39 (52)
T d1tbrr2          11 GDEYKPVCGSDDITYDNNCRLECASISSS   39 (52)
T ss_dssp             TCCCCCEEETTTEEESSHHHHHHHTTTTS
T ss_pred             ccCCcccCCCCCCEecCHhHHHHHHhcCC
Confidence            47899999999999999999888765433

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=98.28  E-value=6.9e-07  Score=78.44  Aligned_cols=71  Identities=11%  Similarity=0.119  Sum_probs=62.5

Q ss_pred             hhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        135 LLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       135 Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      .+|||.|+...+..++.......+..++|.|+++++|+|+.+.|++.+...+ +..++.++.|++.||+|+|
T Consensus         3 ~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l-~~~i~~~~~G~l~Dr~grr   73 (417)
T d1pv7a_           3 YLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISL-FSLLFQPLFGLLSDKLGLR   73 (417)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHTHHHHHHHHHHHTTC
T ss_pred             cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCch
Confidence            4789999999999888888888888899999999999999999998876654 4577889999999999976

>d1nuba3 g.68.1.1 (A:78-135) Domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=2.5e-07  Score=59.87  Aligned_cols=33  Identities=30%  Similarity=0.744  Sum_probs=27.4

Q ss_pred             CCCCCCccCCCCCcceeeCCCCceecCccc---ccccc
Q psy11785        254 CATTHGCECDHSKFNPICGGDGRTYFSACH---AGCQN  288 (308)
Q Consensus       254 Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~---AGC~~  288 (308)
                      |..+  |....+.|+||||+||+||-|.||   +.|..
T Consensus         3 Cp~~--CP~~~~~~~pVCgsdg~TY~~~C~l~~~~C~~   38 (58)
T d1nuba3           3 DPTS--CPAPIGEFEKVCSNDNKTFDSSCHFFATKCTL   38 (58)
T ss_dssp             CGGG--SCCCSSGGGCEEETTSCEESSHHHHHHHHHHT
T ss_pred             CCCc--CCCCCCCcCcccCCCCeEcCccCHHHHhhhcC
Confidence            5555  765567899999999999999998   89964

>d1z7kb1 g.68.1.1 (B:2-63) Ovomucoid domains {Turkey (Meleagris gallopavo) [TaxId: 9103]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Ovomucoid domains
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

Probab=97.85  E-value=1.2e-06  Score=57.72  Aligned_cols=24  Identities=42%  Similarity=0.934  Sum_probs=21.4

Q ss_pred             ccCCCCCcceeeCCCCceecCcccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHA  284 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~A  284 (308)
                      |.|+ ..|+||||+||+||-|.|+-
T Consensus        20 ~~Cp-~~~~PVCGsDG~TY~N~C~l   43 (62)
T d1z7kb1          20 ILCN-KALNPVCGTDGVTYDNECVL   43 (62)
T ss_dssp             ECEE-CCCCCEEETTSCEESSHHHH
T ss_pred             eECC-CCCCccCCCCCCCccCHhHH
Confidence            7887 46999999999999999974

>d1r0ri_ g.68.1.1 (I:) Ovomucoid domains {Turkey (Meleagris gallopavo) [TaxId: 9103]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Ovomucoid domains
species: Turkey (Meleagris gallopavo) [TaxId: 9103]

Probab=97.85  E-value=1.9e-06  Score=54.35  Aligned_cols=28  Identities=32%  Similarity=0.828  Sum_probs=22.7

Q ss_pred             ccCCCCCcceeeCCCCceecCccc---ccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACH---AGCQN  288 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~---AGC~~  288 (308)
                      ..|+ ..|+||||+||+||-+.|+   |-|+.
T Consensus         9 ~~C~-~~~~PVCGsDG~TY~N~C~l~~~~C~~   39 (51)
T d1r0ri_           9 PACT-LEYRPLCGSDNKTYGNKCNFCNAVVES   39 (51)
T ss_dssp             SEEE-CCCCCEEETTSCEESSHHHHHHHHHHT
T ss_pred             CCCC-CCccccCCCCCCCccCHhHHHHHHhcC
Confidence            4576 5799999999999999996   55643

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=8.5e-06  Score=71.18  Aligned_cols=152  Identities=12%  Similarity=0.065  Sum_probs=73.6

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q psy11785         22 ESPLYFAITIGVRILGPSLGFILGSFCTRLYVDLSIPSDITPSDPRWIGAWWLGLVLVAVFLMLAAVAMFMFPKTLTKAS  101 (308)
Q Consensus        22 ~~~~~~gi~~~~~~~Gp~lG~~lGg~ll~~~v~~~~~~~~~~~~~~W~gaWw~~fii~g~~~ll~~i~~~~~p~~~p~~~  101 (308)
                      ++.+..+........|.++|+.+++++.+..                   ||..+...+....+..+..+++.++.++.+
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (417)
T d1pv7a_         135 RSNFEFGRARMFGCVGWALGASIVGIMFTIN-------------------NQFVFWLGSGCALILAVLLFFAKTDAPSSA  195 (417)
T ss_dssp             HHSCCHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------HHHHHHHHHHHHHHHHHHHHSSCCCSCSSS
T ss_pred             hhHHHHHHHhhhhcccccccccccccccccc-------------------ccccccchhhHHHHHHHHHHHHhcccccch
Confidence            3455667777888889999999999887531                   444444444444444444333333323222


Q ss_pred             CccCCcccccCCCccccccCCCCCCcchHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH---hCCCccccc
Q psy11785        102 PVNGTTTVATLPTKKESNQKNPSLKDFPKAVKRLLKNDILMYRTASSVLHILPIAGLYTFLPKYFETQ---FRLPSHTAN  178 (308)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~~P~yl~~~---~gls~~~ag  178 (308)
                      +++++++          + .+  .+......++.++++......+...........+....+.+....   .+.+....+
T Consensus       196 ~~~~~~~----------~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (417)
T d1pv7a_         196 TVANAVG----------A-NH--SAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFG  262 (417)
T ss_dssp             CSSHHHH----------S-CC--CCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHH
T ss_pred             hhhhhhh----------h-hc--ccccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhc
Confidence            1111000          0 00  011223344555555544444443433333343444444333221   222333333


Q ss_pred             ccchhhhhhhhHHHhhhhheehhhccCC
Q psy11785        179 MVSGVGGILVMGIGIILSGVFILKFKPN  206 (308)
Q Consensus       179 l~~g~~~i~~~~iG~~lgG~l~~r~~~~  206 (308)
                      ...... ..+..++..+.+++.||++++
T Consensus       263 ~~~~~~-~~~~~~~~~~~~~l~~r~~~~  289 (417)
T d1pv7a_         263 YVTTMG-ELLNASIMFFAPLIINRIGGK  289 (417)
T ss_dssp             HHHHHH-HHHHHHHHTTHHHHHHHHCHH
T ss_pred             cccccc-ccccccchhhhhhhhcccccc
Confidence            333222 234567788889999998754

>d2busa_ g.68.1.1 (A:) Seminal plasma inhibitor IIa {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Seminal plasma inhibitor IIa
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.82  E-value=2.4e-06  Score=55.21  Aligned_cols=29  Identities=34%  Similarity=0.647  Sum_probs=24.3

Q ss_pred             ccCCCCCcceeeCCCCceecCccc---cccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACH---AGCQNI  289 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~---AGC~~~  289 (308)
                      |.|+ ..|+||||+||+||-|.|+   |-|...
T Consensus        15 ~~C~-~~~~PVCGsdG~TY~N~C~l~~~~c~~~   46 (57)
T d2busa_          15 VYCT-RESNPHCGSNGETYGNKCAFCKAVMKSG   46 (57)
T ss_dssp             SCCS-SSSCCEEETTTEEESCHHHHHHHHTTSS
T ss_pred             CcCC-CCcCccCCCCCCEecCHhHHHHHHhCCC
Confidence            6786 5699999999999999998   667643

>d1pcea_ g.68.1.1 (A:) PEC-60 peptide {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: PEC-60 peptide
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.80  E-value=3.7e-06  Score=54.87  Aligned_cols=23  Identities=43%  Similarity=1.035  Sum_probs=20.0

Q ss_pred             CCCCCcceeeCCCCceecCccccc
Q psy11785        262 CDHSKFNPICGGDGRTYFSACHAG  285 (308)
Q Consensus       262 C~~~~~~PvC~~~g~ty~SpC~AG  285 (308)
                      |+ ..|+||||+||+||-|.|+--
T Consensus        20 C~-~~~~PVCGsDG~TY~N~C~l~   42 (60)
T d1pcea_          20 CS-RIYDPVCGTDGVTYESECKLC   42 (60)
T ss_dssp             CT-TCCCCEEETTSCEESSHHHHH
T ss_pred             CC-CCCcccCCCCCCEeccHhHHH
Confidence            65 569999999999999999743

>d1tgsi_ g.68.1.1 (I:) Secretory trypsin inhibitor {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Secretory trypsin inhibitor
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.79  E-value=2.7e-06  Score=54.74  Aligned_cols=27  Identities=37%  Similarity=0.874  Sum_probs=21.8

Q ss_pred             cCCCCCcceeeCCCCceecCccc---ccccc
Q psy11785        261 ECDHSKFNPICGGDGRTYFSACH---AGCQN  288 (308)
Q Consensus       261 ~C~~~~~~PvC~~~g~ty~SpC~---AGC~~  288 (308)
                      .|+ ..|+||||+||+||-|.|+   |-|..
T Consensus        15 ~C~-~~~~PVCGsdG~TY~N~C~l~~~~C~~   44 (56)
T d1tgsi_          15 GCP-KIYNPVCGTDGITYSNECVLCSENKKR   44 (56)
T ss_dssp             SEE-CCCCCEEETTSCEESSHHHHHHHHHTC
T ss_pred             CCC-CCCCccCCCCCCEeccHhHHHHHHhcC
Confidence            465 5799999999999999997   45543

>d1hpta_ g.68.1.1 (A:) Secretory trypsin inhibitor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Ovomucoid domain III-like
domain: Secretory trypsin inhibitor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=7.3e-06  Score=52.68  Aligned_cols=32  Identities=34%  Similarity=0.789  Sum_probs=23.9

Q ss_pred             ccCCCCCCCccCCCCCcceeeCCCCceecCcccc
Q psy11785        251 EPMCATTHGCECDHSKFNPICGGDGRTYFSACHA  284 (308)
Q Consensus       251 ~~~Cn~~~~C~C~~~~~~PvC~~~g~ty~SpC~A  284 (308)
                      .+.|... ...|+ ..|+||||+||+||-|.|+-
T Consensus         6 ~~~C~~~-~~~C~-~~~~PVCGsdG~TY~N~C~l   37 (56)
T d1hpta_           6 EAKCYNE-LNGCT-YEYRPVCGTDGDTYPNECVL   37 (56)
T ss_dssp             CCCCTTC-SSCCC-CCCBCEEETTSCEESBHHHH
T ss_pred             CCcCCCC-CCCCC-CCCCcccCCCCcEeccHhHH
Confidence            3456432 03476 57999999999999999975

>d1h0za_ g.68.1.2 (A:) Serine proteinase inhibitor lekti {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Serine proteinase inhibitor lekti
domain: Serine proteinase inhibitor lekti
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=1.9e-05  Score=52.33  Aligned_cols=26  Identities=31%  Similarity=0.712  Sum_probs=21.4

Q ss_pred             cCCCCCcceeeCCCCceecCcccccccc
Q psy11785        261 ECDHSKFNPICGGDGRTYFSACHAGCQN  288 (308)
Q Consensus       261 ~C~~~~~~PvC~~~g~ty~SpC~AGC~~  288 (308)
                      .|+ ..|+||||+||.||-+.|+- |.+
T Consensus        25 ~C~-~~~~PvcG~dG~ty~N~C~~-c~~   50 (68)
T d1h0za_          25 ACT-RENDPIQGPDGKVHGNTCSM-CEV   50 (68)
T ss_dssp             CCC-CCSCCCBCTTSCBCSSHHHH-HHH
T ss_pred             cCC-CCCCccCCCCCCEecCHhHH-HHH
Confidence            376 56999999999999999964 554

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=96.44  E-value=0.0017  Score=57.30  Aligned_cols=68  Identities=12%  Similarity=0.038  Sum_probs=44.6

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhCCCcccccccchhhhhhhhHHHhhhhheehhhccCCccchhHHHHH
Q psy11785        144 RTASSVLHILPIAGLYTFLPKYFETQFRLPSHTANMVSGVGGILVMGIGIILSGVFILKFKPNARFVAAWIAI  216 (308)
Q Consensus       144 ~~l~~~~~~~~~~~~~~~~P~yl~~~~gls~~~agl~~g~~~i~~~~iG~~lgG~l~~r~~~~~~~~~~~~~~  216 (308)
                      ..++....+.....+....| +++ ++|+|.++.|++.+...+ +..++.+++|++.||+++|  +.+..+.+
T Consensus        30 ~~~~~~~~~~~~~~~~~~~p-~~~-~~g~s~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~g~r--~~~~~~~~   97 (447)
T d1pw4a_          30 IFFGYAAYYLVRKNFALAMP-YLV-EQGFSRGDLGFALSGISI-AYGFSKFIMGSVSDRSNPR--VFLPAGLI   97 (447)
T ss_dssp             HHHHHHHHHHHHTSHHHHHH-HTT-SSTTCSSCHHHHHHHHHH-HHHHHHHHHHHHHHHSCHH--HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHH-HhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCch--HHHHHHHH
Confidence            33333333333334455566 455 489999999998876654 5678899999999999865  44444333

>d1hdla_ g.68.1.2 (A:) Serine proteinase inhibitor lekti {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Kazal-type serine protease inhibitors
superfamily: Kazal-type serine protease inhibitors
family: Serine proteinase inhibitor lekti
domain: Serine proteinase inhibitor lekti
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.00016  Score=45.31  Aligned_cols=27  Identities=19%  Similarity=0.389  Sum_probs=22.1

Q ss_pred             ccCCCCCcceeeCCCCceecCcccccccc
Q psy11785        260 CECDHSKFNPICGGDGRTYFSACHAGCQN  288 (308)
Q Consensus       260 C~C~~~~~~PvC~~~g~ty~SpC~AGC~~  288 (308)
                      -.|+ ..++||||.||.||-+-|.= |..
T Consensus        20 l~Ct-r~~~Pv~g~dGkty~NkC~~-C~~   46 (55)
T d1hdla_          20 LFCP-QDKKFFQSLDGIMFINKCAT-CKM   46 (55)
T ss_dssp             BCCC-SCGGGGGSHHHHHHHHHHHH-HHH
T ss_pred             eecC-CCCCCCCCCCCCEeccHhHH-HHH
Confidence            5586 56999999999999999965 544

>d1n1ua_ g.3.3.1 (A:) Kalata B1 {African plant (Oldenlandia affinis) [TaxId: 60225]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Cyclotides
family: Kalata B1
domain: Kalata B1
species: African plant (Oldenlandia affinis) [TaxId: 60225]

Probab=81.35  E-value=0.14  Score=26.20  Aligned_cols=21  Identities=33%  Similarity=0.953  Sum_probs=15.7

Q ss_pred             ccCCCCCCCccCCCCCcceeeCCCCc
Q psy11785        251 EPMCATTHGCECDHSKFNPICGGDGR  276 (308)
Q Consensus       251 ~~~Cn~~~~C~C~~~~~~PvC~~~g~  276 (308)
                      ...||.. +|.|+   | |||-.|++
T Consensus         7 ggtc~tp-gctcs---w-pictrn~l   27 (29)
T d1n1ua_           7 GGTCNTP-GATCS---W-PVCTRNGL   27 (29)
T ss_dssp             TSCCSST-TCEEE---T-TEEEETTE
T ss_pred             CCeecCC-Cceee---c-ceeccccc
Confidence            3568875 79995   4 99988774