Psyllid ID: psy11797

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MSQVTFICSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDIDECVTIPAVESSKLAKMFLRAY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccEEEcccccccccccccccccEEEEccccEEEEcccccEEccccccccccccccccccccccccccccccccccccccccccEEEccccEEEEcccccEEcccccccccccccccccccccccccccccccccccccccEEEccccccEEccccccccccccccEEEEcccccccccccccccccccEEEEcccccccccccccccccccccccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
ccccccEccccHcccccccccccccccccccHHccccccccccEEEcccccEEEEcccccEEcccccEccccccccccccccccccccccHHHccccccccccEEEcccccEEEEcccccEEcccccEEEcccccccccccccccccccccccccccccccEEccccccEEcccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccHHHHcccccccccEEEcccccc
Coil and Loop (DISEMBL)
msqvtficsdvdecrtpantckfscknlidvdecrtpantckfscknligsymctcppgyqqvthsTVAIattdtrtaesggkshecvdvnecelnldscangrcvnlegsyrcecergfklsldgkqclgkgqfVEFRIILSmpkaensvnnnnnqrlgfcyrsltngrcvlptgpalLMEVTRMdccctmgmawgpqcqlcptrgsqeytdlclesgltvdgrdidecvtipavesSKLAKMFLRAY
Flexible Loop (DISEMBL)
msqvtficsdvdecrtpantckfscknlidvdecrtpANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDtrtaesggkshECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLsldgkqclGKGQFVEFRIILSMPkaensvnnnNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDIDECvtipavessklAKMFLRAY
Low Complexity Region (SEG)
MSQVTFICSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDIDECVTIPAVESSKLAKMFLRAY
Disordered region (IsUnstruct)
***VTFICSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDT*********HECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILS***************LGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDIDECVTIPAVE************
Disordered Region (DISOPRED)
MSQVTFICSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDIDECVTIPAVESSKLAKMFLRAY
Disordered Region (DISEMBL)
MSQVTFICSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTD***********ECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDIDECVTIPAVESSKLAKMFLRAY
Disordered Region (DISPRO)
****TFICSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDIDECVTIPAVESSKLAKMFLRAY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQVTFICSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDIDECVTIPAVESSKLAKMFLRAY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	249	2.2.26 [Sep-21-2011]
P35556	2912	Fibrillin-2 OS=Homo sapie	yes	N/A	0.738	0.063	0.334	1e-26
Q61555	2907	Fibrillin-2 OS=Mus muscul	yes	N/A	0.738	0.063	0.330	1e-26
P35555	2871	Fibrillin-1 OS=Homo sapie	no	N/A	0.746	0.064	0.316	4e-24
P98133	2871	Fibrillin-1 OS=Bos taurus	no	N/A	0.746	0.064	0.316	4e-24
Q9TV36	2871	Fibrillin-1 OS=Sus scrofa	no	N/A	0.746	0.064	0.312	3e-23
Q61554	2871	Fibrillin-1 OS=Mus muscul	no	N/A	0.746	0.064	0.308	3e-22
Q75N90	2809	Fibrillin-3 OS=Homo sapie	no	N/A	0.650	0.057	0.301	9e-19
O08999	1813	Latent-transforming growt	no	N/A	0.630	0.086	0.312	2e-14
Q00918	1712	Latent-transforming growt	no	N/A	0.457	0.066	0.342	5e-14
Q9NS15	1303	Latent-transforming growt	no	N/A	0.598	0.114	0.329	9e-14

>sp|P35556|FBN2_HUMAN Fibrillin-2 OS=Homo sapiens GN=FBN2 PE=1 SV=3

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 109/254 (42%), Gaps = 70/254 (27%)

Query: 8    CSDVDECRTPANTCKFSCKNLI---------------------DVDECRTPANTCK---F 43
            C D++EC      C F C N                       D+DEC    + C+    
Sbjct: 2251 CEDINECAQNPLLCAFRCMNTFGSYECTCPIGYALREDQKMCKDLDECAEGLHDCESRGM 2310

Query: 44   SCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANG 103
             CKNLIG++MC CPPG                R  +  G    CVD NEC      C NG
Sbjct: 2311 MCKNLIGTFMCICPPGM--------------ARRPDGEG----CVDENECRTKPGICENG 2352

Query: 104  RCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCY 163
            RCVN+ GSYRCEC  GF+ S  G +CL                         + R G C+
Sbjct: 2353 RCVNIIGSYRCECNEGFQSSSSGTECL-------------------------DNRQGLCF 2387

Query: 164  RSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLES-GLTV 222
              +    C + +    L  VT+ +CCC  G  WG QC+LCP  G+ +Y  +C    G T 
Sbjct: 2388 AEVLQTICQMASSSRNL--VTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGPGYTT 2445

Query: 223  DGRDIDECVTIPAV 236
            DGRDIDEC  +P +
Sbjct: 2446 DGRDIDECKVMPNL 2459

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.
Homo sapiens (taxid: 9606)

>sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=1 SV=2

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 109/254 (42%), Gaps = 70/254 (27%)

Query: 8    CSDVDECRTPANTCKFSCKNLI---------------------DVDECRTPANTCK---F 43
            C D++EC      C F C N                       D+DEC    + C+    
Sbjct: 2244 CEDINECAQNPLLCAFRCMNTFGSYECTCPVGYALREDQKMCKDLDECAEGLHDCESRGM 2303

Query: 44   SCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANG 103
             CKNLIG++MC CPPG                R  +  G    CVD NEC      C NG
Sbjct: 2304 MCKNLIGTFMCICPPGM--------------ARRPDGEG----CVDENECRTKPGICENG 2345

Query: 104  RCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCY 163
            RCVN+ GSYRCEC  GF+ S  G +CL                         + R G C+
Sbjct: 2346 RCVNIIGSYRCECNEGFQSSSSGTECL-------------------------DNRQGLCF 2380

Query: 164  RSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLES-GLTV 222
              +    C + +    L  VT+ +CCC  G  WG QC+LCP  G+ +Y  +C    G   
Sbjct: 2381 AEVLQTMCQMASSSRNL--VTKSECCCDGGRGWGHQCELCPLPGTAQYKKICPHGPGYAT 2438

Query: 223  DGRDIDECVTIPAV 236
            DGRDIDEC  +P++
Sbjct: 2439 DGRDIDECKVMPSL 2452

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3

 Score =  111 bits (278), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 105/256 (41%), Gaps = 70/256 (27%)

Query: 6    FICSDVDECRTPANTCKFSCKNLI---------------------DVDECRTPANTC--- 41
              C D++EC      C F C N                       D DEC    + C   
Sbjct: 2202 MTCEDINECAQNPLLCAFRCVNTYGSYECKCPVGYVLREDRRMCKDEDECEEGKHDCTEK 2261

Query: 42   KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA 101
            +  CKNLIG+YMC C PGYQ              R  +  G    CVD NEC+     C 
Sbjct: 2262 QMECKNLIGTYMCICGPGYQ--------------RRPDGEG----CVDENECQTKPGICE 2303

Query: 102  NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGF 161
            NGRC+N  GSY CEC  GF  S +  +CL                         + R G+
Sbjct: 2304 NGRCLNTRGSYTCECNDGFTASPNQDECL-------------------------DNREGY 2338

Query: 162  CYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLES-GL 220
            C+  +    C +  G +    VT+ +CCC  G  WGP C++CP +G+  +  LC    G 
Sbjct: 2339 CFTEVLQNMCQI--GSSNRNPVTKSECCCDGGRGWGPHCEICPFQGTVAFKKLCPHGRGF 2396

Query: 221  TVDGRDIDECVTIPAV 236
              +G DIDEC  I  V
Sbjct: 2397 MTNGADIDECKVIHDV 2412

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Homo sapiens (taxid: 9606)

>sp|P98133|FBN1_BOVIN Fibrillin-1 OS=Bos taurus GN=FBN1 PE=1 SV=1

 Score =  111 bits (278), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 105/256 (41%), Gaps = 70/256 (27%)

Query: 6    FICSDVDECRTPANTCKFSCKNLIDVDECRTPAN--------TCK--------------- 42
              C D++EC      C F C N     EC+ PA          CK               
Sbjct: 2202 MTCEDINECAQNPLLCAFRCVNTYGSYECKCPAGYVLREDRRMCKDEDECEEGKHDCAEK 2261

Query: 43   -FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA 101
               CKNLIG+Y+C C PGYQ              R  +  G    CVD NEC+     C 
Sbjct: 2262 QMECKNLIGTYLCICGPGYQ--------------RRPDGEG----CVDENECQTKPGICE 2303

Query: 102  NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGF 161
            NGRC+N  GSY CEC  GF  S +  +CL                         + R G+
Sbjct: 2304 NGRCLNTRGSYTCECNDGFTASPNQDECL-------------------------DNREGY 2338

Query: 162  CYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLES-GL 220
            C+  +    C +  G +    VT+ +CCC  G  WGP C++CP +G+  +  LC    G 
Sbjct: 2339 CFTEVLQNMCQI--GSSNRNPVTKSECCCDGGRGWGPHCEICPFQGTVAFKKLCPHGRGF 2396

Query: 221  TVDGRDIDECVTIPAV 236
              +G DIDEC  I  V
Sbjct: 2397 MTNGADIDECKVIHDV 2412

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Bos taurus (taxid: 9913)

>sp|Q9TV36|FBN1_PIG Fibrillin-1 OS=Sus scrofa GN=FBN1 PE=2 SV=1

 Score =  108 bits (270), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 103/256 (40%), Gaps = 70/256 (27%)

Query: 6    FICSDVDECRTPANTCKFSCKNLI---------------------DVDECRTPANTC--- 41
              C D++EC      C F C N                       D DEC    + C   
Sbjct: 2202 MTCEDINECAQNPLLCAFRCVNTYGSYECKCPTGYVLREDRRMCKDEDECEEGKHDCAEK 2261

Query: 42   KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA 101
            +  CKNLIG Y+C C PGYQ              R  +  G    CVD NEC+     C 
Sbjct: 2262 QMECKNLIGMYICICGPGYQ--------------RRPDGEG----CVDENECQTKPGICE 2303

Query: 102  NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGF 161
            NGRC+N  GSY CEC  GF  S    +CL                         + R G+
Sbjct: 2304 NGRCLNTRGSYTCECNDGFTASPTQDECL-------------------------DNREGY 2338

Query: 162  CYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLES-GL 220
            C+  +    C +  G +    VT+ +CCC  G  WGP C++CP +G+  +  LC    G 
Sbjct: 2339 CFTEVLQNMCQI--GSSNRNPVTKSECCCDGGRGWGPHCEICPFQGTVAFKKLCPHGRGF 2396

Query: 221  TVDGRDIDECVTIPAV 236
              +G DIDEC  I  V
Sbjct: 2397 MTNGADIDECKVIHDV 2412

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Sus scrofa (taxid: 9823)

>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1

 Score =  105 bits (262), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 101/256 (39%), Gaps = 70/256 (27%)

Query: 6    FICSDVDECRTPANTCKFSCKNLIDVDECRTPAN--------TCK--------------- 42
              C D++EC      C F C N     EC+ P           CK               
Sbjct: 2202 MTCEDINECAQNPLLCAFRCVNTYGSYECKCPVGYVLREDRRMCKDEDECAEGKHDCTEK 2261

Query: 43   -FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA 101
               CKNLIG+YMC C PGYQ              R  +  G    C+D NEC+     C 
Sbjct: 2262 QMECKNLIGTYMCICGPGYQ--------------RRPDGEG----CIDENECQTKPGICE 2303

Query: 102  NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGF 161
            NGRC+N  GSY CEC  GF  S    +CL                         + R G+
Sbjct: 2304 NGRCLNTLGSYTCECNDGFTASPTQDECL-------------------------DNREGY 2338

Query: 162  CYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLES-GL 220
            C+  +    C +  G +    VT+ +CCC  G  WG  C++CP  G+  Y  LC    G 
Sbjct: 2339 CFSEVFENMCQI--GSSNRNPVTKSECCCVGGRGWGLHCEICPFEGTVAYKKLCPHGRGF 2396

Query: 221  TVDGRDIDECVTIPAV 236
              +G D+DEC  I  V
Sbjct: 2397 MTNGADVDECKVIHDV 2412

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.

Mus musculus (taxid: 10090)

>sp|Q75N90|FBN3_HUMAN Fibrillin-3 OS=Homo sapiens GN=FBN3 PE=2 SV=3

 Score = 94.0 bits (232), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 93/219 (42%), Gaps = 57/219 (26%)

Query: 26   KNLIDVDECRTPANTC-KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKS 84
            KN +D +EC + A TC   +C+NL GS+ C CPPG+Q                     +S
Sbjct: 1925 KNCVDTNECLSLAGTCLPGTCQNLEGSFRCICPPGFQV--------------------QS 1964

Query: 85   HECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSM 144
              C+D++EC    + C  G C N  GS++C C  GF LS +G +C               
Sbjct: 1965 DHCIDIDECSEEPNLCLFGTCTNSPGSFQCLCPPGFVLSDNGHRCF-------------- 2010

Query: 145  PKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM--GMAWGPQCQL 202
                       + R  FC+     G+C +P         T+  CCC+   G  WG  C+L
Sbjct: 2011 -----------DTRQSFCFTRFEAGKCSVPKA----FNTTKTRCCCSKRPGEGWGDPCEL 2055

Query: 203  CPTRGSQEYTDLCLESGLTVDG-----RDIDECVTIPAV 236
            CP  GS  + +LC      V G      D++EC   P V
Sbjct: 2056 CPQEGSAAFQELCPFGHGAVPGPDDSREDVNECAENPGV 2094

Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-containing microfibrils provide long-term force bearing structural support.

Homo sapiens (taxid: 9606)

>sp|O08999|LTBP2_MOUSE Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus GN=Ltbp2 PE=1 SV=2

 Score = 80.1 bits (196), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 82/195 (42%), Gaps = 38/195 (19%)

Query: 23   FSCKNLIDVDECR--TPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAES 80
            F      D DEC    PA      C N++  Y+C C PGY                    
Sbjct: 1470 FGQTMYTDADECVLFGPALCQNGRCSNIVPGYICLCNPGYHY------------------ 1511

Query: 81   GGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRI 140
               S +C D NEC+ +L +C NG CVN EGS+ C C     L L G++C+      E   
Sbjct: 1512 DASSRKCQDHNECQ-DL-ACENGECVNQEGSFHCLCNPPLTLDLSGQRCVNTTSSTE--- 1566

Query: 141  ILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQC 200
                P        +++  +  C++ +TN  C   + P      T  +CCC  G AW  QC
Sbjct: 1567 --DFP--------DHDIHMDICWKKVTNDVC---SQPLRGHHTTYTECCCQDGEAWSQQC 1613

Query: 201  QLCPTRGSQEYTDLC 215
             LCP R S+ Y  LC
Sbjct: 1614 ALCPPRSSEVYAQLC 1628

May play an integral structural role in elastic-fiber architectural organization and/or assembly. May be involved in the assembly, secretion and targeting of TGF- beta to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGF-beta. May have a structural role in the extra cellular matrix (ECM).

Mus musculus (taxid: 10090)

>sp|Q00918|LTBP1_RAT Latent-transforming growth factor beta-binding protein 1 OS=Rattus norvegicus GN=Ltbp1 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 26/140 (18%)

Query: 87  CVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPK 146
           C D+NEC+L    C NG C+N  GSYRC C+ GF        C+     +          
Sbjct: 616 CQDINECQLQ-GVCPNGECLNTMGSYRCSCKMGFGPDPTFSSCVPDPPMI---------- 664

Query: 147 AENSVNNNNNQRLGFCYRSLTNGR-CVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPT 205
                    ++  G CYR ++ GR C+ P    L + +T+  CCC++G AWGPQC+ CP 
Sbjct: 665 ---------SEEKGPCYRLVSPGRQCMHP----LSVHLTKQICCCSVGKAWGPQCEKCPL 711

Query: 206 RGSQEYTDLCLES-GLTVDG 224
            G+  + ++C    G TV G
Sbjct: 712 PGTAAFKEICPGGMGYTVSG 731

May be involved in the assembly, secretion and targeting of TGFB1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGFB1. May have a structural role in the extra cellular matrix (ECM).

Rattus norvegicus (taxid: 10116)

>sp|Q9NS15|LTBP3_HUMAN Latent-transforming growth factor beta-binding protein 3 OS=Homo sapiens GN=LTBP3 PE=1 SV=4

 Score = 77.4 bits (189), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 81/185 (43%), Gaps = 36/185 (19%)

Query: 29   IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECV 88
            +DVDEC   +N     C+N  G Y C C P               +   A+    S E +
Sbjct: 1035 VDVDECLDESNCRNGVCENTRGGYRCACTP-------------PAEYSPAQRQCLSPEEM 1081

Query: 89   DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAE 148
            DV+EC+ +  +C  GRCVNL GSYRCEC   +     G+ C    Q  E           
Sbjct: 1082 DVDECQ-DPAACRPGRCVNLPGSYRCECRPPWVPGPSGRDC----QLPE----------- 1125

Query: 149  NSVNNNNNQRLGFCY-RSLTNGRCVLP-TGPALLMEVTRMDCCCTMGMAWGPQCQLCPTR 206
             S      +R   C+ +   +G C  P  GPAL  +    DCCC  G  WG QC+ CP R
Sbjct: 1126 -SPAERAPERRDVCWSQRGEDGMCAGPLAGPALTFD----DCCCRQGRGWGAQCRPCPPR 1180

Query: 207  GSQEY 211
            G+  +
Sbjct: 1181 GAGSH 1185

May be involved in the assembly, secretion and targeting of TGFB1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGFB1. May have a structural role in the extra cellular matrix (ECM).

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
321472519	2762	hypothetical protein DAPPUDRAFT_315775 [	0.742	0.066	0.442	6e-48
380016550	2868	PREDICTED: fibrillin-2-like [Apis florea	0.807	0.070	0.419	7e-48
383864528	2865	PREDICTED: fibrillin-2-like [Megachile r	0.807	0.070	0.411	1e-47
328787226	2870	PREDICTED: fibrillin-2-like [Apis mellif	0.807	0.070	0.411	7e-47
332018680	2757	Fibrillin-2 [Acromyrmex echinatior]	0.795	0.071	0.412	7e-47
307166306	2876	Fibrillin-2 [Camponotus floridanus]	0.795	0.068	0.405	8e-47
350416792	2865	PREDICTED: fibrillin-2-like [Bombus impa	0.807	0.070	0.404	3e-46
340721645	2865	PREDICTED: fibrillin-2-like [Bombus terr	0.807	0.070	0.404	4e-46
307196014	2862	Fibrillin-2 [Harpegnathos saltator]	0.742	0.064	0.422	4e-46
328715164	3100	PREDICTED: fibrillin-2-like [Acyrthosiph	0.807	0.064	0.408	2e-45

>gi|321472519|gb|EFX83489.1| hypothetical protein DAPPUDRAFT_315775 [Daphnia pulex]

 Score =  196 bits (499), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/251 (44%), Positives = 137/251 (54%), Gaps = 66/251 (26%)

Query: 7    ICSDVDECRTPANTCKFSCKNLI---------------------DVDECRTPANTCKFSC 45
            IC DVDEC+   + C F C N+                      DVDEC TPAN CKF+C
Sbjct: 2095 ICEDVDECQEMGHQCAFRCHNVPGSFRCICPYGYTLAADGRHCQDVDECSTPANNCKFAC 2154

Query: 46   KNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRC 105
            KNLIGS+MC CP GY QV                  G + +C DVNEC  N + C NG C
Sbjct: 2155 KNLIGSFMCICPEGYTQV------------------GMTDDCRDVNECAANGNLCKNGHC 2196

Query: 106  VNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRS 165
            VN +GSY+CEC  GF++S DGK C+                         ++R G+C+R 
Sbjct: 2197 VNTKGSYKCECYEGFEVSSDGKSCI-------------------------DRRTGYCFRQ 2231

Query: 166  LTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGR 225
            L +G C   T    LM+VT+ DCCCTMG AWGP C+ CP +GS+EY +LCLE G +VDG 
Sbjct: 2232 LMSGMCTTHT--DGLMQVTKADCCCTMGAAWGPMCEHCPRKGSEEYEELCLEVGYSVDGH 2289

Query: 226  DIDECVTIPAV 236
            DIDEC TIP +
Sbjct: 2290 DIDECNTIPNL 2300

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016550|ref|XP_003692245.1| PREDICTED: fibrillin-2-like [Apis florea]

 Score =  196 bits (498), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/267 (41%), Positives = 142/267 (53%), Gaps = 66/267 (24%)

Query: 4    VTFICSDVDECRTPANTCKFSCKNL---------------------IDVDECRTPANTCK 42
            V  +C DV+EC    N C F C N                      IDVDEC TPAN CK
Sbjct: 2199 VNQVCEDVNECLELGNQCAFRCHNAPGSFRCICPYGYTLAPDARHCIDVDECATPANNCK 2258

Query: 43   FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCAN 102
            + CKNLIGS+MC CPPGYQQ+                  G + EC DV+EC +N   C N
Sbjct: 2259 YQCKNLIGSFMCICPPGYQQI------------------GMTDECKDVDECAINSGLCRN 2300

Query: 103  GRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFC 162
            G+CVN+EGSY+C C  GF+ S DGK C+                         ++R+G+C
Sbjct: 2301 GQCVNVEGSYQCLCYDGFEQSPDGKSCI-------------------------DRRMGYC 2335

Query: 163  YRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTV 222
            +     GRC   T  + L  VT+ DCCCTMG AWGPQC++CPT+ S  Y +LCL+ G +V
Sbjct: 2336 FLQTIGGRCTART--SDLKTVTKADCCCTMGAAWGPQCEICPTKDSDNYNELCLDKGFSV 2393

Query: 223  DGRDIDECVTIPAVESSKLAKMFLRAY 249
            DG+DIDEC TIP +  + L    L +Y
Sbjct: 2394 DGQDIDECRTIPDLCKNGLCINTLGSY 2420

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864528|ref|XP_003707730.1| PREDICTED: fibrillin-2-like [Megachile rotundata]

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/267 (41%), Positives = 141/267 (52%), Gaps = 66/267 (24%)

Query: 4    VTFICSDVDECRTPANTCKFSCKNL---------------------IDVDECRTPANTCK 42
            V  +C DV+EC    N C F C N                      IDVDEC TPAN CK
Sbjct: 2197 VNQVCEDVNECLEMGNQCAFRCHNAPGSFRCICPYGYTLAPDGRHCIDVDECATPANNCK 2256

Query: 43   FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCAN 102
            + CKNLIGS+MC CPPG+QQ+                  G + EC D++EC +N   C N
Sbjct: 2257 YQCKNLIGSFMCICPPGFQQI------------------GMTDECKDIDECAINSGLCRN 2298

Query: 103  GRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFC 162
            GRC+NLEGSY+C C  GF+ S DGK C+                         ++R+G+C
Sbjct: 2299 GRCINLEGSYQCYCYDGFEQSSDGKSCI-------------------------DRRVGYC 2333

Query: 163  YRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTV 222
            +     GRC   T  + L  VT+ DCCCTMG AWGP C++CPT+ S  Y +LCL+ G +V
Sbjct: 2334 FLQTIGGRCTART--SDLKTVTKADCCCTMGAAWGPHCEICPTKDSDNYNELCLDKGFSV 2391

Query: 223  DGRDIDECVTIPAVESSKLAKMFLRAY 249
            DG+DIDEC TIP +  + L    L +Y
Sbjct: 2392 DGQDIDECRTIPDLCRNGLCINTLGSY 2418

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787226|ref|XP_003250904.1| PREDICTED: fibrillin-2-like [Apis mellifera]

 Score =  193 bits (490), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/267 (41%), Positives = 141/267 (52%), Gaps = 66/267 (24%)

Query: 4    VTFICSDVDECRTPANTCKFSCKNL---------------------IDVDECRTPANTCK 42
            V  +C DV+EC    N C F C N                      IDVDEC TPAN CK
Sbjct: 2200 VNQVCEDVNECLELGNQCAFRCHNAPGSFRCICPYGYTLAPDARHCIDVDECATPANNCK 2259

Query: 43   FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCAN 102
            + CKNLIGS+MC CPPGYQQ+                  G + EC DV+EC +N   C N
Sbjct: 2260 YQCKNLIGSFMCICPPGYQQI------------------GMTDECKDVDECAINSGLCRN 2301

Query: 103  GRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFC 162
            G+CVN+EGSY+C C  GF+ S DGK C+                         ++R+G+C
Sbjct: 2302 GQCVNVEGSYQCLCYDGFEQSPDGKSCI-------------------------DRRMGYC 2336

Query: 163  YRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTV 222
            +     GRC   T  + L  VT+ DCCCTMG AWGP C++CPT+ S  Y +LCL+ G +V
Sbjct: 2337 FLQTIGGRCTART--SDLKTVTKADCCCTMGAAWGPHCEICPTKDSDNYNELCLDKGFSV 2394

Query: 223  DGRDIDECVTIPAVESSKLAKMFLRAY 249
            +G+DIDEC TIP +  + L    L +Y
Sbjct: 2395 NGQDIDECRTIPDLCKNGLCINTLGSY 2421

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018680|gb|EGI59252.1| Fibrillin-2 [Acromyrmex echinatior]

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/264 (41%), Positives = 139/264 (52%), Gaps = 66/264 (25%)

Query: 7    ICSDVDECRTPANTCKFSCKNL---------------------IDVDECRTPANTCKFSC 45
            +C DV+EC    N C F C N                      +DVDEC TPAN C+F C
Sbjct: 2092 VCEDVNECLELGNQCAFRCHNAPGSFRCICPYGYTLAPDGRHCVDVDECATPANDCRFQC 2151

Query: 46   KNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRC 105
            KNLIG++MC CPPGYQ++                  G + EC DVNEC  N   C +GRC
Sbjct: 2152 KNLIGTFMCICPPGYQKI------------------GMADECKDVNECATNSGLCQHGRC 2193

Query: 106  VNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRS 165
            VNLEGSY+C C  GF+ S DGK C+                         ++R+G+C+  
Sbjct: 2194 VNLEGSYQCLCYDGFEQSTDGKSCI-------------------------DRRVGYCFLQ 2228

Query: 166  LTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGR 225
               GRC   T  + L  VT+ DCCCTMG AWGP C++CP+R S  Y +LCL+ G +VDG+
Sbjct: 2229 TIGGRCTART--SELRTVTKADCCCTMGAAWGPHCEICPSRDSDNYNELCLDKGFSVDGQ 2286

Query: 226  DIDECVTIPAVESSKLAKMFLRAY 249
            DIDEC TIP +  + L    L +Y
Sbjct: 2287 DIDECKTIPDLCRNGLCINTLGSY 2310

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307166306|gb|EFN60488.1| Fibrillin-2 [Camponotus floridanus]

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/264 (40%), Positives = 141/264 (53%), Gaps = 66/264 (25%)

Query: 7    ICSDVDECRTPANTCKFSCKNL---------------------IDVDECRTPANTCKFSC 45
            +C DV+EC    N C F C N                      IDVDEC TPAN C+F C
Sbjct: 2212 VCEDVNECLEMGNQCAFRCHNAPGSFRCICPYGYTLAPDGRHCIDVDECATPANDCRFQC 2271

Query: 46   KNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRC 105
            KNLIG+++C CPPGYQ++                  G + EC D+NEC +N   C +GRC
Sbjct: 2272 KNLIGTFICICPPGYQKI------------------GMADECKDINECAINSGLCQHGRC 2313

Query: 106  VNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRS 165
            VNL+GSY+C C  GF+ SLDGK C+                         ++R+G+C+  
Sbjct: 2314 VNLDGSYQCLCHDGFEQSLDGKSCI-------------------------DRRVGYCFLQ 2348

Query: 166  LTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGR 225
               GRC   T  + L  VT+ DCCCTMG AWGP C++CP+R S  Y +LCL+ G +V+G+
Sbjct: 2349 TIGGRCTART--SELRTVTKADCCCTMGAAWGPHCEICPSRDSDNYNELCLDKGFSVNGQ 2406

Query: 226  DIDECVTIPAVESSKLAKMFLRAY 249
            DIDEC TIP +  + L    L +Y
Sbjct: 2407 DIDECKTIPDLCRNGLCINTLGSY 2430

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416792|ref|XP_003491105.1| PREDICTED: fibrillin-2-like [Bombus impatiens]

 Score =  191 bits (485), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/267 (40%), Positives = 141/267 (52%), Gaps = 66/267 (24%)

Query: 4    VTFICSDVDECRTPANTCKFSCKNL---------------------IDVDECRTPANTCK 42
            V  +C DV+EC    N C F C N                      IDVDEC TPAN+CK
Sbjct: 2196 VNQVCEDVNECLEIGNQCAFRCHNAPGSFRCICPYGYTLAPDGRHCIDVDECATPANSCK 2255

Query: 43   FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCAN 102
            + CKNLIGS+MC CPPGYQQ+                  G + EC D++EC +N   C N
Sbjct: 2256 YQCKNLIGSFMCICPPGYQQI------------------GMADECKDIDECAINSGLCRN 2297

Query: 103  GRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFC 162
            GRCVNLE SY+C C  GF+ S DGK C+                         ++R+G+C
Sbjct: 2298 GRCVNLEASYQCLCYDGFEQSPDGKSCI-------------------------DRRIGYC 2332

Query: 163  YRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTV 222
            +     GRC   T  + +  VT+ DCCCTMG AWGP C++CP++ S  Y +LCL+ G ++
Sbjct: 2333 FLQTIAGRCT--TRASDVKTVTKADCCCTMGAAWGPYCEICPSKDSDNYNELCLDKGFSI 2390

Query: 223  DGRDIDECVTIPAVESSKLAKMFLRAY 249
            DG+DIDEC TIP +  + L    L +Y
Sbjct: 2391 DGQDIDECKTIPDLCRNGLCINTLGSY 2417

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721645|ref|XP_003399227.1| PREDICTED: fibrillin-2-like [Bombus terrestris]

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/267 (40%), Positives = 140/267 (52%), Gaps = 66/267 (24%)

Query: 4    VTFICSDVDECRTPANTCKFSCKNL---------------------IDVDECRTPANTCK 42
            V  +C DV+EC    N C F C N                      IDVDEC TPAN CK
Sbjct: 2196 VNQVCEDVNECLEIGNQCAFRCHNAPGSFRCICPYGYTLAPDGRHCIDVDECATPANNCK 2255

Query: 43   FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCAN 102
            + CKNLIGS+MC CPPGYQQ+                  G + EC D++EC +N   C N
Sbjct: 2256 YQCKNLIGSFMCICPPGYQQI------------------GMADECKDIDECAINSGLCRN 2297

Query: 103  GRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFC 162
            GRCVNLE SY+C C  GF+ S DGK C+                         ++R+G+C
Sbjct: 2298 GRCVNLEASYQCLCYDGFEQSPDGKSCI-------------------------DRRIGYC 2332

Query: 163  YRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTV 222
            +     GRC   T  + +  VT+ DCCCTMG AWGP C++CP++ S  Y +LCL+ G ++
Sbjct: 2333 FLQTIAGRCT--TRASDVKTVTKADCCCTMGAAWGPYCEICPSKDSDNYNELCLDKGFSI 2390

Query: 223  DGRDIDECVTIPAVESSKLAKMFLRAY 249
            DG+DIDEC TIP +  + L    L +Y
Sbjct: 2391 DGQDIDECKTIPDLCRNGLCINTLGSY 2417

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307196014|gb|EFN77739.1| Fibrillin-2 [Harpegnathos saltator]

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/251 (42%), Positives = 133/251 (52%), Gaps = 66/251 (26%)

Query: 7    ICSDVDECRTPANTCKFSCKNL---------------------IDVDECRTPANTCKFSC 45
            +C DV+EC    N C F C N                      IDVDEC TPAN C+F C
Sbjct: 2199 VCEDVNECLELGNQCAFRCHNAPGSFRCICPYGYTLAPDGRHCIDVDECVTPANDCRFQC 2258

Query: 46   KNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRC 105
            KNLIG++MC CPPGYQ++                  G   EC D+NEC +N   C +GRC
Sbjct: 2259 KNLIGTFMCICPPGYQKI------------------GTVDECKDINECAINSGLCQHGRC 2300

Query: 106  VNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRS 165
            VN EGSY C C  GF+ SLDGK C+                         ++R+G+C+  
Sbjct: 2301 VNSEGSYHCLCYDGFEQSLDGKSCI-------------------------DRRVGYCFLQ 2335

Query: 166  LTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGR 225
               GRC   T  + L  VT+ DCCCTMG AWGP C++CP+R S  Y +LCL+ G +VDG+
Sbjct: 2336 TIGGRCTART--SELRTVTKADCCCTMGAAWGPHCEICPSRDSDNYNELCLDKGFSVDGQ 2393

Query: 226  DIDECVTIPAV 236
            DIDEC TIP +
Sbjct: 2394 DIDECKTIPDL 2404

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328715164|ref|XP_001945971.2| PREDICTED: fibrillin-2-like [Acyrthosiphon pisum]

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/272 (40%), Positives = 137/272 (50%), Gaps = 71/272 (26%)

Query: 5    TFICSDVDECRTPANTCKFSCKNLI---------------------DVDECRTPANTCKF 43
            T +C DV+EC   +N C F C N+                      DVDEC TPAN CKF
Sbjct: 2360 TQVCEDVNECMEMSNQCAFRCHNVPGSFRCICPYGYALAPDGRHCQDVDECLTPANNCKF 2419

Query: 44   SCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANG 103
            +CKNLIGS+ C CP GY QV                    S EC D+NEC  N + C NG
Sbjct: 2420 ACKNLIGSFACICPEGYAQV-------------------GSDECRDINECAENANVCQNG 2460

Query: 104  RCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCY 163
             CVN  GSY+C+C  GFK S DGKQC+                         + R+GFCY
Sbjct: 2461 YCVNQPGSYKCDCYDGFKTSYDGKQCI-------------------------DSRVGFCY 2495

Query: 164  RSLTNGRCVLP------TGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLE 217
            R L N RC+        TG      VT+ DCCC+M  AWGPQCQ CP+  S  +  LCLE
Sbjct: 2496 RHLLNNRCINHVGGGNVTGAVAYRSVTKADCCCSMAAAWGPQCQPCPSPSSDSFRQLCLE 2555

Query: 218  SGLTVDGRDIDECVTIPAVESSKLAKMFLRAY 249
            SG T+DG+DI+EC T+P + ++      L +Y
Sbjct: 2556 SGYTIDGQDINECETLPDLCTNGRCINTLGSY 2587

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	249
UNIPROTKB|E1C5P6	2869	FBN3 "Uncharacterized protein"	0.742	0.064	0.315	1.1e-23
UNIPROTKB|E2RS46	2921	FBN2 "Uncharacterized protein"	0.867	0.073	0.302	2e-20
UNIPROTKB|P35556	2912	FBN2 "Fibrillin-2" [Homo sapie	0.867	0.074	0.306	2e-20
UNIPROTKB|G3V511	1769	LTBP2 "Latent-transforming gro	0.542	0.076	0.343	2e-22
UNIPROTKB|Q14767	1821	LTBP2 "Latent-transforming gro	0.542	0.074	0.343	2.2e-22
UNIPROTKB|F1M5Q4	859	Fbn2 "Protein Fbn2" [Rattus no	0.767	0.222	0.301	2.6e-22
UNIPROTKB|G3V9M6	2872	Fbn1 "Fibrillin 1, isoform CRA	0.746	0.064	0.297	3.3e-22
RGD|620908	2872	Fbn1 "fibrillin 1" [Rattus nor	0.746	0.064	0.297	3.3e-22
UNIPROTKB|E1C3A6	2914	FBN2 "Uncharacterized protein"	0.867	0.074	0.295	9.8e-21
UNIPROTKB|F1MTZ4	3672	Bt.110891 "Uncharacterized pro	0.867	0.058	0.298	4.3e-20

UNIPROTKB|E1C5P6 FBN3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 265 (98.3 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
 Identities = 71/225 (31%), Positives = 103/225 (45%)

Query:    30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVD 89
             D++EC +    C F C N  GSY CTCP GY        A+   D R         EC +
Sbjct:  2211 DINECASNPLLCAFRCINTFGSYECTCPSGY--------ALRD-DRRMCRD---LDECAE 2258

Query:    90 -VNECELNLDSCANGR-CVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKA 147
              +++CE      + G  C NL G++ C C  G +   DG+ C  + +      I    + 
Sbjct:  2259 GLHDCE------SRGMLCKNLIGTFMCICPPGMQRRPDGEGCTDENECRTKPGICPNGRC 2312

Query:   148 ENSVNNNN---NQ--------------RLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCC 190
              N+V +     N+              R GFC+  +    C + +    L  VT+ +CCC
Sbjct:  2313 INTVGSYRCDCNEGFEVSPSGTECIDTRQGFCFTEVLQTMCQMSSTNRNL--VTKSECCC 2370

Query:   191 TMGMAWGPQCQLCPTRGSQEYTDLCLES-GLTVDGRDIDECVTIP 234
               G +WGPQC+LCP  G+ +Y  +C    G + DGRDIDEC  +P
Sbjct:  2371 NSGRSWGPQCELCPLLGTAQYKKMCPHGPGYSTDGRDIDECKVLP 2415

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

UNIPROTKB|E2RS46 FBN2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 259 (96.2 bits), Expect = 2.0e-20, P = 2.0e-20
 Identities = 85/281 (30%), Positives = 122/281 (43%)

Query:     2 SQVTFICSDVDEC-RTPAN--TCK-----FSC-----------KNLIDVDECRTP-ANTC 41
             SQ   +C DVDEC R P    TCK     ++C            + +D+DEC +     C
Sbjct:  1935 SQDQTMCMDVDECERHPCGNGTCKNTVGSYNCLCYPGFELTHNNDCLDIDECSSFFGQVC 1994

Query:    42 KFS-CKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSC 100
             +   C N IGS+ C C  GY+          T D       GK+  C+D NEC     SC
Sbjct:  1995 RNGRCFNEIGSFKCLCNEGYE---------LTPD-------GKN--CIDTNECVALPGSC 2036

Query:   101 ANGRCVNLEGSYRCECERGFKLS----LDGKQCLGKGQFVEFRIILSMPKAENSV----- 151
             + G C NLEGS+RC C  G+++     +D  +C        F    + P     +     
Sbjct:  2037 SPGTCQNLEGSFRCICPPGYEVKSENCIDINECDEDPNICLFGSCTNTPGGFQCICPPGF 2096

Query:   152 --NNNNNQ----RLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM--GMAWGPQCQLC 203
               ++N  +    R  FC+ +  NG+C +P         T+  CCC+   G  WG  C+LC
Sbjct:  2097 VLSDNGRRCFDTRQSFCFTNFENGKCSVPKA----FNTTKAKCCCSKMPGEGWGDPCELC 2152

Query:   204 PTRGSQEYTDLCLESGLTV----DGR-DIDECVTIPAVESS 239
             P      + DLC     TV    D R D++EC+  P + S+
Sbjct:  2153 PKDDEVAFQDLCPYGHGTVPSLHDTREDVNECLESPGICSN 2193

GO:0060346 "bone trabecula formation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

UNIPROTKB|P35556 FBN2 "Fibrillin-2" [Homo sapiens (taxid:9606)]

 Score = 259 (96.2 bits), Expect = 2.0e-20, P = 2.0e-20
 Identities = 86/281 (30%), Positives = 122/281 (43%)

Query:     2 SQVTFICSDVDEC-RTPAN--TCK-----FSC-----------KNLIDVDECRTP-ANTC 41
             SQ   +C DVDEC R P    TCK     ++C            + +D+DEC +     C
Sbjct:  1926 SQDQTMCMDVDECERHPCGNGTCKNTVGSYNCLCYPGFELTHNNDCLDIDECSSFFGQVC 1985

Query:    42 KFS-CKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSC 100
             +   C N IGS+ C C  GY+          T D       GK+  C+D NEC     SC
Sbjct:  1986 RNGRCFNEIGSFKCLCNEGYE---------LTPD-------GKN--CIDTNECVALPGSC 2027

Query:   101 ANGRCVNLEGSYRCECERGFKLS----LDGKQCLGKGQFVEFRIILSMPKA------ENS 150
             + G C NLEGS+RC C  G+++     +D  +C        F    + P           
Sbjct:  2028 SPGTCQNLEGSFRCICPPGYEVKSENCIDINECDEDPNICLFGSCTNTPGGFQCLCPPGF 2087

Query:   151 VNNNNNQRL-----GFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM--GMAWGPQCQLC 203
             V ++N +R       FC+ +  NG+C +P         T+  CCC+   G  WG  C+LC
Sbjct:  2088 VLSDNGRRCFDTRQSFCFTNFENGKCSVPKA----FNTTKAKCCCSKMPGEGWGDPCELC 2143

Query:   204 PTRGSQEYTDLCLESGLTV----DGR-DIDECVTIPAVESS 239
             P      + DLC     TV    D R D++EC+  P + S+
Sbjct:  2144 PKDDEVAFQDLCPYGHGTVPSLHDTREDVNECLESPGICSN 2184

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=TAS

GO:0009653 "anatomical structure morphogenesis" evidence=TAS

GO:0030501 "positive regulation of bone mineralization" evidence=ISS

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=ISS

GO:0045669 "positive regulation of osteoblast differentiation" evidence=ISS

GO:0060346 "bone trabecula formation" evidence=ISS

GO:0001527 "microfibril" evidence=TAS

UNIPROTKB|G3V511 LTBP2 "Latent-transforming growth factor beta-binding protein 2" [Homo sapiens (taxid:9606)]

 Score = 199 (75.1 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
 Identities = 55/160 (34%), Positives = 76/160 (47%)

Query:    86 ECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQ--CLGKGQFVEFRIILS 143
             +CVDVNECEL L  C    C N+EGS+ C C    +   D ++  C  +G   +     S
Sbjct:  1342 DCVDVNECELMLAVCGAALCENVEGSFLCLCASDLE-EYDAQEGHCRPRGAGGQ-----S 1395

Query:   144 MPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLC 203
             M +A    +     R+  CY S   G    P    L    T+ +CCCT G +WG  C LC
Sbjct:  1396 MSEAPTGDHAPAPTRMD-CY-SGQKGHA--PCSSVLGRNTTQAECCCTQGASWGDACDLC 1451

Query:   204 PTRGSQEYTDLCLESG---LTVDGR---------DIDECV 231
             P+  S E++++C  SG   + V+G          D DECV
Sbjct:  1452 PSEDSAEFSEIC-PSGKGYIPVEGAWTFGQTMYTDADECV 1490

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q14767 LTBP2 "Latent-transforming growth factor beta-binding protein 2" [Homo sapiens (taxid:9606)]

 Score = 199 (75.1 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
 Identities = 55/160 (34%), Positives = 76/160 (47%)

Query:    86 ECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQ--CLGKGQFVEFRIILS 143
             +CVDVNECEL L  C    C N+EGS+ C C    +   D ++  C  +G   +     S
Sbjct:  1342 DCVDVNECELMLAVCGAALCENVEGSFLCLCASDLE-EYDAQEGHCRPRGAGGQ-----S 1395

Query:   144 MPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLC 203
             M +A    +     R+  CY S   G    P    L    T+ +CCCT G +WG  C LC
Sbjct:  1396 MSEAPTGDHAPAPTRMD-CY-SGQKGHA--PCSSVLGRNTTQAECCCTQGASWGDACDLC 1451

Query:   204 PTRGSQEYTDLCLESG---LTVDGR---------DIDECV 231
             P+  S E++++C  SG   + V+G          D DECV
Sbjct:  1452 PSEDSAEFSEIC-PSGKGYIPVEGAWTFGQTMYTDADECV 1490

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0019838 "growth factor binding" evidence=IEA

GO:0070062 "extracellular vesicular exosome" evidence=IDA

GO:0005578 "proteinaceous extracellular matrix" evidence=TAS

GO:0006605 "protein targeting" evidence=TAS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=TAS

GO:0009306 "protein secretion" evidence=TAS

GO:0005615 "extracellular space" evidence=IDA

GO:0031012 "extracellular matrix" evidence=IDA

UNIPROTKB|F1M5Q4 Fbn2 "Protein Fbn2" [Rattus norvegicus (taxid:10116)]

 Score = 247 (92.0 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
 Identities = 69/229 (30%), Positives = 101/229 (44%)

Query:    27 NLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHE 86
             N  D++EC      C F C N  GSY CTCP GY        A+   D +  +      E
Sbjct:   195 NCEDINECAQNPLLCAFRCMNTFGSYECTCPVGY--------ALRE-DQKMCKD---LDE 242

Query:    87 CVD-VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQ------FVE-- 137
             C + +++CE          C NL G++ C C  G     DG+ C+ + +        E  
Sbjct:   243 CAEGLHDCESR-----GMMCKNLIGTFMCICPPGMARRPDGEGCVDENECRTKPGICENG 297

Query:   138 --FRIILSMP-------KAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDC 188
                 II S         ++ +S     + R G C+  +    C + +    L  VT+ +C
Sbjct:   298 RCVNIIGSYRCECNEGFQSSSSGTECLDNRQGLCFAEVLQTMCQMASSSRNL--VTKSEC 355

Query:   189 CCTMGMAWGPQCQLCPTRGSQEYTDLCLES-GLTVDGRDIDECVTIPAV 236
             CC  G  WG QC+LCP  G+ +Y  +C    G   DGRDIDEC  +P++
Sbjct:   356 CCDGGRGWGHQCELCPLPGTAQYKKICPHGPGYATDGRDIDECKVMPSL 404

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0060346 "bone trabecula formation" evidence=IEA

UNIPROTKB|G3V9M6 Fbn1 "Fibrillin 1, isoform CRA_a" [Rattus norvegicus (taxid:10116)]

 Score = 246 (91.7 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
 Identities = 66/222 (29%), Positives = 97/222 (43%)

Query:    30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVD 89
             D++EC      C F C N  GSY C CP GY  V      +   +   AE  GK H+C +
Sbjct:  2207 DINECAQNPLLCAFRCVNTYGSYECKCPVGY--VLREDRRMCKDEDECAE--GK-HDCTE 2261

Query:    90 VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAEN 149
               + E          C NL G+Y C C  G++   DG+ C+ + +      I    +  N
Sbjct:  2262 -KQME----------CKNLIGTYMCICGPGYQRRPDGEGCIDENECQTKPGICENGRCLN 2310

Query:   150 SVNN-----NN------------NQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM 192
             ++ +     N+            + R G+C+  +    C +  G +    VT+ +CCC  
Sbjct:  2311 TLGSYTCECNDGFTASPTQDECLDNREGYCFSEVLQNMCQI--GSSNRNPVTKSECCCDG 2368

Query:   193 GMAWGPQCQLCPTRGSQEYTDLCLES-GLTVDGRDIDECVTI 233
             G  WGP C++CP  G+  Y  LC    G   +G DIDEC  I
Sbjct:  2369 GRGWGPHCEICPFEGTVAYKKLCPHGRGFMTNGADIDECKVI 2410

GO:0001501 "skeletal system development" evidence=IEA

GO:0001527 "microfibril" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005604 "basement membrane" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0007507 "heart development" evidence=IEA

RGD|620908 Fbn1 "fibrillin 1" [Rattus norvegicus (taxid:10116)]

 Score = 246 (91.7 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
 Identities = 66/222 (29%), Positives = 97/222 (43%)

Query:    30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVD 89
             D++EC      C F C N  GSY C CP GY  V      +   +   AE  GK H+C +
Sbjct:  2207 DINECAQNPLLCAFRCVNTYGSYECKCPVGY--VLREDRRMCKDEDECAE--GK-HDCTE 2261

Query:    90 VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAEN 149
               + E          C NL G+Y C C  G++   DG+ C+ + +      I    +  N
Sbjct:  2262 -KQME----------CKNLIGTYMCICGPGYQRRPDGEGCIDENECQTKPGICENGRCLN 2310

Query:   150 SVNN-----NN------------NQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM 192
             ++ +     N+            + R G+C+  +    C +  G +    VT+ +CCC  
Sbjct:  2311 TLGSYTCECNDGFTASPTQDECLDNREGYCFSEVLQNMCQI--GSSNRNPVTKSECCCDG 2368

Query:   193 GMAWGPQCQLCPTRGSQEYTDLCLES-GLTVDGRDIDECVTI 233
             G  WGP C++CP  G+  Y  LC    G   +G DIDEC  I
Sbjct:  2369 GRGWGPHCEICPFEGTVAYKKLCPHGRGFMTNGADIDECKVI 2410

GO:0001501 "skeletal system development" evidence=ISO

GO:0001527 "microfibril" evidence=ISO

GO:0001822 "kidney development" evidence=IMP

GO:0005201 "extracellular matrix structural constituent" evidence=ISO;IMP

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005578 "proteinaceous extracellular matrix" evidence=ISO

GO:0005604 "basement membrane" evidence=ISO

GO:0005615 "extracellular space" evidence=ISO

GO:0007507 "heart development" evidence=ISO

GO:0031012 "extracellular matrix" evidence=ISO;IDA

GO:0035582 "sequestering of BMP in extracellular matrix" evidence=ISO

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=ISO

UNIPROTKB|E1C3A6 FBN2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 262 (97.3 bits), Expect = 9.8e-21, P = 9.8e-21
 Identities = 83/281 (29%), Positives = 121/281 (43%)

Query:     2 SQVTFICSDVDEC-RTPAN--TCK-----FSC-----------KNLIDVDECRTP-ANTC 41
             SQ   +C DVDEC R P    TCK     ++C            + +D+DEC +     C
Sbjct:  1925 SQDQTMCMDVDECERHPCGNGTCKNTVGSYNCLCYPGFELTHNNDCMDIDECSSFFGQVC 1984

Query:    42 KFS-CKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSC 100
             +   C N IGS+ C C  GY+          T D       GK+  C+D NEC     SC
Sbjct:  1985 RNGRCFNEIGSFKCLCNEGYE---------LTLD-------GKN--CIDTNECVALPGSC 2026

Query:   101 ANGRCVNLEGSYRCECERGFKLS----LDGKQCLGKGQFVEFRIILSMPKAENSV----- 151
             + G C NLEGS+RC C  G+++     +D  +C        F    + P     +     
Sbjct:  2027 SPGTCQNLEGSFRCICPPGYEVKSESCIDINECNEDPNICLFGSCTNTPGGFQCICPTGF 2086

Query:   152 --NNNNNQ----RLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM--GMAWGPQCQLC 203
               ++N  +    R  FC+ +  NG+C +P         T+  CCC+   G  WG  C+LC
Sbjct:  2087 VLSDNGRRCFDTRQSFCFTNFENGKCSVPKA----FNTTKAKCCCSKMPGEGWGDPCELC 2142

Query:   204 PTRGSQEYTDLCLESGLTVDG-----RDIDECVTIPAVESS 239
             P      + DLC     T+ G      D++EC+  P + S+
Sbjct:  2143 PKEEEVAFQDLCPYGHGTIPGIDDTREDVNECLESPGICSN 2183

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0060346 "bone trabecula formation" evidence=IEA

UNIPROTKB|F1MTZ4 Bt.110891 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 257 (95.5 bits), Expect = 4.3e-20, P = 4.3e-20
 Identities = 84/281 (29%), Positives = 122/281 (43%)

Query:     2 SQVTFICSDVDEC-RTPAN--TCK-----FSC-----------KNLIDVDECRTP-ANTC 41
             SQ   +C DVDEC R P    TCK     ++C            + +D+DEC +     C
Sbjct:  2680 SQDQTMCMDVDECERHPCGNGTCKNTVGSYNCLCYPGFALTHNNDCMDIDECSSFFGQVC 2739

Query:    42 KFS-CKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSC 100
             +   C N +GS+ C C  GY+          T D       GK+  C+D NEC     SC
Sbjct:  2740 RNGRCFNEVGSFKCLCNEGYE---------LTPD-------GKN--CIDTNECVALPGSC 2781

Query:   101 ANGRCVNLEGSYRCECERGFKLS----LDGKQCLGKGQFVEFRIILSMPKAENSV----- 151
             + G C NLEGS+RC C  G+++     +D  +C        F    + P     +     
Sbjct:  2782 SPGTCQNLEGSFRCICPPGYEVKSENCIDINECDEDPNICLFGSCTNTPGGFQCICPPGF 2841

Query:   152 --NNNNNQ----RLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM--GMAWGPQCQLC 203
               ++N  +    R  FC+ +  NG+C +P         T+  CCC+   G  WG  C+LC
Sbjct:  2842 VLSDNGRRCFDTRQSFCFTNFENGKCSVPKA----FNTTKAKCCCSKMPGEGWGDPCELC 2897

Query:   204 PTRGSQEYTDLCLESGLTV----DGR-DIDECVTIPAVESS 239
             P      + DLC     TV    D R D++EC+  P + S+
Sbjct:  2898 PKDDEVAFQDLCPYGHGTVPSLHDTREDVNECLESPGICSN 2938

GO:0060346 "bone trabecula formation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0035583 "sequestering of TGFbeta in extracellular matrix" evidence=IEA

GO:0030501 "positive regulation of bone mineralization" evidence=IEA

GO:0030326 "embryonic limb morphogenesis" evidence=IEA

GO:0005578 "proteinaceous extracellular matrix" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005201 "extracellular matrix structural constituent" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	249
pfam00683	42	pfam00683, TB, TB domain	9e-07
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	9e-06
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	1e-05
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	4e-05
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	7e-05
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	2e-04
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	4e-04

>gnl|CDD|201391 pfam00683, TB, TB domain

 Score = 44.2 bits (105), Expect = 9e-07
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 169 GRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDL 214
           GRC  P        VT+ +CCC++G AWG  C+ CP +G+ E+  L
Sbjct: 1   GRCSNPLPGN----VTKSECCCSLGRAWGTPCEPCPVQGTAEFRQL 42

This domain is also known as the 8 cysteine domain. This family includes the hybrid domains. This cysteine rich repeat is found in TGF binding protein and fibrillin. Length = 42

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 41.6 bits (98), Expect = 9e-06
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 89  DVNECELNLDSC-ANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           DV+EC     +C AN  CVN  GS+ C C  G++ + DG  C
Sbjct: 1   DVDECADGTHNCPANTVCVNTIGSFECVCPDGYENNEDGTNC 42

Length = 42

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 5/42 (11%)

Query: 89  DVNECELNLDSCANG-RCVNLEGSYRCECERGFKLSLDGKQC 129
           D++EC    + C NG  CVN  GSYRCEC  G+    DG+ C
Sbjct: 1   DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT---DGRNC 38

Length = 39

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 30 DVDECRTPANTC--KFSCKNLIGSYMCTCPPGYQ 61
          DVDEC    + C     C N IGS+ C CP GY+
Sbjct: 1  DVDECADGTHNCPANTVCVNTIGSFECVCPDGYE 34

Length = 42

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 38.8 bits (91), Expect = 7e-05
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKL 122
           D++EC         G CVN  GSYRC C  G+  
Sbjct: 1   DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYTG 34

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)

Query: 30 DVDECRTPANTCK--FSCKNLIGSYMCTCPPGYQ 61
          D+DEC +  N C+   +C N +GSY C CPPGY 
Sbjct: 1  DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT 33

Length = 39

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)

Query: 30 DVDECRTPANTCKFS--CKNLIGSYMCTCPPGYQ 61
          D+DEC +  N C+    C N +GSY C+CPPGY 
Sbjct: 1  DIDECASG-NPCQNGGTCVNTVGSYRCSCPPGYT 33

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	249
KOG1214|consensus	1289		99.31
KOG1214|consensus	1289		99.28
KOG1219|consensus	4289		99.08
KOG1219|consensus	4289		98.93
KOG4289|consensus	2531		98.87
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.68
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.57
KOG1217|consensus	487		98.48
KOG1217|consensus	487		98.35
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	98.23
KOG4260|consensus	350		98.14
PF12662	24	cEGF: Complement Clr-like EGF-like	98.06
KOG4289|consensus	2531		97.96
PF12662	24	cEGF: Complement Clr-like EGF-like	97.95
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	97.85
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.8
KOG4260|consensus	350		97.69
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.53
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.51
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.45
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.41
KOG1225|consensus	525		97.33
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.25
PF00683	42	TB: TB domain; InterPro: IPR002212 Transforming gr	96.87
KOG1225|consensus	525		96.8
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.79
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	96.63
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.35
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	96.32
smart00181	35	EGF Epidermal growth factor-like domain.	96.32
smart00181	35	EGF Epidermal growth factor-like domain.	96.21
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	96.19
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.07
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	95.84
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	94.29
KOG0994|consensus	1758		92.8
KOG0994|consensus	1758		92.56
KOG1226|consensus	783		90.28
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	89.9
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	88.26
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	81.0

>KOG1214|consensus

Probab=99.31  E-value=6.5e-12  Score=115.15  Aligned_cols=158  Identities=27%  Similarity=0.556  Sum_probs=114.8

Q ss_pred             CCccCCCCCCCC--CCceecCC-CeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeee
Q psy11797         31 VDECRTPANTCK--FSCKNLIG-SYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCV  106 (249)
Q Consensus        31 id~C~~~~~~c~--~~C~n~~g-sy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~  106 (249)
                      ++.|..+.+.|.  +.|....+ .|+|.|..||.|++                    ..|.|+++|+.....|. +.+|+
T Consensus       692 ~npCy~gsh~cdt~a~C~pg~~~~~tcecs~g~~gdg--------------------r~c~d~~eca~~~~~CGp~s~Ci  751 (1289)
T KOG1214|consen  692 VNPCYDGSHMCDTTARCHPGTGVDYTCECSSGYQGDG--------------------RNCVDENECATGFHRCGPNSVCI  751 (1289)
T ss_pred             cccceecCcccCCCccccCCCCcceEEEEeeccCCCC--------------------CCCCChhhhccCCCCCCCCceee
Confidence            567777777776  77876654 59999999999876                    67899999998788899 88999


Q ss_pred             eCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccC--CCCCcc--cccccc-CCCCcccCCCCCCccC
Q psy11797        107 NLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNN--NNNQRL--GFCYRS-LTNGRCVLPTGPALLM  181 (249)
Q Consensus       107 ~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~C~~~-~~~~~C~c~~g~~~~~  181 (249)
                      +.+++|+|.|..||...+++.+|..+..-+.          .+.|..  ..|.-.  ..|... .+.|.|.|.+||.++.
T Consensus       752 n~pg~~rceC~~gy~F~dd~~tCV~i~~pap----------~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG  821 (1289)
T KOG1214|consen  752 NLPGSYRCECRSGYEFADDRHTCVLITPPAP----------ANPCEDGSHTCAIAGQARCVHHGGSTYSCACLPGFSGDG  821 (1289)
T ss_pred             cCCCceeEEEeecceeccCCcceEEecCCCC----------CCccccCccccCcCCceEEEecCCceEEEeecCCccCCc
Confidence            9999999999999999999999987432111          111211  223333  344444 3459999999998875


Q ss_pred             --CCCcceeecCCCCccCCCCccCCCCCCchhhccCCCCCccCCC
Q psy11797        182 --EVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDG  224 (249)
Q Consensus       182 --~~~~~~C~C~~g~~~g~~C~~C~~~~~~~~~c~Cp~~G~~~~~  224 (249)
                        +.+.++|.=+..+- .++|    ....++|.|.| .+||.||+
T Consensus       822 ~~c~dvDeC~psrChp-~A~C----yntpgsfsC~C-~pGy~GDG  860 (1289)
T KOG1214|consen  822 HQCTDVDECSPSRCHP-AATC----YNTPGSFSCRC-QPGYYGDG  860 (1289)
T ss_pred             cccccccccCccccCC-CceE----ecCCCcceeec-ccCccCCC
Confidence              45667775222222 4455    45557799999 89999988

>KOG1214|consensus

Probab=99.28  E-value=4.5e-11  Score=109.79  Aligned_cols=107  Identities=34%  Similarity=0.768  Sum_probs=88.0

Q ss_pred             CCCCCCCCccCcccCCCCCCCC--cceeeC---------------------------CCCCccCCCCCCCC----CCcee
Q psy11797          1 MSQVTFICSDVDECRTPANTCK--FSCKNL---------------------------IDVDECRTPANTCK----FSCKN   47 (249)
Q Consensus         1 ~~~~g~~C~di~eC~~~~~~c~--~~C~~~---------------------------~did~C~~~~~~c~----~~C~n   47 (249)
                      +.+++++|.|++||+..+..|+  .+|++.                           ..++.|..+.+.|.    +.|+.
T Consensus       724 ~~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~  803 (1289)
T KOG1214|consen  724 YQGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVH  803 (1289)
T ss_pred             cCCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEe
Confidence            3578999999999998877665  588887                           23688888877775    45665


Q ss_pred             cC-CCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCC
Q psy11797         48 LI-GSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLD  125 (249)
Q Consensus        48 ~~-gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~  125 (249)
                      .. ++|.|.|.+||.|++                    +.|.++|+|+  ++.|. ++.|.+++++|.|.|.+||.  .|
T Consensus       804 hGgs~y~C~CLPGfsGDG--------------------~~c~dvDeC~--psrChp~A~CyntpgsfsC~C~pGy~--GD  859 (1289)
T KOG1214|consen  804 HGGSTYSCACLPGFSGDG--------------------HQCTDVDECS--PSRCHPAATCYNTPGSFSCRCQPGYY--GD  859 (1289)
T ss_pred             cCCceEEEeecCCccCCc--------------------cccccccccC--ccccCCCceEecCCCcceeecccCcc--CC
Confidence            54 459999999999976                    6688999999  58898 77999999999999999998  56


Q ss_pred             CCCccc
Q psy11797        126 GKQCLG  131 (249)
Q Consensus       126 g~~C~~  131 (249)
                      |..|.+
T Consensus       860 Gf~CVP  865 (1289)
T KOG1214|consen  860 GFQCVP  865 (1289)
T ss_pred             CceecC
Confidence            778876

>KOG1219|consensus

Probab=99.08  E-value=1.6e-10  Score=114.60  Aligned_cols=108  Identities=23%  Similarity=0.557  Sum_probs=94.6

Q ss_pred             CccCCCCCCCCCCceecC-CCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCC
Q psy11797         32 DECRTPANTCKFSCKNLI-GSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLE  109 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~~-gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~  109 (249)
                      +.|..+|++.+++|...+ |+|.|.|++.|.|..|+                     .++..|..  +||. .|.|+...
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CE---------------------i~~epC~s--nPC~~GgtCip~~ 3921 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCE---------------------IDLEPCAS--NPCLTGGTCIPFY 3921 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCcccc---------------------cccccccC--CCCCCCCEEEecC
Confidence            788888888889998776 67999999999998887                     68899995  8999 55999999


Q ss_pred             CcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCcc
Q psy11797        110 GSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       110 g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~  180 (249)
                      ++|.|.|+.||+    |++|+..              +.+.|..++|..++.|.+..++|.|.|..|+.+.
T Consensus      3922 n~f~CnC~~gyT----G~~Ce~~--------------Gi~eCs~n~C~~gg~C~n~~gsf~CncT~g~~gr 3974 (4289)
T KOG1219|consen 3922 NGFLCNCPNGYT----GKRCEAR--------------GISECSKNVCGTGGQCINIPGSFHCNCTPGILGR 3974 (4289)
T ss_pred             CCeeEeCCCCcc----Cceeecc--------------cccccccccccCCceeeccCCceEeccChhHhcc
Confidence            999999999999    9999872              2455778889999999999999999999998765

>KOG1219|consensus

Probab=98.93  E-value=1.2e-09  Score=108.60  Aligned_cols=94  Identities=27%  Similarity=0.753  Sum_probs=83.3

Q ss_pred             cccCCCCCCCCcceeeC-------------------CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccc
Q psy11797         12 DECRTPANTCKFSCKNL-------------------IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIAT   72 (249)
Q Consensus        12 ~eC~~~~~~c~~~C~~~-------------------~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~   72 (249)
                      +.|..+||.++++|...                   +++.+|.++|+.-+++|....++|.|.|+.||+|..|+.     
T Consensus      3865 d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~~Ce~----- 3939 (4289)
T KOG1219|consen 3865 DPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGKRCEA----- 3939 (4289)
T ss_pred             cccccCcccCCCEecCCCCCceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccCceeec-----
Confidence            88999999999999776                   688999999999999999999999999999999988872     


Q ss_pred             cCCccccCCCCCCceecCcccccCCCCCCC-CeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         73 TDTRTAESGGKSHECVDVNECELNLDSCAN-GRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        73 ~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~-g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                                     ..|++|+  .++|.+ |.|+|.+|+|.|.|.+||.    |++|.+
T Consensus      3940 ---------------~Gi~eCs--~n~C~~gg~C~n~~gsf~CncT~g~~----gr~c~~ 3978 (4289)
T KOG1219|consen 3940 ---------------RGISECS--KNVCGTGGQCINIPGSFHCNCTPGIL----GRTCCA 3978 (4289)
T ss_pred             ---------------ccccccc--cccccCCceeeccCCceEeccChhHh----cccCcc
Confidence                           2489998  489995 5999999999999999998    777743

>KOG4289|consensus

Probab=98.87  E-value=2.1e-09  Score=103.53  Aligned_cols=127  Identities=24%  Similarity=0.525  Sum_probs=91.3

Q ss_pred             cCcccCCCCCCCCcceeeCCCCCccCCCCCCCC--CCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCce
Q psy11797         10 DVDECRTPANTCKFSCKNLIDVDECRTPANTCK--FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHEC   87 (249)
Q Consensus        10 di~eC~~~~~~c~~~C~~~~did~C~~~~~~c~--~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C   87 (249)
                      |-|-|...||.+-+.|+.....|.=+.....-.  ..=++..+++.|+||+||+|+.|+                     
T Consensus      1178 dDniClrEPCenymkCvsvlrFdssapf~~s~s~lfRpi~pvnglrCrCPpGFTgd~Ce--------------------- 1236 (2531)
T KOG4289|consen 1178 DDNICLREPCENYMKCVSVLRFDSSAPFLASDSVLFRPIHPVNGLRCRCPPGFTGDYCE--------------------- 1236 (2531)
T ss_pred             cCchhhcchhHHHHhhhhheeecccCccccccceeeeeccccCceeEeCCCCCCccccc---------------------
Confidence            346788888877788877632221111000000  122356788999999999998887                     


Q ss_pred             ecCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCcccccccc-
Q psy11797         88 VDVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRS-  165 (249)
Q Consensus        88 ~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~-  165 (249)
                      +.||+|-.  ++|. +|.|...+|+|+|.|.+||+    |.+|+....             .-.|-..-|++.++|.+. 
T Consensus      1237 TeiDlCYs--~pC~nng~C~srEggYtCeCrpg~t----GehCEvs~~-------------agrCvpGvC~nggtC~~~~ 1297 (2531)
T KOG4289|consen 1237 TEIDLCYS--GPCGNNGRCRSREGGYTCECRPGFT----GEHCEVSAR-------------AGRCVPGVCKNGGTCVNLL 1297 (2531)
T ss_pred             chhHhhhc--CCCCCCCceEEecCceeEEecCCcc----ccceeeecc-------------cCccccceecCCCEEeecC
Confidence            68999985  8999 78999999999999999999    999976211             112333447899999987 


Q ss_pred             CCCCcccCCCC
Q psy11797        166 LTNGRCVLPTG  176 (249)
Q Consensus       166 ~~~~~C~c~~g  176 (249)
                      .+++.|+|++|
T Consensus      1298 nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1298 NGGFCCHCPYG 1308 (2531)
T ss_pred             CCceeccCCCc
Confidence            45688999988

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.68  E-value=2.3e-08  Score=59.68  Aligned_cols=40  Identities=48%  Similarity=1.066  Sum_probs=34.3

Q ss_pred             cCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCC
Q psy11797         89 DVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQ  128 (249)
Q Consensus        89 ~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~  128 (249)
                      |||||+...+.|. ++.|+|+.|+|+|.|++||.+...+..
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~~~~~~   41 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELNDDGTT   41 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEECTTSSE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEECCCCCc
Confidence            6899998778898 679999999999999999996655544

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.57  E-value=6e-08  Score=57.87  Aligned_cols=34  Identities=47%  Similarity=1.090  Sum_probs=29.8

Q ss_pred             CCCccCCCCCCCC--CCceecCCCeeeecCCCcccc
Q psy11797         30 DVDECRTPANTCK--FSCKNLIGSYMCTCPPGYQQV   63 (249)
Q Consensus        30 did~C~~~~~~c~--~~C~n~~gsy~C~C~~G~~g~   63 (249)
                      |||||+..++.|.  +.|+|+.|+|+|.|++||+..
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~~   36 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYELN   36 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEEC
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEEC
Confidence            6888888777776  899999999999999999843

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>KOG1217|consensus

Probab=98.48  E-value=1.8e-06  Score=77.94  Aligned_cols=192  Identities=28%  Similarity=0.498  Sum_probs=115.5

Q ss_pred             CccCCCCCCCC--CCceecCCCeeeecCCCccccCCCccc-cccc---CCccccCCCCCCce-ecCcccccCCCCCCCCe
Q psy11797         32 DECRTPANTCK--FSCKNLIGSYMCTCPPGYQQVTHSTVA-IATT---DTRTAESGGKSHEC-VDVNECELNLDSCANGR  104 (249)
Q Consensus        32 d~C~~~~~~c~--~~C~n~~gsy~C~C~~G~~g~~~~~~~-~~~~---~~~~~~~~~~~~~C-~~i~~C~~~~~~C~~g~  104 (249)
                      ++|......|.  +.|.+..++|.|.|++||.+..++... ...+   ....+..++.+..| .++.++..  .  . +.
T Consensus       170 ~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~~~~~--~--~-~~  244 (487)
T KOG1217|consen  170 DECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPECEVSIVECAS--G--D-GT  244 (487)
T ss_pred             cccccCCCCcCCCcccccCCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCcccccccccC--C--C-Cc
Confidence            67775554444  789999999999999999998776320 0000   11222233333333 12333332  1  2 68


Q ss_pred             eeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCccCC-C
Q psy11797        105 CVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLME-V  183 (249)
Q Consensus       105 C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~~-~  183 (249)
                      |+++.++|.|.|++||.+... ..+.++++|....               .+.++++|.+..+.|.|.|..+|.+... .
T Consensus       245 c~~~~~~~~C~~~~g~~~~~~-~~~~~~~~C~~~~---------------~c~~~~~C~~~~~~~~C~C~~g~~g~~~~~  308 (487)
T KOG1217|consen  245 CVNTVGSYTCRCPEGYTGDAC-VTCVDVDSCALIA---------------SCPNGGTCVNVPGSYRCTCPPGFTGRLCTE  308 (487)
T ss_pred             ccccCCceeeeCCCCcccccc-ceeeeccccCCCC---------------ccCCCCeeecCCCcceeeCCCCCCCCCCcc
Confidence            999999999999999984321 2344444433211               1567899999988899999999988753 1


Q ss_pred             CcceeecCCC-----CccCCCCccCCCCCCchhhccCCCCCccCCC-CCC-cccccCCCCC-CCCcccc-cccCC
Q psy11797        184 TRMDCCCTMG-----MAWGPQCQLCPTRGSQEYTDLCLESGLTVDG-RDI-DECVTIPAVE-SSKLAKM-FLRAY  249 (249)
Q Consensus       184 ~~~~C~C~~g-----~~~g~~C~~C~~~~~~~~~c~Cp~~G~~~~~-~di-deC~~~~~~C-~ng~c~~-~~~~y  249 (249)
                      ......|...     ..++.+|.  .......|.|.| ..||.+.. ++. ++|...+  + ..+.|++ ..++|
T Consensus       309 ~~~~~~C~~~~~~~~c~~g~~C~--~~~~~~~~~C~c-~~~~~g~~C~~~~~~C~~~~--~~~~~~c~~~~~~~~  378 (487)
T KOG1217|consen  309 CVDVDECSPRNAGGPCANGGTCN--TLGSFGGFRCAC-GPGFTGRRCEDSNDECASSP--CCPGGTCVNETPGSY  378 (487)
T ss_pred             ccccccccccccCCcCCCCcccc--cCCCCCCCCcCC-CCCCCCCccccCCccccCCc--cccCCEeccCCCCCe
Confidence            1111223221     12233551  133445678999 67877755 455 5998877  5 5577887 44443

>KOG1217|consensus

Probab=98.35  E-value=4.7e-06  Score=75.26  Aligned_cols=170  Identities=26%  Similarity=0.476  Sum_probs=104.7

Q ss_pred             CCceec---CCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCCCcceeecCC
Q psy11797         43 FSCKNL---IGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECER  118 (249)
Q Consensus        43 ~~C~n~---~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~  118 (249)
                      +.|.+.   ...|.|.|..||.+..+.                     ...++|......|. .+.|.+..++|.|.|++
T Consensus       140 ~~c~~~~~~~~~~~c~C~~g~~~~~~~---------------------~~~~~C~~~~~~c~~~~~C~~~~~~~~C~c~~  198 (487)
T KOG1217|consen  140 GSCSNGPGSVGPFRCSCTEGYEGEPCE---------------------TDLDECIQYSSPCQNGGTCVNTGGSYLCSCPP  198 (487)
T ss_pred             hhhcCCCCCCCceeeeeCCCccccccc---------------------ccccccccCCCCcCCCcccccCCCCeeEeCCC
Confidence            566654   357999999999987665                     23367875556788 45899999999999999


Q ss_pred             CceeCCCCCCcccC---CCccceeeeecCCc-ccccccC--CCCCcc-ccccccCCCCcccCCCCCCccC---CCCccee
Q psy11797        119 GFKLSLDGKQCLGK---GQFVEFRIILSMPK-AENSVNN--NNNQRL-GFCYRSLTNGRCVLPTGPALLM---EVTRMDC  188 (249)
Q Consensus       119 G~~~~~~g~~C~~~---~~~~~~~~~~~~~~-~~~~~~~--~~~~~~-~~C~~~~~~~~C~c~~g~~~~~---~~~~~~C  188 (249)
                      +|.    +..++..   ..+.........+. ....+..  ..+... +.|.+..+++.|.+..+|++..   .....+|
T Consensus       199 ~~~----~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~~~~~~~~~c~~~~~~~~C~~~~g~~~~~~~~~~~~~~C  274 (487)
T KOG1217|consen  199 GYT----GSTCETTGNGGTCVDSVACSCPPGARGPECEVSIVECASGDGTCVNTVGSYTCRCPEGYTGDACVTCVDVDSC  274 (487)
T ss_pred             Ccc----CCcCcCCCCCceEecceeccCCCCCCCCCcccccccccCCCCcccccCCceeeeCCCCccccccceeeecccc
Confidence            998    4444331   11111000000000 0001111  112222 8899999999999999998773   1245556


Q ss_pred             ecCCCCccCCCCccCCCCCCchhhccCCCCCccCCCC----CCccccc--CCCCCCCC-cc
Q psy11797        189 CCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGR----DIDECVT--IPAVESSK-LA  242 (249)
Q Consensus       189 ~C~~g~~~g~~C~~C~~~~~~~~~c~Cp~~G~~~~~~----dideC~~--~~~~C~ng-~c  242 (249)
                      .-.....++.+|    +...+.|.|.| .+||++...    ++++|..  ....|.++ .|
T Consensus       275 ~~~~~c~~~~~C----~~~~~~~~C~C-~~g~~g~~~~~~~~~~~C~~~~~~~~c~~g~~C  330 (487)
T KOG1217|consen  275 ALIASCPNGGTC----VNVPGSYRCTC-PPGFTGRLCTECVDVDECSPRNAGGPCANGGTC  330 (487)
T ss_pred             CCCCccCCCCee----ecCCCcceeeC-CCCCCCCCCccccccccccccccCCcCCCCccc
Confidence            533212346677    45555599999 699999653    5578864  34458665 66

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=98.23  E-value=9e-07  Score=50.55  Aligned_cols=32  Identities=50%  Similarity=1.161  Sum_probs=26.8

Q ss_pred             CCCCCCCeeeeCCCcceeecCCCceeCCCCCCc
Q psy11797         97 LDSCANGRCVNLEGSYRCECERGFKLSLDGKQC  129 (249)
Q Consensus        97 ~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C  129 (249)
                      .+.|.| .|++++++|+|.|++||.|..|+++|
T Consensus         5 NGgC~h-~C~~~~g~~~C~C~~Gy~L~~D~~tC   36 (36)
T PF14670_consen    5 NGGCSH-ICVNTPGSYRCSCPPGYKLAEDGRTC   36 (36)
T ss_dssp             GGGSSS-EEEEETTSEEEE-STTEEE-TTSSSE
T ss_pred             CCCcCC-CCccCCCceEeECCCCCEECcCCCCC
Confidence            466777 89999999999999999999999876

...

>KOG4260|consensus

Probab=98.14  E-value=1.5e-06  Score=71.03  Aligned_cols=67  Identities=42%  Similarity=0.955  Sum_probs=54.7

Q ss_pred             CCCCccCCCCCCCC--CCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC--CCe
Q psy11797         29 IDVDECRTPANTCK--FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA--NGR  104 (249)
Q Consensus        29 ~did~C~~~~~~c~--~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~--~g~  104 (249)
                      +|||||...+..|.  +.|+|+.|||.|...+||.+                          ++|+|+.-...|.  +..
T Consensus       234 vDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~--------------------------g~d~C~~~~d~~~~kn~~  287 (350)
T KOG4260|consen  234 VDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKK--------------------------GVDECQFCADVCASKNRP  287 (350)
T ss_pred             ccHHHHhcCCCCCChhheeecCCCceEecccccccC--------------------------ChHHhhhhhhhcccCCCC
Confidence            79999999888887  79999999999999999975                          3455553223444  568


Q ss_pred             eeeCCCcceeecCCCce
Q psy11797        105 CVNLEGSYRCECERGFK  121 (249)
Q Consensus       105 C~~~~g~~~C~C~~G~~  121 (249)
                      |.|+.+.|+|.|..|+.
T Consensus       288 c~ni~~~~r~v~f~~~~  304 (350)
T KOG4260|consen  288 CMNIDGQYRCVCFSGLI  304 (350)
T ss_pred             cccCCccEEEEecccce
Confidence            99999999999999876

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=98.06  E-value=2.9e-06  Score=43.67  Aligned_cols=24  Identities=42%  Similarity=0.991  Sum_probs=22.1

Q ss_pred             cceeecCCCceeCCCCCCcccCCC
Q psy11797        111 SYRCECERGFKLSLDGKQCLGKGQ  134 (249)
Q Consensus       111 ~~~C~C~~G~~~~~~g~~C~~~~~  134 (249)
                      +|+|.|++||.+..++++|++|+|
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            689999999999999999999875

>KOG4289|consensus

Probab=97.96  E-value=5.7e-06  Score=80.74  Aligned_cols=91  Identities=21%  Similarity=0.327  Sum_probs=69.1

Q ss_pred             eeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCccC-CCC
Q psy11797        106 VNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLM-EVT  184 (249)
Q Consensus       106 ~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~-~~~  184 (249)
                      ++..++++|.||+||+    +..|+.               ..+.|...+|.+++.|....++|+|.|.++|++.. +++
T Consensus      1216 i~pvnglrCrCPpGFT----gd~CeT---------------eiDlCYs~pC~nng~C~srEggYtCeCrpg~tGehCEvs 1276 (2531)
T KOG4289|consen 1216 IHPVNGLRCRCPPGFT----GDYCET---------------EIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGEHCEVS 1276 (2531)
T ss_pred             ccccCceeEeCCCCCC----cccccc---------------hhHhhhcCCCCCCCceEEecCceeEEecCCccccceeee
Confidence            4556789999999999    778865               44567888999999999999999999999999876 333


Q ss_pred             cceeecCCCC-ccCCCCccCCCCCCchhhccCCCCC
Q psy11797        185 RMDCCCTMGM-AWGPQCQLCPTRGSQEYTDLCLESG  219 (249)
Q Consensus       185 ~~~C~C~~g~-~~g~~C~~C~~~~~~~~~c~Cp~~G  219 (249)
                      ...=.|.+|+ .+|.+|+   ....++|.|.|| .|
T Consensus      1277 ~~agrCvpGvC~nggtC~---~~~nggf~c~Cp-~g 1308 (2531)
T KOG4289|consen 1277 ARAGRCVPGVCKNGGTCV---NLLNGGFCCHCP-YG 1308 (2531)
T ss_pred             cccCccccceecCCCEEe---ecCCCceeccCC-Cc
Confidence            2222344555 3477774   667788999995 44

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=97.95  E-value=7.2e-06  Score=42.17  Aligned_cols=24  Identities=50%  Similarity=1.227  Sum_probs=21.0

Q ss_pred             CeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcc
Q psy11797         51 SYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNE   92 (249)
Q Consensus        51 sy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~   92 (249)
                      ||+|+|++||+.....                  +.|+||||
T Consensus         1 sy~C~C~~Gy~l~~d~------------------~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDG------------------RSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCC------------------CccccCCC
Confidence            6999999999987766                  78999986

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=97.85  E-value=1.5e-05  Score=45.47  Aligned_cols=33  Identities=39%  Similarity=0.994  Sum_probs=25.9

Q ss_pred             cCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         34 CRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      |......|..+|++++++|+|.|++||++....
T Consensus         1 C~~~NGgC~h~C~~~~g~~~C~C~~Gy~L~~D~   33 (36)
T PF14670_consen    1 CSVNNGGCSHICVNTPGSYRCSCPPGYKLAEDG   33 (36)
T ss_dssp             CTTGGGGSSSEEEEETTSEEEE-STTEEE-TTS
T ss_pred             CCCCCCCcCCCCccCCCceEeECCCCCEECcCC
Confidence            344556788999999999999999999987755

...

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.80  E-value=2.7e-05  Score=45.12  Aligned_cols=35  Identities=43%  Similarity=0.950  Sum_probs=26.4

Q ss_pred             CCCccCC-CCCCCCCCceecCCCeeeecCCCcc-ccC
Q psy11797         30 DVDECRT-PANTCKFSCKNLIGSYMCTCPPGYQ-QVT   64 (249)
Q Consensus        30 did~C~~-~~~~c~~~C~n~~gsy~C~C~~G~~-g~~   64 (249)
                      ++|+|.. .++...++|+++.++|.|.|++||. |..
T Consensus         1 d~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g~~   37 (39)
T smart00179        1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGRN   37 (39)
T ss_pred             CcccCcCCCCcCCCCEeECCCCCeEeECCCCCccCCc
Confidence            4677776 3444446899999999999999998 543

>KOG4260|consensus

Probab=97.69  E-value=1.9e-05  Score=64.74  Aligned_cols=73  Identities=33%  Similarity=0.585  Sum_probs=54.4

Q ss_pred             CceecCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCcccccc
Q psy11797         85 HECVDVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCY  163 (249)
Q Consensus        85 ~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~  163 (249)
                      ..|+|||||...+.+|. +..|+|+.|+|.|...+||..+  ...|+.   ++                ..-...+..|.
T Consensus       231 ~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g--~d~C~~---~~----------------d~~~~kn~~c~  289 (350)
T KOG4260|consen  231 EGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKKG--VDECQF---CA----------------DVCASKNRPCM  289 (350)
T ss_pred             cccccHHHHhcCCCCCChhheeecCCCceEecccccccCC--hHHhhh---hh----------------hhcccCCCCcc
Confidence            56899999998889998 7799999999999999999732  222221   00                00013467889


Q ss_pred             ccCCCCcccCCCCCC
Q psy11797        164 RSLTNGRCVLPTGPA  178 (249)
Q Consensus       164 ~~~~~~~C~c~~g~~  178 (249)
                      ++.++|+|.+..++.
T Consensus       290 ni~~~~r~v~f~~~~  304 (350)
T KOG4260|consen  290 NIDGQYRCVCFSGLI  304 (350)
T ss_pred             cCCccEEEEecccce
Confidence            999999999988865

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.53  E-value=4.7e-05  Score=43.52  Aligned_cols=31  Identities=42%  Similarity=0.943  Sum_probs=22.8

Q ss_pred             cCCCCCCCC--CCceecCCCeeeecCCCccccC
Q psy11797         34 CRTPANTCK--FSCKNLIGSYMCTCPPGYQQVT   64 (249)
Q Consensus        34 C~~~~~~c~--~~C~n~~gsy~C~C~~G~~g~~   64 (249)
                      |+.+++.|.  ++|+++.++|.|.|++||+|++
T Consensus         1 C~~~~~~C~~nA~C~~~~~~~~C~C~~Gy~GdG   33 (36)
T PF12947_consen    1 CLENNGGCHPNATCTNTGGSYTCTCKPGYEGDG   33 (36)
T ss_dssp             TTTGGGGS-TTCEEEE-TTSEEEEE-CEEECCS
T ss_pred             CCCCCCCCCCCcEeecCCCCEEeECCCCCccCC
Confidence            344455565  8999999999999999999976

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.51  E-value=6.2e-05  Score=41.89  Aligned_cols=30  Identities=37%  Similarity=0.897  Sum_probs=23.3

Q ss_pred             cCCCCCCCCCCceecC-CCeeeecCCCcccc
Q psy11797         34 CRTPANTCKFSCKNLI-GSYMCTCPPGYQQV   63 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~-gsy~C~C~~G~~g~   63 (249)
                      |.+.++..+++|++.. ++|.|.|++||+|.
T Consensus         1 C~~~~C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    1 CSSNPCQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TTTTSSTTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             CCCCcCCCCeEEEeCCCCCEEeECCCCCccC
Confidence            3444555567888887 88999999999985

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.45  E-value=0.00018  Score=41.15  Aligned_cols=36  Identities=42%  Similarity=0.926  Sum_probs=26.8

Q ss_pred             CCCccCC-CCCCCCCCceecCCCeeeecCCCccccCC
Q psy11797         30 DVDECRT-PANTCKFSCKNLIGSYMCTCPPGYQQVTH   65 (249)
Q Consensus        30 did~C~~-~~~~c~~~C~n~~gsy~C~C~~G~~g~~~   65 (249)
                      ++++|.. .++...+.|++..++|.|.|++||.|..+
T Consensus         1 ~~~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~~C   37 (38)
T cd00054           1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRNC   37 (38)
T ss_pred             CcccCCCCCCcCCCCEeECCCCCeEeECCCCCcCCcC
Confidence            3566765 34443578999999999999999988543

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.41  E-value=0.00021  Score=41.24  Aligned_cols=37  Identities=51%  Similarity=1.296  Sum_probs=28.3

Q ss_pred             cCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCc
Q psy11797         89 DVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQC  129 (249)
Q Consensus        89 ~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C  129 (249)
                      ++++|... .+|. ++.|+++.++|.|.|++||.   +++.|
T Consensus         1 d~~~C~~~-~~C~~~~~C~~~~g~~~C~C~~g~~---~g~~C   38 (39)
T smart00179        1 DIDECASG-NPCQNGGTCVNTVGSYRCECPPGYT---DGRNC   38 (39)
T ss_pred             CcccCcCC-CCcCCCCEeECCCCCeEeECCCCCc---cCCcC
Confidence            35677642 6787 45999999999999999997   35554

>KOG1225|consensus

Probab=97.33  E-value=0.0011  Score=60.51  Aligned_cols=121  Identities=27%  Similarity=0.601  Sum_probs=67.9

Q ss_pred             eeecCCCccccCCCccccc---------ccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCCCcceeecCCCcee
Q psy11797         53 MCTCPPGYQQVTHSTVAIA---------TTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECERGFKL  122 (249)
Q Consensus        53 ~C~C~~G~~g~~~~~~~~~---------~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~  122 (249)
                      .|.|+.+|.+..+......         .-..++|..||++..|.. -.|.   ..|. ++.+++  +  .|.|++||. 
T Consensus       235 ic~c~~~~~g~~c~~~~C~~~c~~~g~c~~G~CIC~~Gf~G~dC~e-~~Cp---~~cs~~g~~~~--g--~CiC~~g~~-  305 (525)
T KOG1225|consen  235 ICECPEGYFGPLCSTIYCPGGCTGRGQCVEGRCICPPGFTGDDCDE-LVCP---VDCSGGGVCVD--G--ECICNPGYS-  305 (525)
T ss_pred             eeecCCceeCCccccccCCCCCcccceEeCCeEeCCCCCcCCCCCc-ccCC---cccCCCceecC--C--EeecCCCcc-
Confidence            6777777777666522110         112245666666666643 2344   2355 445543  3  788999988 


Q ss_pred             CCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCccCCCCcceeecCCCCccCCCCcc
Q psy11797        123 SLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQL  202 (249)
Q Consensus       123 ~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~~~~~~~C~C~~g~~~g~~C~~  202 (249)
                         |+.|+...                 | ...|...+.|.    ...|.|.+||++....... |.      .+..|+ 
T Consensus       306 ---G~dCs~~~-----------------c-padC~g~G~Ci----~G~C~C~~Gy~G~~C~~~~-C~------~~g~cv-  352 (525)
T KOG1225|consen  306 ---GKDCSIRR-----------------C-PADCSGHGKCI----DGECLCDEGYTGELCIQRA-CS------GGGQCV-  352 (525)
T ss_pred             ---cccccccc-----------------C-CccCCCCCccc----CCceEeCCCCcCCcccccc-cC------CCceec-
Confidence               77776511                 1 12356777777    3458888888877533331 21      233441 


Q ss_pred             CCCCCCchhhccCCCCCccCCC
Q psy11797        203 CPTRGSQEYTDLCLESGLTVDG  224 (249)
Q Consensus       203 C~~~~~~~~~c~Cp~~G~~~~~  224 (249)
                            . - |.| ..||+|..
T Consensus       353 ------~-g-C~C-~~Gw~G~d  365 (525)
T KOG1225|consen  353 ------N-G-CKC-KKGWRGPD  365 (525)
T ss_pred             ------c-C-cee-ccCccCCC
Confidence                  1 2 777 78888753

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.25  E-value=0.00021  Score=40.85  Aligned_cols=31  Identities=42%  Similarity=0.972  Sum_probs=22.2

Q ss_pred             CCCCC-CCeeeeCCCcceeecCCCceeCCCCCCc
Q psy11797         97 LDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQC  129 (249)
Q Consensus        97 ~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C  129 (249)
                      .+.|. ++.|++++++|.|.|++||.  .+|..|
T Consensus         5 ~~~C~~nA~C~~~~~~~~C~C~~Gy~--GdG~~C   36 (36)
T PF12947_consen    5 NGGCHPNATCTNTGGSYTCTCKPGYE--GDGFFC   36 (36)
T ss_dssp             GGGS-TTCEEEE-TTSEEEEE-CEEE--CCSTCE
T ss_pred             CCCCCCCcEeecCCCCEEeECCCCCc--cCCcCC
Confidence            45677 78999999999999999998  335443

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>PF00683 TB: TB domain; InterPro: IPR002212 Transforming growth factor beta (TGF-beta)-binding protein-like (TB) domain comes from human fibrillin-1[]

Probab=96.87  E-value=0.00017  Score=42.66  Aligned_cols=30  Identities=47%  Similarity=1.367  Sum_probs=23.2

Q ss_pred             CCcceeecCCCCccCCCCccCCCCCCchhh
Q psy11797        183 VTRMDCCCTMGMAWGPQCQLCPTRGSQEYT  212 (249)
Q Consensus       183 ~~~~~C~C~~g~~~g~~C~~C~~~~~~~~~  212 (249)
                      +++.+|.|+.|.+||..|++||.+++..|.
T Consensus        11 ~tk~~CCCs~G~aWG~~Ce~CP~~~t~ef~   40 (42)
T PF00683_consen   11 VTKSECCCSVGRAWGSPCEPCPPPGTDEFN   40 (42)
T ss_dssp             EEHHHHHTTT-SEETTTTEE---TTSHHHH
T ss_pred             eeccccCCCCCCcCCCccccCCCCCChHHh
Confidence            577899999999999999999999998775

This domain is found in fibrillins and latent TGF-beta-binding proteins (LTBPs) which are localized to fibrillar structures in the extracellular matrix [].; GO: 0005488 binding; PDB: 2W86_A 1UZJ_B 1UZQ_A 1UZK_A 1UZP_A 1APJ_A 1KSQ_A.

>KOG1225|consensus

Probab=96.80  E-value=0.0091  Score=54.54  Aligned_cols=74  Identities=23%  Similarity=0.402  Sum_probs=42.3

Q ss_pred             eeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCccCCCCcceeecCC
Q psy11797        113 RCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM  192 (249)
Q Consensus       113 ~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~~~~~~~C~C~~  192 (249)
                      +|.|++||+    |..|...                 .|... |..++.+++.    .|.|.++|.+.... ..+|  ..
T Consensus       266 ~CIC~~Gf~----G~dC~e~-----------------~Cp~~-cs~~g~~~~g----~CiC~~g~~G~dCs-~~~c--pa  316 (525)
T KOG1225|consen  266 RCICPPGFT----GDDCDEL-----------------VCPVD-CSGGGVCVDG----ECICNPGYSGKDCS-IRRC--PA  316 (525)
T ss_pred             eEeCCCCCc----CCCCCcc-----------------cCCcc-cCCCceecCC----EeecCCCccccccc-cccC--Cc
Confidence            689999998    8777651                 12222 3444555432    58888888766421 1112  22


Q ss_pred             CCccCCCCccCCCCCCchhhccCCCCCccCCC
Q psy11797        193 GMAWGPQCQLCPTRGSQEYTDLCLESGLTVDG  224 (249)
Q Consensus       193 g~~~g~~C~~C~~~~~~~~~c~Cp~~G~~~~~  224 (249)
                      .....+.|    ++    -+|.| .+||+|+-
T Consensus       317 dC~g~G~C----i~----G~C~C-~~Gy~G~~  339 (525)
T KOG1225|consen  317 DCSGHGKC----ID----GECLC-DEGYTGEL  339 (525)
T ss_pred             cCCCCCcc----cC----CceEe-CCCCcCCc
Confidence            22123445    33    45999 79999964

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.79  E-value=0.0019  Score=36.65  Aligned_cols=35  Identities=46%  Similarity=1.249  Sum_probs=26.8

Q ss_pred             CcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCc
Q psy11797         90 VNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQC  129 (249)
Q Consensus        90 i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C  129 (249)
                      +++|... .+|. ++.|++..+.|.|.|+.||.    ++.|
T Consensus         2 ~~~C~~~-~~C~~~~~C~~~~~~~~C~C~~g~~----g~~C   37 (38)
T cd00054           2 IDECASG-NPCQNGGTCVNTVGSYRCSCPPGYT----GRNC   37 (38)
T ss_pred             cccCCCC-CCcCCCCEeECCCCCeEeECCCCCc----CCcC
Confidence            4566532 5677 56999999999999999998    5555

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.63  E-value=0.0018  Score=35.90  Aligned_cols=24  Identities=42%  Similarity=1.284  Sum_probs=21.6

Q ss_pred             CCCC-CCeeeeCC-CcceeecCCCce
Q psy11797         98 DSCA-NGRCVNLE-GSYRCECERGFK  121 (249)
Q Consensus        98 ~~C~-~g~C~~~~-g~~~C~C~~G~~  121 (249)
                      ++|. +|+|++.. +.|.|.|++||.
T Consensus         4 ~~C~n~g~C~~~~~~~y~C~C~~G~~   29 (32)
T PF00008_consen    4 NPCQNGGTCIDLPGGGYTCECPPGYT   29 (32)
T ss_dssp             TSSTTTEEEEEESTSEEEEEEBTTEE
T ss_pred             CcCCCCeEEEeCCCCCEEeECCCCCc
Confidence            5888 46999998 999999999998

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.35  E-value=0.0049  Score=34.31  Aligned_cols=21  Identities=52%  Similarity=1.103  Sum_probs=19.1

Q ss_pred             CCceecCCCeeeecCCCcccc
Q psy11797         43 FSCKNLIGSYMCTCPPGYQQV   63 (249)
Q Consensus        43 ~~C~n~~gsy~C~C~~G~~g~   63 (249)
                      +.|++..++|.|.|+.||.+.
T Consensus        12 ~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053          12 GTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CEEecCCCCeEeECCCCCccc
Confidence            788888899999999999885

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=96.32  E-value=0.0038  Score=51.21  Aligned_cols=44  Identities=32%  Similarity=0.712  Sum_probs=36.7

Q ss_pred             CCCceecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCC
Q psy11797         83 KSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGK  127 (249)
Q Consensus        83 ~~~~C~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~  127 (249)
                      .+..|.++++|....+.|.+ .|.++.|+|.|.|++||.+..+++
T Consensus       180 ~~~~C~~~~~C~~~~~~c~~-~C~~~~g~~~c~c~~g~~~~~~~~  223 (224)
T cd01475         180 QGKICVVPDLCATLSHVCQQ-VCISTPGSYLCACTEGYALLEDNK  223 (224)
T ss_pred             ccccCcCchhhcCCCCCccc-eEEcCCCCEEeECCCCccCCCCCC
Confidence            44568889999876677886 899999999999999999876654

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.32  E-value=0.0052  Score=34.46  Aligned_cols=19  Identities=58%  Similarity=1.399  Sum_probs=17.8

Q ss_pred             CceecCCCeeeecCCCccc
Q psy11797         44 SCKNLIGSYMCTCPPGYQQ   62 (249)
Q Consensus        44 ~C~n~~gsy~C~C~~G~~g   62 (249)
                      +|++..++|.|+|++||.|
T Consensus        12 ~C~~~~~~~~C~C~~g~~g   30 (35)
T smart00181       12 TCINTPGSYTCSCPPGYTG   30 (35)
T ss_pred             EEECCCCCeEeECCCCCcc
Confidence            7888899999999999988

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.21  E-value=0.007  Score=33.91  Aligned_cols=24  Identities=46%  Similarity=1.247  Sum_probs=20.7

Q ss_pred             CCCCCCeeeeCCCcceeecCCCce
Q psy11797         98 DSCANGRCVNLEGSYRCECERGFK  121 (249)
Q Consensus        98 ~~C~~g~C~~~~g~~~C~C~~G~~  121 (249)
                      .+|.+++|+++.++|.|.|++||.
T Consensus         6 ~~C~~~~C~~~~~~~~C~C~~g~~   29 (35)
T smart00181        6 GPCSNGTCINTPGSYTCSCPPGYT   29 (35)
T ss_pred             CCCCCCEEECCCCCeEeECCCCCc
Confidence            467743899999999999999998

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=96.19  E-value=0.0014  Score=51.16  Aligned_cols=135  Identities=24%  Similarity=0.558  Sum_probs=72.6

Q ss_pred             CCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccC---CCCCC-CCeeeeCC-----Ccce
Q psy11797         43 FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELN---LDSCA-NGRCVNLE-----GSYR  113 (249)
Q Consensus        43 ~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~---~~~C~-~g~C~~~~-----g~~~  113 (249)
                      +..+.+...|.|.|.+||.... +                  .+|+...+|...   ..+|. .+.|++.+     ..|.
T Consensus        11 G~LiQMSNHfEC~Cnegfvl~~-E------------------ntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~   71 (197)
T PF06247_consen   11 GYLIQMSNHFECKCNEGFVLKN-E------------------NTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYK   71 (197)
T ss_dssp             EEEEEESSEEEEEESTTEEEEE-T------------------TEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEE
T ss_pred             CEEEEccCceEEEcCCCcEEcc-c------------------cccccceecCcccccCccccchhhhhcCCCcccceeEE
Confidence            4455567789999999998763 2                  578888788752   34687 57898865     5799


Q ss_pred             eecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCcccccccc---CCCCcccCCCCCCccCCCCcceeec
Q psy11797        114 CECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRS---LTNGRCVLPTGPALLMEVTRMDCCC  190 (249)
Q Consensus       114 C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~---~~~~~C~c~~g~~~~~~~~~~~C~C  190 (249)
                      |.|.+||.+..+  .|.+                 ..|+...|. .|.|+-.   .....|+|.-|++..   +...|. 
T Consensus        72 C~C~~gY~~~~~--vCvp-----------------~~C~~~~Cg-~GKCI~d~~~~~~~~CSC~IGkV~~---dn~kCt-  127 (197)
T PF06247_consen   72 CDCINGYILKQG--VCVP-----------------NKCNNKDCG-SGKCILDPDNPNNPTCSCNIGKVPD---DNKKCT-  127 (197)
T ss_dssp             EEE-TTEEESSS--SEEE-----------------GGGSS---T-TEEEEEEEGGGSEEEEEE-TEEETT---TTTESE-
T ss_pred             EecccCceeeCC--eEch-----------------hhcCceecC-CCeEEecCCCCCCceeEeeeceEec---cCCccc-
Confidence            999999997643  5654                 122222233 4555432   223478888888722   233332 


Q ss_pred             CCCCccCCCCc-------cCCCCCCchhhccCCCCCccCCCC
Q psy11797        191 TMGMAWGPQCQ-------LCPTRGSQEYTDLCLESGLTVDGR  225 (249)
Q Consensus       191 ~~g~~~g~~C~-------~C~~~~~~~~~c~Cp~~G~~~~~~  225 (249)
                      ..|   --.|.       .| .....-|+|.| ..||.++++
T Consensus       128 k~G---~T~C~LKCk~nE~C-K~~~~~Y~C~~-~~~~~~~~~  164 (197)
T PF06247_consen  128 KTG---ETKCSLKCKENEEC-KLVDGYYKCVC-KEGFPGDGE  164 (197)
T ss_dssp             EEE-----------TTTEEE-EEETTEEEEEE--TT-EEETT
T ss_pred             CCC---ccceeeecCCCcce-eeeCcEEEeec-CCCCCCCCC
Confidence            111   11122       12 22234588999 888877543

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.07  E-value=0.0089  Score=33.21  Aligned_cols=24  Identities=50%  Similarity=1.272  Sum_probs=21.0

Q ss_pred             CCCC-CCeeeeCCCcceeecCCCce
Q psy11797         98 DSCA-NGRCVNLEGSYRCECERGFK  121 (249)
Q Consensus        98 ~~C~-~g~C~~~~g~~~C~C~~G~~  121 (249)
                      .+|. ++.|+++.+.|.|.|+.||.
T Consensus         6 ~~C~~~~~C~~~~~~~~C~C~~g~~   30 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCVCPPGYT   30 (36)
T ss_pred             CCCCCCCEEecCCCCeEeECCCCCc
Confidence            5676 47999999999999999997

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=95.84  E-value=0.0073  Score=49.49  Aligned_cols=37  Identities=32%  Similarity=0.782  Sum_probs=32.5

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCC
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTH   65 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~   65 (249)
                      .++++|...++.|...|.++.|+|.|.|+.||++...
T Consensus       185 ~~~~~C~~~~~~c~~~C~~~~g~~~c~c~~g~~~~~~  221 (224)
T cd01475         185 VVPDLCATLSHVCQQVCISTPGSYLCACTEGYALLED  221 (224)
T ss_pred             cCchhhcCCCCCccceEEcCCCCEEeECCCCccCCCC
Confidence            4678999888889999999999999999999987543

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=94.29  E-value=0.028  Score=24.40  Aligned_cols=12  Identities=42%  Similarity=1.276  Sum_probs=9.2

Q ss_pred             eeecCCCccccC
Q psy11797         53 MCTCPPGYQQVT   64 (249)
Q Consensus        53 ~C~C~~G~~g~~   64 (249)
                      .|.|++||+|..
T Consensus         1 ~C~C~~G~~G~~   12 (13)
T PF12661_consen    1 TCQCPPGWTGPN   12 (13)
T ss_dssp             EEEE-TTEETTT
T ss_pred             CccCcCCCcCCC
Confidence            489999999864

>KOG0994|consensus

Probab=92.80  E-value=1.5  Score=43.78  Aligned_cols=60  Identities=25%  Similarity=0.348  Sum_probs=31.5

Q ss_pred             ccccCCCCcc-cCCCCCCccCC----CCcceeecCCCCccC----CCCccCCCCCCchhhccCCCCCccCCC
Q psy11797        162 CYRSLTNGRC-VLPTGPALLME----VTRMDCCCTMGMAWG----PQCQLCPTRGSQEYTDLCLESGLTVDG  224 (249)
Q Consensus       162 C~~~~~~~~C-~c~~g~~~~~~----~~~~~C~C~~g~~~g----~~C~~C~~~~~~~~~c~Cp~~G~~~~~  224 (249)
                      |.+..+++.| .|..||.++..    ..-..|.|..|.+.|    ..|.+  -+.+....|.| .+||+|..
T Consensus       878 CqD~T~G~~CdrCl~GyyGdP~lg~g~~CrPCpCP~gp~Sg~~~A~sC~~--d~~t~~ivC~C-~~GY~G~R  946 (1758)
T KOG0994|consen  878 CQDSTTGHSCDRCLDGYYGDPRLGSGIGCRPCPCPDGPASGRQHADSCYL--DTRTQQIVCHC-QEGYSGSR  946 (1758)
T ss_pred             ccccccccchhhhhccccCCcccCCCCCCCCCCCCCCCccchhccccccc--cccccceeeec-ccCccccc
Confidence            3445566666 67788877642    122344455443222    22311  11223446899 89999853

>KOG0994|consensus

Probab=92.56  E-value=0.34  Score=47.91  Aligned_cols=32  Identities=19%  Similarity=0.568  Sum_probs=21.5

Q ss_pred             CcccccCCCCCCCCeeeeCCCccee-ecCCCceeC
Q psy11797         90 VNECELNLDSCANGRCVNLEGSYRC-ECERGFKLS  123 (249)
Q Consensus        90 i~~C~~~~~~C~~g~C~~~~g~~~C-~C~~G~~~~  123 (249)
                      .+.|....+.|.  .|.+...++.| .|..||+..
T Consensus       865 A~~Cd~~tGaCi--~CqD~T~G~~CdrCl~GyyGd  897 (1758)
T KOG0994|consen  865 ADTCDPITGACI--DCQDSTTGHSCDRCLDGYYGD  897 (1758)
T ss_pred             ccccCccccccc--cccccccccchhhhhccccCC
Confidence            345554445555  36677788888 699999843

>KOG1226|consensus

Probab=90.28  E-value=3.5  Score=39.39  Aligned_cols=23  Identities=22%  Similarity=0.613  Sum_probs=16.9

Q ss_pred             CCceecCCCee---eecCCCccccCCC
Q psy11797         43 FSCKNLIGSYM---CTCPPGYQQVTHS   66 (249)
Q Consensus        43 ~~C~n~~gsy~---C~C~~G~~g~~~~   66 (249)
                      +.|. ..|.|.   |.|.+||.|..|+
T Consensus       467 ~~C~-g~G~~~CG~C~C~~G~~G~~CE  492 (783)
T KOG1226|consen  467 ALCH-GNGTFVCGQCRCDEGWLGKKCE  492 (783)
T ss_pred             cccC-CCCcEEecceecCCCCCCCccc
Confidence            4554 456666   4899999998887

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=89.90  E-value=0.52  Score=25.96  Aligned_cols=25  Identities=40%  Similarity=1.152  Sum_probs=19.3

Q ss_pred             CCC-CCeeeeCCCcceeecCCCceeCCCCCCc
Q psy11797         99 SCA-NGRCVNLEGSYRCECERGFKLSLDGKQC  129 (249)
Q Consensus        99 ~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C  129 (249)
                      .|. +|+|+..  ..+|.|.+||.    |..|
T Consensus         7 ~C~~~G~C~~~--~g~C~C~~g~~----G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSP--CGRCVCDSGYT----GPDC   32 (32)
T ss_pred             ccCCCCEEeCC--CCEEECCCCCc----CCCC
Confidence            466 7899876  46899999998    6554

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=88.26  E-value=0.39  Score=37.83  Aligned_cols=99  Identities=25%  Similarity=0.475  Sum_probs=53.0

Q ss_pred             CCceecC-----CCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeCC---Cccee
Q psy11797         43 FSCKNLI-----GSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLE---GSYRC  114 (249)
Q Consensus        43 ~~C~n~~-----gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~---g~~~C  114 (249)
                      +.|++.+     ..|.|.|.+||.....                    .|. .+.|..  -.|..|.|+-.+   ....|
T Consensus        56 a~C~~~~~~~~~~~~~C~C~~gY~~~~~--------------------vCv-p~~C~~--~~Cg~GKCI~d~~~~~~~~C  112 (197)
T PF06247_consen   56 AKCINQANKGEERAYKCDCINGYILKQG--------------------VCV-PNKCNN--KDCGSGKCILDPDNPNNPTC  112 (197)
T ss_dssp             EEEEE-SSTTSSTSEEEEE-TTEEESSS--------------------SEE-EGGGSS-----TTEEEEEEEGGGSEEEE
T ss_pred             hhhhcCCCcccceeEEEecccCceeeCC--------------------eEc-hhhcCc--eecCCCeEEecCCCCCCcee
Confidence            7787665     4699999999987653                    243 234552  467778897543   34589


Q ss_pred             ecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCcc
Q psy11797        115 ECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       115 ~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~  180 (249)
                      +|.-|+. -.+...|...++              ..|.+. |..+..|....+-|+|.+..++.+.
T Consensus       113 SC~IGkV-~~dn~kCtk~G~--------------T~C~LK-Ck~nE~CK~~~~~Y~C~~~~~~~~~  162 (197)
T PF06247_consen  113 SCNIGKV-PDDNKKCTKTGE--------------TKCSLK-CKENEECKLVDGYYKCVCKEGFPGD  162 (197)
T ss_dssp             EE-TEEE-TTTTTESEEEE-----------------------TTTEEEEEETTEEEEEE-TT-EEE
T ss_pred             EeeeceE-eccCCcccCCCc--------------cceeee-cCCCcceeeeCcEEEeecCCCCCCC
Confidence            9999998 344556655221              112111 2445566655555666666665444

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=81.00  E-value=1.1  Score=25.52  Aligned_cols=25  Identities=32%  Similarity=0.616  Sum_probs=18.4

Q ss_pred             CCCCCceecC-CCeeeecCCCccccC
Q psy11797         40 TCKFSCKNLI-GSYMCTCPPGYQQVT   64 (249)
Q Consensus        40 ~c~~~C~n~~-gsy~C~C~~G~~g~~   64 (249)
                      +-.+.|.+.. |++.|+|.+||+...
T Consensus         8 P~NA~C~~~~dG~eecrCllgyk~~~   33 (37)
T PF12946_consen    8 PANAGCFRYDDGSEECRCLLGYKKVG   33 (37)
T ss_dssp             -TTEEEEEETTSEEEEEE-TTEEEET
T ss_pred             CCCcccEEcCCCCEEEEeeCCccccC
Confidence            3347888776 899999999998644

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	249
1uzj_A	162	Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Hu		1e-10
1uzk_A	162	Integrin Binding Cbegf22-tb4-cbegf33 Fragment Of Hu		3e-10
3p5b_L	400	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		1e-07
3p5c_L	440	The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE		1e-07
3m0c_C	791	The X-Ray Crystal Structure Of Pcsk9 In Complex Wit		1e-07
1n7d_A	699	Extracellular Domain Of The Ldl Receptor Length = 6		1e-07
2w2n_E	107	Wt Pcsk9-Deltac Bound To Egf-A H306y Mutant Of Ldlr		2e-07
3gcw_E	83	Pcsk9:egfa(H306y) Length = 83		4e-07
1emn_A	82	Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epide		5e-07
1lmj_A	86	Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2		6e-07
2w2m_E	107	Wt Pcsk9-Deltac Bound To Wt Egf-A Of Ldlr Length =		7e-07
1z6c_A	87	Solution Structure Of An Egf Pair (Egf34) From Vita		8e-07
3bps_E	83	Pcsk9:egf-a Complex Length = 83		1e-06
1hz8_A	82	Solution Structure And Backbone Dynamics Of A Conca		1e-06
1hj7_A	80	Nmr Study Of A Pair Of Ldl Receptor Ca2+ Binding Ep		2e-06
2w86_A	147	Crystal Structure Of Fibrillin-1 Domains Cbegf9hyb2		7e-06
2w86_A	147	Crystal Structure Of Fibrillin-1 Domains Cbegf9hyb2		2e-05
2vj3_A	135	Human Notch-1 Egfs 11-13 Length = 135		2e-05
1toz_A	116	Nmr Structure Of The Human Notch-1 Ligand Binding R		5e-05
2bo2_A	143	Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune Syst		6e-05
3v65_B	386	Crystal Structure Of Agrin And Lrp4 Complex Length		9e-05
1apj_A	74	Nmr Study Of The Transforming Growth Factor Beta Bi		2e-04
1ksq_A	75	Nmr Study Of The Third Tb Domain From Latent Transf		4e-04

>pdb|1UZJ|A Chain A, Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Human Fibrillin-1, Holo Form. Length = 162

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 36/158 (22%)
Query: 88  VDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQ---FVEFRIILSM 144
            DVNEC L+  +C +G CVN  GSY C+C   F+L+     C+       +++ R     
Sbjct: 1   TDVNEC-LDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIR----- 54
Query: 145 PKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCP 204
           P+ +N     +N+                     + + V++  CCC++G AWG  C++CP
Sbjct: 55  PRGDNGDTACSNE---------------------IGVGVSKASCCCSLGKAWGTPCEMCP 93
Query: 205 TRGSQEYTDLC------LESGLTVDGRDIDECVTIPAV 236
              + EY  LC        + +TV   DIDEC  +P +
Sbjct: 94  AVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGL 131

>pdb|1UZK|A Chain A, Integrin Binding Cbegf22-tb4-cbegf33 Fragment Of Human Fibrillin-1, Ca Bound To Cbegf23 Domain Only Length = 162

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 36/158 (22%)
Query: 88  VDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQ---FVEFRIILSM 144
            DVNEC L+  +C +G CVN  GSY C+C   F+L+     C+       +++ R     
Sbjct: 1   TDVNEC-LDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIR----- 54
Query: 145 PKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCP 204
           P+ +N     +N+                     + + V++  CCC++G AWG  C+ CP
Sbjct: 55  PRGDNGDTACSNE---------------------IGVGVSKASCCCSLGKAWGTPCEXCP 93
Query: 205 TRGSQEYTDLC------LESGLTVDGRDIDECVTIPAV 236
              + EY  LC        + +TV   DIDEC  +P +
Sbjct: 94  AVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGL 131

>pdb|3P5B|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 400

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 21/104 (20%)
Query: 32  DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVN 91
           +EC      C   C +L   Y C CP G+Q V                       C D++
Sbjct: 1   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-------------------RRCEDID 41
Query: 92  ECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQF 135
           EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C   G  
Sbjct: 42  ECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVGSI 83

>pdb|3P5C|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE RECEPTOR IN AN Extended Conformation Length = 440

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 32  DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVN 91
           +EC      C   C +L   Y C CP G+Q V                       C D++
Sbjct: 41  NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-------------------RRCEDID 81
Query: 92  ECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFV 136
           EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C   G   
Sbjct: 82  ECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIA 124

>pdb|3M0C|C Chain C, The X-Ray Crystal Structure Of Pcsk9 In Complex With The Ldl Receptor Length = 791

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 31  VDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDV 90
            +EC      C   C +L   Y C CP G+Q V                       C D+
Sbjct: 312 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-------------------RRCEDI 352
Query: 91  NECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFV 136
           +EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C   G   
Sbjct: 353 DECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIA 396

>pdb|1N7D|A Chain A, Extracellular Domain Of The Ldl Receptor Length = 699

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 31  VDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDV 90
            +EC      C   C +L   Y C CP G+Q V                       C D+
Sbjct: 294 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-------------------RRCEDI 334
Query: 91  NECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFV 136
           +EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C   G   
Sbjct: 335 DECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIA 378

>pdb|2W2N|E Chain E, Wt Pcsk9-Deltac Bound To Egf-A H306y Mutant Of Ldlr Length = 107

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 21/104 (20%)
Query: 26  KNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSH 85
           +  +  +EC      C + C +L   Y C CP G+Q V                      
Sbjct: 24  QGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQ-------------------R 64
Query: 86  ECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
            C D++EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C
Sbjct: 65  RCEDIDECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKAC 106

>pdb|3GCW|E Chain E, Pcsk9:egfa(H306y) Length = 83

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 21/101 (20%)
Query: 29  IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECV 88
           +  +EC      C + C +L   Y C CP G+Q V                       C 
Sbjct: 3   MGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQ-------------------RRCE 43
Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           D++EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C
Sbjct: 44  DIDECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKAC 82

>pdb|1EMN|A Chain A, Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epidermal Growth Factor-Like Domains, Minimized Average Structure Length = 82

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 45/94 (47%), Gaps = 23/94 (24%)
Query: 29  IDVDECRTPANTCKFS-CKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHEC 87
           +D+DEC+ P + CK   C N  GSY C CP GY                        +EC
Sbjct: 3   VDMDECKEP-DVCKHGQCINTDGSYRCECPFGYILA--------------------GNEC 41
Query: 88  VDVNECELNLDSCANGRCVNLEGSYRCECERGFK 121
           VD +EC +  + C NG C N+ G + C CE GF+
Sbjct: 42  VDTDECSVG-NPCGNGTCKNVIGGFECTCEEGFE 74

>pdb|1LMJ|A Chain A, Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2+ Binding Epidermal Growth Factor-like Domains Length = 86

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 30  DVDECRTPANTC-KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECV 88
           D+DECR   + C +  C N  G + C C  GY+    S   +                C+
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYE----SGFMMMKN-------------CM 44
Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL 130
           D++EC+ +   C  G C N EGSYRCEC  G +LS +   C+
Sbjct: 45  DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86

>pdb|2W2M|E Chain E, Wt Pcsk9-Deltac Bound To Wt Egf-A Of Ldlr Length = 107

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 26  KNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSH 85
           +  +  +EC      C   C +L   Y C CP G+Q V                      
Sbjct: 24  QGAMGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-------------------R 64
Query: 86  ECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
            C D++EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C
Sbjct: 65  RCEDIDECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKAC 106

>pdb|1Z6C|A Chain A, Solution Structure Of An Egf Pair (Egf34) From Vitamin K- Dependent Protein S Length = 87

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 24/103 (23%)
Query: 30  DVDECRTPANTCKFS-CKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECV 88
           DVDEC    + C  + CKN+ G + C CP GY+                     KS  C 
Sbjct: 2   DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNL------------------KSKSCE 43
Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECE--RGFKLSLDGKQC 129
           D++EC  N+  CA   CVN  G Y C C+  +GFKL+ D K C
Sbjct: 44  DIDECSENM--CAQ-LCVNYPGGYTCYCDGKKGFKLAQDQKSC 83

>pdb|3BPS|E Chain E, Pcsk9:egf-a Complex Length = 83

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 21/101 (20%)
Query: 29  IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECV 88
           +  +EC      C   C +L   Y C CP G+Q V                       C 
Sbjct: 3   MGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-------------------RRCE 43
Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           D++EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C
Sbjct: 44  DIDECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKAC 82

>pdb|1HZ8|A Chain A, Solution Structure And Backbone Dynamics Of A Concatemer Of Egf-Homology Modules Of The Human Low Density Lipoprotein Receptor Length = 82

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 21/99 (21%)
Query: 31  VDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDV 90
            +EC      C   C +L   Y C CP G+Q V                       C D+
Sbjct: 2   TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-------------------RRCEDI 42
Query: 91  NECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           +EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C
Sbjct: 43  DECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKAC 79

>pdb|1HJ7|A Chain A, Nmr Study Of A Pair Of Ldl Receptor Ca2+ Binding Epidermal Growth Factor-Like Domains, 20 Structures Length = 80

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 21/99 (21%)
Query: 31  VDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDV 90
            +EC      C   C +L   Y C CP G+Q V                       C D+
Sbjct: 2   TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-------------------RRCEDI 42
Query: 91  NECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           +EC+ + D+C+   CVNLEG Y+C+CE GF+L    K C
Sbjct: 43  DECQ-DPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKAC 79

>pdb|2W86|A Chain A, Crystal Structure Of Fibrillin-1 Domains Cbegf9hyb2cbegf10, Calcium Saturated Form Length = 147

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 83  KSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL 130
           K  +C D++ECE+    C NG CVN  GS++C+C  G  L   G+ CL
Sbjct: 100 KGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147

>pdb|2W86|A Chain A, Crystal Structure Of Fibrillin-1 Domains Cbegf9hyb2cbegf10, Calcium Saturated Form Length = 147

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 40/152 (26%)
Query: 88  VDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKA 147
            D++ECE +   C NG C N  GS+ CEC     L      C+                 
Sbjct: 2   ADIDECESS--PCINGVCKNSPGSFICECSSESTLDPTKTICI----------------- 42
Query: 148 ENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRG 207
                       G C++++ +GRC +    A L    +  CC ++G AWG  C LC    
Sbjct: 43  --------ETIKGTCWQTVIDGRCEININGATL----KSQCCSSLGAAWGSPCTLC---- 86
Query: 208 SQEYTDLCLESGLTVDG---RDIDECVTIPAV 236
             +   +C +    + G    DIDEC   P V
Sbjct: 87  --QVDPICGKGYSRIKGTQCEDIDECEVFPGV 116

>pdb|2VJ3|A Chain A, Human Notch-1 Egfs 11-13 Length = 135

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 54/142 (38%), Gaps = 54/142 (38%)
Query: 9   SDVDECRTPANTCK-----------FSCKNL---------IDVDECRTPANTCKFSCKNL 48
            DVDEC   AN C+           F C+ L         IDV+EC +       +C + 
Sbjct: 3   QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQ 62
Query: 49  IGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA------N 102
           IG + C C PGY+ V                             CE+N D CA      N
Sbjct: 63  IGEFQCICMPGYEGV----------------------------HCEVNTDECASSPCLHN 94
Query: 103 GRCVNLEGSYRCECERGFKLSL 124
           GRC++    ++CEC  GF   L
Sbjct: 95  GRCLDKINEFQCECPTGFTGHL 116

>pdb|1TOZ|A Chain A, Nmr Structure Of The Human Notch-1 Ligand Binding Region Length = 116

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 54/141 (38%), Gaps = 54/141 (38%)
Query: 10  DVDECRTPANTCK-----------FSCKNL---------IDVDECRTPANTCKFSCKNLI 49
           DVDEC   AN C+           F C+ L         IDV+EC +       +C + I
Sbjct: 2   DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQI 61
Query: 50  GSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA------NG 103
           G + C C PGY+ V                             CE+N D CA      NG
Sbjct: 62  GEFQCICMPGYEGV----------------------------HCEVNTDECASSPCLHNG 93
Query: 104 RCVNLEGSYRCECERGFKLSL 124
           RC++    ++CEC  GF   L
Sbjct: 94  RCLDKINEFQCECPTGFTGHL 114

>pdb|2BO2|A Chain A, Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune System Molecule, In Complex With Calcium. Length = 143

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 50/110 (45%), Gaps = 21/110 (19%)
Query: 16  TPANTCKFSCKNLIDVDECRTPANTC--KFS-CKNLIGSYMCTCPPGYQQVTHSTVAIAT 72
           TP  TC        D++EC T +     KFS C N  GSY C C PGY+ V+      A 
Sbjct: 36  TPMETCD-------DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSG-----AK 83
Query: 73  TDTRTAESGGKSHECVDVNECELNLDSCANGR-CVNLEGSYRCECERGFK 121
           T    +E     + C DV+EC      C +   C N  GSY C C  G+K
Sbjct: 84  TFKNESE-----NTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWK 128

>pdb|3V65|B Chain B, Crystal Structure Of Agrin And Lrp4 Complex Length = 386

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 20/102 (19%)
Query: 32  DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVN 91
           + C      C   C+ + G+  CTC  GY+          T D RT         C DVN
Sbjct: 4   ENCNVNNGGCAQKCQMIRGAVQCTCHTGYR---------LTEDGRT---------CQDVN 45
Query: 92  ECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKG 133
           EC      C+ G C N EG+++C CE G++L  D + C   G
Sbjct: 46  ECAEE-GYCSQG-CTNSEGAFQCWCEAGYELRPDRRSCKALG 85

>pdb|1APJ|A Chain A, Nmr Study Of The Transforming Growth Factor Beta Binding Protein-Like Domain (Tb Module8-Cys Domain), Nmr, 21 Structures Length = 74

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 158 RLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM-GMAWGPQCQLCPTRGSQEYTDLC- 215
           R+ +CY     G+C  P         ++ +CCC + G  WG  C+LCPT   + +  +C 
Sbjct: 6   RMSYCYAKFEGGKCSSPKS----RNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICP 61
Query: 216 LESGLTVDGRD 226
             SG+ V   D
Sbjct: 62  YGSGIIVGPDD 72

>pdb|1KSQ|A Chain A, Nmr Study Of The Third Tb Domain From Latent Transforming Growth Factor-Beta Binding Protein-1 Length = 75

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 179 LLMEVTRMDCCCTMGMAWGPQCQL--CPTRGSQEYTDLC 215
           L   VT+ +CCCT G  WG  C++  CP  G+ E+T++C
Sbjct: 26  LAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMC 64

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	249
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	1e-23
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	3e-04
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	3e-19
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	9e-10
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	4e-09
2bou_A	143	EGF-like module containing mucin-like hormone rece	8e-19
2bou_A	143	EGF-like module containing mucin-like hormone rece	4e-11
2bou_A	143	EGF-like module containing mucin-like hormone rece	6e-07
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-18
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-15
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	3e-09
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	3e-18
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	2e-09
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	4e-09
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	3e-17
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	4e-10
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	9e-17
1apj_A	74	Fibrillin; microfibril, TB module, marfan syndrome	5e-13
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	5e-11
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	4e-05
1aut_L	114	Activated protein C; serine proteinase, plasma cal	2e-10
3v65_B	386	Low-density lipoprotein receptor-related protein;	8e-10
3v65_B	386	Low-density lipoprotein receptor-related protein;	2e-06
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	1e-08
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	7e-08
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	9e-08
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	1e-07
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	2e-06
1ksq_A	75	Latent transforming growth factor beta binding pro	2e-07
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	3e-07
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	5e-07
2vh0_B	134	Activated factor XA light chain; serine protease,	7e-07
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	1e-06
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	6e-06
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	1e-06
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	3e-04
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	1e-05
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	3e-04
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	6e-04

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 90.0 bits (224), Expect = 1e-23
 Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 18/102 (17%)

Query: 30  DVDECRTPANTCK-FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECV 88
           D+DECR   + C    C N  G + C C  GY+                         C+
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYES-----------------GFMMMKNCM 44

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL 130
           D++EC+ +   C  G C N EGSYRCEC  G +LS +   C+
Sbjct: 45  DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 19/54 (35%)

Query: 8  CSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQ 61
          C D+DEC+     C+                      C N  GSY C CPPG+Q
Sbjct: 43 CMDIDECQRDPLLCRGG-------------------VCHNTEGSYRCECPPGHQ 77

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 80.5 bits (199), Expect = 3e-19
 Identities = 28/127 (22%), Positives = 43/127 (33%), Gaps = 24/127 (18%)

Query: 8   CSDVDECRTPANTCKFSCKNLI----DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQV 63
           C +  +           C+  I       +C +      +     +      C  GY   
Sbjct: 41  CIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAA-WGSPCTLCQVDPICGKGYS-- 97

Query: 64  THSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLS 123
                              K  +C D++ECE+    C NG CVN  GS++C+C  G  L 
Sbjct: 98  -----------------RIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLD 140

Query: 124 LDGKQCL 130
             G+ CL
Sbjct: 141 ATGRICL 147

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 54.7 bits (132), Expect = 9e-10
 Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 10/106 (9%)

Query: 30  DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGG------K 83
           D+DEC +        CKN  GS++C C          T+ I T      ++         
Sbjct: 3   DIDECESS-PCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEIN 61

Query: 84  SHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
            +     ++C  +L +                C +G+     G QC
Sbjct: 62  INGATLKSQCCSSLGAAWG--SPCTLCQVDPICGKGYSRI-KGTQC 104

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 52.7 bits (127), Expect = 4e-09
 Identities = 39/149 (26%), Positives = 55/149 (36%), Gaps = 40/149 (26%)

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAE 148
           D++ECE +   C NG C N  GS+ CEC     L      C                   
Sbjct: 3   DIDECESS--PCINGVCKNSPGSFICECSSESTLDPTKTIC------------------- 41

Query: 149 NSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGS 208
                      G C++++ +GRC +    A      +  CC ++G AWG  C LC     
Sbjct: 42  ------IETIKGTCWQTVIDGRCEININGA----TLKSQCCSSLGAAWGSPCTLCQ---- 87

Query: 209 QEYTDLCLESGLTVDGR---DIDECVTIP 234
                +C +    + G    DIDEC   P
Sbjct: 88  --VDPICGKGYSRIKGTQCEDIDECEVFP 114

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 79.1 bits (195), Expect = 8e-19
 Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 14/105 (13%)

Query: 29  IDVDECRTPANTC---KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSH 85
            D++EC T +         C N  GSY C C PGY+ V+                    +
Sbjct: 42  DDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVS----------GAKTFKNESEN 91

Query: 86  ECVDVNECELNLDSC-ANGRCVNLEGSYRCECERGFKLSLDGKQC 129
            C DV+EC      C ++  C N  GSY C C  G+K        
Sbjct: 92  TCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNN 136

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 58.3 bits (141), Expect = 4e-11
 Identities = 23/104 (22%), Positives = 31/104 (29%), Gaps = 19/104 (18%)

Query: 30  DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVD 89
           D   C   A  C     + + +  C C PG+   +                      C D
Sbjct: 1   DSRGC---ARWCP-QDSSCVNATACRCNPGFSSFSEII-------------TTPMETCDD 43

Query: 90  VNECELNLDSC--ANGRCVNLEGSYRCECERGFKLSLDGKQCLG 131
           +NEC             C N EGSY C C  G++     K    
Sbjct: 44  INECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKN 87

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 46.7 bits (111), Expect = 6e-07
 Identities = 25/121 (20%), Positives = 33/121 (27%), Gaps = 52/121 (42%)

Query: 8   CSDVDECRTPANTC---KFSCKNLI-----------------------------DVDECR 35
           C D++EC T +         C N                               DVDEC 
Sbjct: 41  CDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECS 100

Query: 36  TPANTCKFS--CKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNEC 93
           +  + C  S  C N +GSY C C PG++                               C
Sbjct: 101 SGQHQCDSSTVCFNTVGSYSCRCRPGWK------------------PRHGIPNNQKDTVC 142

Query: 94  E 94
           E
Sbjct: 143 E 143

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 78.6 bits (194), Expect = 2e-18
 Identities = 22/139 (15%), Positives = 41/139 (29%), Gaps = 35/139 (25%)

Query: 8   CSDVDECRTPANTC------KFSCKNLI-----------DVDECRTPANTCKFSCKNLIG 50
           C D        +          +C N I            + +          +      
Sbjct: 41  CVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEY 100

Query: 51  SYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEG 110
             +C    G++                      +    D++EC+     C  G+C+N  G
Sbjct: 101 KILCPGGEGFR------------------PNPITVILEDIDECQELPGLCQGGKCINTFG 142

Query: 111 SYRCECERGFKLSLDGKQC 129
           S++C C  G+ L+ D + C
Sbjct: 143 SFQCRCPTGYYLNEDTRVC 161

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 70.5 bits (173), Expect = 2e-15
 Identities = 24/100 (24%), Positives = 31/100 (31%), Gaps = 22/100 (22%)

Query: 30  DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVD 89
           DV+EC  P      +C N  GSY+C CPP ++                         CVD
Sbjct: 2   DVNECLDPTTCISGNCVNTPGSYICDCPPDFE------------------LNPTRVGCVD 43

Query: 90  VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
                       + R     G   C  E G  +S     C
Sbjct: 44  TRSGN----CYLDIRPRGDNGDTACSNEIGVGVSKASCCC 79

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 42/152 (27%), Positives = 59/152 (38%), Gaps = 30/152 (19%)

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAE 148
           DVNEC     +C +G CVN  GSY C+C   F+L+     C                   
Sbjct: 2   DVNECLDP-TTCISGNCVNTPGSYICDCPPDFELNPTRVGC------------------- 41

Query: 149 NSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGS 208
               + N            +  C    G  +    ++  CCC++G AWG  C++CP   +
Sbjct: 42  VDTRSGNCYLDIRPRGDNGDTACSNEIGVGV----SKASCCCSLGKAWGTPCEMCPAVNT 97

Query: 209 QEYTDLCL-ESGLTVDG-----RDIDECVTIP 234
            EY  LC    G   +       DIDEC  +P
Sbjct: 98  SEYKILCPGGEGFRPNPITVILEDIDECQELP 129

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 75.7 bits (187), Expect = 3e-18
 Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 22/101 (21%)

Query: 29  IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECV 88
           +D+DEC+ P       C N  GSY C CP GY                        +ECV
Sbjct: 3   VDMDECKEPDVCKHGQCINTDGSYRCECPFGYI--------------------LAGNECV 42

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           D +EC +  + C NG C N+ G + C CE GF+       C
Sbjct: 43  DTDECSVG-NPCGNGTCKNVIGGFECTCEEGFEPG-PMMTC 81

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 19/73 (26%)

Query: 8  CSDVDECRTPANTCKFSCKNLI-------------------DVDECRTPANTCKFSCKNL 48
            D+DEC+ P       C N                     D DEC         +CKN+
Sbjct: 2  AVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNV 61

Query: 49 IGSYMCTCPPGYQ 61
          IG + CTC  G++
Sbjct: 62 IGGFECTCEEGFE 74

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 87  CVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
            VD++EC+   D C +G+C+N +GSYRCEC  G+   L G +C
Sbjct: 2   AVDMDECKEP-DVCKHGQCINTDGSYRCECPFGY--ILAGNEC 41

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 73.9 bits (182), Expect = 3e-17
 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 21/107 (19%)

Query: 23  FSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGG 82
              +  +  +EC      C + C +L   Y C CP G+Q V                   
Sbjct: 21  LYFQGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRR--------------- 65

Query: 83  KSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
               C D++EC+   D+C+   CVNLEG Y+C+CE GF+L    K C
Sbjct: 66  ----CEDIDECQDP-DTCS-QLCVNLEGGYKCQCEEGFQLDPHTKAC 106

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 54.6 bits (132), Expect = 4e-10
 Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 23/83 (27%)

Query: 45  CKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGR 104
             + +  Y                                   +  NEC  N   C +  
Sbjct: 6   HHHPMSDYDIPTTENLY----------------------FQGAMGTNECLDNNGGC-SYV 42

Query: 105 CVNLEGSYRCECERGFKLSLDGK 127
           C +L+  Y C C  GF+L    +
Sbjct: 43  CNDLKIGYECLCPDGFQLVAQRR 65

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 71.9 bits (177), Expect = 9e-17
 Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 24/103 (23%)

Query: 30  DVDECRTPANTCKF-SCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECV 88
           DVDEC    + C    CKN+ G + C CP GY+             +++         C 
Sbjct: 2   DVDECSLKPSICGTAVCKNIPGDFECECPEGYR---------YNLKSKS---------CE 43

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECE--RGFKLSLDGKQC 129
           D++EC  N+  CA   CVN  G Y C C+  +GFKL+ D K C
Sbjct: 44  DIDECSENM--CA-QLCVNYPGGYTCYCDGKKGFKLAQDQKSC 83

>1apj_A Fibrillin; microfibril, TB module, marfan syndrome, connective tissue, novel fold, extracellular matrix; NMR {Homo sapiens} SCOP: g.23.1.1 Length = 74

 Score = 61.4 bits (149), Expect = 5e-13
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 157 QRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM-GMAWGPQCQLCPTRGSQEYTDLC 215
            R+ +CY     G+C  P         ++ +CCC + G  WG  C+LCPT   + +  +C
Sbjct: 5   LRMSYCYAKFEGGKCSSP----KSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQIC 60

Query: 216 LE-SGLTVDGRD 226
              SG+ V   D
Sbjct: 61  PYGSGIIVGPDD 72

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 57.4 bits (139), Expect = 5e-11
 Identities = 28/140 (20%), Positives = 39/140 (27%), Gaps = 44/140 (31%)

Query: 10  DVDECRTPANTCKFSCKNL-------------------IDVDECRTPANTCKFSCKNLIG 50
            VD C      C++ C+ L                       +       C   C +   
Sbjct: 3   PVDPCFR--ANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADC-DPNT 59

Query: 51  SYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEG 110
              C CP GY                          C D++ECE       +G C NL G
Sbjct: 60  QASCECPEGYI-------------------LDDGFICTDIDECENG--GFCSGVCHNLPG 98

Query: 111 SYRCECERGFKLSL-DGKQC 129
           ++ C C     L+   G  C
Sbjct: 99  TFECICGPDSALAGQIGTDC 118

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 16/69 (23%), Positives = 19/69 (27%), Gaps = 16/69 (23%)

Query: 8   CSDVDECRTPANTCK----FSC-----------KNLIDVDECRTPANTCKFSCKNLIGSY 52
           C            C      SC               D+DEC      C   C NL G++
Sbjct: 42  CQMFCNQTACPADCDPNTQASCECPEGYILDDGFICTDIDECENG-GFCSGVCHNLPGTF 100

Query: 53  MCTCPPGYQ 61
            C C P   
Sbjct: 101 ECICGPDSA 109

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 26/109 (23%), Positives = 36/109 (33%), Gaps = 28/109 (25%)

Query: 29  IDVDECRTPANTCKFS--------CKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAES 80
           +D D+C         +        C + IGS+ C C  G++                   
Sbjct: 4   VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWE------------------- 44

Query: 81  GGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           G      V    C L+   C    C+   G  RC C  G+KL  D  QC
Sbjct: 45  GRFCQREVSFLNCSLDNGGC-THYCLEEVGWRRCSCAPGYKLGDDLLQC 92

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 57.1 bits (137), Expect = 8e-10
 Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 20/106 (18%)

Query: 30  DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVD 89
             + C      C   C+ + G+  CTC  GY+                         C D
Sbjct: 2   GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLT------------------EDGRTCQD 43

Query: 90  VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQF 135
           VNEC      C+ G C N EG+++C CE G++L  D + C   G  
Sbjct: 44  VNECAEE-GYCSQG-CTNSEGAFQCWCEAGYELRPDRRSCKALGPE 87

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 47.5 bits (112), Expect = 2e-06
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVE 137
               C +N   CA  +C  + G+ +C C  G++L+ DG+ C    +  E
Sbjct: 2   GEENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAE 49

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 53.7 bits (128), Expect = 1e-08
 Identities = 39/185 (21%), Positives = 65/185 (35%), Gaps = 23/185 (12%)

Query: 32  DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVN 91
           +EC      C   C +L   Y C CP G+Q V                       C D++
Sbjct: 1   NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRR-------------------CEDID 41

Query: 92  ECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSV 151
           EC+   D+C+   CVNLEG Y+C+CE GF+L    K C   G              + ++
Sbjct: 42  ECQDP-DTCS-QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTL 99

Query: 152 NNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTR--MDCCCTMGMAWGPQCQLCPTRGSQ 209
           + +    L    R++      + +      ++++  +                  +R  Q
Sbjct: 100 DRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159

Query: 210 EYTDL 214
               L
Sbjct: 160 APDGL 164

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 50.1 bits (120), Expect = 7e-08
 Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 28/124 (22%)

Query: 8   CSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKF--SCKNLIGSYMCTCPPGYQQVTH 65
             +V E     N          D D+C T  + C+    CK+ +G Y CTC  G++    
Sbjct: 22  AREVFEDSDKTNEFWNKY---KDGDQCET--SPCQNQGKCKDGLGEYTCTCLEGFE---- 72

Query: 66  STVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLD 125
                           GK+ E      C L+   C +  C   + S  C C RG+ L+ +
Sbjct: 73  ----------------GKNCELFTRKLCSLDNGDC-DQFCHEEQNSVVCSCARGYTLADN 115

Query: 126 GKQC 129
           GK C
Sbjct: 116 GKAC 119

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 48.8 bits (117), Expect = 9e-08
 Identities = 39/136 (28%), Positives = 55/136 (40%), Gaps = 48/136 (35%)

Query: 8   CSDVDECRTPANTCK--FSCKNL------------------IDVDECRTPANTCK--FSC 45
             DVDEC   AN C+    C N                   IDV+EC +  N C+   +C
Sbjct: 2   AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVS--NPCQNDATC 59

Query: 46  KNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCAN-GR 104
            + IG + C C PGY+                    G   E V+ +EC  +   C + GR
Sbjct: 60  LDQIGEFQCICMPGYE--------------------GVHCE-VNTDECASS--PCLHNGR 96

Query: 105 CVNLEGSYRCECERGF 120
           C++    ++CEC  GF
Sbjct: 97  CLDKINEFQCECPTGF 112

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 51.2 bits (122), Expect = 1e-07
 Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 28/121 (23%)

Query: 6   FICSDVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMC-TCPPGYQQVT 64
             C D+DEC    + C                + +    C N    + C  CPP Y+   
Sbjct: 39  THCEDLDECALVPDICF---------------STSKVPRCVNTQPGFHCLPCPPRYR--- 80

Query: 65  HSTVAIATTDTRTAESGGKSHECVDVNECELNLDSC-ANGRCVNL----EGSYRCECERG 119
                          +  +   C   N C+    +C  +  C+ L    +  Y+CEC+ G
Sbjct: 81  ----GNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTG 136

Query: 120 F 120
           +
Sbjct: 137 Y 137

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 26/100 (26%), Positives = 35/100 (35%), Gaps = 31/100 (31%)

Query: 30  DVDECRTPANTC--KFSCKNL-IGSYMCT-CPPGYQQVTHSTVAIATTDTRTAESGGKSH 85
           D D C +  N C     C +   GS+ C  CP G+                     G   
Sbjct: 2   DPDGCLS--NPCFPGAQCSSFPDGSWSCGFCPVGFL--------------------GNGT 39

Query: 86  ECVDVNECELNLDSC----ANGRCVNLEGSYRCE-CERGF 120
            C D++EC L  D C       RCVN +  + C  C   +
Sbjct: 40  HCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRY 79

>1ksq_A Latent transforming growth factor beta binding protein 1; structure, LTBP-1, TGF-beta, TB domain, latency associated propeptide, LAP; NMR {Homo sapiens} SCOP: g.23.1.1 Length = 75

 Score = 46.5 bits (110), Expect = 2e-07
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 7/59 (11%)

Query: 160 GFCYRSLT-NGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQL--CPTRGSQEYTDLC 215
             CY +L     C     P     VT+ +CCCT G  WG  C++  CP  G+ E+T++C
Sbjct: 10  KECYYNLNDASLCDNVLAPN----VTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMC 64

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} Length = 317

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 21/92 (22%)

Query: 44  SCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANG 103
           SC++ I  Y CTC PGY+                    G + E    NEC          
Sbjct: 18  SCQDSIWGYTCTCSPGYE--------------------GSNCEL-AKNECHPERTDGCQH 56

Query: 104 RCVNLEGSYRCECERGFKLSLDGKQCLGKGQF 135
            C+  + SY C C +G++L  D KQC+   Q 
Sbjct: 57  FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQC 88

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* Length = 146

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 24/101 (23%), Positives = 35/101 (34%), Gaps = 22/101 (21%)

Query: 29  IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECV 88
           +D D+C          CK+ I SY C C  G++                    GK+ E +
Sbjct: 46  VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFE--------------------GKNCE-L 84

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           D      N   C        +    C C  G++L+ D K C
Sbjct: 85  DATCNIKN-GRCKQFCKTGADSKVLCSCTTGYRLAPDQKSC 124

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 25/103 (24%)

Query: 29  IDVDECRTPANTCKF--SCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHE 86
            D D+C T  + C+    CK+ +G Y CTC  G++                    GK+ E
Sbjct: 40  KDGDQCET--SPCQNQGKCKDGLGEYTCTCLEGFE--------------------GKNCE 77

Query: 87  CVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
                 C L+   C +  C   + S  C C RG+ L+ +GK C
Sbjct: 78  LFTRKLCSLDNGDC-DQFCHEEQNSVVCSCARGYTLADNGKAC 119

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 43.6 bits (103), Expect = 1e-06
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 7/49 (14%)

Query: 88  VDVNECELNLDSCANG-------RCVNLEGSYRCECERGFKLSLDGKQC 129
           VD++EC     S            C N  G Y C C  G++L  D   C
Sbjct: 2   VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 41.7 bits (98), Expect = 6e-06
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 8/41 (19%)

Query: 29 IDVDECRTPAN--------TCKFSCKNLIGSYMCTCPPGYQ 61
          +D+DEC + +          C+  C N +G Y C+C PGY+
Sbjct: 2  VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE 42

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 46.6 bits (109), Expect = 1e-06
 Identities = 27/133 (20%), Positives = 34/133 (25%), Gaps = 26/133 (19%)

Query: 25  CKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKS 84
           C        C       +      +  Y C C  GY     + V          ESG   
Sbjct: 47  CXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECI 106

Query: 85  HECVD-------------------------VNECELNLDSCA-NGRCVNLEGSYRCECER 118
            E +                            E    L     N  C N+EG Y C+C  
Sbjct: 107 VEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCME 166

Query: 119 GFKLSLDGKQCLG 131
           GF    +   CLG
Sbjct: 167 GFTFDXEXNVCLG 179

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 39.6 bits (91), Expect = 3e-04
 Identities = 15/110 (13%), Positives = 23/110 (20%), Gaps = 29/110 (26%)

Query: 30  DVDECRTPANTCKF--SCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHEC 87
           + +      +T         +   + C C  G                         + C
Sbjct: 1   EAEASAVTVDTICXNGQLVQMSNHFXCMCNEGLV-------------------HLSENTC 41

Query: 88  VDVNECELNLDS--------CANGRCVNLEGSYRCECERGFKLSLDGKQC 129
            + NEC              C           Y C C  G+ L  D    
Sbjct: 42  EEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVL 91

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... Length = 142

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 32/108 (29%)

Query: 29  IDVDECRTPANTCKF--SCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHE 86
            D D+C +  + C+   SCK+ + SY+C C P ++                    G++ E
Sbjct: 45  SDGDQCAS--SPCQNGGSCKDQLQSYICFCLPAFE--------------------GRNCE 82

Query: 87  CVDVNECELNLDSCANG----RCVNLEGS-YRCECERGFKLSLDGKQC 129
               ++  +      NG     C +  G+   C C  G+ L  DG  C
Sbjct: 83  -THKDDQLIC--VNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSC 127

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 28/87 (32%)

Query: 44  SCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANG 103
              +    Y+C CP G+                     G   +  ++NECE+    C NG
Sbjct: 72  YRGDTFIGYVCKCPRGFN--------------------GIHCQ-HNINECEVE--PCKNG 108

Query: 104 -RCVNLEGSYRCECERGFKLSLDGKQC 129
             C +L  +Y CEC   F     G+ C
Sbjct: 109 GICTDLVANYSCECPGEF----MGRNC 131

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Length = 285

 Score = 39.4 bits (91), Expect = 6e-04
 Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 88  VDVNECELNLDSC-ANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           +    C  N   C  +  C +    + C C   +  + +G+QC
Sbjct: 3   LAQQTCANNRHQCSVHAECRDYATGFCCRCVANY--TGNGRQC 43

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	249
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.74
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.74
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.69
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.67
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.66
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.66
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.59
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.59
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.57
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.56
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.56
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.55
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.55
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.55
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.52
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.51
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.5
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	99.49
1aut_L	114	Activated protein C; serine proteinase, plasma cal	99.46
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.46
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.44
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.43
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.41
2vh0_B	134	Activated factor XA light chain; serine protease,	99.4
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.39
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.37
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.31
3v65_B	386	Low-density lipoprotein receptor-related protein;	99.3
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	99.3
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	99.27
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	99.26
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	99.23
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	99.13
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	99.12
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	99.1
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	99.04
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	99.03
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.0
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.99
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.98
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.82
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.81
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.81
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.77
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.73
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.72
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.72
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.7
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.68
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.65
2vh0_B	134	Activated factor XA light chain; serine protease,	98.64
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.6
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	98.6
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.59
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.59
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.57
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	98.55
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	98.49
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.49
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.42
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.37
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.36
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	98.31
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.3
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.28
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.22
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.14
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	98.14
1apj_A	74	Fibrillin; microfibril, TB module, marfan syndrome	98.13
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.12
2wph_E	59	Coagulation factor IXA light chain; serine proteas	98.1
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.02
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.0
2wph_E	59	Coagulation factor IXA light chain; serine proteas	97.99
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	97.99
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.89
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.89
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.86
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.8
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.8
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.78
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.68
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.6
1ksq_A	75	Latent transforming growth factor beta binding pro	97.54
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.51
1szb_A	170	Mannose binding lectin-associated serine protease-	97.5
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.43
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.4
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	97.22
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.18
1szb_A	170	Mannose binding lectin-associated serine protease-	97.03
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.97
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	96.84
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	96.83
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	96.71
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.7
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.7
1ob1_C	99	Major merozoite surface protein; immune system, im	96.68
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.67
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.64
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.64
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	96.59
1nzi_A	159	Complement C1S component; calcium, innate immunity	96.57
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	96.34
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.18
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	95.96
1nzi_A	159	Complement C1S component; calcium, innate immunity	95.93
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	95.92
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	95.9
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	95.88
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	95.71
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	95.54
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	95.48
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	95.43
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	95.4
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	95.19
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	95.0
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	94.87
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	94.59
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	94.51
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	94.26
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	93.77
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	93.58
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	93.55
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	93.52
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	93.47
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	92.76
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	92.46
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	92.38
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	92.25
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	92.11
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	91.87
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	91.67
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	91.62
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	91.41
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	91.29
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	90.09
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	90.06
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	89.47
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	88.92
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	88.41
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	88.02
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	87.98
1ob1_C	99	Major merozoite surface protein; immune system, im	87.82
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	86.84
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	86.58
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	85.66
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	82.54
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	82.17

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.74  E-value=6e-18  Score=127.20  Aligned_cols=117  Identities=31%  Similarity=0.674  Sum_probs=89.4

Q ss_pred             CCCccCCCCCCC--CCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeee
Q psy11797         30 DVDECRTPANTC--KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCV  106 (249)
Q Consensus        30 did~C~~~~~~c--~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~  106 (249)
                      |||+|+.....|  .++|+++.++|+|.|++||+|..++                     .++++|..  .+|. ++.|+
T Consensus         4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~---------------------~~~~~C~~--~~C~~~~~C~   60 (135)
T 2vj3_A            4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE---------------------IDVNECVS--NPCQNDATCL   60 (135)
T ss_dssp             CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSC---------------------EECCTTTT--CCCCSSCEEE
T ss_pred             ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccc---------------------ccCccCCC--CCCCCCCEEe
Confidence            556666433334  3678888899999999999997655                     58899985  7898 56999


Q ss_pred             eCCCcceeecCCCceeCCCCCCcc-cCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCccC-CCC
Q psy11797        107 NLEGSYRCECERGFKLSLDGKQCL-GKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLM-EVT  184 (249)
Q Consensus       107 ~~~g~~~C~C~~G~~~~~~g~~C~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~-~~~  184 (249)
                      ++.++|+|.|++||.    +..|+ ++++                |...+|.+.++|.+..++|+|.|++||++.. ...
T Consensus        61 ~~~g~~~C~C~~G~~----G~~C~~~~~~----------------C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~  120 (135)
T 2vj3_A           61 DQIGEFQCICMPGYE----GVHCEVNTDE----------------CASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVD  120 (135)
T ss_dssp             ECSSCEEEECCTTEE----SSSSCEECCT----------------TTTCCSTTTCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred             CCCCCceeeCCCCCc----CCcceecCCc----------------ccCCCcCCCCEeECCCCCeEEECCCCCcCCccCcc
Confidence            999999999999999    88886 4443                3445678889999999999999999998775 245


Q ss_pred             cceee
Q psy11797        185 RMDCC  189 (249)
Q Consensus       185 ~~~C~  189 (249)
                      +++|.
T Consensus       121 i~~C~  125 (135)
T 2vj3_A          121 LHHIL  125 (135)
T ss_dssp             CC---
T ss_pred             Ccccc
Confidence            55654

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.74  E-value=2.4e-19  Score=139.06  Aligned_cols=136  Identities=30%  Similarity=0.666  Sum_probs=98.4

Q ss_pred             ecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCC--ccceeeeecCCcccccccCCCCCcccccccc
Q psy11797         88 VDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQ--FVEFRIILSMPKAENSVNNNNNQRLGFCYRS  165 (249)
Q Consensus        88 ~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~  165 (249)
                      +|||||+. +++|.++.|+|+.++|+|.|++||.+..++++|+++++  |......         +   .....+.|.+.
T Consensus         1 ~dideC~~-~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~---------c---~~~~~~~C~~~   67 (162)
T 1uzk_A            1 TDVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRP---------R---GDNGDTACSNE   67 (162)
T ss_dssp             CCCCGGGS-TTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------------------CEEE
T ss_pred             CccccCCC-CCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcc---------c---CCCCCCcccCC
Confidence            37899985 47898779999999999999999999888999998665  3211000         0   00124455544


Q ss_pred             CCCCcccCCCCCCccCCCCcceeecCCCCccCCCCccCCCCCCchhhccCCC-CCccCCC-----CCCcccccCCCCCCC
Q psy11797        166 LTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLE-SGLTVDG-----RDIDECVTIPAVESS  239 (249)
Q Consensus       166 ~~~~~C~c~~g~~~~~~~~~~~C~C~~g~~~g~~C~~C~~~~~~~~~c~Cp~-~G~~~~~-----~dideC~~~~~~C~n  239 (249)
                      .+.             ..+.++|.|..||.|+..|+.|+....++|+|+||. .||+++.     +|||||+..++.|+|
T Consensus        68 ~~~-------------~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~  134 (162)
T 1uzk_A           68 IGV-------------GVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG  134 (162)
T ss_dssp             EEE-------------EECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT
T ss_pred             cCC-------------cccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC
Confidence            320             023456666667667888988877788899999953 4999863     599999998888999


Q ss_pred             CcccccccCC
Q psy11797        240 KLAKMFLRAY  249 (249)
Q Consensus       240 g~c~~~~~~y  249 (249)
                      +.|+|+.++|
T Consensus       135 g~C~n~~gsy  144 (162)
T 1uzk_A          135 GKCINTFGSF  144 (162)
T ss_dssp             SEEEECSSCE
T ss_pred             CEeEcCCCCE
Confidence            9999999987

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.69  E-value=1.1e-16  Score=120.22  Aligned_cols=104  Identities=35%  Similarity=0.792  Sum_probs=84.6

Q ss_pred             CCccCcccC--CCCCCCCcceeeC------------------CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797          7 ICSDVDECR--TPANTCKFSCKNL------------------IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus         7 ~C~di~eC~--~~~~~c~~~C~~~------------------~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +|+|||||+  ..||..+++|+++                  +++++|...++...++|+++.++|+|.|++||+|..++
T Consensus         1 Sc~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~   80 (135)
T 2vj3_A            1 SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCE   80 (135)
T ss_dssp             --CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcce
Confidence            478999999  5778777899887                  36899998777777999999999999999999986655


Q ss_pred             cccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCcc-cCCCccc
Q psy11797         67 TVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCL-GKGQFVE  137 (249)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~-~~~~~~~  137 (249)
                                           .++++|..  .+|. ++.|+++.++|+|.|++||.    |..|+ ++++|..
T Consensus        81 ---------------------~~~~~C~~--~~C~~~g~C~~~~g~~~C~C~~G~~----G~~C~~~i~~C~~  126 (135)
T 2vj3_A           81 ---------------------VNTDECAS--SPCLHNGRCLDKINEFQCECPTGFT----GHLCQVDLHHILD  126 (135)
T ss_dssp             ---------------------EECCTTTT--CCSTTTCEEEECSSCEEEECCTTEE----SSSSCEECC----
T ss_pred             ---------------------ecCCcccC--CCcCCCCEeECCCCCeEEECCCCCc----CCccCccCccccC
Confidence                                 57899984  6898 57999999999999999999    88995 6666653

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.67  E-value=2e-16  Score=145.06  Aligned_cols=117  Identities=25%  Similarity=0.489  Sum_probs=88.2

Q ss_pred             CCCccCCCCCCCCCCceecCC-Ceee-ecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CC---
Q psy11797         30 DVDECRTPANTCKFSCKNLIG-SYMC-TCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NG---  103 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~g-sy~C-~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g---  103 (249)
                      +|++|..+++..+++|+++.+ +|+| .|++||+|..                    ..|++|+||...++.|. ++   
T Consensus         2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg--------------------~~CeDiDEC~~~p~~C~~gg~~~   61 (634)
T 1yo8_A            2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNG--------------------THCEDLDECALVPDICFSTSKVP   61 (634)
T ss_dssp             --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCS--------------------SSCCBCCTTTTSCCCSCCCSSSC
T ss_pred             cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCC--------------------CCccccccccCCCCcccCCcccc
Confidence            567776655555578888775 5999 9999999754                    56889999997566698 55   


Q ss_pred             eeeeCCCcceee-cCCCceeCC-----------CCCCcccCCCccceeeeecCCcccccccCCCCCccccccccC----C
Q psy11797        104 RCVNLEGSYRCE-CERGFKLSL-----------DGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSL----T  167 (249)
Q Consensus       104 ~C~~~~g~~~C~-C~~G~~~~~-----------~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~----~  167 (249)
                      .|+++.++|+|. |++||....           .++.|+++++|..              ...+|..++.|.+..    +
T Consensus        62 ~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~--------------~~~pC~~~~~Cvnt~~~~~G  127 (634)
T 1yo8_A           62 RCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKD--------------KTHNCHKHAECIYLGHFSDP  127 (634)
T ss_dssp             CEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTT--------------TCCCCCTTEEEEECCTTCSS
T ss_pred             ceeeccCceecccCCCCcccCccccccccccccCCCcccccccccC--------------CCcccccCcccccccccccc
Confidence            799999999998 999998432           2345666665532              124577889999988    8


Q ss_pred             CCcccCCCCCCcc
Q psy11797        168 NGRCVLPTGPALL  180 (249)
Q Consensus       168 ~~~C~c~~g~~~~  180 (249)
                      +|+|.|+.||++.
T Consensus       128 sY~C~C~~Gy~Gd  140 (634)
T 1yo8_A          128 MYKCECQTGYAGD  140 (634)
T ss_dssp             SEEEEECTTEEES
T ss_pred             ceeeeccCCcccc
Confidence            8999999999763

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.66  E-value=1.3e-16  Score=110.41  Aligned_cols=84  Identities=39%  Similarity=0.867  Sum_probs=69.7

Q ss_pred             CCCCccCCCCCCCC-CCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeee
Q psy11797         29 IDVDECRTPANTCK-FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVN  107 (249)
Q Consensus        29 ~did~C~~~~~~c~-~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~  107 (249)
                      +|||||+..++.|. ++|+++.++|+|.|++||++....                 +..|++|+||...+..|.++.|+|
T Consensus         1 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~-----------------g~~C~dideC~~~~~~C~~~~C~n   63 (86)
T 1lmj_A            1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMM-----------------MKNCMDIDECQRDPLLCRGGVCHN   63 (86)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTT-----------------SSSEEECCHHHHCSSTTTTSEEEE
T ss_pred             CccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCC-----------------CCccCCcccccCCCCcCCCCEeEc
Confidence            37888888776675 689999999999999999865321                 267899999997556687679999


Q ss_pred             CCCcceeecCCCceeCCCCCCc
Q psy11797        108 LEGSYRCECERGFKLSLDGKQC  129 (249)
Q Consensus       108 ~~g~~~C~C~~G~~~~~~g~~C  129 (249)
                      +.++|+|.|++||.+..++++|
T Consensus        64 ~~g~y~C~C~~G~~~~~~~~~C   85 (86)
T 1lmj_A           64 TEGSYRCECPPGHQLSPNISAC   85 (86)
T ss_dssp             ETTEEEEESCTTSCCCSSSCCC
T ss_pred             CCCCEEEECcCCcccCCCCCcc
Confidence            9999999999999987777766

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.66  E-value=7.7e-18  Score=133.43  Aligned_cols=137  Identities=20%  Similarity=0.455  Sum_probs=99.9

Q ss_pred             CCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccC--CCCCC-CCeeeeCC-----Cccee
Q psy11797         43 FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELN--LDSCA-NGRCVNLE-----GSYRC  114 (249)
Q Consensus        43 ~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~--~~~C~-~g~C~~~~-----g~~~C  114 (249)
                      ++|+++.++|+|.|++||+|.. .                  ..|+++++|...  ..+|. ++.|+++.     ++|+|
T Consensus        16 g~C~~~~g~~~C~C~~G~~g~~-~------------------~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C   76 (186)
T 1z1y_A           16 GQLVQMSNHFXCMCNEGLVHLS-E------------------NTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXC   76 (186)
T ss_dssp             EEEEECSSCEEEEECTTEEEEE-T------------------TEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEE
T ss_pred             CEeECCCCCeEeECCCCCccCC-C------------------CccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEEC
Confidence            5899999999999999999862 2                  478999999854  47898 56999999     89999


Q ss_pred             ecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCcccccc----ccCCCCcccCCCCCCccC-----CCCc
Q psy11797        115 ECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCY----RSLTNGRCVLPTGPALLM-----EVTR  185 (249)
Q Consensus       115 ~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~----~~~~~~~C~c~~g~~~~~-----~~~~  185 (249)
                      .|++||.+..  ..|. +                +.|...+|.+++.|.    +..++|+|.|+.||++..     ....
T Consensus        77 ~C~~G~~g~~--~~C~-~----------------d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~  137 (186)
T 1z1y_A           77 GCIEGYTLXE--DTCV-L----------------DVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT  137 (186)
T ss_dssp             EECTTEEEET--TEEE-E----------------GGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE
T ss_pred             CCCCCCccCC--CCCC-C----------------CcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc
Confidence            9999998432  1343 2                334455678889998    777899999999998731     1111


Q ss_pred             --ceeecCCCC-ccCCCCccCCCCCCchhhccCCCCCccCCC
Q psy11797        186 --MDCCCTMGM-AWGPQCQLCPTRGSQEYTDLCLESGLTVDG  224 (249)
Q Consensus       186 --~~C~C~~g~-~~g~~C~~C~~~~~~~~~c~Cp~~G~~~~~  224 (249)
                        ++|.  ... ..++.|    +...++|+|.| .+||+|+.
T Consensus       138 ~~~~C~--~~C~~~~~~C----~n~~g~y~C~C-~~G~~g~~  172 (186)
T 1z1y_A          138 GETACQ--LXCNTDNEVC----XNVEGVYXCQC-MEGFTFDX  172 (186)
T ss_dssp             ECCCCC--CCCCTTTEEE----EEETTEEEEEE-CTTCEEET
T ss_pred             CCCccc--ccccccCcce----ecCCCCeeeEC-CCCCccCc
Confidence              3342  222 123444    44567799999 79999864

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.59  E-value=4.6e-16  Score=120.48  Aligned_cols=118  Identities=28%  Similarity=0.475  Sum_probs=78.8

Q ss_pred             CCCCccCC-CCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcc--cccCCCCCC---C
Q psy11797         29 IDVDECRT-PANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNE--CELNLDSCA---N  102 (249)
Q Consensus        29 ~did~C~~-~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~--C~~~~~~C~---~  102 (249)
                      +|||||+. .++. .++|+|++++|+|.|++||++....                  ..|+++++  |.....+|.   +
T Consensus         1 ~dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g------------------~~C~d~~~~~C~~~~~~c~~~~~   61 (162)
T 1uzk_A            1 TDVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTR------------------VGCVDTRSGNCYLDIRPRGDNGD   61 (162)
T ss_dssp             CCCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTS------------------SBEECCCCEEEEEEC--------
T ss_pred             CccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCC------------------CcccCCCCCcccCCCcccCCCCC
Confidence            46788874 3332 4899999999999999999976544                  67888887  876444442   4


Q ss_pred             CeeeeCCC----cceeecCCCceeC---------------------------CCCCCcccCCCccceeeeecCCcccccc
Q psy11797        103 GRCVNLEG----SYRCECERGFKLS---------------------------LDGKQCLGKGQFVEFRIILSMPKAENSV  151 (249)
Q Consensus       103 g~C~~~~g----~~~C~C~~G~~~~---------------------------~~g~~C~~~~~~~~~~~~~~~~~~~~~~  151 (249)
                      +.|+++.+    +|+|.|++||.++                           ..+..|++|++|..              
T Consensus        62 ~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~--------------  127 (162)
T 1uzk_A           62 TACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQE--------------  127 (162)
T ss_dssp             --CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHH--------------
T ss_pred             CcccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccC--------------
Confidence            57888776    6778777777632                           22233444444421              


Q ss_pred             cCCCCCccccccccCCCCcccCCCCCCcc
Q psy11797        152 NNNNNQRLGFCYRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       152 ~~~~~~~~~~C~~~~~~~~C~c~~g~~~~  180 (249)
                      ...+|.+ ++|+++.++|+|.|+.||++.
T Consensus       128 ~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~  155 (162)
T 1uzk_A          128 LPGLCQG-GKCINTFGSFQCRCPTGYYLN  155 (162)
T ss_dssp             CGGGGBT-SEEEECSSCEEEECCTTCCBC
T ss_pred             CCCCcCC-CEeEcCCCCEEeeCCCCccCC
Confidence            1123554 699999999999999999887

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.59  E-value=1.6e-15  Score=115.56  Aligned_cols=101  Identities=35%  Similarity=0.740  Sum_probs=78.4

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCccccc--------------------cc---------------
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIA--------------------TT---------------   73 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~--------------------~~---------------   73 (249)
                      +|||||++.++.. ++|++++++|+|.|++||+|........+                    .+               
T Consensus         2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g   80 (147)
T 2w86_A            2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWG   80 (147)
T ss_dssp             CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEET
T ss_pred             CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccC
Confidence            4678887755442 68999999999999999998754321110                    00               


Q ss_pred             -------CCccccCCC---CCCceecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         74 -------DTRTAESGG---KSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        74 -------~~~~~~~~~---~~~~C~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                             +...|..|+   .+..|++|+||...+++|.++.|+++.++|+|.|++||.+..++++|+
T Consensus        81 ~~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~  147 (147)
T 2w86_A           81 SPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL  147 (147)
T ss_dssp             TTTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred             CCcccCCCcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence                   234688888   488999999999767789977999999999999999999888888773

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.57  E-value=4.2e-15  Score=112.55  Aligned_cols=119  Identities=24%  Similarity=0.490  Sum_probs=85.0

Q ss_pred             CccCCCCCCCCCCceecC--CCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeee--
Q psy11797         32 DECRTPANTCKFSCKNLI--GSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCV--  106 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~~--gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~--  106 (249)
                      |+|...++..+++|++..  ++|+|.|++||+|..++....       +  ......|.++++|..  .+|. ++.|+  
T Consensus         1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~-------~--~~~~~~c~~~~~C~~--~~C~~~g~C~~~   69 (143)
T 4d90_A            1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVE-------V--ASDEEEPTSAGPCTP--NPCHNGGTCEIS   69 (143)
T ss_dssp             --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCC-------C--TTTTTSCCCCCTTSS--CCCCTTCEEEEC
T ss_pred             CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCcc-------c--cccccccccCCcCCC--CCCCCCCEecCC
Confidence            355555555556777654  689999999999988763100       0  001234567888874  7898 56999  


Q ss_pred             -----eCCCcceeecCCCceeCCCCCCcc-cCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCcc
Q psy11797        107 -----NLEGSYRCECERGFKLSLDGKQCL-GKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       107 -----~~~g~~~C~C~~G~~~~~~g~~C~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~  180 (249)
                           ++.++|+|.|++||.    +..|+ ++++|                ...+|.+.++|.+..++|+|.|++||++.
T Consensus        70 ~~~~~~~~~~~~C~C~~G~~----G~~C~~~i~~C----------------~~~~C~~~~~C~~~~g~~~C~C~~G~~G~  129 (143)
T 4d90_A           70 EAYRGDTFIGYVCKCPRGFN----GIHCQHNINEC----------------EVEPCKNGGICTDLVANYSCECPGEFMGR  129 (143)
T ss_dssp             CCEETTEECCEEEECCTTEE----STTSCEECCTT----------------TTCCSCTTCEEEEETTEEEEECCTTCBST
T ss_pred             CccccCCCCCeEeECcCCCc----CCCcccCCCcC----------------CCCCCCCCCEeECCCCCeEeECCCCCccC
Confidence                 677899999999998    88997 65554                34557888999999999999999999876


Q ss_pred             C
Q psy11797        181 M  181 (249)
Q Consensus       181 ~  181 (249)
                      .
T Consensus       130 ~  130 (143)
T 4d90_A          130 N  130 (143)
T ss_dssp             T
T ss_pred             C
Confidence            4

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.56  E-value=3.7e-15  Score=103.30  Aligned_cols=83  Identities=43%  Similarity=0.953  Sum_probs=69.4

Q ss_pred             CCCCccCCCCCCC-CCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeee
Q psy11797         29 IDVDECRTPANTC-KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVN  107 (249)
Q Consensus        29 ~did~C~~~~~~c-~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~  107 (249)
                      +|||+|+..+..| .++|+++.++|+|.|++||++....                  ..|++|+||..  ++|. +.|++
T Consensus         1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g------------------~~C~dideC~~--~~C~-~~C~n   59 (87)
T 1z6c_A            1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKS------------------KSCEDIDECSE--NMCA-QLCVN   59 (87)
T ss_dssp             CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTT------------------TEEECCCHHHH--SCCS-SEECC
T ss_pred             CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCC------------------CcCCCcCeeCC--CCCC-CEEEc
Confidence            4788888877556 4899999999999999999976544                  67999999975  6898 59999


Q ss_pred             CCCcceeec--CCCceeCCCCCCcccC
Q psy11797        108 LEGSYRCEC--ERGFKLSLDGKQCLGK  132 (249)
Q Consensus       108 ~~g~~~C~C--~~G~~~~~~g~~C~~~  132 (249)
                      +.++|+|.|  ..||.+..+++.|++|
T Consensus        60 ~~g~y~C~C~g~~G~~~~~~~~~C~di   86 (87)
T 1z6c_A           60 YPGGYTCYCDGKKGFKLAQDQKSCEVV   86 (87)
T ss_dssp             CSSSCCEECCSSSCCBCCTTSSSCBCC
T ss_pred             cCCCEEEECCCCcCCcccCCCCcceEC
Confidence            999999999  5788877777777764

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.56  E-value=9e-15  Score=110.81  Aligned_cols=96  Identities=31%  Similarity=0.610  Sum_probs=73.1

Q ss_pred             CCCccCCC---CCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCee
Q psy11797         30 DVDECRTP---ANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRC  105 (249)
Q Consensus        30 did~C~~~---~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C  105 (249)
                      +||+|...   ++...++|+++.++|+|.|++||+|..+...          ..+..+..|++|+||....++|. ++.|
T Consensus        43 dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~----------~~~~~~~~C~dideC~~~~~~C~~~~~C  112 (143)
T 2bou_A           43 DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKT----------FKNESENTCQDVDECSSGQHQCDSSTVC  112 (143)
T ss_dssp             ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSC----------BSSGGGCCEEECCHHHHTCCCCCTTSEE
T ss_pred             ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccc----------cccCCCCCcCCccCccCcCCCCCCCCEE
Confidence            56777654   2333378889999999999999999765421          01122357999999997668898 5799


Q ss_pred             eeCCCcceeecCCCceeCCCCCCcccCCCc
Q psy11797        106 VNLEGSYRCECERGFKLSLDGKQCLGKGQF  135 (249)
Q Consensus       106 ~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~  135 (249)
                      +++.++|+|.|++||.+..+++.|+++++|
T Consensus       113 ~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C  142 (143)
T 2bou_A          113 FNTVGSYSCRCRPGWKPRHGIPNNQKDTVC  142 (143)
T ss_dssp             EECSSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred             ECCCCCEEeeCCCCcccCCCCccCccCCcc
Confidence            999999999999999988888888875544

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.55  E-value=6.6e-15  Score=100.81  Aligned_cols=77  Identities=44%  Similarity=1.014  Sum_probs=59.4

Q ss_pred             CCCccCCCCCCCC-CCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeC
Q psy11797         30 DVDECRTPANTCK-FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNL  108 (249)
Q Consensus        30 did~C~~~~~~c~-~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~  108 (249)
                      |||+|.. +..|. ++|+++.++|+|.|++||++..                    ..|++|++|.. .++|.++.|+++
T Consensus         4 dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~~g--------------------~~C~dideC~~-~~~C~~~~C~n~   61 (82)
T 1emn_A            4 DMDECKE-PDVCKHGQCINTDGSYRCECPFGYILAG--------------------NECVDTDECSV-GNPCGNGTCKNV   61 (82)
T ss_dssp             CCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEEET--------------------TEEEECCGGGT-CCTTSSSCEEEC
T ss_pred             ccccCCC-CCCcCCCEEEecCCCEEEECCCCeECCC--------------------CccCCcccccC-CCCCCCCEeECC
Confidence            4555554 22232 5788888999999999998632                    67899999985 478987799999


Q ss_pred             CCcceeecCCCceeCCCCCCc
Q psy11797        109 EGSYRCECERGFKLSLDGKQC  129 (249)
Q Consensus       109 ~g~~~C~C~~G~~~~~~g~~C  129 (249)
                      .++|+|.|++||.+..+ +.|
T Consensus        62 ~g~y~C~C~~G~~g~~~-~~C   81 (82)
T 1emn_A           62 IGGFECTCEEGFEPGPM-MTC   81 (82)
T ss_dssp             SSSEEECCSSSSCCCSS-SCC
T ss_pred             CCCEEeECCCCeEeCCC-Ccc
Confidence            99999999999986554 444

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.55  E-value=1.6e-15  Score=111.20  Aligned_cols=109  Identities=27%  Similarity=0.621  Sum_probs=81.4

Q ss_pred             CCCCccCCCCCCCCCCceec-CCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeee
Q psy11797         29 IDVDECRTPANTCKFSCKNL-IGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVN  107 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~-~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~  107 (249)
                      +|||+|...  +|.++|+++ .++|+|.|++||+|.....                 ..|++  +|.  .++|. +.|++
T Consensus         2 ~dideC~~~--pC~~~C~~~~~g~y~C~C~~Gy~g~~~~~-----------------~~C~~--~C~--~~~C~-~~C~~   57 (118)
T 1dx5_I            2 EPVDPCFRA--NCEYQCQPLDQTSYLCVCAEGFAPIPHEP-----------------HRCQM--FCN--QTACP-ADCDP   57 (118)
T ss_dssp             CCCCGGGGC--CCSSEEEECSSSCEEEECCTTEEEETTEE-----------------EEEEE--CCC--SSEEE-CEECT
T ss_pred             CccccCCCC--CCCCCCCCCCCCCEEeECCCCccccCCCC-----------------Ccccc--ccC--CCCCC-CcccC
Confidence            467888653  455689999 8999999999999864321                 22322  233  35565 48888


Q ss_pred             CCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCcc
Q psy11797        108 LEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       108 ~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~  180 (249)
                       .++|+|.|++||.+.. ++.|+++++|..               ..+|  .++|++..++|+|.|+.||++.
T Consensus        58 -~~~y~C~C~~Gy~~~~-g~~C~dideC~~---------------~~~C--~~~C~n~~g~y~C~C~~G~~g~  111 (118)
T 1dx5_I           58 -NTQASCECPEGYILDD-GFICTDIDECEN---------------GGFC--SGVCHNLPGTFECICGPDSALA  111 (118)
T ss_dssp             -TSTTCEECCTTEEEET-TTEEEECCHHHH---------------CSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred             -CCCeEeECCCCccCCC-CCccccccccCC---------------CCCC--cCeEEeCCCCEEEECCCCCccC
Confidence             5899999999999766 789988887753               1334  6889999999999999999865

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.55  E-value=2.1e-15  Score=119.38  Aligned_cols=113  Identities=21%  Similarity=0.442  Sum_probs=89.0

Q ss_pred             CCCCccCCC--CCCC--CCCceecC-----CCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCC
Q psy11797         29 IDVDECRTP--ANTC--KFSCKNLI-----GSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDS   99 (249)
Q Consensus        29 ~did~C~~~--~~~c--~~~C~n~~-----gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~   99 (249)
                      ++||+|...  ...|  .++|+++.     ++|+|.|++||+|..+.                    |. +++|..  .+
T Consensus        42 ~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~--------------------C~-~d~C~~--~~   98 (186)
T 1z1y_A           42 EEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT--------------------CV-LDVCQY--XN   98 (186)
T ss_dssp             EECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE--------------------EE-EGGGTT--CC
T ss_pred             CCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC--------------------CC-CCcCcC--CC
Confidence            367899843  2344  48999998     89999999999997643                    44 789985  67


Q ss_pred             CC-CCeee----eCCCcceeecCCCceeCC-CCCCcccC--CCccceeeeecCCcccccccCCCC-CccccccccCCCCc
Q psy11797        100 CA-NGRCV----NLEGSYRCECERGFKLSL-DGKQCLGK--GQFVEFRIILSMPKAENSVNNNNN-QRLGFCYRSLTNGR  170 (249)
Q Consensus       100 C~-~g~C~----~~~g~~~C~C~~G~~~~~-~g~~C~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~  170 (249)
                      |. ++.|+    ++.++|+|.|++||.+.. +++.|+++  ++|                . .+| ..+++|++..++|+
T Consensus        99 C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C----------------~-~~C~~~~~~C~n~~g~y~  161 (186)
T 1z1y_A           99 CGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETAC----------------Q-LXCNTDNEVCXNVEGVYX  161 (186)
T ss_dssp             CCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCC----------------C-CCCCTTTEEEEEETTEEE
T ss_pred             CCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcc----------------c-ccccccCcceecCCCCee
Confidence            98 67999    888999999999999644 56888874  333                2 257 77899999999999


Q ss_pred             ccCCCCCCccC
Q psy11797        171 CVLPTGPALLM  181 (249)
Q Consensus       171 C~c~~g~~~~~  181 (249)
                      |.|++||++..
T Consensus       162 C~C~~G~~g~~  172 (186)
T 1z1y_A          162 CQCMEGFTFDX  172 (186)
T ss_dssp             EEECTTCEEET
T ss_pred             eECCCCCccCc
Confidence            99999998763

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.52  E-value=4.7e-14  Score=129.47  Aligned_cols=119  Identities=26%  Similarity=0.595  Sum_probs=88.3

Q ss_pred             ccCcccCCCCCCCCcceeeC---------------------CCCCccCCCCCCCC--C---CceecCCCeeee-cCCCcc
Q psy11797          9 SDVDECRTPANTCKFSCKNL---------------------IDVDECRTPANTCK--F---SCKNLIGSYMCT-CPPGYQ   61 (249)
Q Consensus         9 ~di~eC~~~~~~c~~~C~~~---------------------~did~C~~~~~~c~--~---~C~n~~gsy~C~-C~~G~~   61 (249)
                      +|||||+.+||..+++|+++                     ++|+||...++.|.  +   +|+++.++|+|. |++||+
T Consensus         1 ~DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~   80 (634)
T 1yo8_A            1 ADPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYR   80 (634)
T ss_dssp             ---CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEE
T ss_pred             CcccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcc
Confidence            37899998888877677654                     46899998886665  5   899999999998 999999


Q ss_pred             ccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCC----CcceeecCCCceeCCCCCCcc---cCC
Q psy11797         62 QVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLE----GSYRCECERGFKLSLDGKQCL---GKG  133 (249)
Q Consensus        62 g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~----g~~~C~C~~G~~~~~~g~~C~---~~~  133 (249)
                      |..++.......       ...+..|+++++|....++|. ++.|+++.    ++|+|.|++||..  +++.|+   +++
T Consensus        81 G~~c~g~g~~~~-------~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce~d~DiD  151 (634)
T 1yo8_A           81 GNQPVGVGLEAA-------KTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICGEDSDLD  151 (634)
T ss_dssp             ECCCEESSSHHH-------HSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEEECTTSS
T ss_pred             cCcccccccccc-------ccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccc--cCcccccccCcc
Confidence            987541100000       012356899999997667998 56999998    9999999999983  457897   566


Q ss_pred             Ccc
Q psy11797        134 QFV  136 (249)
Q Consensus       134 ~~~  136 (249)
                      +|.
T Consensus       152 eC~  154 (634)
T 1yo8_A          152 GWP  154 (634)
T ss_dssp             SSC
T ss_pred             ccc
Confidence            664

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.51  E-value=2.4e-14  Score=108.48  Aligned_cols=109  Identities=25%  Similarity=0.501  Sum_probs=81.4

Q ss_pred             CCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCC-CCCC-CCeeeeCCCcceeecCCC
Q psy11797         42 KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNL-DSCA-NGRCVNLEGSYRCECERG  119 (249)
Q Consensus        42 ~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~-~~C~-~g~C~~~~g~~~C~C~~G  119 (249)
                      .++|++.   |+|.|++||+|....             ....+..|++|++|+... .+|. ++.|+++.++|+|.|++|
T Consensus        12 ~~~C~~~---~~C~C~~G~~g~~~~-------------~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~G   75 (143)
T 2bou_A           12 DSSCVNA---TACRCNPGFSSFSEI-------------ITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPG   75 (143)
T ss_dssp             TEEESSS---SCEEECTTEECSSSS-------------BCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTT
T ss_pred             CCEEcCC---CEEeCCCCCcCcccc-------------ccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCC
Confidence            3677764   899999999986311             001225789999999632 3798 579999999999999999


Q ss_pred             ceeCCC--------CCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCcc
Q psy11797        120 FKLSLD--------GKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       120 ~~~~~~--------g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~  180 (249)
                      |.+...        +..|+++++|...              ..+|.+.++|++..++|+|.|+.||++.
T Consensus        76 y~g~~~~~~~~~~~~~~C~dideC~~~--------------~~~C~~~~~C~n~~g~y~C~C~~Gy~g~  130 (143)
T 2bou_A           76 YEPVSGAKTFKNESENTCQDVDECSSG--------------QHQCDSSTVCFNTVGSYSCRCRPGWKPR  130 (143)
T ss_dssp             EEETTCCSCBSSGGGCCEEECCHHHHT--------------CCCCCTTSEEEECSSCEEEECCSSSCBC
T ss_pred             cccCcCccccccCCCCCcCCccCccCc--------------CCCCCCCCEEECCCCCEEeeCCCCcccC
Confidence            996542        3477777666421              2456778999999999999999999877

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.50  E-value=1.5e-14  Score=109.94  Aligned_cols=85  Identities=27%  Similarity=0.605  Sum_probs=69.7

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCee-ee
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRC-VN  107 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C-~~  107 (249)
                      +|||+|..+++..+++|+++.++|.|.|++||+|.                      .|+++++|...+.+|.+ .| ++
T Consensus        46 ~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~----------------------~C~~~deC~~~~~~C~~-~C~~n  102 (146)
T 1x7a_L           46 VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK----------------------NCELDATCNIKNGRCKQ-FCKTG  102 (146)
T ss_dssp             ----CCSSCSSCTTCEEEECSSCEEEECCSSEEST----------------------TTCEECCTTSGGGSCSS-BCCCC
T ss_pred             CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC----------------------cCCCCccccCCCCCCcC-CCCCC
Confidence            67889988777667899999999999999999984                      45677999875567887 89 99


Q ss_pred             CCCcceeecCCCceeCCCCCCcccCCCcc
Q psy11797        108 LEGSYRCECERGFKLSLDGKQCLGKGQFV  136 (249)
Q Consensus       108 ~~g~~~C~C~~G~~~~~~g~~C~~~~~~~  136 (249)
                      +.++|+|.|++||.+..++++|++++++.
T Consensus       103 ~~g~y~C~C~~Gy~l~~dG~~C~~~~~~p  131 (146)
T 1x7a_L          103 ADSKVLCSCTTGYRLAPDQKSCKPAVPFP  131 (146)
T ss_dssp             SSSCCCCBCCTTEEECTTSSSEEECSSSC
T ss_pred             CCCCEEeEcCCCcEeCCCCCcCCCCCCCC
Confidence            99999999999999999999999866553

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=99.49  E-value=2.8e-15  Score=114.16  Aligned_cols=124  Identities=32%  Similarity=0.766  Sum_probs=84.7

Q ss_pred             ecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCC
Q psy11797         88 VDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLT  167 (249)
Q Consensus        88 ~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~  167 (249)
                      +|||||+.  ++|.++.|++++++|+|.|++||++...+++|+++.                         .+.|+....
T Consensus         2 ~dideC~~--~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~-------------------------~~~C~~~~~   54 (147)
T 2w86_A            2 ADIDECES--SPCINGVCKNSPGSFICECSSESTLDPTKTICIETI-------------------------KGTCWQTVI   54 (147)
T ss_dssp             CCCCGGGG--CCSBTSEEEEETTEEEEECCTTEEECTTSSBEEECC-------------------------CEEEEEEEE
T ss_pred             CcCccCcC--CCCCCCEeECCCCCEEeECCCCcccCCCCCeecCCC-------------------------CCcccCCCC
Confidence            47899985  789988999999999999999999877777787632                         122332222


Q ss_pred             CCcccCCCCCCccCCCCcceeecCCCCccCCCCccCCCCCCchhhccCCCCCccC---CC-CCCcccccCCCCCCCCccc
Q psy11797        168 NGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTV---DG-RDIDECVTIPAVESSKLAK  243 (249)
Q Consensus       168 ~~~C~c~~g~~~~~~~~~~~C~C~~g~~~g~~C~~C~~~~~~~~~c~Cp~~G~~~---~~-~dideC~~~~~~C~ng~c~  243 (249)
                      +..|.....    .......|....+..|+..|..|      .|.|.| ++||++   .. +|||||++.|+.|+||.|+
T Consensus        55 g~~C~~~~~----~c~~~~~C~~~~g~~~g~~C~~c------~~~C~C-~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~  123 (147)
T 2w86_A           55 DGRCEININ----GATLKSQCCSSLGAAWGSPCTLC------QVDPIC-GKGYSRIKGTQCEDIDECEVFPGVCKNGLCV  123 (147)
T ss_dssp             TTEEEEEEE----EEECHHHHHTTTCSEETTTTEEC------CCCTTT-CTTEEEEETTEEEECCHHHHSTTCSSSSEEE
T ss_pred             CCccccCCC----ccccCCccccCcCcccCCCcccC------CCcccC-CCccccCCCCccCccccccCCCCCCCCCEEE
Confidence            222321000    00111234434555567777644      278999 699964   22 5999999988899999999


Q ss_pred             ccccCC
Q psy11797        244 MFLRAY  249 (249)
Q Consensus       244 ~~~~~y  249 (249)
                      |+.++|
T Consensus       124 n~~g~y  129 (147)
T 2w86_A          124 NTRGSF  129 (147)
T ss_dssp             EETTEE
T ss_pred             CCCCCE
Confidence            999887

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=99.46  E-value=9.2e-14  Score=101.15  Aligned_cols=74  Identities=30%  Similarity=0.599  Sum_probs=59.6

Q ss_pred             CCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeCCCcceeecCCCc
Q psy11797         41 CKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGF  120 (249)
Q Consensus        41 c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~  120 (249)
                      .+++|+++.++|+|.|++||+|..++.                   -.++++|....+.|.+ .|+++.++|+|.|++||
T Consensus        24 ~~g~C~~~~~~y~C~C~~G~~G~~C~~-------------------~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~   83 (114)
T 1aut_L           24 GHGTCIDGIGSFSCDCRSGWEGRFCQR-------------------EVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGY   83 (114)
T ss_dssp             TSEEECCCSSCCCEEECTTEESTTSCE-------------------ECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTE
T ss_pred             CcCCCCCCCCCcEeeCCCCCcCCCcCc-------------------CCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCe
Confidence            347888889999999999999976651                   1224578764566776 89999999999999999


Q ss_pred             eeCCCCCCcccCCC
Q psy11797        121 KLSLDGKQCLGKGQ  134 (249)
Q Consensus       121 ~~~~~g~~C~~~~~  134 (249)
                      .+..++++|+++.+
T Consensus        84 ~~~~~g~~C~~~~~   97 (114)
T 1aut_L           84 KLGDDLLQCHPAVK   97 (114)
T ss_dssp             EECTTSSCEEECSS
T ss_pred             eECCCCCccCcCcc
Confidence            99989999988433

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.46  E-value=2.8e-16  Score=129.24  Aligned_cols=184  Identities=12%  Similarity=-0.024  Sum_probs=122.6

Q ss_pred             CCCCc-cCcc------cCCCCCCCCcceeeC---CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCccccc---
Q psy11797          5 TFICS-DVDE------CRTPANTCKFSCKNL---IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIA---   71 (249)
Q Consensus         5 g~~C~-di~e------C~~~~~~c~~~C~~~---~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~---   71 (249)
                      |..|+ +|+|      |.+.|+.++++|...   .+.++|.+.++..+++|++...+|+|.|++||+|..++.....   
T Consensus        63 G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n  142 (267)
T 4fbr_A           63 GTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVEN  142 (267)
T ss_dssp             EEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEE
T ss_pred             cccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccc
Confidence            45565 6788      888888888888654   4567899988888899999999999999999999998854322   


Q ss_pred             --ccCCccccCCC---CCCceecCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCC
Q psy11797         72 --TTDTRTAESGG---KSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMP  145 (249)
Q Consensus        72 --~~~~~~~~~~~---~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~  145 (249)
                        .+...+|..++   .+..|.....|..  .+|. +|+|++...+|+|.||+||+    ++.|+......+..      
T Consensus       143 ~~~c~s~pC~ngg~c~~G~~c~~~i~c~~--~~c~ngg~C~dg~~~y~C~Cp~Gf~----G~~c~~~i~ec~~~------  210 (267)
T 4fbr_A          143 QWGGSAAPWHSGGVWVLGTRGKQNVINVD--AKSNDGGKTLSGTMTYNGEGPIGFR----GTLTSPDTYTVENQ------  210 (267)
T ss_dssp             ECSSTTSCCEEEEEEECCSSTTSCEEEEE--EECSSTTSEEEEEEEETTSCCEEEE----EEEEETTEEEEEEE------
T ss_pred             cCCcCCccccCCcceecccccccccccCC--CCCCCCCEeeCCCCCeEEeCCCCcc----ccccccccceeccC------
Confidence              14445555554   3555543333442  5677 56999999999999999999    88887643221111      


Q ss_pred             cccccccCCCCCccccccccCCCCcccCCCCCCccCCCCcceeecCCCCccCCCCccCCCCCCchhhccCCCCCccCC
Q psy11797        146 KAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVD  223 (249)
Q Consensus       146 ~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~~~~~~~C~C~~g~~~g~~C~~C~~~~~~~~~c~Cp~~G~~~~  223 (249)
                         ..+...++.+.+.       +.+.|..++.      ...|...-  .++++|    +++..+|.|.| ++||+|.
T Consensus       211 ---~~c~~~~c~~gG~-------~~~~C~~g~n------~~~c~~~c--~ngGtC----~dg~~sy~CeC-p~GF~G~  265 (267)
T 4fbr_A          211 ---WGGSTAPWNPGGF-------WMIGARNGQN------VVALNVAS--SDGGKT----LAGTMIYNGEG-PIGFRAR  265 (267)
T ss_dssp             ---CSCTTSCCEEEEE-------EECCCCTTCC------EEEEEEEC--SSTTSE----EEEEEEETTSC-CEEEEEE
T ss_pred             ---CCccCCcccCCCe-------EEEecCCCCc------cccCCcCC--CCCCEe----eCCCcceeecC-CCCcccc
Confidence               1122233333333       3344555542      22333222  257788    78889999999 5999873

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.44  E-value=2.7e-14  Score=104.63  Aligned_cols=96  Identities=29%  Similarity=0.686  Sum_probs=73.6

Q ss_pred             ccCcccCCCCCCCCcceeeC-C----------------CCCccCC--CCCCCCCCceecCCCeeeecCCCccccCCCccc
Q psy11797          9 SDVDECRTPANTCKFSCKNL-I----------------DVDECRT--PANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVA   69 (249)
Q Consensus         9 ~di~eC~~~~~~c~~~C~~~-~----------------did~C~~--~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~   69 (249)
                      +|||||+.+||.  ++|+++ .                ++++|..  ....|.+.|++ .++|+|.|++||++.. .   
T Consensus         2 ~dideC~~~pC~--~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~-g---   74 (118)
T 1dx5_I            2 EPVDPCFRANCE--YQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDD-G---   74 (118)
T ss_dssp             CCCCGGGGCCCS--SEEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEET-T---
T ss_pred             CccccCCCCCCC--CCCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCCCcccC-CCCeEeECCCCccCCC-C---
Confidence            489999888875  488887 2                2456653  12344578888 5899999999999754 2   


Q ss_pred             ccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCC-CCC
Q psy11797         70 IATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLD-GKQ  128 (249)
Q Consensus        70 ~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~-g~~  128 (249)
                                     ..|++|+||.. .++| ++.|+++.++|+|.|++||.+..+ +++
T Consensus        75 ---------------~~C~dideC~~-~~~C-~~~C~n~~g~y~C~C~~G~~g~~~~g~~  117 (118)
T 1dx5_I           75 ---------------FICTDIDECEN-GGFC-SGVCHNLPGTFECICGPDSALAGQIGTD  117 (118)
T ss_dssp             ---------------TEEEECCHHHH-CSSC-SSEEEECSSSEEEEECSSSSCEEEESCC
T ss_pred             ---------------CccccccccCC-CCCC-cCeEEeCCCCEEEECCCCCccCCCCCCC
Confidence                           67899999986 4789 579999999999999999986544 444

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.43  E-value=3e-14  Score=102.41  Aligned_cols=79  Identities=42%  Similarity=1.024  Sum_probs=33.6

Q ss_pred             CCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeCC
Q psy11797         30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLE  109 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~  109 (249)
                      ++|+|...+..|.++|+++.++|.|.|++||+|.. .                  ..|++|+||.. +++|. +.|+|+.
T Consensus        28 d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~-g------------------~~C~dideC~~-~~~C~-~~C~n~~   86 (107)
T 2w2n_E           28 GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVA-Q------------------RRCEDIDECQD-PDTCS-QLCVNLE   86 (107)
T ss_dssp             SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEET-T------------------TEEEC--------------------
T ss_pred             cCccCcCCCCCCCCEeEeCCCCeEEECCCCccccC-C------------------CccccccccCC-CCCcC-CeeecCC
Confidence            67788776667778899999999999999999852 1                  57899999984 47887 5899999


Q ss_pred             CcceeecCCCceeCCCCCCc
Q psy11797        110 GSYRCECERGFKLSLDGKQC  129 (249)
Q Consensus       110 g~~~C~C~~G~~~~~~g~~C  129 (249)
                      ++|.|.|++||.+..++++|
T Consensus        87 gsy~C~C~~Gy~~~~d~~~C  106 (107)
T 2w2n_E           87 GGYKCQCEEGFQLDPHTKAC  106 (107)
T ss_dssp             --------------------
T ss_pred             CCEEEECCCCceECCCCCcc
Confidence            99999999999987777766

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.41  E-value=4.5e-13  Score=101.28  Aligned_cols=75  Identities=29%  Similarity=0.809  Sum_probs=62.7

Q ss_pred             CCCccCCCCCCCCCCce-------ecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-
Q psy11797         30 DVDECRTPANTCKFSCK-------NLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-  101 (249)
Q Consensus        30 did~C~~~~~~c~~~C~-------n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-  101 (249)
                      ++++|...++..+++|+       ++.++|.|.|++||+|..++                     .++++|..  .+|. 
T Consensus        51 ~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~---------------------~~i~~C~~--~~C~~  107 (143)
T 4d90_A           51 SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQ---------------------HNINECEV--EPCKN  107 (143)
T ss_dssp             CCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSC---------------------EECCTTTT--CCSCT
T ss_pred             cCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcc---------------------cCCCcCCC--CCCCC
Confidence            45778777666668998       67789999999999985544                     48999984  7898 


Q ss_pred             CCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797        102 NGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus       102 ~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ++.|+++.++|+|.|++||.    |+.|+.
T Consensus       108 ~~~C~~~~g~~~C~C~~G~~----G~~c~~  133 (143)
T 4d90_A          108 GGICTDLVANYSCECPGEFM----GRNCQY  133 (143)
T ss_dssp             TCEEEEETTEEEEECCTTCB----STTSCB
T ss_pred             CCEeECCCCCeEeECCCCCc----cCCcee
Confidence            57999999999999999999    888766

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.40  E-value=8.2e-14  Score=104.31  Aligned_cols=84  Identities=31%  Similarity=0.698  Sum_probs=37.4

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecC-cccccCCCCCCCCeeee
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDV-NECELNLDSCANGRCVN  107 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i-~~C~~~~~~C~~g~C~~  107 (249)
                      +++|+|...++..+++|+++.++|+|.|++||+|..++                     .++ ++|...+++|.+ .|++
T Consensus        40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~---------------------~~i~d~C~~~~~~C~~-~C~~   97 (134)
T 2vh0_B           40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE---------------------LFTRKLCSLDNGDCDQ-FCHE   97 (134)
T ss_dssp             --------------------------------------------------------------CCGGGTGGGGCSS-EEEE
T ss_pred             CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccc---------------------cCCCCccccCCCCCCC-EeEC
Confidence            57788887776666899999999999999999985443                     236 889865567887 9999


Q ss_pred             CCCcceeecCCCceeCCCCCCcccCCC
Q psy11797        108 LEGSYRCECERGFKLSLDGKQCLGKGQ  134 (249)
Q Consensus       108 ~~g~~~C~C~~G~~~~~~g~~C~~~~~  134 (249)
                      +.++|+|.|++||.+..++++|+++++
T Consensus        98 ~~g~y~C~C~~Gy~l~~~g~~C~~~~~  124 (134)
T 2vh0_B           98 EQNSVVCSCARGYTLADNGKACIPTGP  124 (134)
T ss_dssp             ETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred             CCCCEEEECCCCcEECCCCCccCcCCC
Confidence            999999999999999999999988544

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.39  E-value=9.4e-14  Score=109.95  Aligned_cols=84  Identities=31%  Similarity=0.698  Sum_probs=37.8

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecC-cccccCCCCCCCCeeee
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDV-NECELNLDSCANGRCVN  107 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i-~~C~~~~~~C~~g~C~~  107 (249)
                      +++|+|...++..+++|++..++|.|.|++||+|..|+                     .+| ++|...+.+|.+ .|++
T Consensus        40 ~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce---------------------~~i~deC~~~~~~C~~-~C~n   97 (195)
T 1nfu_B           40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE---------------------LFTRKLCSLDNGDCDQ-FCHE   97 (195)
T ss_dssp             --------------------------------------------------------------CCGGGTGGGGCSS-EEEE
T ss_pred             CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceecccc---------------------ccccccccCCCCCCCC-EeEC
Confidence            57788887776666899999999999999999985543                     236 889875567887 9999


Q ss_pred             CCCcceeecCCCceeCCCCCCcccCCC
Q psy11797        108 LEGSYRCECERGFKLSLDGKQCLGKGQ  134 (249)
Q Consensus       108 ~~g~~~C~C~~G~~~~~~g~~C~~~~~  134 (249)
                      +.++|.|.|++||.+..++++|++++.
T Consensus        98 ~~gsy~C~C~~Gy~l~~dG~~C~~~~~  124 (195)
T 1nfu_B           98 EQNSVVCSCARGYTLADNGKACIPTGP  124 (195)
T ss_dssp             ETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred             CCCCeEEECCCCceeCCCCCccccCCC
Confidence            999999999999999999999998643

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.37  E-value=6.4e-13  Score=100.44  Aligned_cols=86  Identities=24%  Similarity=0.575  Sum_probs=68.4

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCccc---ccCCCCCCCCee
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNEC---ELNLDSCANGRC  105 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C---~~~~~~C~~g~C  105 (249)
                      +|+|+|.+.++..+++|+++.++|+|.|++||+|..++                     .++++|   ....+.|.+ .|
T Consensus        45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~---------------------~~~~~c~~c~~~~~~C~~-~C  102 (142)
T 2c4f_L           45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE---------------------THKDDQLICVNENGGCEQ-YC  102 (142)
T ss_dssp             TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSC---------------------EEGGGCCSTTTGGGGCSS-EE
T ss_pred             CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccc---------------------cCccccccccCCCCCccC-Ee
Confidence            67899988776666899999999999999999986654                     235554   222344554 89


Q ss_pred             eeCCC-cceeecCCCceeCCCCCCcccCCCcc
Q psy11797        106 VNLEG-SYRCECERGFKLSLDGKQCLGKGQFV  136 (249)
Q Consensus       106 ~~~~g-~~~C~C~~G~~~~~~g~~C~~~~~~~  136 (249)
                      +++.+ +|+|.|++||.+..++++|++++++.
T Consensus       103 ~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e~p  134 (142)
T 2c4f_L          103 SDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP  134 (142)
T ss_dssp             ECCTTSCCEEECCTTEEECTTSSCEEESSSSC
T ss_pred             ECCCCCCEEEECCCCceECCCCCCCCCCCccC
Confidence            99999 99999999999999999999876643

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.31  E-value=9.8e-15  Score=120.09  Aligned_cols=191  Identities=11%  Similarity=-0.032  Sum_probs=120.5

Q ss_pred             CCCCCCCceecCCCeeeecCCCccccCCCccccc-----ccCCccccCCC---CCCceecCcccccCCCCCC-CCeeeeC
Q psy11797         38 ANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIA-----TTDTRTAESGG---KSHECVDVNECELNLDSCA-NGRCVNL  108 (249)
Q Consensus        38 ~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~-----~~~~~~~~~~~---~~~~C~~i~~C~~~~~~C~-~g~C~~~  108 (249)
                      ++..+++|++..++|+|.|++||+|..++.....     .+...+|.+++   .+..|..+++|+.  .+|. .++|++.
T Consensus        39 ~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s--~pC~ngG~C~~~  116 (267)
T 4fbr_A           39 KSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVS--IKSNDGGKTLTG  116 (267)
T ss_dssp             ECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEE--EECSSTTSEEEE
T ss_pred             CcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCC--CCCCCCCEEecC
Confidence            3455699999999999999999999999754222     26777888775   5677888889985  7899 4699999


Q ss_pred             CCcceeecCCCceeCCCCCCccc-CCCccceeeeecCCc------------cc-ccccCCCCCccccccccCCCCcccCC
Q psy11797        109 EGSYRCECERGFKLSLDGKQCLG-KGQFVEFRIILSMPK------------AE-NSVNNNNNQRLGFCYRSLTNGRCVLP  174 (249)
Q Consensus       109 ~g~~~C~C~~G~~~~~~g~~C~~-~~~~~~~~~~~~~~~------------~~-~~~~~~~~~~~~~C~~~~~~~~C~c~  174 (249)
                      ..+|+|.|+.||+    +.+|+. ++++.......+.|.            .. ..+...++.+.+.|++..++|+|.|+
T Consensus       117 ~~sy~C~C~~Gf~----G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp  192 (267)
T 4fbr_A          117 TTTYNGEGPIGFK----SEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGP  192 (267)
T ss_dssp             EEEETTSCCEEEE----EEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCC
T ss_pred             CccEEeeCCCCcc----ccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCC
Confidence            9999999999999    777754 233221111111111            00 11223457777777777777778888


Q ss_pred             CCCCccC-CCCcceeecCCCCccCCCCccCCCCCCchhhccCCCCCccCCCCCCcccccCCCCCCC-CcccccccCC
Q psy11797        175 TGPALLM-EVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDIDECVTIPAVESS-KLAKMFLRAY  249 (249)
Q Consensus       175 ~g~~~~~-~~~~~~C~C~~g~~~g~~C~~C~~~~~~~~~c~Cp~~G~~~~~~dideC~~~~~~C~n-g~c~~~~~~y  249 (249)
                      +||.+.. ....++|.-..+.. ...|     ...+.+.+.| +.|+     .++.|.. |  |.| |.|++.+++|
T Consensus       193 ~Gf~G~~c~~~i~ec~~~~~c~-~~~c-----~~gG~~~~~C-~~g~-----n~~~c~~-~--c~ngGtC~dg~~sy  254 (267)
T 4fbr_A          193 IGFRGTLTSPDTYTVENQWGGS-TAPW-----NPGGFWMIGA-RNGQ-----NVVALNV-A--SSDGGKTLAGTMIY  254 (267)
T ss_dssp             EEEEEEEEETTEEEEEEECSCT-TSCC-----EEEEEEECCC-CTTC-----CEEEEEE-E--CSSTTSEEEEEEEE
T ss_pred             CCccccccccccceeccCCCcc-CCcc-----cCCCeEEEec-CCCC-----ccccCCc-C--CCCCCEeeCCCcce
Confidence            7777665 34455554221111 2222     2233455556 4554     3334422 3  544 6788777665

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=99.30  E-value=6.8e-13  Score=116.32  Aligned_cols=86  Identities=33%  Similarity=0.800  Sum_probs=27.1

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeC
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNL  108 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~  108 (249)
                      +|+|||..+++.|.+.|.+..|+|.|.|++||++....                  ..|++++||.. .++|.+ .|+|+
T Consensus         1 ~~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~------------------~~C~d~~eC~~-~~~C~~-~C~~~   60 (386)
T 3v65_B            1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDG------------------RTCQDVNECAE-EGYCSQ-GCTNS   60 (386)
T ss_dssp             ----------------------------------------------------------------------CCTT-EEC--
T ss_pred             CCcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCC------------------CccCccceeCC-cCcccC-cCCCC
Confidence            36788888888888899888999999999999976544                  78999999973 578987 59999


Q ss_pred             CCcceeecCCCceeCCCCCCcccCCC
Q psy11797        109 EGSYRCECERGFKLSLDGKQCLGKGQ  134 (249)
Q Consensus       109 ~g~~~C~C~~G~~~~~~g~~C~~~~~  134 (249)
                      .|+|+|.|++||.+..++++|+.+++
T Consensus        61 ~g~~~C~C~~g~~l~~d~~~C~~~~~   86 (386)
T 3v65_B           61 EGAFQCWCEAGYELRPDRRSCKALGP   86 (386)
T ss_dssp             ---CCEECCTTEEECTTSSCEEECSS
T ss_pred             CCCCeEEECCCceEcCCCCeECCccc
Confidence            99999999999999999999988665

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=99.30  E-value=3.4e-12  Score=87.15  Aligned_cols=75  Identities=33%  Similarity=0.722  Sum_probs=62.8

Q ss_pred             eecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccC
Q psy11797         87 CVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSL  166 (249)
Q Consensus        87 C~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~  166 (249)
                      |++|++|.. +++|.++.|+++.++|+|.|++||.+  +++.|+++++|..               .++|.+ ++|.+..
T Consensus         2 C~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dideC~~---------------~~~C~~-~~C~n~~   62 (82)
T 1emn_A            2 AVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECSV---------------GNPCGN-GTCKNVI   62 (82)
T ss_dssp             CCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECCGGGT---------------CCTTSS-SCEEECS
T ss_pred             CCccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcccccC---------------CCCCCC-CEeECCC
Confidence            679999986 57898889999999999999999986  4788988877742               234554 6999999


Q ss_pred             CCCcccCCCCCCcc
Q psy11797        167 TNGRCVLPTGPALL  180 (249)
Q Consensus       167 ~~~~C~c~~g~~~~  180 (249)
                      ++|+|.|+.||.+.
T Consensus        63 g~y~C~C~~G~~g~   76 (82)
T 1emn_A           63 GGFECTCEEGFEPG   76 (82)
T ss_dssp             SSEEECCSSSSCCC
T ss_pred             CCEEeECCCCeEeC
Confidence            99999999999876

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=99.27  E-value=2.6e-12  Score=88.57  Aligned_cols=77  Identities=29%  Similarity=0.658  Sum_probs=62.8

Q ss_pred             cCcccccCCCCCCCCeeeeCCCcceeecCCCceeCC-CCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCC
Q psy11797         89 DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSL-DGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLT  167 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~-~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~  167 (249)
                      ||+||+..+++|.++.|+++.++|+|.|++||.+.. +++.|+++++|....              ..|. +++|.+..+
T Consensus         2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~--------------~~C~-~~~C~n~~g   66 (86)
T 1lmj_A            2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDP--------------LLCR-GGVCHNTEG   66 (86)
T ss_dssp             CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCS--------------STTT-TSEEEEETT
T ss_pred             ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCC--------------CcCC-CCEeEcCCC
Confidence            789999766779877999999999999999998753 578899988875321              1133 478999999


Q ss_pred             CCcccCCCCCCcc
Q psy11797        168 NGRCVLPTGPALL  180 (249)
Q Consensus       168 ~~~C~c~~g~~~~  180 (249)
                      +|+|.|+.||.+.
T Consensus        67 ~y~C~C~~G~~~~   79 (86)
T 1lmj_A           67 SYRCECPPGHQLS   79 (86)
T ss_dssp             EEEEESCTTSCCC
T ss_pred             CEEEECcCCcccC
Confidence            9999999999876

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=99.26  E-value=6.6e-12  Score=107.15  Aligned_cols=89  Identities=31%  Similarity=0.637  Sum_probs=72.7

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccC-CCCCCCCeeee
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELN-LDSCANGRCVN  107 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~-~~~C~~g~C~~  107 (249)
                      .|+|+|..+++..+++|++..++|.|.|++||+|..|+                     .+++||... .++|.+ .|++
T Consensus         3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~---------------------~~~~eC~~~~~~~C~~-~C~~   60 (317)
T 3h5c_B            3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCE---------------------LAKNECHPERTDGCQH-FCLP   60 (317)
T ss_dssp             ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSC---------------------CCSSSCCTTCTTSCSS-EEEC
T ss_pred             ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccc---------------------cCcccCCCCCCCCCcC-cccc
Confidence            36677777776666888888899999999999986554                     489999853 378988 9999


Q ss_pred             CCCcceeecCCCceeCCCCCCcccCCCcccee
Q psy11797        108 LEGSYRCECERGFKLSLDGKQCLGKGQFVEFR  139 (249)
Q Consensus       108 ~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~  139 (249)
                      +.++|.|.|++||.+..+++.|.++++|..+.
T Consensus        61 ~~g~~~C~C~~g~~~~~~~~~C~~~~~c~cg~   92 (317)
T 3h5c_B           61 GQESYTCSCAQGYRLGEDHKQCVPHDQCACGV   92 (317)
T ss_dssp             CSSSCEEECCTTEECCTTSSCCEECSSCCCCC
T ss_pred             CCCeeEEecccccccccccccccccccccccc
Confidence            99999999999999888889999988886543

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=99.23  E-value=9.2e-12  Score=109.65  Aligned_cols=82  Identities=41%  Similarity=0.981  Sum_probs=71.5

Q ss_pred             CccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeCCCc
Q psy11797         32 DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGS  111 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~g~  111 (249)
                      |||...++.|.+.|++++++|.|.|++||++. ..                  ..|++++||.. +.+|.+ .|+|+.|+
T Consensus         1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~-~~------------------~~C~dideC~~-~~~C~~-~C~n~~g~   59 (400)
T 3p5b_L            1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQ------------------RRCEDIDECQD-PDTCSQ-LCVNLEGG   59 (400)
T ss_dssp             CCTTTTGGGCSSEEEECSSSEEEECCTTEEEC-SS------------------SCEEECCCCST-TSSCSS-CCBCCSSS
T ss_pred             CcccCCCCCCCCEeECCCCCeEEECCCCCCcC-CC------------------CcccCchhhhc-cCCCCC-ccCCCccc
Confidence            67888888888999999999999999999973 22                  67999999984 578986 89999999


Q ss_pred             ceeecCCCceeCCCCCCcccCCC
Q psy11797        112 YRCECERGFKLSLDGKQCLGKGQ  134 (249)
Q Consensus       112 ~~C~C~~G~~~~~~g~~C~~~~~  134 (249)
                      |.|.|++||.+..+++.|..++.
T Consensus        60 ~~C~C~~g~~~~~~~~~C~~~~~   82 (400)
T 3p5b_L           60 YKCQCEEGFQLDPHTKACKAVGS   82 (400)
T ss_dssp             CBCCCCTTCCCCTTTSSCCCSTT
T ss_pred             eeeeccccccccccccceeeccc
Confidence            99999999999888999987654

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=99.13  E-value=6.3e-11  Score=112.55  Aligned_cols=85  Identities=40%  Similarity=0.951  Sum_probs=71.7

Q ss_pred             CCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeCCC
Q psy11797         31 VDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEG  110 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~g  110 (249)
                      +++|......|.+.|++++++|.|.|++||++. ..                  ..|++|+||.. +.+|.+ .|+|+.|
T Consensus       312 ~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~-~g------------------~~C~dideC~~-~~~C~~-~C~n~~g  370 (791)
T 3m0c_C          312 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQ------------------RRCEDIDECQD-PDTCSQ-LCVNLEG  370 (791)
T ss_dssp             CCSTTTGGGGCSSEEEECSBSEEEECCTTCEEE-TT------------------TEEECCCCCSS-SSSCTT-TCCBCSS
T ss_pred             cccccccccCccccccCCCCCcccCCCCCCccC-CC------------------CccccCcccCC-CCCCCC-eeecCCC
Confidence            466666666677899999999999999999872 22                  67999999984 577875 8999999


Q ss_pred             cceeecCCCceeCCCCCCcccCCCcc
Q psy11797        111 SYRCECERGFKLSLDGKQCLGKGQFV  136 (249)
Q Consensus       111 ~~~C~C~~G~~~~~~g~~C~~~~~~~  136 (249)
                      +|+|.|++||.+..++++|+++++..
T Consensus       371 sy~C~C~~Gy~l~~~~~~C~~~~~~p  396 (791)
T 3m0c_C          371 GYKCQCEEGFQLDPHTKACKAVGSIA  396 (791)
T ss_dssp             CBCCCCCSSEECCSSCCCCEETTSCC
T ss_pred             CceeecCCCCEeCCCCceeeeccccc
Confidence            99999999999988999999887654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=99.12  E-value=1.2e-10  Score=109.42  Aligned_cols=83  Identities=40%  Similarity=0.955  Sum_probs=71.2

Q ss_pred             CCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeCC
Q psy11797         30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLE  109 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~  109 (249)
                      +++||......|.++|++++++|.|.|++||++ ...                  ..|++|+||.. +++|.+ .|+|+.
T Consensus       293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~------------------~~C~dideC~~-~~~C~~-~C~n~~  351 (699)
T 1n7d_A          293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQ------------------RRCEDIDECQD-PDTCSQ-LCVNLE  351 (699)
T ss_dssp             CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSS------------------SCCCCCCCCSS-SSSCTT-TCCBCS
T ss_pred             ccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCC------------------CcccCccccCC-CCcccc-ccccCC
Confidence            467888777778899999999999999999997 222                  67899999985 478875 899999


Q ss_pred             CcceeecCCCceeCCCCCCcccCC
Q psy11797        110 GSYRCECERGFKLSLDGKQCLGKG  133 (249)
Q Consensus       110 g~~~C~C~~G~~~~~~g~~C~~~~  133 (249)
                      ++|+|.|++||.+..++++|.+++
T Consensus       352 g~y~C~C~~G~~~~~~~~~C~~~~  375 (699)
T 1n7d_A          352 GGYKCQCEEGFQLDPHTKACKAVG  375 (699)
T ss_dssp             SCBCCCCCSSCBCCSSCCCCBCCS
T ss_pred             CCeeeeeecccccCCCCCcccccc
Confidence            999999999999988888998654

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=99.10  E-value=5.3e-11  Score=82.14  Aligned_cols=73  Identities=30%  Similarity=0.656  Sum_probs=58.5

Q ss_pred             cCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCC
Q psy11797         89 DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTN  168 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~  168 (249)
                      +|+||+..+.+|.++.|+++.++|+|.|++||.+..+++.|+++++|..                .+|.  ++|.+..++
T Consensus         2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~----------------~~C~--~~C~n~~g~   63 (87)
T 1z6c_A            2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSE----------------NMCA--QLCVNYPGG   63 (87)
T ss_dssp             CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHH----------------SCCS--SEECCCSSS
T ss_pred             ccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCC----------------CCCC--CEEEccCCC
Confidence            6889987555586569999999999999999998888899998877742                2343  689999999


Q ss_pred             CcccCC--CCCCc
Q psy11797        169 GRCVLP--TGPAL  179 (249)
Q Consensus       169 ~~C~c~--~g~~~  179 (249)
                      |+|.|+  .||.+
T Consensus        64 y~C~C~g~~G~~~   76 (87)
T 1z6c_A           64 YTCYCDGKKGFKL   76 (87)
T ss_dssp             CCEECCSSSCCBC
T ss_pred             EEEECCCCcCCcc
Confidence            999995  55543

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=99.04  E-value=1.8e-10  Score=80.14  Aligned_cols=81  Identities=22%  Similarity=0.298  Sum_probs=59.9

Q ss_pred             CeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         51 SYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        51 sy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      ||+|.|++||+|..                      | ++++|..  .     .|++..++|+|.|++||.      .|+
T Consensus         1 sy~C~C~~g~~g~~----------------------c-~~~~c~~--~-----pC~n~~~~y~C~C~~G~~------~C~   44 (91)
T 1tpg_A            1 SYQVICRDEKTQMI----------------------Y-QQHQSWL--R-----PVLRSNRVEYCWCNSGRA------QCH   44 (91)
T ss_dssp             CCCCCCBCSSSCCB----------------------C-CSSCEEE--E-----ECSSSSCEEEEECSSSCC------BCC
T ss_pred             CeeeECCCCCcCCe----------------------E-CCCcccC--C-----ccccCCCCcEeECCCCCc------ccc
Confidence            68999999998843                      3 4677764  2     466678899999999995      564


Q ss_pred             cCCCccceeeeecCCcccccccCCCCCccccccccC--CCCcccCCCCCCccC
Q psy11797        131 GKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSL--TNGRCVLPTGPALLM  181 (249)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~--~~~~C~c~~g~~~~~  181 (249)
                      .+              +.+.|..+||.++++|.+..  ++|+|.|++||.+..
T Consensus        45 ~~--------------~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~   83 (91)
T 1tpg_A           45 SV--------------PVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKS   83 (91)
T ss_dssp             EE--------------CEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSS
T ss_pred             cC--------------cCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCc
Confidence            10              12345567789999999887  788899888887653

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=99.03  E-value=1.2e-10  Score=83.49  Aligned_cols=82  Identities=23%  Similarity=0.392  Sum_probs=39.1

Q ss_pred             cCCCCCCceecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCc
Q psy11797         79 ESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQR  158 (249)
Q Consensus        79 ~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (249)
                      .+++.+..| ++++|....+.|.+ .|+++.++|.|.|++||.+. +++.|++|++|...               .+|. 
T Consensus        19 ~~~~~~~~C-d~neC~~~~~~C~~-~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~~---------------~~C~-   79 (107)
T 2w2n_E           19 ENLYFQGAM-GTNECLDNNGGCSY-VCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQDP---------------DTCS-   79 (107)
T ss_dssp             -CCCCSCCB-SCCGGGTGGGGCSS-EEECCSBSCEEECCTTCEEE-TTTEEEC---------------------------
T ss_pred             CCCcCCCCC-cCccCcCCCCCCCC-EeEeCCCCeEEECCCCcccc-CCCccccccccCCC---------------CCcC-
Confidence            344455667 78999865567874 89999999999999999964 46889998887521               2233 


Q ss_pred             cccccccCCCCcccCCCCCCcc
Q psy11797        159 LGFCYRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       159 ~~~C~~~~~~~~C~c~~g~~~~  180 (249)
                       +.|.+..++|.|.|+.||.+.
T Consensus        80 -~~C~n~~gsy~C~C~~Gy~~~  100 (107)
T 2w2n_E           80 -QLCVNLEGGYKCQCEEGFQLD  100 (107)
T ss_dssp             ----------------------
T ss_pred             -CeeecCCCCEEEECCCCceEC
Confidence             689999999999999999876

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.00  E-value=1.8e-10  Score=89.40  Aligned_cols=135  Identities=21%  Similarity=0.294  Sum_probs=80.6

Q ss_pred             CCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCC
Q psy11797         49 IGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGK  127 (249)
Q Consensus        49 ~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~  127 (249)
                      ...+.|.|++||+|..++                  ..|...       ..|. ++.|..   ...|.|++||.    |.
T Consensus        14 ~~~~~c~C~~g~~G~~C~------------------~~C~~~-------~~c~~~g~C~~---~g~C~C~~G~~----G~   61 (169)
T 2vj2_A           14 EGRSAVTCDDYYYGFGCN------------------KFCRPR-------DDFFGHYACDQ---NGNKTCMEGWM----GP   61 (169)
T ss_dssp             -------CCTTEETTTTC------------------EECCCE-------EETTEEEEECS---SCCEEECTTEE----ST
T ss_pred             ccCeeeeCCCcCcCCCcc------------------cccCCC-------CCcCCCCEeCC---CCeeECCCCCc----CC
Confidence            456899999999998765                  223221       2344 567853   45799999998    77


Q ss_pred             CcccCCCccceeeeecCCcccccccCCCCC-ccccccccCCCCcccCCCCCCccCCCCcceeecCCCCccCCCCccCCCC
Q psy11797        128 QCLGKGQFVEFRIILSMPKAENSVNNNNNQ-RLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQLCPTR  206 (249)
Q Consensus       128 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~C~~~~~~~~C~c~~g~~~~~~~~~~~C~C~~g~~~g~~C~~C~~~  206 (249)
                      .|+.. .                |. ..|. .++.|.+   .++|.|.+||.+...   .+|........| .|    + 
T Consensus        62 ~C~~~-~----------------C~-~~C~~~~g~C~~---~~~C~C~~G~~G~~C---~~C~~~~~C~~g-~C----~-  111 (169)
T 2vj2_A           62 ECNRA-I----------------CR-QGCSPKHGSCKL---PGDCRCQYGWQGLYC---DKCIPHPGCVHG-IC----N-  111 (169)
T ss_dssp             TSCEE-C----------------CC-TTCCTTTEECSS---TTCCEECTTEESSSS---CEECCCTTCSSE-EC----S-
T ss_pred             CCCCC-C----------------CC-CCCCCCCcccCC---CCeeECCCCCCCCCc---ccCCCCCCCCCC-Cc----C-
Confidence            88651 1                11 1122 3455654   578999999887642   235433322223 44    2 


Q ss_pred             CCchhhccCCCCCccCCC-C-CCcccccCCCCCCC-Cccccc-ccCC
Q psy11797        207 GSQEYTDLCLESGLTVDG-R-DIDECVTIPAVESS-KLAKMF-LRAY  249 (249)
Q Consensus       207 ~~~~~~c~Cp~~G~~~~~-~-dideC~~~~~~C~n-g~c~~~-~~~y  249 (249)
                        ..|+|+| .+||+|.. + +|++|.. ...|+| |.|++. .++|
T Consensus       112 --~~~~C~C-~~G~~G~~C~~~~~~C~~-~~~C~~~g~C~~~~~~~~  154 (169)
T 2vj2_A          112 --EPWQCLC-ETNWGGQLCDKDLNYCGT-HQPCLNGGTCSNTGPDKY  154 (169)
T ss_dssp             --STTCCEE-CTTEETTTTCEESCHHHH-TCCCCTTCEEEECSTTCE
T ss_pred             --CCCEEeC-CCCCCCCcccCCCCCCCC-CCCCCCCCEEcCCCCCCc
Confidence              4589999 79999875 3 7999986 233966 789986 5544

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.99  E-value=8.3e-10  Score=94.35  Aligned_cols=132  Identities=22%  Similarity=0.419  Sum_probs=58.1

Q ss_pred             CCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCCCcceeecCCCc
Q psy11797         42 KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECERGF  120 (249)
Q Consensus        42 ~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~  120 (249)
                      +++|.+   .|.|.|++||+|..++.                       +.|.   .+|. +|.|++   .+.|.|++||
T Consensus       158 ~G~C~~---~~~C~C~~G~~G~~C~~-----------------------~~C~---~~C~~~G~C~~---~~~C~C~~G~  205 (324)
T 2ygq_A          158 GGFCNE---RRICECPDGFHGPHCEK-----------------------ALCT---PRCMNGGLCVT---PGFCICPPGF  205 (324)
T ss_dssp             SCEECT---TSCEECCTTEESSSSCE-----------------------ESSS---SCCCTTCEECS---SCCEECCTTC
T ss_pred             CCEECC---CCeEECCCCCcCCCCCC-----------------------CCCC---CCCCCCCEEcC---CCEEeCCCCc
Confidence            367754   58999999999977651                       2354   3576 568875   4689999999


Q ss_pred             eeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCccCCCCcceeecCCCCccCCCC
Q psy11797        121 KLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQC  200 (249)
Q Consensus       121 ~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~~~~~~~C~C~~g~~~g~~C  200 (249)
                      .    |..|+.. .                | ..+|.++++|..   .+.|.|.+||.+.... ...|.  .....++.|
T Consensus       206 ~----G~~C~~~-~----------------C-~~~C~~~G~C~~---~~~C~C~~G~~G~~C~-~~~C~--~~C~~~g~C  257 (324)
T 2ygq_A          206 Y----GVNCDKA-N----------------C-STTCFNGGTCFY---PGKCICPPGLEGEQCE-ISKCP--QPCRNGGKC  257 (324)
T ss_dssp             B----TTTTCBC-C----------------C-SSCCCSSCCBSC---SSCBCCCTTCCTTTTC-----------------
T ss_pred             c----CCCcccC-c----------------C-CCCCCCCCeeCC---CCeeeCCCCccCCCCC-cCcCC--CcCCCCCEE
Confidence            8    7777651 1                1 134667788865   3678888888876421 23332  222224455


Q ss_pred             ccCCCCCCchhhccCCCCCccCCCCCCcccccCCCCC-CCCcccc
Q psy11797        201 QLCPTRGSQEYTDLCLESGLTVDGRDIDECVTIPAVE-SSKLAKM  244 (249)
Q Consensus       201 ~~C~~~~~~~~~c~Cp~~G~~~~~~dideC~~~~~~C-~ng~c~~  244 (249)
                          .   +.++|.| .+||+|+.-++++|. .  .| .+|.|++
T Consensus       258 ----~---~~~~C~C-~~G~~G~~C~~~~C~-~--~C~~~g~C~~  291 (324)
T 2ygq_A          258 ----I---GKSKCKC-SKGYQGDLCSKPVCE-P--GCGAHGTCHE  291 (324)
T ss_dssp             ---------------------------------------------
T ss_pred             ----C---CCCEEEC-CCCCcCCCCcCCCCC-C--CCCCCCEECC
Confidence                1   2467888 688888655566775 2  37 4567764

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.98  E-value=9.7e-10  Score=102.25  Aligned_cols=111  Identities=22%  Similarity=0.458  Sum_probs=73.9

Q ss_pred             ccCCCCCCCCCCceecCCCee---eecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCC--CCCC-CCeee
Q psy11797         33 ECRTPANTCKFSCKNLIGSYM---CTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNL--DSCA-NGRCV  106 (249)
Q Consensus        33 ~C~~~~~~c~~~C~n~~gsy~---C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~--~~C~-~g~C~  106 (249)
                      +|...++...+.|.+..|+|.   |.|++||+|..|+..           .+....  ...++|...+  .+|. +|.|+
T Consensus       436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~-----------~~~~~~--~~~~~C~~~~~~~~Cs~~G~C~  502 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECS-----------EEDYRP--SQQDECSPREGQPVCSQRGECL  502 (690)
T ss_dssp             GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCS-----------CC--------CCCCSSSSSSCGGGGSEEEC
T ss_pred             CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeec-----------cCccCC--ccCCcCCCCCCCCCCCCCCEEE
Confidence            566666666689988888898   999999999888621           110000  1225566422  3587 67997


Q ss_pred             eCCCcceeecC----CCceeCCCCCCccc-CCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCccC
Q psy11797        107 NLEGSYRCECE----RGFKLSLDGKQCLG-KGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLM  181 (249)
Q Consensus       107 ~~~g~~~C~C~----~G~~~~~~g~~C~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~  181 (249)
                      +    +.|.|+    +||.    |..|+. +..|..             -...+|.+++.|..    +.|.|.+||.+..
T Consensus       503 ~----g~C~C~~~~~~Gy~----G~~Ce~~~~~C~~-------------~~~~~C~~~G~C~~----g~C~C~~Gy~G~~  557 (690)
T 3fcs_B          503 C----GQCVCHSSDFGKIT----GKYCECDDFSCVR-------------YKGEMCSGHGQCSC----GDCLCDSDWTGYY  557 (690)
T ss_dssp             S----SSEEECCCSSCCCB----STTSCBCSSCCCB-------------SSSSBGGGSEEEET----TEEEECTTEESSS
T ss_pred             C----CeeEeecCCCCCee----CCCcCcccCcCcC-------------CCCCCCCCCCEecC----CeeECcCCCcCCC
Confidence            4    689999    9998    889963 333321             01134677788865    7899999998875

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.82  E-value=3.1e-09  Score=77.00  Aligned_cols=84  Identities=25%  Similarity=0.585  Sum_probs=54.3

Q ss_pred             eecCcccccCC------CCCC-CCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCcc
Q psy11797         87 CVDVNECELNL------DSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRL  159 (249)
Q Consensus        87 C~~i~~C~~~~------~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (249)
                      ++|+++|+..+      ..|. ++.|+++.++|+|.|++||.    |..|+++.+.             +.|...+....
T Consensus         3 ~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~----G~~C~~~~~~-------------~~C~~~~~~C~   65 (114)
T 1aut_L            3 HVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWE----GRFCQREVSF-------------LNCSLDNGGCT   65 (114)
T ss_dssp             -----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEE----STTSCEECCS-------------SSSSSGGGGCS
T ss_pred             ceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCc----CCCcCcCCcC-------------CcCcCCCCCCC
Confidence            46888888633      2277 56999999999999999998    7888874321             11211111223


Q ss_pred             ccccccCCCCcccCCCCCCccCCCCcceee
Q psy11797        160 GFCYRSLTNGRCVLPTGPALLMEVTRMDCC  189 (249)
Q Consensus       160 ~~C~~~~~~~~C~c~~g~~~~~~~~~~~C~  189 (249)
                      .+|++..++|+|.|..||++.  .....|.
T Consensus        66 ~~C~n~~g~y~C~C~~G~~~~--~~g~~C~   93 (114)
T 1aut_L           66 HYCLEEVGWRRCSCAPGYKLG--DDLLQCH   93 (114)
T ss_dssp             SEEEECSSSEEEECCTTEEEC--TTSSCEE
T ss_pred             CEeECCCCCEEeECCCCeeEC--CCCCccC
Confidence            389999999999999999876  3334453

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.81  E-value=2.8e-09  Score=74.01  Aligned_cols=68  Identities=25%  Similarity=0.527  Sum_probs=52.8

Q ss_pred             CCCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCC-CeeeeC
Q psy11797         30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCAN-GRCVNL  108 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~-g~C~~~  108 (249)
                      ++++|...      .|++..++|+|.|++||+  .++.                    .++++|..  ++|.+ |.|+++
T Consensus        16 ~~~~c~~~------pC~n~~~~y~C~C~~G~~--~C~~--------------------~~~~~C~~--~pC~ngg~C~~~   65 (91)
T 1tpg_A           16 QQHQSWLR------PVLRSNRVEYCWCNSGRA--QCHS--------------------VPVKSCSE--PRCFNGGTCQQA   65 (91)
T ss_dssp             CSSCEEEE------ECSSSSCEEEEECSSSCC--BCCE--------------------ECEEECSS--CCSCTTCEEEEE
T ss_pred             CCCcccCC------ccccCCCCcEeECCCCCc--cccc--------------------CcCCcccC--CCCCCCCEeecC
Confidence            45666543      366778899999999996  3320                    37889985  78994 699998


Q ss_pred             C--CcceeecCCCceeCCCCCCccc
Q psy11797        109 E--GSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus       109 ~--g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .  ++|+|.|++||.    |++|+.
T Consensus        66 ~~~~~~~C~C~~G~~----G~~Ce~   86 (91)
T 1tpg_A           66 LYFSDFVCQCPEGFA----GKSCEI   86 (91)
T ss_dssp             SSSSCEEEECCTTCB----SSSCCB
T ss_pred             CCCCCeEeECCCCCc----CCcCCc
Confidence            7  999999999998    889973

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.81  E-value=5.2e-09  Score=79.13  Aligned_cols=74  Identities=32%  Similarity=0.588  Sum_probs=53.7

Q ss_pred             CceecCcccccCCCCCCC-CeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccc-
Q psy11797         85 HECVDVNECELNLDSCAN-GRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFC-  162 (249)
Q Consensus        85 ~~C~~i~~C~~~~~~C~~-g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C-  162 (249)
                      ..|++|++|..  ++|.+ +.|+++.++|.|.|++||.    |..|+++++|...              ..+|.  .+| 
T Consensus        43 ~~c~dideC~~--~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~--------------~~~C~--~~C~  100 (146)
T 1x7a_L           43 KQYVDGDQCEP--NPCLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIK--------------NGRCK--QFCK  100 (146)
T ss_dssp             -------CCSS--CSSCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSG--------------GGSCS--SBCC
T ss_pred             ccCCCcCcCCC--CCCCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCC--------------CCCCc--CCCC
Confidence            45789999984  78994 6999999999999999999    8899886665421              11233  389 


Q ss_pred             cccCCCCcccCCCCCCcc
Q psy11797        163 YRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       163 ~~~~~~~~C~c~~g~~~~  180 (249)
                      .+..++|+|.|++||.+.
T Consensus       101 ~n~~g~y~C~C~~Gy~l~  118 (146)
T 1x7a_L          101 TGADSKVLCSCTTGYRLA  118 (146)
T ss_dssp             CCSSSCCCCBCCTTEEEC
T ss_pred             CCCCCCEEeEcCCCcEeC
Confidence            888999999999999865

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.77  E-value=2.4e-08  Score=93.86  Aligned_cols=73  Identities=25%  Similarity=0.496  Sum_probs=59.7

Q ss_pred             cCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCC
Q psy11797         89 DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTN  168 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~  168 (249)
                      +++||....+.|.+ .|++++++|+|.|++||.+ .+++.|+++++|...               .+|  .+.|.+..++
T Consensus       293 ~~~eC~~~~~~C~~-~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~---------------~~C--~~~C~n~~g~  353 (699)
T 1n7d_A          293 GTNECLDNNGGCSH-VCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDP---------------DTC--SQLCVNLEGG  353 (699)
T ss_dssp             CCCCTTSSTTTSCT-TCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSS---------------SSC--TTTCCBCSSC
T ss_pred             ccccccccccCcCC-CcccCCCCcEEeCCCCeEc-CCCCcccCccccCCC---------------Ccc--ccccccCCCC
Confidence            57788765566765 8999999999999999998 678899998888521               123  3589999999


Q ss_pred             CcccCCCCCCcc
Q psy11797        169 GRCVLPTGPALL  180 (249)
Q Consensus       169 ~~C~c~~g~~~~  180 (249)
                      |+|.|.+||.+.
T Consensus       354 y~C~C~~G~~~~  365 (699)
T 1n7d_A          354 YKCQCEEGFQLD  365 (699)
T ss_dssp             BCCCCCSSCBCC
T ss_pred             eeeeeecccccC
Confidence            999999999876

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.73  E-value=1e-08  Score=87.57  Aligned_cols=115  Identities=23%  Similarity=0.496  Sum_probs=39.8

Q ss_pred             CCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCCCcceeecCCCc
Q psy11797         42 KFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECERGF  120 (249)
Q Consensus        42 ~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~  120 (249)
                      +++|++   .+.|.|++||+|..++.                       +.|.   .+|. +|.|++   .+.|.|++||
T Consensus       190 ~G~C~~---~~~C~C~~G~~G~~C~~-----------------------~~C~---~~C~~~G~C~~---~~~C~C~~G~  237 (324)
T 2ygq_A          190 GGLCVT---PGFCICPPGFYGVNCDK-----------------------ANCS---TTCFNGGTCFY---PGKCICPPGL  237 (324)
T ss_dssp             TCEECS---SCCEECCTTCBTTTTCB-----------------------CCCS---SCCCSSCCBSC---SSCBCCCTTC
T ss_pred             CCEEcC---CCEEeCCCCccCCCccc-----------------------CcCC---CCCCCCCeeCC---CCeeeCCCCc
Confidence            467754   47899999999976651                       2354   4677 568876   3789999999


Q ss_pred             eeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCccCCCCcceeecCCCCccCCCC
Q psy11797        121 KLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTMGMAWGPQC  200 (249)
Q Consensus       121 ~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~~~~~~~C~C~~g~~~g~~C  200 (249)
                      .    |..|+. ++|                . .+|.+++.|..   .+.|.|.+||.+.... ...|.  .....++.|
T Consensus       238 ~----G~~C~~-~~C----------------~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~-~~~C~--~~C~~~g~C  289 (324)
T 2ygq_A          238 E----GEQCEI-SKC----------------P-QPCRNGGKCIG---KSKCKCSKGYQGDLCS-KPVCE--PGCGAHGTC  289 (324)
T ss_dssp             C----TTTTC----------------------------------------------------------------------
T ss_pred             c----CCCCCc-CcC----------------C-CcCCCCCEECC---CCEEECCCCCcCCCCc-CCCCC--CCCCCCCEE
Confidence            8    888864 222                1 34677788874   5789999999877421 23342  222224455


Q ss_pred             ccCCCCCCchhhccCCCCCccCCC
Q psy11797        201 QLCPTRGSQEYTDLCLESGLTVDG  224 (249)
Q Consensus       201 ~~C~~~~~~~~~c~Cp~~G~~~~~  224 (249)
                          .   ..++|.| .+||+|..
T Consensus       290 ----~---~~~~C~C-~~G~~G~~  305 (324)
T 2ygq_A          290 ----H---EPNKCQC-QEGWHGRH  305 (324)
T ss_dssp             ------------------------
T ss_pred             ----C---CCCEeEC-CCCCcCCC
Confidence                2   2478999 79999853

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.72  E-value=1.3e-08  Score=76.66  Aligned_cols=73  Identities=29%  Similarity=0.559  Sum_probs=55.7

Q ss_pred             ceecCcccccCCCCCCC-CeeeeCCCcceeecCCCceeCCCCCCccc-CCCccceeeeecCCcccccccCCCCCccc---
Q psy11797         86 ECVDVNECELNLDSCAN-GRCVNLEGSYRCECERGFKLSLDGKQCLG-KGQFVEFRIILSMPKAENSVNNNNNQRLG---  160 (249)
Q Consensus        86 ~C~~i~~C~~~~~~C~~-g~C~~~~g~~~C~C~~G~~~~~~g~~C~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  160 (249)
                      .|.++++|..  ++|.+ |.|+++.++|+|.|++||.    |+.|++ ++++                ...++.+.+   
T Consensus        43 ~c~did~C~~--~pC~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c----------------~~c~~~~~~C~~  100 (142)
T 2c4f_L           43 SYSDGDQCAS--SPCQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQ----------------LICVNENGGCEQ  100 (142)
T ss_dssp             HHTTCCGGGG--CCCCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGC----------------CSTTTGGGGCSS
T ss_pred             cCCccCcCcC--CCcCCCCEEeCCCCCEEeeCCCCcc----CCccccCcccc----------------ccccCCCCCccC
Confidence            4678999985  78994 6999999999999999998    888976 3332                111222233   


Q ss_pred             cccccCC-CCcccCCCCCCcc
Q psy11797        161 FCYRSLT-NGRCVLPTGPALL  180 (249)
Q Consensus       161 ~C~~~~~-~~~C~c~~g~~~~  180 (249)
                      +|.+..+ +|+|.|+.||.+.
T Consensus       101 ~C~~~~g~~y~C~C~~Gy~l~  121 (142)
T 2c4f_L          101 YCSDHTGTKRSCRCHEGYSLL  121 (142)
T ss_dssp             EEECCTTSCCEEECCTTEEEC
T ss_pred             EeECCCCCCEEEECCCCceEC
Confidence            8888888 8999999998755

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.72  E-value=6.2e-09  Score=68.14  Aligned_cols=52  Identities=25%  Similarity=0.519  Sum_probs=45.7

Q ss_pred             ecCcccccCCCCCCCCeeeeCCC-cceeecCCCceeCCCCCCcccCCCccceee
Q psy11797         88 VDVNECELNLDSCANGRCVNLEG-SYRCECERGFKLSLDGKQCLGKGQFVEFRI  140 (249)
Q Consensus        88 ~~i~~C~~~~~~C~~g~C~~~~g-~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~  140 (249)
                      +|+++|....+.|.+ .|++++| +|.|.|++||.|..++++|.++++|..+++
T Consensus         3 ~d~~eC~~~nggC~h-~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~Cg~~   55 (69)
T 1kli_L            3 DDQLICVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGKI   55 (69)
T ss_dssp             SCCCCTTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTTCC
T ss_pred             cccccccCCCCCcCC-EeEcCCCCCEEEeCCCCCeECCCCCcccCcccccCCCc
Confidence            688999876678987 8999999 899999999999999999999998875543

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.70  E-value=7.2e-09  Score=64.85  Aligned_cols=49  Identities=29%  Similarity=0.672  Sum_probs=41.5

Q ss_pred             cccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceee
Q psy11797         91 NECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRI  140 (249)
Q Consensus        91 ~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~  140 (249)
                      |||....+.|.+ .|+|++|+|+|.|++||.|..++++|+++++|+.++.
T Consensus         2 dEC~~~~~~C~~-~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~cg~~   50 (55)
T 2jkh_L            2 KLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQ   50 (55)
T ss_dssp             CCTTTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCTTCC
T ss_pred             ccccCCCCCcCc-EeEcCCCCeEEeCCCCCEECCCCCeeccCccccCCCc
Confidence            567654567876 8999999999999999999999999999988865543

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.68  E-value=8.5e-09  Score=79.92  Aligned_cols=113  Identities=20%  Similarity=0.380  Sum_probs=72.5

Q ss_pred             CeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCC--CCCeeeeCCCcceeecCCCceeCCCCCC
Q psy11797         51 SYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSC--ANGRCVNLEGSYRCECERGFKLSLDGKQ  128 (249)
Q Consensus        51 sy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C--~~g~C~~~~g~~~C~C~~G~~~~~~g~~  128 (249)
                      ...|.|++||+|..++                       +++|.   ..|  .+|.|++   .|.|.|++||.    |..
T Consensus        49 ~g~C~C~~G~~G~~C~-----------------------~~~C~---~~C~~~~g~C~~---~~~C~C~~G~~----G~~   95 (169)
T 2vj2_A           49 NGNKTCMEGWMGPECN-----------------------RAICR---QGCSPKHGSCKL---PGDCRCQYGWQ----GLY   95 (169)
T ss_dssp             SCCEEECTTEESTTSC-----------------------EECCC---TTCCTTTEECSS---TTCCEECTTEE----SSS
T ss_pred             CCeeECCCCCcCCCCC-----------------------CCCCC---CCCCCCCcccCC---CCeeECCCCCC----CCC
Confidence            3578999999987665                       12354   234  4677875   58999999999    777


Q ss_pred             cccCCCccceeeeecCCcccccccCCC-CCccccccccCCCCcccCCCCCCccCCC-CcceeecCCCCccCCCCccCCCC
Q psy11797        129 CLGKGQFVEFRIILSMPKAENSVNNNN-NQRLGFCYRSLTNGRCVLPTGPALLMEV-TRMDCCCTMGMAWGPQCQLCPTR  206 (249)
Q Consensus       129 C~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~C~c~~g~~~~~~~-~~~~C~C~~g~~~g~~C~~C~~~  206 (249)
                      |+.   +                ...+ |.+ ++|.   +.|+|.|.+||++.... ..++|.-......++.|.   ..
T Consensus        96 C~~---C----------------~~~~~C~~-g~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~---~~  149 (169)
T 2vj2_A           96 CDK---C----------------IPHPGCVH-GICN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCS---NT  149 (169)
T ss_dssp             SCE---E----------------CCCTTCSS-EECS---STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEE---EC
T ss_pred             ccc---C----------------CCCCCCCC-CCcC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEc---CC
Confidence            753   1                1111 343 4776   47899999999887532 455554211122244552   22


Q ss_pred             CCchhhccCCCCCccCC
Q psy11797        207 GSQEYTDLCLESGLTVD  223 (249)
Q Consensus       207 ~~~~~~c~Cp~~G~~~~  223 (249)
                      ..++|+|.| ++||+|+
T Consensus       150 ~~~~~~C~C-~~G~~G~  165 (169)
T 2vj2_A          150 GPDKYQCSC-PEGYSGP  165 (169)
T ss_dssp             STTCEEEEC-CTTCCST
T ss_pred             CCCCcEeEC-CCCCcCc
Confidence            356699999 7999985

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.65  E-value=1.2e-07  Score=88.24  Aligned_cols=100  Identities=23%  Similarity=0.422  Sum_probs=65.7

Q ss_pred             CccCCCC--CCC--CCCceecCCCeeeecC----CCccccCCCcccccccCCccccCCCCCCceecCcccccC-CCCCC-
Q psy11797         32 DECRTPA--NTC--KFSCKNLIGSYMCTCP----PGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELN-LDSCA-  101 (249)
Q Consensus        32 d~C~~~~--~~c--~~~C~n~~gsy~C~C~----~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~-~~~C~-  101 (249)
                      ++|...+  ..|  .++|++    +.|.|+    +||+|..|+                     .++++|... ..+|. 
T Consensus       484 ~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce---------------------~~~~~C~~~~~~~C~~  538 (690)
T 3fcs_B          484 DECSPREGQPVCSQRGECLC----GQCVCHSSDFGKITGKYCE---------------------CDDFSCVRYKGEMCSG  538 (690)
T ss_dssp             CCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCCBSTTSC---------------------BCSSCCCBSSSSBGGG
T ss_pred             CcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCeeCCCcC---------------------cccCcCcCCCCCCCCC
Confidence            5566532  123  367763    689999    999997776                     356677632 24687 


Q ss_pred             CCeeeeCCCcceeecCCCceeCCCCCCcc---cCCCccceeeeecCCcccccccCCCCCccccccccCCCCcccC-CCCC
Q psy11797        102 NGRCVNLEGSYRCECERGFKLSLDGKQCL---GKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVL-PTGP  177 (249)
Q Consensus       102 ~g~C~~~~g~~~C~C~~G~~~~~~g~~C~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c-~~g~  177 (249)
                      +|.|++    +.|.|++||.    |..|+   .++.|..             -...+|.+.+.|..    +.|.| .+||
T Consensus       539 ~G~C~~----g~C~C~~Gy~----G~~CeC~~~~~~C~~-------------~~g~~C~~~G~C~~----g~C~C~~~Gy  593 (690)
T 3fcs_B          539 HGQCSC----GDCLCDSDWT----GYYCNCTTRTDTCMS-------------SNGLLCSGRGKCEC----GSCVCIQPGS  593 (690)
T ss_dssp             SEEEET----TEEEECTTEE----SSSSCEECCCTTTBC-------------TTSSBTSSSCEEET----TEEECCSTTC
T ss_pred             CCEecC----CeeECcCCCc----CCCCccCCCCCcccC-------------CCCCCCCCCCEEeC----CEEECCCCCc
Confidence            679976    7999999999    88887   2222211             01145677788864    36888 7777


Q ss_pred             CccC
Q psy11797        178 ALLM  181 (249)
Q Consensus       178 ~~~~  181 (249)
                      .+..
T Consensus       594 ~G~~  597 (690)
T 3fcs_B          594 YGDT  597 (690)
T ss_dssp             BSTT
T ss_pred             cCCC
Confidence            7664

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.64  E-value=1.1e-08  Score=76.14  Aligned_cols=61  Identities=23%  Similarity=0.435  Sum_probs=29.9

Q ss_pred             CCCccCcccCCCCCCCCcceeeC-----------------CC-C-CccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797          6 FICSDVDECRTPANTCKFSCKNL-----------------ID-V-DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus         6 ~~C~di~eC~~~~~~c~~~C~~~-----------------~d-i-d~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ..|.|||+|+++||.++++|+++                 .+ | |+|...++.|..+|+++.++|+|.|++||++....
T Consensus        37 ~~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g  116 (134)
T 2vh0_B           37 NKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG  116 (134)
T ss_dssp             --------------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTS
T ss_pred             ccCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCC
Confidence            35899999999999888899876                 23 6 88988777788899999999999999999965544

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.60  E-value=5.3e-08  Score=92.55  Aligned_cols=80  Identities=24%  Similarity=0.481  Sum_probs=61.3

Q ss_pred             cCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCC
Q psy11797         89 DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTN  168 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~  168 (249)
                      ++++|....+.|.+ .|++++++|.|.|++||.+ .+++.|+++++|..               .  ....+.|.+..++
T Consensus       311 ~~~~C~~~~~~C~~-~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~---------------~--~~C~~~C~n~~gs  371 (791)
T 3m0c_C          311 GTNECLDNNGGCSH-VCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD---------------P--DTCSQLCVNLEGG  371 (791)
T ss_dssp             SCCSTTTGGGGCSS-EEEECSBSEEEECCTTCEE-ETTTEEECCCCCSS---------------S--SSCTTTCCBCSSC
T ss_pred             ccccccccccCccc-cccCCCCCcccCCCCCCcc-CCCCccccCcccCC---------------C--CCCCCeeecCCCC
Confidence            46677654455665 8999999999999999998 56899999888841               1  1234689999999


Q ss_pred             CcccCCCCCCccCCCCcceee
Q psy11797        169 GRCVLPTGPALLMEVTRMDCC  189 (249)
Q Consensus       169 ~~C~c~~g~~~~~~~~~~~C~  189 (249)
                      |+|.|..||.+.  .+...|.
T Consensus       372 y~C~C~~Gy~l~--~~~~~C~  390 (791)
T 3m0c_C          372 YKCQCEEGFQLD--PHTKACK  390 (791)
T ss_dssp             BCCCCCSSEECC--SSCCCCE
T ss_pred             ceeecCCCCEeC--CCCceee
Confidence            999999999875  3444443

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=98.60  E-value=2.6e-08  Score=62.21  Aligned_cols=46  Identities=20%  Similarity=0.543  Sum_probs=39.1

Q ss_pred             CCccCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccc
Q psy11797         31 VDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECE   94 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~   94 (249)
                      .|||...+..|.+.|+|++|+|.|.|++||++....                  .+|+++++|.
T Consensus         1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~------------------~~C~didec~   46 (55)
T 2jkh_L            1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG------------------KACIPTGPYP   46 (55)
T ss_dssp             -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTS------------------SCEEESSSSC
T ss_pred             CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCC------------------CeeccCcccc
Confidence            378887777788899999999999999999987665                  7899999875

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.59  E-value=8.1e-09  Score=90.30  Aligned_cols=81  Identities=26%  Similarity=0.553  Sum_probs=18.0

Q ss_pred             cCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCC
Q psy11797         89 DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTN  168 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~  168 (249)
                      +++||...+..|.+ .|++..++|.|.|++||.+..++++|+++++|...               .+|.  ..|.+..++
T Consensus         2 ~~~~C~~~~~~c~~-~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~---------------~~C~--~~C~~~~g~   63 (386)
T 3v65_B            2 GEENCNVNNGGCAQ-KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEE---------------GYCS--QGCTNSEGA   63 (386)
T ss_dssp             ------------------------------------------------------------------CCT--TEEC-----
T ss_pred             CcCcccCCCCCCCC-CCcCCCCCcEeECCCCceECCCCCccCccceeCCc---------------Cccc--CcCCCCCCC
Confidence            68899876667876 89999999999999999998889999998888521               1233  349999999


Q ss_pred             CcccCCCCCCccCCCCcceee
Q psy11797        169 GRCVLPTGPALLMEVTRMDCC  189 (249)
Q Consensus       169 ~~C~c~~g~~~~~~~~~~~C~  189 (249)
                      |.|.|.+||.+.  .+...|.
T Consensus        64 ~~C~C~~g~~l~--~d~~~C~   82 (386)
T 3v65_B           64 FQCWCEAGYELR--PDRRSCK   82 (386)
T ss_dssp             CCEECCTTEEEC--TTSSCEE
T ss_pred             CeEEECCCceEc--CCCCeEC
Confidence            999999999865  4445564

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.59  E-value=7.1e-09  Score=81.90  Aligned_cols=81  Identities=28%  Similarity=0.574  Sum_probs=24.9

Q ss_pred             CceecCcccccCCCCCCC-CeeeeCCCcceeecCCCceeCCCCCCccc-C-CCccceeeeecCCcccccccCCCCCcccc
Q psy11797         85 HECVDVNECELNLDSCAN-GRCVNLEGSYRCECERGFKLSLDGKQCLG-K-GQFVEFRIILSMPKAENSVNNNNNQRLGF  161 (249)
Q Consensus        85 ~~C~~i~~C~~~~~~C~~-g~C~~~~g~~~C~C~~G~~~~~~g~~C~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (249)
                      ..|.++++|..  ++|.+ |.|+++.++|.|.|++||.    |+.|+. + ++|...              ..+|.  ..
T Consensus        37 ~~c~dideC~~--~pC~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~--------------~~~C~--~~   94 (195)
T 1nfu_B           37 NKYKDGDQCET--SPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLD--------------NGDCD--QF   94 (195)
T ss_dssp             --------------------------------------------------CCGGGTG--------------GGGCS--SE
T ss_pred             ccCCCCcccCC--CCCCCCCEeECCCCCeeEeCCCCce----eccccccccccccCC--------------CCCCC--CE
Confidence            35789999984  78994 6999999999999999998    889986 3 555321              11233  38


Q ss_pred             ccccCCCCcccCCCCCCccCCCCcceee
Q psy11797        162 CYRSLTNGRCVLPTGPALLMEVTRMDCC  189 (249)
Q Consensus       162 C~~~~~~~~C~c~~g~~~~~~~~~~~C~  189 (249)
                      |.+..++|.|.|+.||.+.  .+...|.
T Consensus        95 C~n~~gsy~C~C~~Gy~l~--~dG~~C~  120 (195)
T 1nfu_B           95 CHEEQNSVVCSCARGYTLA--DNGKACI  120 (195)
T ss_dssp             EEEETTEEEEECCTTEEEC--TTSSCEE
T ss_pred             eECCCCCeEEECCCCceeC--CCCCccc
Confidence            9999999999999999855  3334453

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.57  E-value=6e-08  Score=85.18  Aligned_cols=78  Identities=24%  Similarity=0.506  Sum_probs=59.6

Q ss_pred             cccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCCCCccccccccCCCCc
Q psy11797         91 NECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGR  170 (249)
Q Consensus        91 ~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~  170 (249)
                      +||...+..|.+ .|++++++|.|.|++||.+ .+++.|+++++|..               ..+|.  ..|.+..++|.
T Consensus         1 ~eC~~~~~~c~~-~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~---------------~~~C~--~~C~n~~g~~~   61 (400)
T 3p5b_L            1 NECLDNNGGCSH-VCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD---------------PDTCS--QLCVNLEGGYK   61 (400)
T ss_dssp             CCTTTTGGGCSS-EEEECSSSEEEECCTTEEE-CSSSCEEECCCCST---------------TSSCS--SCCBCCSSSCB
T ss_pred             CcccCCCCCCCC-EeECCCCCeEEECCCCCCc-CCCCcccCchhhhc---------------cCCCC--CccCCCcccee
Confidence            467654445654 8999999999999999998 57899999888842               12233  48999999999


Q ss_pred             ccCCCCCCccCCCCcceee
Q psy11797        171 CVLPTGPALLMEVTRMDCC  189 (249)
Q Consensus       171 C~c~~g~~~~~~~~~~~C~  189 (249)
                      |.|..||.+.  .....|.
T Consensus        62 C~C~~g~~~~--~~~~~C~   78 (400)
T 3p5b_L           62 CQCEEGFQLD--PHTKACK   78 (400)
T ss_dssp             CCCCTTCCCC--TTTSSCC
T ss_pred             eecccccccc--cccccee
Confidence            9999999876  3444453

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=98.55  E-value=4.6e-08  Score=63.95  Aligned_cols=48  Identities=23%  Similarity=0.494  Sum_probs=41.6

Q ss_pred             CCCCccCCCCCCCCCCceecCC-CeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccc
Q psy11797         29 IDVDECRTPANTCKFSCKNLIG-SYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECE   94 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~g-sy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~   94 (249)
                      +|+|+|......|...|+|++| +|.|.|++||++....                  ++|+++++|.
T Consensus         3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~------------------~tC~d~dec~   51 (69)
T 1kli_L            3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG------------------VSCTPTVEYP   51 (69)
T ss_dssp             SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTS------------------SCEEECSSSC
T ss_pred             cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCC------------------CcccCccccc
Confidence            4788888777788899999999 8999999999987766                  7899999875

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=98.49  E-value=5.4e-08  Score=59.74  Aligned_cols=42  Identities=26%  Similarity=0.598  Sum_probs=36.5

Q ss_pred             CCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCcccee
Q psy11797         97 LDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFR  139 (249)
Q Consensus        97 ~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~  139 (249)
                      .+.|.+ .|+|++|+|+|.|++||.|..++++|+++++|...+
T Consensus         5 ng~C~~-~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~pCg~   46 (51)
T 1kig_L            5 NGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFPCGK   46 (51)
T ss_dssp             TTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSSCTTC
T ss_pred             CCCcCC-EeEcCCCCeEEeCCCCcEECCCCCccccCCcccCCC
Confidence            466776 799999999999999999999999999988876443

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.49  E-value=1e-07  Score=55.05  Aligned_cols=38  Identities=34%  Similarity=0.644  Sum_probs=31.1

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +|+|+|...++..+++|++..++|+|.|++||+|..++
T Consensus         1 ~d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             CccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence            36778877777777888888999999999999987654

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.42  E-value=1.2e-07  Score=58.63  Aligned_cols=42  Identities=24%  Similarity=0.593  Sum_probs=36.6

Q ss_pred             CCCCCCCeeeeCCC-cceeecCCCceeCCCCCCcccCCCcccee
Q psy11797         97 LDSCANGRCVNLEG-SYRCECERGFKLSLDGKQCLGKGQFVEFR  139 (249)
Q Consensus        97 ~~~C~~g~C~~~~g-~~~C~C~~G~~~~~~g~~C~~~~~~~~~~  139 (249)
                      .+.|.+ .|+++.+ +|+|.|++||.|..++++|+++++|..++
T Consensus         6 nggC~~-~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~cg~   48 (53)
T 2bz6_L            6 NGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCGK   48 (53)
T ss_dssp             GGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTTC
T ss_pred             CCCcCC-EeEcCCCCCEEeeCCCCCEECCCCCcccCCccccCCC
Confidence            456776 8999999 79999999999999999999999886554

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.37  E-value=3.5e-07  Score=56.49  Aligned_cols=38  Identities=37%  Similarity=1.041  Sum_probs=30.2

Q ss_pred             CCCCccCCC--------CCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         29 IDVDECRTP--------ANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        29 ~did~C~~~--------~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +|||||...        ...|.++|+|++|+|.|.|++||++....
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~   47 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDR   47 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTS
T ss_pred             CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCC
Confidence            367777653        25677899999999999999999986544

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.36  E-value=4.1e-07  Score=56.15  Aligned_cols=43  Identities=35%  Similarity=0.841  Sum_probs=36.4

Q ss_pred             ecCcccccC--------CCCCCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         88 VDVNECELN--------LDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        88 ~~i~~C~~~--------~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ++|+||...        ..+|.+ .|+|++|+|+|.|++||.+..++++|.+
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~   52 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQH-LCHNYVGGYFCSCRPGYELQEDRHSCQA   52 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSS-EEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred             CccccccCcccccccccCCCCCC-EeECCCCCeEEECCCCCeECCCCCccCC
Confidence            478899763        267875 9999999999999999999888888864

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=98.31  E-value=3.9e-07  Score=55.84  Aligned_cols=43  Identities=23%  Similarity=0.567  Sum_probs=35.4

Q ss_pred             cCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccc
Q psy11797         34 CRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECE   94 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~   94 (249)
                      |...+..|.+.|+|++|+|+|.|++||++....                  ++|++++|+.
T Consensus         1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~------------------~tC~dide~p   43 (51)
T 1kig_L            1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDS------------------KSCVSTERFP   43 (51)
T ss_dssp             CCTTTTSSSSCCCEETTEECCCCCTTEEECTTS------------------SCEEECSSSC
T ss_pred             CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCC------------------CccccCCccc
Confidence            344556788899999999999999999987766                  7899998763

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.30  E-value=1e-06  Score=77.83  Aligned_cols=107  Identities=23%  Similarity=0.425  Sum_probs=63.3

Q ss_pred             CCC-CCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCccccccc-CCCCCccccccccCCCCcccCCCC
Q psy11797         99 SCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVN-NNNNQRLGFCYRSLTNGRCVLPTG  176 (249)
Q Consensus        99 ~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~C~~~~~~~~C~c~~g  176 (249)
                      +|. +|.|.+  +.+.|.|++||.    |..|+..  |.+.....  ++ ...|. ..+|.+.+.|.  .+.|.|.|.+|
T Consensus       204 ~C~~~G~C~~--~~g~C~C~~G~~----G~~Ce~~--C~~g~~g~--~C-~~~C~~~~~C~~~g~C~--~~~~~C~C~~G  270 (423)
T 2gy5_A          204 ACMNNGVCHE--DTGECICPPGFM----GRTCEKA--CELHTFGR--TC-KERCSGQEGCKSYVFCL--PDPYGCSCATG  270 (423)
T ss_dssp             CCCTTCEECT--TTCCEECCTTEE----STTSCEE--CCTTEEST--TS-CEECCSTTTTTTCCEEE--TTTTEEECCBT
T ss_pred             CCCCCCEEEC--CCCcEeCCCCcc----CCCcccc--cCCCCCCC--Cc-CccCCCCCCCCCCCEEC--CCCCeEEeCCC
Confidence            677 579976  568999999999    8889751  11111100  00 01222 23355556663  46899999999


Q ss_pred             CCccCCCCcceeecCCCCccCCCCc---cCCCCC--CchhhccCCCCCccCCC
Q psy11797        177 PALLMEVTRMDCCCTMGMAWGPQCQ---LCPTRG--SQEYTDLCLESGLTVDG  224 (249)
Q Consensus       177 ~~~~~~~~~~~C~C~~g~~~g~~C~---~C~~~~--~~~~~c~Cp~~G~~~~~  224 (249)
                      |.+.....    .|..||. |..|+   .|...+  ...+.|.| .+||+|..
T Consensus       271 ~~G~~C~~----~C~~G~~-G~~C~~~C~C~ngg~C~~~~~C~C-~~G~~G~~  317 (423)
T 2gy5_A          271 WKGLQCNE----ACHPGFY-GPDCKLRCSCNNGEMCDRFQGCLC-SPGWQGLQ  317 (423)
T ss_dssp             CBSGGGCB----CCCTTBC-SBTTCCBCCCTTCCEEETTTEEEC-CTTCBSTT
T ss_pred             cccccccC----ccCCCCc-CCcccccccCCCCCEecCCCceEC-CCCCcCCC
Confidence            98764211    3567764 66665   232211  12244999 79999865

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.28  E-value=5.3e-07  Score=55.99  Aligned_cols=46  Identities=15%  Similarity=0.215  Sum_probs=32.7

Q ss_pred             CCCc-cCcccCCCCCCCCcceeeCCCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797          6 FICS-DVDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus         6 ~~C~-di~eC~~~~~~c~~~C~~~~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      .+|+ +||||+++||+++++|..+.++               +..++|+|.|++||+|..++
T Consensus         2 ~~c~~~~~eC~s~pC~NgGtC~~~~~~---------------d~~~~y~C~C~~g~~G~~CE   48 (55)
T 3u7u_G            2 TSHLVKCAEKEKTFCVNGGECFMVKDL---------------SNPSRYLCKCPNEFTGDRCQ   48 (55)
T ss_dssp             -CCEEECCSTTTTTSCTTCEEEEECCC-----------------CCCEEEEECTTEESTTSC
T ss_pred             CCCcccCCCCcCCCCCCCCCcCCCCcc---------------CCCCCEeEeCCCCCcCCCcC
Confidence            4554 6777777777777777654222               34678999999999998877

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.22  E-value=8.8e-07  Score=75.21  Aligned_cols=72  Identities=24%  Similarity=0.521  Sum_probs=55.8

Q ss_pred             ecCcccccCCCCCCC-CeeeeCCCcceeecCCCceeCCCCCCcc-cCCCccceeeeecCCcccccccCCCCCcccccccc
Q psy11797         88 VDVNECELNLDSCAN-GRCVNLEGSYRCECERGFKLSLDGKQCL-GKGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRS  165 (249)
Q Consensus        88 ~~i~~C~~~~~~C~~-g~C~~~~g~~~C~C~~G~~~~~~g~~C~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~  165 (249)
                      .|+++|..  ++|.+ +.|+++.++|.|.|++||.    |+.|+ ++++|...             ...+|.+  .|.+.
T Consensus         3 ~d~~~C~~--~pC~~~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~eC~~~-------------~~~~C~~--~C~~~   61 (317)
T 3h5c_B            3 KGGSPCIS--QPCLHNGSCQDSIWGYTCTCSPGYE----GSNCELAKNECHPE-------------RTDGCQH--FCLPG   61 (317)
T ss_dssp             ---CCTTS--CCCTTTCCCCCCSSSCCCCCSSSCC----SSSSCCCSSSCCTT-------------CTTSCSS--EEECC
T ss_pred             ccCCcCCC--CCCCCCCEeECCCCCeEEECCCCCc----CCccccCcccCCCC-------------CCCCCcC--ccccC
Confidence            47788985  78994 6999999999999999998    88998 77766421             0134554  89999


Q ss_pred             CCCCcccCCCCCCcc
Q psy11797        166 LTNGRCVLPTGPALL  180 (249)
Q Consensus       166 ~~~~~C~c~~g~~~~  180 (249)
                      .++|.|.|..||.+.
T Consensus        62 ~g~~~C~C~~g~~~~   76 (317)
T 3h5c_B           62 QESYTCSCAQGYRLG   76 (317)
T ss_dssp             SSSCEEECCTTEECC
T ss_pred             CCeeEEecccccccc
Confidence            999999999999875

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.14  E-value=7.2e-07  Score=56.62  Aligned_cols=37  Identities=22%  Similarity=0.576  Sum_probs=26.8

Q ss_pred             CCCccCCCCCCCC--CCceecCCCeeeecCCCcc-ccCCC
Q psy11797         30 DVDECRTPANTCK--FSCKNLIGSYMCTCPPGYQ-QVTHS   66 (249)
Q Consensus        30 did~C~~~~~~c~--~~C~n~~gsy~C~C~~G~~-g~~~~   66 (249)
                      ++|+|.++|+..+  ++|+++.++|.|.|++||+ |..++
T Consensus        10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~   49 (61)
T 2k2s_B           10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT   49 (61)
T ss_dssp             SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred             CCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence            4455555555554  5677778999999999999 86654

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=98.14  E-value=1.3e-06  Score=53.97  Aligned_cols=43  Identities=23%  Similarity=0.607  Sum_probs=35.8

Q ss_pred             cCCCCCCCCCCceecCC-CeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccc
Q psy11797         34 CRTPANTCKFSCKNLIG-SYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECE   94 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~g-sy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~   94 (249)
                      |......|.+.|+|+.+ +|+|.|++||++....                  ++|++++||.
T Consensus         2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg------------------~tC~d~dec~   45 (53)
T 2bz6_L            2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG------------------VSCTPTVEYP   45 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTS------------------SCEEECSSSC
T ss_pred             CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCC------------------CcccCCcccc
Confidence            45555677889999999 7999999999987766                  7899999874

>1apj_A Fibrillin; microfibril, TB module, marfan syndrome, connective tissue, novel fold, extracellular matrix; NMR {Homo sapiens} SCOP: g.23.1.1

Probab=98.13  E-value=2.5e-07  Score=61.15  Aligned_cols=66  Identities=33%  Similarity=0.968  Sum_probs=51.0

Q ss_pred             CccccccccCCCCcccCCCCCCccCCCCcceeecC-CCCccCCCCccCCCCCCchhhccCCC-CCccCCCCC
Q psy11797        157 QRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCT-MGMAWGPQCQLCPTRGSQEYTDLCLE-SGLTVDGRD  226 (249)
Q Consensus       157 ~~~~~C~~~~~~~~C~c~~g~~~~~~~~~~~C~C~-~g~~~g~~C~~C~~~~~~~~~c~Cp~-~G~~~~~~d  226 (249)
                      .+.+.|+..+...+|..+..  .  .+++.+|.|. .|.+||..|++||..++..|.-+||. +||+.++.|
T Consensus         5 ~R~~~Cy~~~~~g~C~~p~~--~--~~tk~~CCCs~~G~aWG~~Ce~CP~~gs~ef~~lCP~G~G~~~~~~d   72 (74)
T 1apj_A            5 LRMSYCYAKFEGGKCSSPKS--R--NHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPYGSGIIVGPDD   72 (74)
T ss_dssp             GCEEEEEEEECSSCEEEEEE--E--EEEHHHHHTTSCCSEETTTTEECCCTTSHHHHHHCSSCSCSSCCTTS
T ss_pred             ccccCccccccCCcccCCCC--C--CccccccccCCCCCccCCCcccCCCCChHHHHhhCcCCCcccCCCCC
Confidence            45677877766666754321  1  3678999999 69999999999999999999999976 888776443

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.12  E-value=5.7e-06  Score=76.92  Aligned_cols=143  Identities=20%  Similarity=0.333  Sum_probs=80.6

Q ss_pred             eeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccC--CCCCC-CCeeeeCCCcceeecC------CCcee
Q psy11797         52 YMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELN--LDSCA-NGRCVNLEGSYRCECE------RGFKL  122 (249)
Q Consensus        52 y~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~--~~~C~-~g~C~~~~g~~~C~C~------~G~~~  122 (249)
                      ..|.|++||+|..|+.           ..++.... .....|...  ..+|. +|.|+.    .+|.|+      +||. 
T Consensus       446 g~C~C~~Gy~G~~Cec-----------~~~~~~~~-~~~~~C~~~~~~~~Cs~~G~C~~----G~C~C~~~~~~~~G~~-  508 (687)
T 3k6s_B          446 GICRCDTGYIGKNCEC-----------QTQGRSSQ-ELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLIY-  508 (687)
T ss_dssp             SSEEECSSEESTTSCE-----------ESSSCCCS-GGGSTTSSSTTSCGGGSSEEEET----TEEEECCCCSTTCCEE-
T ss_pred             CEeEcCCCCcCCcccc-----------cCCcCCcc-ccCCCCCCCCCCCcCCCCCEEeC----CEEEcCCCCCCCCCcc-
Confidence            5799999999988872           11110000 001135431  13477 678983    289999      9999 


Q ss_pred             CCCCCCccc-CCCccceeeeecCCcccccccCCCCCc--cccccccCCCCcccCCCCCCccCCC---CcceeecCCC--C
Q psy11797        123 SLDGKQCLG-KGQFVEFRIILSMPKAENSVNNNNNQR--LGFCYRSLTNGRCVLPTGPALLMEV---TRMDCCCTMG--M  194 (249)
Q Consensus       123 ~~~g~~C~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~C~~~~~~~~C~c~~g~~~~~~~---~~~~C~C~~g--~  194 (249)
                         |..|+. +..|...             +..+|..  .+.|..    ..|.|.+||.+....   ..+.|.-..+  .
T Consensus       509 ---G~~Ce~~~~~C~~~-------------~~~~C~~~~~G~C~~----g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~C  568 (687)
T 3k6s_B          509 ---GQYCECDTINCERY-------------NGQVCGGPGRGLCFC----GKCRCHPGFEGSACQCERTTEGCLNPRRVEC  568 (687)
T ss_dssp             ---STTSCEESSCSCEE-------------TTEETSHHHHEEEET----TEEEECTTCCSTTSCSCCSSCTTBCTTCSBT
T ss_pred             ---ccccccccccccCC-------------CCcCcCCCCCCeEEC----CEEEcCCCCcCCCCccCCCCCCCCCCCCCCC
Confidence               889973 3333211             1123566  677874    479999999887632   2344432111  1


Q ss_pred             ccCCCCccCCCCCCchhhccCCCCCccCCCCCC-cccccCCCCCCC-Cccc
Q psy11797        195 AWGPQCQLCPTRGSQEYTDLCLESGLTVDGRDI-DECVTIPAVESS-KLAK  243 (249)
Q Consensus       195 ~~g~~C~~C~~~~~~~~~c~Cp~~G~~~~~~di-deC~~~~~~C~n-g~c~  243 (249)
                      ..++.|    ..    +.|.| .+||+|..-++ ..|.   ..|.+ +.|+
T Consensus       569 s~~G~C----~~----g~C~C-~~Gy~G~~Ce~c~~C~---~~C~~~g~Cv  607 (687)
T 3k6s_B          569 SGRGRC----RC----NVCEC-HSGYQLPLCQECPGCP---SPCGKYISCA  607 (687)
T ss_dssp             SSSCCB----CS----SCBCC-STTCCTTTTCCCTTSC---CCCTTTHHHH
T ss_pred             CCCCcC----CC----CEEEC-CCCCcCCCCCCCCCCC---cccCCCCCCC
Confidence            113344    22    56999 79999975333 4462   34755 3443

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=98.10  E-value=1.9e-06  Score=54.37  Aligned_cols=38  Identities=26%  Similarity=0.613  Sum_probs=32.7

Q ss_pred             CCCCCCCeeeeCC-CcceeecCCCceeCCCCCCcccCCCc
Q psy11797         97 LDSCANGRCVNLE-GSYRCECERGFKLSLDGKQCLGKGQF  135 (249)
Q Consensus        97 ~~~C~~g~C~~~~-g~~~C~C~~G~~~~~~g~~C~~~~~~  135 (249)
                      .+.|.+ .|++++ |+|.|.|++||.|..++++|++++++
T Consensus         6 nggC~~-~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~~   44 (59)
T 2wph_E            6 NGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF   44 (59)
T ss_dssp             GGGCSS-EEEECSTTCEEEECCTTEEECTTSSCEEESSSS
T ss_pred             CCCcCC-EeEeCCCCCEEeeCCCCcEECCCCCcccCCCCC
Confidence            456776 899999 69999999999999999999986554

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.02  E-value=3.5e-06  Score=51.97  Aligned_cols=37  Identities=22%  Similarity=0.413  Sum_probs=28.2

Q ss_pred             CCCccCCC---CCCCCCCce--ecCCCeeeecCCCccccCCC
Q psy11797         30 DVDECRTP---ANTCKFSCK--NLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        30 did~C~~~---~~~c~~~C~--n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +|++|.+.   ++..+++|+  +..++|.|.|++||+|..++
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce   43 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ   43 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCC
Confidence            45666654   555557777  67889999999999998776

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.00  E-value=5e-06  Score=47.74  Aligned_cols=36  Identities=44%  Similarity=0.985  Sum_probs=30.9

Q ss_pred             cCcccccCCCCCCC-CeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         89 DVNECELNLDSCAN-GRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        89 ~i~~C~~~~~~C~~-g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      ++++|..  .+|.+ |.|+++.++|+|.|++||.    |+.|+
T Consensus         2 d~d~C~~--~pC~ngg~C~~~~~~~~C~C~~G~~----G~~Ce   38 (39)
T 1edm_B            2 DGDQCES--NPCLNGGSCKDDINSYECWCPFGFE----GKNCE   38 (39)
T ss_dssp             CCCTTTT--CCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred             ccccCCC--CCCCCCCEeEcCCCceEeECCCCCc----CCccC
Confidence            6788874  78994 6999999999999999998    77774

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=97.99  E-value=7.3e-06  Score=51.68  Aligned_cols=52  Identities=23%  Similarity=0.579  Sum_probs=39.6

Q ss_pred             cCCCCCCCCCCceecC-CCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCCCeeeeCC
Q psy11797         34 CRTPANTCKFSCKNLI-GSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCANGRCVNLE  109 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~-gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~  109 (249)
                      |......|.+.|+|++ |+|.|.|++||.+....                  ++|+++++     .+|.+ .|+|..
T Consensus         2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~------------------~tC~d~~~-----~pC~~-~c~n~~   54 (59)
T 2wph_E            2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQ------------------KSCEPAVP-----FPCGR-VSVSQT   54 (59)
T ss_dssp             TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTS------------------SCEEESSS-----SCTTC-CCSCCC
T ss_pred             CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCC------------------CcccCCCC-----CCCCC-cccccc
Confidence            4555567888999999 69999999999987766                  78887653     56764 677653

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=97.99  E-value=7.5e-06  Score=72.26  Aligned_cols=110  Identities=23%  Similarity=0.417  Sum_probs=65.1

Q ss_pred             CCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCCCcceeecC
Q psy11797         39 NTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECE  117 (249)
Q Consensus        39 ~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~  117 (249)
                      +..+++|.+  ++|.|.|++||+|..|+..         |..++.+..|.  ++|.. .+.|. ++.|.  .++|+|.|+
T Consensus       205 C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~---------C~~g~~g~~C~--~~C~~-~~~C~~~g~C~--~~~~~C~C~  268 (423)
T 2gy5_A          205 CMNNGVCHE--DTGECICPPGFMGRTCEKA---------CELHTFGRTCK--ERCSG-QEGCKSYVFCL--PDPYGCSCA  268 (423)
T ss_dssp             CCTTCEECT--TTCCEECCTTEESTTSCEE---------CCTTEESTTSC--EECCS-TTTTTTCCEEE--TTTTEEECC
T ss_pred             CCCCCEEEC--CCCcEeCCCCccCCCcccc---------cCCCCCCCCcC--ccCCC-CCCCCCCCEEC--CCCCeEEeC
Confidence            334477865  5689999999999888721         22333333443  24543 35677 45774  578999999


Q ss_pred             CCceeCCCCCCcccCCCccceeeeecCCccccccc-CCCCCccccccccCCCCcccCCCCCCcc
Q psy11797        118 RGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVN-NNNNQRLGFCYRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       118 ~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~C~~~~~~~~C~c~~g~~~~  180 (249)
                      +||.    |..|+.  .|..+...       ..|. ..+|.+++.|.+..   .|.|.+||.+.
T Consensus       269 ~G~~----G~~C~~--~C~~G~~G-------~~C~~~C~C~ngg~C~~~~---~C~C~~G~~G~  316 (423)
T 2gy5_A          269 TGWK----GLQCNE--ACHPGFYG-------PDCKLRCSCNNGEMCDRFQ---GCLCSPGWQGL  316 (423)
T ss_dssp             BTCB----SGGGCB--CCCTTBCS-------BTTCCBCCCTTCCEEETTT---EEECCTTCBST
T ss_pred             CCcc----cccccC--ccCCCCcC-------CcccccccCCCCCEecCCC---ceECCCCCcCC
Confidence            9999    888865  22222110       0111 12456666776542   26666666654

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.89  E-value=9.3e-06  Score=53.23  Aligned_cols=39  Identities=33%  Similarity=0.629  Sum_probs=29.5

Q ss_pred             cCcccccCCCCCC-CCeeeeCCCcceee-cCCCceeCCCCC
Q psy11797         89 DVNECELNLDSCA-NGRCVNLEGSYRCE-CERGFKLSLDGK  127 (249)
Q Consensus        89 ~i~~C~~~~~~C~-~g~C~~~~g~~~C~-C~~G~~~~~~g~  127 (249)
                      ||+||....++|. ++.|+|++|+|+|. +..||.+..++.
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~   42 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE   42 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC
Confidence            7899987667898 45899999999997 445666544443

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.89  E-value=1.2e-05  Score=47.71  Aligned_cols=34  Identities=18%  Similarity=0.233  Sum_probs=25.4

Q ss_pred             ccCCC---CCCCCCCce--ecCCCeeeecCCCccccCCC
Q psy11797         33 ECRTP---ANTCKFSCK--NLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        33 ~C~~~---~~~c~~~C~--n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +|.+.   ++..+++|+  +..++|+|.|++||+|..++
T Consensus         2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce   40 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ   40 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred             CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence            45444   555557776  56789999999999998776

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.86  E-value=1.1e-05  Score=52.92  Aligned_cols=37  Identities=35%  Similarity=0.688  Sum_probs=27.5

Q ss_pred             CCCCccCCCCCCCC--CCceecCCCeeee-cCCCccccCC
Q psy11797         29 IDVDECRTPANTCK--FSCKNLIGSYMCT-CPPGYQQVTH   65 (249)
Q Consensus        29 ~did~C~~~~~~c~--~~C~n~~gsy~C~-C~~G~~g~~~   65 (249)
                      +|||||...++.|.  ++|+|++|+|+|. +..||.+...
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~   40 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLH   40 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCS
T ss_pred             CccccccCCCCCCCCCCEeECCCCCeEecccCCccccccc
Confidence            47888887666775  6899999999997 4456665443

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.80  E-value=1.7e-05  Score=49.16  Aligned_cols=38  Identities=34%  Similarity=0.800  Sum_probs=31.4

Q ss_pred             ecCcccccCCCCCCC-Cee-----eeCCCcceeecCCCceeCCCCCCccc
Q psy11797         88 VDVNECELNLDSCAN-GRC-----VNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        88 ~~i~~C~~~~~~C~~-g~C-----~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ++++||++  ++|.| |.|     ++..++|+|.|++||.    |++|+.
T Consensus         6 ~~~~eC~s--~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE~   49 (55)
T 3u7u_G            6 VKCAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQN   49 (55)
T ss_dssp             EECCSTTT--TTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSCE
T ss_pred             ccCCCCcC--CCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcCc
Confidence            68999985  89995 599     4667899999999999    999976

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.80  E-value=1e-05  Score=48.21  Aligned_cols=36  Identities=22%  Similarity=0.505  Sum_probs=25.6

Q ss_pred             CCCccCC---CCCCCCCCceecC--CCeeeecCCCccccCCC
Q psy11797         30 DVDECRT---PANTCKFSCKNLI--GSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        30 did~C~~---~~~~c~~~C~n~~--gsy~C~C~~G~~g~~~~   66 (249)
                      +|++|.+   +++.. ++|+...  ++|.|.|++||+|..++
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce   42 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence            4556655   45544 5666543  68999999999998776

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.78  E-value=8.6e-06  Score=52.08  Aligned_cols=35  Identities=20%  Similarity=0.397  Sum_probs=24.1

Q ss_pred             CccCCCCCCCCCCcee-----cCCCeeeecCCCccccCCC
Q psy11797         32 DECRTPANTCKFSCKN-----LIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n-----~~gsy~C~C~~G~~g~~~~   66 (249)
                      |+|.++++.++++|++     ..++|.|.|++||+|..++
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce   46 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence            3444444444455554     5678999999999998776

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.68  E-value=7.5e-06  Score=67.75  Aligned_cols=36  Identities=17%  Similarity=0.618  Sum_probs=28.0

Q ss_pred             CCCCccCCCCCCCC--CCceecCCCeeeecCCCccccC
Q psy11797         29 IDVDECRTPANTCK--FSCKNLIGSYMCTCPPGYQQVT   64 (249)
Q Consensus        29 ~did~C~~~~~~c~--~~C~n~~gsy~C~C~~G~~g~~   64 (249)
                      .|+|||..+.+.|.  +.|+|+.|+|.|.|++||.|++
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG   40 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNG   40 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECS
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCC
Confidence            47888887667775  7899999999999999999865

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.60  E-value=0.0001  Score=68.51  Aligned_cols=90  Identities=23%  Similarity=0.446  Sum_probs=60.2

Q ss_pred             CCCceecCCCeeeecC------CCccccCCCcccccccCCccccCCCCCCceecCcccccC-CCCCC---CCeeeeCCCc
Q psy11797         42 KFSCKNLIGSYMCTCP------PGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELN-LDSCA---NGRCVNLEGS  111 (249)
Q Consensus        42 ~~~C~n~~gsy~C~C~------~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~-~~~C~---~g~C~~~~g~  111 (249)
                      .+.|..  +  .|.|+      +||+|..|+                     .+++.|... ..+|.   +|.|+.    
T Consensus       487 ~G~C~~--G--~C~C~~~~~~~~G~~G~~Ce---------------------~~~~~C~~~~~~~C~~~~~G~C~~----  537 (687)
T 3k6s_B          487 LGDCVC--G--QCLCHTSDVPGKLIYGQYCE---------------------CDTINCERYNGQVCGGPGRGLCFC----  537 (687)
T ss_dssp             SEEEET--T--EEEECCCCSTTCCEESTTSC---------------------EESSCSCEETTEETSHHHHEEEET----
T ss_pred             CCEEeC--C--EEEcCCCCCCCCCccccccc---------------------cccccccCCCCcCcCCCCCCeEEC----
Confidence            377873  2  89999      999998776                     355666531 23576   468874    


Q ss_pred             ceeecCCCceeCCCCCCccc---CCCccceeeeecCCcccccccCCCCCccccccccCCCCcccCCCCCCccC
Q psy11797        112 YRCECERGFKLSLDGKQCLG---KGQFVEFRIILSMPKAENSVNNNNNQRLGFCYRSLTNGRCVLPTGPALLM  181 (249)
Q Consensus       112 ~~C~C~~G~~~~~~g~~C~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~C~c~~g~~~~~  181 (249)
                      ..|.|++||.    |..|+-   ++.|..             -+..+|...+.|..    +.|.|.+||.+..
T Consensus       538 g~C~C~~G~~----G~~Cec~~~~~~C~~-------------~~g~~Cs~~G~C~~----g~C~C~~Gy~G~~  589 (687)
T 3k6s_B          538 GKCRCHPGFE----GSACQCERTTEGCLN-------------PRRVECSGRGRCRC----NVCECHSGYQLPL  589 (687)
T ss_dssp             TEEEECTTCC----STTSCSCCSSCTTBC-------------TTCSBTSSSCCBCS----SCBCCSTTCCTTT
T ss_pred             CEEEcCCCCc----CCCCccCCCCCCCCC-------------CCCCCCCCCCcCCC----CEEECCCCCcCCC
Confidence            3899999999    888872   122211             01225677788875    5688888888775

>1ksq_A Latent transforming growth factor beta binding protein 1; structure, LTBP-1, TGF-beta, TB domain, latency associated propeptide, LAP; NMR {Homo sapiens} SCOP: g.23.1.1

Probab=97.54  E-value=1.8e-05  Score=52.17  Aligned_cols=62  Identities=34%  Similarity=0.890  Sum_probs=49.1

Q ss_pred             ccccccccCCC-CcccCCCCCCccCCCCcceeecCCCCccCCCCcc--CCCCCCchhhccCCC-CCccCC
Q psy11797        158 RLGFCYRSLTN-GRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQL--CPTRGSQEYTDLCLE-SGLTVD  223 (249)
Q Consensus       158 ~~~~C~~~~~~-~~C~c~~g~~~~~~~~~~~C~C~~g~~~g~~C~~--C~~~~~~~~~c~Cp~-~G~~~~  223 (249)
                      ..+.|+..... ..|..+..    .++++.+|.|+.|.+||..|++  ||..++..|.=+||. +||..+
T Consensus         8 ~~~~Cy~~~~~~~~Cs~pl~----~~~tk~~CCC~~G~~WG~~ce~~~CP~~gt~~f~~lCP~G~G~~~~   73 (75)
T 1ksq_A            8 EKKECYYNLNDASLCDNVLA----PNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMCPKGKGFVPA   73 (75)
T ss_dssp             CEEEEESSBCTTTTCBCSSC----CEEEHHHHHHTCCSEEEETTEEEECCCSSSHHHHHHCSSCSCCSSS
T ss_pred             cccCceeccccCCcCCCccc----CccccccccccccCccCCCCCccCCCCCCHHHHHhcCCCCcccCcC
Confidence            45678877655 57765433    2367889999999999999997  999999999999976 888654

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.51  E-value=4.6e-05  Score=45.33  Aligned_cols=39  Identities=28%  Similarity=0.775  Sum_probs=30.8

Q ss_pred             cCccccc-CCCCCCCCeeeeCC--CcceeecCCCceeCCCCCCccc
Q psy11797         89 DVNECEL-NLDSCANGRCVNLE--GSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        89 ~i~~C~~-~~~~C~~g~C~~~~--g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +|++|.. ..++|.||.|+...  ++|.|.|++||+    |.+|+.
T Consensus         2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~   43 (46)
T 1k36_A            2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCEH   43 (46)
T ss_dssp             CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSCC
T ss_pred             ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCCc
Confidence            4667763 13789989999754  689999999999    888875

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=97.50  E-value=7.1e-05  Score=57.55  Aligned_cols=44  Identities=27%  Similarity=0.786  Sum_probs=38.0

Q ss_pred             eecCcccccCCCC---CCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         87 CVDVNECELNLDS---CANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        87 C~~i~~C~~~~~~---C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +.++++|......   |.+ .|+++.|+|.|.|++||.+..++++|++
T Consensus       121 ~~di~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~d~~~C~~  167 (170)
T 1szb_A          121 AEDIDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSE  167 (170)
T ss_dssp             EEECCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             ccccCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcEECCCCCcccc
Confidence            5789999864433   887 8999999999999999999999999977

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.43  E-value=0.0001  Score=45.25  Aligned_cols=39  Identities=31%  Similarity=0.754  Sum_probs=31.7

Q ss_pred             cCcccccC-CCCCCC-Ceee--eCCCcceeecCCCceeCCCCCCccc
Q psy11797         89 DVNECELN-LDSCAN-GRCV--NLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        89 ~i~~C~~~-~~~C~~-g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +|++|... .++|.+ |.|+  +..++|.|.|++||+    |..|+.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~   44 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT   44 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence            57788751 248995 5999  788999999999998    888876

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.40  E-value=3.8e-05  Score=63.55  Aligned_cols=45  Identities=22%  Similarity=0.726  Sum_probs=36.0

Q ss_pred             ecCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCcccCCC
Q psy11797         88 VDVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQ  134 (249)
Q Consensus        88 ~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~  134 (249)
                      +|+|||....+.|. ++.|+|+.|+|.|.|++||.  .+|..|.++++
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~   48 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAEGS   48 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEETTC
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCC
Confidence            58999986667898 67999999999999999998  45889999876

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=97.22  E-value=0.00017  Score=60.03  Aligned_cols=51  Identities=33%  Similarity=0.684  Sum_probs=43.5

Q ss_pred             cCcccccC-CCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceee
Q psy11797         89 DVNECELN-LDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRI  140 (249)
Q Consensus        89 ~i~~C~~~-~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~  140 (249)
                      ++|||... .+.|.| .|+++.++|+|.|+.||.+..++++|.+.++|..++.
T Consensus         1 ~~~eC~~~~~~~C~~-~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~~   52 (283)
T 3f1s_B            1 AKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVL   52 (283)
T ss_dssp             --CCCCSSCSSSCSS-BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTCC
T ss_pred             CCCccCCCCCCCCCC-EeeCCCCCeEecCCCCcccCCCCCccccccccccCcc
Confidence            36788876 678987 8999999999999999999999999999988887643

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.18  E-value=0.00015  Score=45.85  Aligned_cols=40  Identities=23%  Similarity=0.732  Sum_probs=32.5

Q ss_pred             eecCcccccCCCCCCC---CeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         87 CVDVNECELNLDSCAN---GRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        87 C~~i~~C~~~~~~C~~---g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ++++++|..  +||.+   |.|+++.++|.|.|++||.+   |..|+.
T Consensus         8 ~~~~d~C~s--nPC~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C~~   50 (61)
T 2k2s_B            8 SETPAACSS--NPCGPEAAGTCKETNSGYICRCNQGYRI---SLDGTG   50 (61)
T ss_dssp             TTSCCHHHH--CSSCSSSCCEEEECSSEEEEECCTTEEE---EECSSS
T ss_pred             cCCCCcCcC--CCCcCCCccccccCCCceEeECCCCCcc---CCCCCC
Confidence            567899985  78995   59999999999999999973   345655

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=97.03  E-value=0.00039  Score=53.32  Aligned_cols=38  Identities=32%  Similarity=0.894  Sum_probs=31.4

Q ss_pred             CCCCccCCCCCC---CCCCceecCCCeeeecCCCccccCCC
Q psy11797         29 IDVDECRTPANT---CKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        29 ~did~C~~~~~~---c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +++++|...+..   |...|+|+.|+|.|.|++||++....
T Consensus       122 ~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~  162 (170)
T 1szb_A          122 EDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNK  162 (170)
T ss_dssp             EECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTS
T ss_pred             cccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCC
Confidence            467889876544   77889999999999999999976654

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.97  E-value=0.00071  Score=39.84  Aligned_cols=30  Identities=33%  Similarity=0.811  Sum_probs=25.5

Q ss_pred             CCCCC-Ceee--eCCCcceeecCCCceeCCCCCCccc
Q psy11797         98 DSCAN-GRCV--NLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        98 ~~C~~-g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ++|.+ |.|+  +..++|+|.|++||.    |++|+.
T Consensus         9 ~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~   41 (45)
T 1a3p_A            9 GYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQT   41 (45)
T ss_dssp             SCCSSSCEEEECTTTSSEEEECCTTEE----TTTTCE
T ss_pred             CCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCCc
Confidence            38985 5998  678899999999999    888864

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=96.84  E-value=0.00056  Score=58.55  Aligned_cols=43  Identities=40%  Similarity=0.921  Sum_probs=29.3

Q ss_pred             CcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCC
Q psy11797         90 VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQ  134 (249)
Q Consensus        90 i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~  134 (249)
                      |+||+ .++.|.+ .|+|++|+|.|.|++||.+..++++|...++
T Consensus         1 i~ec~-~~~~C~~-~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~   43 (349)
T 3v64_C            1 VNECA-EEGYCSQ-GCTNSEGAFQCWCEAGYELRPDRRSCKALGP   43 (349)
T ss_dssp             ---------CCSS-EECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred             CcccC-CCCCCcC-eeecCCCCeEEECCCCccCCCCCCccccccc
Confidence            46787 4678987 8999999999999999999999999987655

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=96.83  E-value=0.00081  Score=42.67  Aligned_cols=36  Identities=36%  Similarity=0.825  Sum_probs=29.3

Q ss_pred             CcccccCCCCCCC-Ceeee-----CCCcceeecCCCceeCCCCCCccc
Q psy11797         90 VNECELNLDSCAN-GRCVN-----LEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~~~~~C~~-g~C~~-----~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .++|..  ++|.+ |.|++     ..++|.|.|++||.    |..|+.
T Consensus         6 c~~C~~--~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~   47 (63)
T 1hae_A            6 CAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTE   47 (63)
T ss_dssp             CCHHHH--TTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCE
T ss_pred             cCCCCC--CcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccCc
Confidence            456764  78985 69997     67899999999999    899963

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=96.71  E-value=0.0011  Score=55.16  Aligned_cols=37  Identities=27%  Similarity=0.665  Sum_probs=31.0

Q ss_pred             CCCccCCC-CCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         30 DVDECRTP-ANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        30 did~C~~~-~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +.|||... +..|.+.|.++.++|.|.|+.||.+....
T Consensus         1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~   38 (283)
T 3f1s_B            1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDH   38 (283)
T ss_dssp             --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTS
T ss_pred             CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCC
Confidence            46889877 78899999999999999999999887655

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.70  E-value=0.0006  Score=51.66  Aligned_cols=35  Identities=26%  Similarity=0.645  Sum_probs=28.9

Q ss_pred             CccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         32 DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ++|...++..+++|++..++|.|.|++||+|..|+
T Consensus       120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce  154 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE  154 (162)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC
T ss_pred             CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccc
Confidence            56777666666899999999999999999996554

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.70  E-value=0.00043  Score=61.77  Aligned_cols=73  Identities=22%  Similarity=0.518  Sum_probs=32.2

Q ss_pred             ccccCCCCCCceecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccceeeeecCCcccccccCCC
Q psy11797         76 RTAESGGKSHECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFRIILSMPKAENSVNNNN  155 (249)
Q Consensus        76 ~~~~~~~~~~~C~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (249)
                      ..|..++.+..|. +++|..   +|.||.|++.   +.|.|++||.    +..|+. .                .|.. +
T Consensus       379 ~~C~~~~~g~~c~-~~~C~~---~C~nG~C~~~---~~C~C~~G~~----G~~C~~-~----------------~C~~-~  429 (463)
T 2wg3_C          379 EECRATVQPAQTL-TSECSR---LCRNGYCTPT---GKCCCSPGWE----GDFCRT-A----------------KCEP-A  429 (463)
T ss_dssp             GGGCCCCCCCCCC-CCHHHH---HCCSEEECTT---SCEEECTTEE----STTSCE-E----------------CC----
T ss_pred             ccCCCCCcCCCCc-cccccC---CCCCCccCCC---CeECCCCCcC----CCcCCc-C----------------cCCC-C
Confidence            3455555555553 567874   4888899863   4899999999    888853 1                1222 5


Q ss_pred             CCccccccccCCCCcccCCCCCCcc
Q psy11797        156 NQRLGFCYRSLTNGRCVLPTGPALL  180 (249)
Q Consensus       156 ~~~~~~C~~~~~~~~C~c~~g~~~~  180 (249)
                      |.+.+.|.+.   +.|.|..||.+.
T Consensus       430 C~~~g~C~~~---~~C~C~~G~~G~  451 (463)
T 2wg3_C          430 CRHGGVCVRP---NKCLCKKGYLGP  451 (463)
T ss_dssp             -------------------------
T ss_pred             CCCCCEECCC---CEEECCCCcccC
Confidence            6777888753   567777777654

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=96.68  E-value=0.0021  Score=44.26  Aligned_cols=59  Identities=25%  Similarity=0.597  Sum_probs=47.1

Q ss_pred             CCcee-cCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecC--cccccCCCCCC-CCeeeeCC-----Ccce
Q psy11797         43 FSCKN-LIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDV--NECELNLDSCA-NGRCVNLE-----GSYR  113 (249)
Q Consensus        43 ~~C~n-~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i--~~C~~~~~~C~-~g~C~~~~-----g~~~  113 (249)
                      +.|.. ..+...|+|.+||.++.                    ..|+.+  +.|....+.|. ++.|+...     +...
T Consensus        16 A~C~r~~~g~e~C~C~~gy~gdg--------------------~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~   75 (99)
T 1ob1_C           16 SGCFRHLDEREECKCLLNYKQEG--------------------DKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKIT   75 (99)
T ss_dssp             EEEECCTTSCCEEEECTTEEEET--------------------TEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCE
T ss_pred             CCeEEcCCCCEEEEecCCeecCC--------------------CeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceE
Confidence            66766 46889999999999865                    567766  57887667898 88998875     6789


Q ss_pred             eecCCCce
Q psy11797        114 CECERGFK  121 (249)
Q Consensus       114 C~C~~G~~  121 (249)
                      |.|.+||.
T Consensus        76 C~C~~g~~   83 (99)
T 1ob1_C           76 CECTKPDS   83 (99)
T ss_dssp             EEECSTTC
T ss_pred             eEeCCCCc
Confidence            99999975

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.67  E-value=0.00028  Score=43.01  Aligned_cols=30  Identities=37%  Similarity=0.759  Sum_probs=23.5

Q ss_pred             CCCCC-Ceeee----CCCcceeecCCCceeCCCCCCccc
Q psy11797         98 DSCAN-GRCVN----LEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        98 ~~C~~-g~C~~----~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ++|.| |.|++    ..++|.|.|++||.    |.+|+.
T Consensus        14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce~   48 (52)
T 3ca7_A           14 WYCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEY   48 (52)
T ss_dssp             HTSCTTCEEEEEEETTEEEEEEECCTTEE----STTSCE
T ss_pred             CcCCCCCEEecCccCCCCCEEEECCCCCc----CCCCcc
Confidence            45664 58986    35689999999999    888875

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=96.64  E-value=0.0014  Score=52.32  Aligned_cols=65  Identities=23%  Similarity=0.417  Sum_probs=38.7

Q ss_pred             CCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccC--CCCCC-CCeeeeCCCcceeecCCC
Q psy11797         43 FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELN--LDSCA-NGRCVNLEGSYRCECERG  119 (249)
Q Consensus        43 ~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~--~~~C~-~g~C~~~~g~~~C~C~~G  119 (249)
                      ++|..    ..|.|.+||+|..++..           .+.....+ ....|...  ..+|. +|.|+.    ..|.|.+|
T Consensus       102 G~C~~----g~C~C~~G~~G~~Cec~-----------~~~~~~~~-~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~g  161 (217)
T 2p28_B          102 GFLEC----GICRCDTGYIGKNCECQ-----------TQGRSSQE-LEGSCRKDNNSIICSGLGDCVC----GQCLCHTS  161 (217)
T ss_dssp             EEEET----TEEEECTTEESTTSCEE-----------CCCCC-GG-GGGGGBSSTTSCBGGGTEEEET----TEEEECCC
T ss_pred             ceEEC----CEEECCCCccCCccccc-----------Cccccccc-CCCcCCCCCCCCCCCCCCEEeC----CceECCCC
Confidence            55653    48999999999988721           11000000 01123321  35677 679984    37999999


Q ss_pred             c------eeCCCCCCccc
Q psy11797        120 F------KLSLDGKQCLG  131 (249)
Q Consensus       120 ~------~~~~~g~~C~~  131 (249)
                      |      .    |..|+.
T Consensus       162 w~~~~~~~----G~~Ce~  175 (217)
T 2p28_B          162 DVPGKLIY----GQYCEC  175 (217)
T ss_dssp             CSTTCCEE----STTSCE
T ss_pred             CCCcccEE----CCCccc
Confidence            4      5    778863

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.64  E-value=0.00073  Score=41.34  Aligned_cols=29  Identities=21%  Similarity=0.413  Sum_probs=22.8

Q ss_pred             CCCCCCCce--ecCCCeeeecCCCccccCCC
Q psy11797         38 ANTCKFSCK--NLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        38 ~~~c~~~C~--n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ++..+++|+  +..++|.|.|++||+|..++
T Consensus        13 pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce   43 (53)
T 1nql_B           13 YCLHDGVCMYIEALDKYACNCVVGYIGERCQ   43 (53)
T ss_dssp             EECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence            344457786  55678999999999998876

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=96.59  E-value=0.0046  Score=42.85  Aligned_cols=59  Identities=27%  Similarity=0.588  Sum_probs=48.7

Q ss_pred             CCcee-cCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcc-cccCCCCCC-CCeeeeCC-CcceeecCC
Q psy11797         43 FSCKN-LIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNE-CELNLDSCA-NGRCVNLE-GSYRCECER  118 (249)
Q Consensus        43 ~~C~n-~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~-C~~~~~~C~-~g~C~~~~-g~~~C~C~~  118 (249)
                      +.|.. ..|...|+|..||+++.                    ..|+.++. |....+.|. ++.|+.+. ..-.|.|..
T Consensus        22 A~C~r~~~G~e~CrCl~gY~~dg--------------------~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~   81 (105)
T 1n1i_A           22 AACYRYLDGTEEWRCLLGFKEVG--------------------GKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTK   81 (105)
T ss_dssp             EEEEECTTSCEEEEECTTEEECS--------------------SSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCS
T ss_pred             CCeEECCCCCEeEEEECCeeccC--------------------CEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCC
Confidence            67877 57889999999999865                    56887788 776667898 88999885 788999999


Q ss_pred             Cce
Q psy11797        119 GFK  121 (249)
Q Consensus       119 G~~  121 (249)
                      +|.
T Consensus        82 ~~~   84 (105)
T 1n1i_A           82 EGS   84 (105)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            874

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.57  E-value=0.0021  Score=48.42  Aligned_cols=45  Identities=33%  Similarity=0.576  Sum_probs=37.0

Q ss_pred             ceecCcccccC-CCCCCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         86 ECVDVNECELN-LDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        86 ~C~~i~~C~~~-~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .+.++++|... ...|.+ .|+++.++|.|.|++||.|..++++|++
T Consensus       113 ~~~d~~eC~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~l~~~~~~C~~  158 (159)
T 1nzi_A          113 VATDINECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCGV  158 (159)
T ss_dssp             EEEECCTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred             ecccCcccCCCCCCCCCC-cccCcCCCEEEecCCCcEECCCCCcccc
Confidence            35688999863 246765 8999999999999999999999998865

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=96.34  E-value=0.0015  Score=55.88  Aligned_cols=35  Identities=31%  Similarity=0.781  Sum_probs=21.3

Q ss_pred             CCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         31 VDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ||||. .+..|.+.|+|++|+|.|.|++||.+....
T Consensus         1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~   35 (349)
T 3v64_C            1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDR   35 (349)
T ss_dssp             ---------CCSSEECCC---CCEECCTTEEECTTS
T ss_pred             CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCC
Confidence            57887 557788999999999999999999987654

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.18  E-value=0.0098  Score=45.16  Aligned_cols=25  Identities=24%  Similarity=0.485  Sum_probs=19.4

Q ss_pred             CCCceecC--CCeee-ecCCCccccCCC
Q psy11797         42 KFSCKNLI--GSYMC-TCPPGYQQVTHS   66 (249)
Q Consensus        42 ~~~C~n~~--gsy~C-~C~~G~~g~~~~   66 (249)
                      +++|....  +.+.| .|+++|+|..++
T Consensus         6 ~g~C~~~~~~g~~~C~~C~~g~~G~~Ce   33 (162)
T 1klo_A            6 GSSCAIVPKTKEVVCTHCPTGTAGKRCE   33 (162)
T ss_dssp             TCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred             cCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence            36776654  56899 699999998887

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=95.96  E-value=0.0027  Score=38.57  Aligned_cols=29  Identities=17%  Similarity=0.334  Sum_probs=22.1

Q ss_pred             CCCCCCCcee----cCCCeeeecCCCccccCCC
Q psy11797         38 ANTCKFSCKN----LIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        38 ~~~c~~~C~n----~~gsy~C~C~~G~~g~~~~   66 (249)
                      ++.++++|++    ..++|.|.|++||+|..++
T Consensus        15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce   47 (52)
T 3ca7_A           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (52)
T ss_dssp             TSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred             cCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence            3445577775    3467999999999998776

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=95.93  E-value=0.0049  Score=46.40  Aligned_cols=38  Identities=37%  Similarity=0.919  Sum_probs=30.4

Q ss_pred             CCCCccCCC-CCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         29 IDVDECRTP-ANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        29 ~did~C~~~-~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +++|+|... ...|.+.|.|..++|.|.|++||++....
T Consensus       115 ~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~  153 (159)
T 1nzi_A          115 TDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDM  153 (159)
T ss_dssp             EECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTS
T ss_pred             ccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCC
Confidence            467889863 35677889999999999999999976544

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=95.92  E-value=0.0037  Score=56.61  Aligned_cols=64  Identities=19%  Similarity=0.308  Sum_probs=37.4

Q ss_pred             eeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeC----CCcceeecCCCceeCCCC
Q psy11797         52 YMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNL----EGSYRCECERGFKLSLDG  126 (249)
Q Consensus        52 y~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~----~g~~~C~C~~G~~~~~~g  126 (249)
                      ..|.|.++|.|..+.          .|..|+.+..|.....|..  -+|. ++.|.+.    ...+.|.|++||.    |
T Consensus       407 ~~C~C~~g~~G~~C~----------~C~~Gy~G~~c~~~~~C~~--C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~----G  470 (525)
T 4aqs_A          407 GQCRCKLHVEGERCD----------VCKEGFYDLSAEDPYGCKS--CACNPLGTIPGGNPCDSETGYCYCKRLVT----G  470 (525)
T ss_dssp             SCCCBCTTEETTTTC----------EECTTEECCCTTSTTSSEE--CCCCTTTBCCSSCCBCTTTCCBCBCTTCC----S
T ss_pred             CccCCCCCCCCCccc----------CCCCCCcCCCCCCCCCCcc--CCCCCCceecCCCcccCCCCEEECCCCCc----C
Confidence            456666666665543          2555555555555555553  3443 2333332    2356899999998    8


Q ss_pred             CCccc
Q psy11797        127 KQCLG  131 (249)
Q Consensus       127 ~~C~~  131 (249)
                      ..|+.
T Consensus       471 ~~Ce~  475 (525)
T 4aqs_A          471 QRCDQ  475 (525)
T ss_dssp             TTTCC
T ss_pred             CCccc
Confidence            88853

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=95.90  E-value=0.0034  Score=47.43  Aligned_cols=40  Identities=33%  Similarity=0.735  Sum_probs=32.0

Q ss_pred             cccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCcccCCCcc
Q psy11797         91 NECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFV  136 (249)
Q Consensus        91 ~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~  136 (249)
                      ++|.  ..+|. ++.|++..++|.|.|++||.    |..|+.+++|.
T Consensus       120 ~~c~--~~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~  160 (162)
T 1g1s_A          120 ASCQ--DMSCSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDD  160 (162)
T ss_dssp             CCCC--TTGGGGSEEEEECSSSEEEEECTTEE----STTSCEECC--
T ss_pred             CCCc--CCCCCCCCEEecCCCCceEeCCCCCc----CcccccCcccC
Confidence            4565  36787 56999999999999999999    88999876664

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=95.88  E-value=0.001  Score=59.29  Aligned_cols=53  Identities=32%  Similarity=0.800  Sum_probs=18.1

Q ss_pred             CCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCC-CCeeeeCCCcceeecCCCce
Q psy11797         43 FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCA-NGRCVNLEGSYRCECERGFK  121 (249)
Q Consensus        43 ~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~  121 (249)
                      ++|++.   +.|.|++||+|..|+                       +++|..   +|. +|.|++.   ++|.|++||.
T Consensus       402 G~C~~~---~~C~C~~G~~G~~C~-----------------------~~~C~~---~C~~~g~C~~~---~~C~C~~G~~  449 (463)
T 2wg3_C          402 GYCTPT---GKCCCSPGWEGDFCR-----------------------TAKCEP---ACRHGGVCVRP---NKCLCKKGYL  449 (463)
T ss_dssp             EEECTT---SCEEECTTEESTTSC-----------------------EECC-----------------------------
T ss_pred             CccCCC---CeECCCCCcCCCcCC-----------------------cCcCCC---CCCCCCEECCC---CEEECCCCcc
Confidence            677653   589999999996654                       345763   788 4689865   6999999999


Q ss_pred             eCCCCCCccc
Q psy11797        122 LSLDGKQCLG  131 (249)
Q Consensus       122 ~~~~g~~C~~  131 (249)
                          +..|+.
T Consensus       450 ----G~~C~~  455 (463)
T 2wg3_C          450 ----GPQCEQ  455 (463)
T ss_dssp             ----------
T ss_pred             ----cCCCCC
Confidence                888876

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=95.71  E-value=0.005  Score=37.51  Aligned_cols=31  Identities=29%  Similarity=0.779  Sum_probs=26.0

Q ss_pred             CCCCCC-Ceee--eCCCcceeecCCCceeCCCCCCccc
Q psy11797         97 LDSCAN-GRCV--NLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        97 ~~~C~~-g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .++|.| |+|+  +..++|.|.|++||.    |..|+.
T Consensus        11 ~~pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~   44 (53)
T 1nql_B           11 DGYCLHDGVCMYIEALDKYACNCVVGYI----GERCQY   44 (53)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEE----STTSCE
T ss_pred             CCCCCCCeEEeeecCCCCEEEecCCCCc----CCCCCc
Confidence            367885 5998  677899999999999    999975

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=95.54  E-value=0.034  Score=42.09  Aligned_cols=33  Identities=24%  Similarity=0.534  Sum_probs=23.5

Q ss_pred             CC-CCeeeeCC--Cccee-ecCCCceeCCCCCCcccCCCcccee
Q psy11797        100 CA-NGRCVNLE--GSYRC-ECERGFKLSLDGKQCLGKGQFVEFR  139 (249)
Q Consensus       100 C~-~g~C~~~~--g~~~C-~C~~G~~~~~~g~~C~~~~~~~~~~  139 (249)
                      |. ++.|....  +.+.| .|+++|.    |.+|+.   |..+.
T Consensus         3 C~~~g~C~~~~~~g~~~C~~C~~g~~----G~~Ce~---C~~g~   39 (162)
T 1klo_A            3 CPGGSSCAIVPKTKEVVCTHCPTGTA----GKRCEL---CDDGY   39 (162)
T ss_dssp             SCTTCCEEECSSSCCEEECSCCTTEE----STTSCE---ECTTE
T ss_pred             CcCcCcccccCCCCCEEeCCCCCCCc----CCCCcC---CCCCC
Confidence            45 45787654  57899 7999999    888875   55443

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=95.48  E-value=0.0072  Score=52.86  Aligned_cols=81  Identities=25%  Similarity=0.515  Sum_probs=24.9

Q ss_pred             CCceecCCCeeeecCCCccccCCCcccccccCCccccCC-------CCCCcee------cCcccccCCCCCCC-CeeeeC
Q psy11797         43 FSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESG-------GKSHECV------DVNECELNLDSCAN-GRCVNL  108 (249)
Q Consensus        43 ~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~-------~~~~~C~------~i~~C~~~~~~C~~-g~C~~~  108 (249)
                      ..|....+++.|.|+.+++|..|+.-... ....+...+       .....|+      .-..|....++|.+ |.|++.
T Consensus       304 s~C~~~~g~~~C~C~~~ttG~~CE~C~pg-y~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ngg~C~~~  382 (426)
T 3zyj_B          304 TVCVYDNSKLTCECEHNTTGPDCGKCKKN-YQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGTCHNN  382 (426)
T ss_dssp             SCEEEETTEEEECCCTTEESSSSCEECTT-CCSSCCCCCBCCSSSSCBCCCCCCCCC-----------------------
T ss_pred             hhcCCCCCCceeeCCCCCcCCCccccccc-cccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCCCCCcCCC
Confidence            57887778899999999999998842111 111111111       1111221      12245444467874 478776


Q ss_pred             CCcceeecCCCceeCCCCCCccc
Q psy11797        109 EGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus       109 ~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .   +|.|++||.    |..|+.
T Consensus       383 ~---~C~C~~G~~----G~~Ce~  398 (426)
T 3zyj_B          383 V---RCLCPAAYT----GILCEK  398 (426)
T ss_dssp             -----------------------
T ss_pred             C---CCcCCCCCc----CCCCcC
Confidence            5   899999999    777765

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=95.43  E-value=0.0064  Score=55.31  Aligned_cols=38  Identities=21%  Similarity=0.436  Sum_probs=30.8

Q ss_pred             CCccCCCCCCCCCCcee-cCCCeeeecC-CCccccCCCcc
Q psy11797         31 VDECRTPANTCKFSCKN-LIGSYMCTCP-PGYQQVTHSTV   68 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n-~~gsy~C~C~-~G~~g~~~~~~   68 (249)
                      +|+|.++|+.++++|++ ..++|.|.|+ .||+|..|+..
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~   41 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP   41 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence            46677777777777877 7889999999 99999999853

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=95.40  E-value=0.0078  Score=54.44  Aligned_cols=64  Identities=22%  Similarity=0.336  Sum_probs=14.6

Q ss_pred             CCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCcccccCCCCCCC-CeeeeC--CCcceeecCCCceeCCCC
Q psy11797         50 GSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELNLDSCAN-GRCVNL--EGSYRCECERGFKLSLDG  126 (249)
Q Consensus        50 gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~~~~C~~-g~C~~~--~g~~~C~C~~G~~~~~~g  126 (249)
                      .++.|.|++||+|..++.          |..++.+.. .++++|..  .+|.+ +.+...  ...++|.|++||.    |
T Consensus       458 ~tg~C~C~~g~~G~~Ce~----------C~~G~~g~~-~~~~~C~~--C~C~~~gs~~~~C~~~tG~C~C~~G~~----G  520 (525)
T 4aqs_A          458 ETGYCYCKRLVTGQRCDQ----------CLPQHWGLS-NDLDGCRP--CDCDLGGALNNSCSEDSGQCSCLPHMI----G  520 (525)
T ss_dssp             TTCCBCBCTTCCSTTTCC--------------------------------------------------------------
T ss_pred             CCCEEECCCCCcCCCccc----------CCCCccCCC-CCCCCCcC--CCCCCCCccCCccCCCCCeeECCCCCc----C
Confidence            456899999999988762          444443332 34566653  45552 233332  2345799999999    8


Q ss_pred             CCcc
Q psy11797        127 KQCL  130 (249)
Q Consensus       127 ~~C~  130 (249)
                      ..|+
T Consensus       521 ~~Ce  524 (525)
T 4aqs_A          521 RQCN  524 (525)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            8875

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=95.19  E-value=0.01  Score=54.26  Aligned_cols=38  Identities=18%  Similarity=0.458  Sum_probs=30.2

Q ss_pred             CCccCCCCCCCCCCcee-cCCCeeeecC-CCccccCCCcc
Q psy11797         31 VDECRTPANTCKFSCKN-LIGSYMCTCP-PGYQQVTHSTV   68 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n-~~gsy~C~C~-~G~~g~~~~~~   68 (249)
                      ||+|.++|+.++++|++ ..++|.|.|+ +||+|..|+..
T Consensus         1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~   40 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP   40 (587)
T ss_dssp             CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred             CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence            46777777777778875 4588999999 99999999853

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=95.00  E-value=0.0089  Score=37.12  Aligned_cols=29  Identities=17%  Similarity=0.334  Sum_probs=21.5

Q ss_pred             CCCCCCCcee----cCCCeeeecCCCccccCCC
Q psy11797         38 ANTCKFSCKN----LIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        38 ~~~c~~~C~n----~~gsy~C~C~~G~~g~~~~   66 (249)
                      ++.++++|+.    ..++|.|.|++||+|..++
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence            3445577763    3457999999999998876

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=94.87  E-value=0.019  Score=48.02  Aligned_cols=42  Identities=31%  Similarity=0.678  Sum_probs=33.9

Q ss_pred             cCcccccC---CCCCCCCeeeeCC------CcceeecCCCceeCCCCCCccc
Q psy11797         89 DVNECELN---LDSCANGRCVNLE------GSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        89 ~i~~C~~~---~~~C~~g~C~~~~------g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +.++|...   .+.|.| .|++++      ++|+|.|+.||.|..++++|.+
T Consensus       266 ~~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~~  316 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT  316 (316)
T ss_dssp             CCCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEEC
T ss_pred             ccccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCEECCCCCccCC
Confidence            45778754   456887 899875      5899999999999999999863

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=94.59  E-value=0.021  Score=52.80  Aligned_cols=47  Identities=26%  Similarity=0.720  Sum_probs=39.4

Q ss_pred             cCcccccCCCCCCCCeeeeCC-CcceeecCCCceeCCCCCCcccCCCcc
Q psy11797         89 DVNECELNLDSCANGRCVNLE-GSYRCECERGFKLSLDGKQCLGKGQFV  136 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~-g~~~C~C~~G~~~~~~g~~C~~~~~~~  136 (249)
                      ++++|....+.|.| .|++++ ++|+|.|+.||.+..++++|.....+.
T Consensus       264 ~~n~C~~~ng~C~~-~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~L  311 (628)
T 4a0p_A          264 GWNECASSNGHCSH-LCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFL  311 (628)
T ss_dssp             CCCTTTTTGGGCSS-EEEEETTTEEEEECSTTCEECTTSSCEECCSSEE
T ss_pred             cceEeccCCCCcch-hhhcCCCCCeeEEcCCCcEecccCCcCcccccee
Confidence            56888865567887 899998 999999999999999999998765543

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=94.51  E-value=0.061  Score=38.69  Aligned_cols=28  Identities=14%  Similarity=0.300  Sum_probs=21.4

Q ss_pred             CCCCCCceecC--CCe-eeecCCCccccCCC
Q psy11797         39 NTCKFSCKNLI--GSY-MCTCPPGYQQVTHS   66 (249)
Q Consensus        39 ~~c~~~C~n~~--gsy-~C~C~~G~~g~~~~   66 (249)
                      +.++++|++..  .+| .|.|++||+|..++
T Consensus         3 C~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce   33 (122)
T 2fd6_A            3 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   33 (122)
T ss_dssp             CCSSCEEEECTTTTTCEEEECCTTEESTTSC
T ss_pred             CCCcCCcCCCcccCCCCCccCCCCCCCcccc
Confidence            44557787764  556 99999999998776

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=94.26  E-value=0.067  Score=38.46  Aligned_cols=29  Identities=34%  Similarity=0.901  Sum_probs=23.5

Q ss_pred             CCCC-CeeeeCC--Ccc-eeecCCCceeCCCCCCccc
Q psy11797         99 SCAN-GRCVNLE--GSY-RCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        99 ~C~~-g~C~~~~--g~~-~C~C~~G~~~~~~g~~C~~  131 (249)
                      +|.| |.|++..  .+| +|.|++||.    |..|+.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce~   34 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCEI   34 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEE----STTSCE
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCC----Cccccc
Confidence            5774 5898874  566 999999999    899976

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=93.77  E-value=0.064  Score=46.90  Aligned_cols=24  Identities=33%  Similarity=0.704  Sum_probs=21.0

Q ss_pred             eeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797        104 RCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus       104 ~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .|....+.+.|.|++++.    |..|+.
T Consensus       305 ~C~~~~g~~~C~C~~~tt----G~~CE~  328 (426)
T 3zyj_B          305 VCVYDNSKLTCECEHNTT----GPDCGK  328 (426)
T ss_dssp             CEEEETTEEEECCCTTEE----SSSSCE
T ss_pred             hcCCCCCCceeeCCCCCc----CCCccc
Confidence            788877889999999998    888876

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=93.58  E-value=0.034  Score=34.42  Aligned_cols=29  Identities=38%  Similarity=0.844  Sum_probs=23.4

Q ss_pred             CCCC-Ceeee----CCCcceeecCCCceeCCCCCCccc
Q psy11797         99 SCAN-GRCVN----LEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        99 ~C~~-g~C~~----~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +|.| |.|+.    ..+.|.|.|++||.    |.+|+.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~   48 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCEY   48 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEE----SSSSCE
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCc----cCCCcc
Confidence            6775 49983    44579999999999    999976

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=93.55  E-value=0.039  Score=50.90  Aligned_cols=42  Identities=31%  Similarity=0.673  Sum_probs=36.1

Q ss_pred             cCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         89 DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ..++|....+.|.+ .|++++++|+|.|+.||.|..++++|..
T Consensus       577 ~~~~C~~~ng~C~~-~C~~~~~~~~C~C~~g~~l~~d~~~C~~  618 (619)
T 3s94_A          577 GSNPCAEENGGCSH-LCLYRPQGLRCACPIGFELISDMKTCIV  618 (619)
T ss_dssp             CCCGGGSGGGGCSS-EEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred             ccccCCCCCCChhH-hhccCCCCeEEECCCCCEECCCCCcCCC
Confidence            45778765677887 8999999999999999999999999865

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=93.52  E-value=0.044  Score=46.04  Aligned_cols=41  Identities=32%  Similarity=0.753  Sum_probs=33.2

Q ss_pred             CcccccCCCCCCCCeeeeCCC--cceeecCCCceeCCCCCCccc
Q psy11797         90 VNECELNLDSCANGRCVNLEG--SYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~~~~~C~~g~C~~~~g--~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .++|....+.|.+ .|+..++  +|+|.|+.||.|..++++|.+
T Consensus       267 ~n~C~~~ng~Cs~-~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~  309 (318)
T 3sov_A          267 TNPCGIDNGGCSH-LCLMSPVKPFYQCACPTGVKLLENGKTCKD  309 (318)
T ss_dssp             CCTTTTTGGGCSS-EEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred             ccccccCCCCcce-EEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence            4566654456776 7998875  799999999999999999987

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=93.47  E-value=0.053  Score=32.42  Aligned_cols=33  Identities=30%  Similarity=0.708  Sum_probs=25.9

Q ss_pred             CCCCCCCeeeeC--CCcceeecCCCceeCCCCCCcccCC
Q psy11797         97 LDSCANGRCVNL--EGSYRCECERGFKLSLDGKQCLGKG  133 (249)
Q Consensus        97 ~~~C~~g~C~~~--~g~~~C~C~~G~~~~~~g~~C~~~~  133 (249)
                      .+.|.||+|+-.  .+.+.|.|++||.    |..|+..+
T Consensus        13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe~~d   47 (50)
T 3e50_C           13 TQFCFHGTCRFLVQEDKPACVCHSGYV----GARCEHAD   47 (50)
T ss_pred             cCcccCCEEeeccCCCCeEEECCCCCc----ccCCCcee
Confidence            367888888753  3679999999999    88997643

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=92.76  E-value=0.07  Score=49.27  Aligned_cols=37  Identities=24%  Similarity=0.737  Sum_probs=32.6

Q ss_pred             CCCccCCCCCCCCCCceecC-CCeeeecCCCccccCCC
Q psy11797         30 DVDECRTPANTCKFSCKNLI-GSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~-gsy~C~C~~G~~g~~~~   66 (249)
                      ++|+|......|...|++.+ ++|.|.|+.||.+....
T Consensus       264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~  301 (628)
T 4a0p_A          264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADN  301 (628)
T ss_dssp             CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTS
T ss_pred             cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccC
Confidence            67899887788999999998 99999999999987655

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=92.46  E-value=0.1  Score=43.58  Aligned_cols=37  Identities=22%  Similarity=0.618  Sum_probs=30.2

Q ss_pred             CCCccCCC---CCCCCCCceecC------CCeeeecCCCccccCCC
Q psy11797         30 DVDECRTP---ANTCKFSCKNLI------GSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        30 did~C~~~---~~~c~~~C~n~~------gsy~C~C~~G~~g~~~~   66 (249)
                      +.++|...   ...|...|++.+      ++|+|.|+.||++....
T Consensus       266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~  311 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDM  311 (316)
T ss_dssp             CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTS
T ss_pred             ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCC
Confidence            56889876   667889999875      58999999999987655

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=92.38  E-value=0.066  Score=40.19  Aligned_cols=34  Identities=24%  Similarity=0.574  Sum_probs=26.2

Q ss_pred             ccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         33 ECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        33 ~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      .|...++...++|.+..++|.|.|.+||.|..|+
T Consensus       121 ~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~  154 (164)
T 3cfw_A          121 SCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ  154 (164)
T ss_dssp             CCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSC
T ss_pred             CCCCCcCCCCCeecccCCCceeeeCCCccccccc
Confidence            3444444445899999999999999999996654

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=92.25  E-value=0.16  Score=30.31  Aligned_cols=30  Identities=23%  Similarity=0.748  Sum_probs=24.2

Q ss_pred             CCCCCCeee--eCCCcceeecCCCceeCCCCCCccc
Q psy11797         98 DSCANGRCV--NLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        98 ~~C~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +.|.||+|+  ...+.+.|.|+.||.    |..|+.
T Consensus        18 ~yC~nG~C~~i~~~~~~~C~C~~gy~----G~RCe~   49 (50)
T 2rnl_A           18 NFCIHGECKYIEHLEAVTCKCQQEYF----GERCGE   49 (50)
T ss_dssp             GTCSSSEEEEETTTTEEEEECCSSCC----SSSCCC
T ss_pred             CcCCCCEEEEecCCCCeeEECCCCcc----cccccc
Confidence            578888997  455678999999999    888763

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=92.11  E-value=0.099  Score=47.49  Aligned_cols=36  Identities=36%  Similarity=0.891  Sum_probs=31.3

Q ss_pred             CcccccCCCCCCC-Ceeee-CCCcceeecC-CCceeCCCCCCccc
Q psy11797         90 VNECELNLDSCAN-GRCVN-LEGSYRCECE-RGFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~~~~~C~~-g~C~~-~~g~~~C~C~-~G~~~~~~g~~C~~  131 (249)
                      +++|..  +||.| |.|++ ..++|.|.|+ +||.    |++|+.
T Consensus         2 ~d~C~~--~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~   40 (553)
T 1q4g_A            2 VNPCCY--YPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCTI   40 (553)
T ss_dssp             CCGGGG--CCCCTTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred             CCcCCC--CCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence            467875  79995 59999 8999999999 9999    999975

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=91.87  E-value=0.1  Score=41.45  Aligned_cols=56  Identities=27%  Similarity=0.584  Sum_probs=39.9

Q ss_pred             CCceecCCCeeeecCCC------ccccCCCcccccccCCccccCCCCCCceecCcccccC-CCCCC-C--CeeeeCCCcc
Q psy11797         43 FSCKNLIGSYMCTCPPG------YQQVTHSTVAIATTDTRTAESGGKSHECVDVNECELN-LDSCA-N--GRCVNLEGSY  112 (249)
Q Consensus        43 ~~C~n~~gsy~C~C~~G------~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C~~~-~~~C~-~--g~C~~~~g~~  112 (249)
                      ++|+.    ..|.|.+|      |+|..++                     .+++.|... ..+|. +  |.|+.    .
T Consensus       149 G~C~~----g~C~C~~gw~~~~~~~G~~Ce---------------------~~~~~C~~~~g~~C~~~~~G~C~~----g  199 (217)
T 2p28_B          149 GDCVC----GQCLCHTSDVPGKLIYGQYCE---------------------CDTINCERYNGQVCGGPGRGLCFC----G  199 (217)
T ss_dssp             EEEET----TEEEECCCCSTTCCEESTTSC---------------------EESSCSCEETTEETTCTTTEEEET----T
T ss_pred             CEEeC----CceECCCCCCCcccEECCCcc---------------------cCCccCCCCCCCCCCCCCCcEEeC----C
Confidence            67763    37999999      6887665                     245566532 12577 5  88985    3


Q ss_pred             eeecCCCceeCCCCCCccc
Q psy11797        113 RCECERGFKLSLDGKQCLG  131 (249)
Q Consensus       113 ~C~C~~G~~~~~~g~~C~~  131 (249)
                      +|.|.+||.    |..|+.
T Consensus       200 ~C~C~~G~~----G~~C~~  214 (217)
T 2p28_B          200 KCRCHPGFE----GSACQH  214 (217)
T ss_dssp             EEEECTTEE----STTSCE
T ss_pred             eeECCCCCc----cCCcCC
Confidence            899999999    888864

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=91.67  E-value=0.12  Score=30.82  Aligned_cols=30  Identities=33%  Similarity=0.860  Sum_probs=24.5

Q ss_pred             CCCCCCeee--eCCCcceeecCCCceeCCCCCCccc
Q psy11797         98 DSCANGRCV--NLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        98 ~~C~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +.|.||+|+  ...+.+.|.|+.||.    |..|+.
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe~   45 (50)
T 1iox_A           14 HYCIKGRCRFVVAEQTPSCVCDEGYI----GARCER   45 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEE----TTTTCE
T ss_pred             CcccCCEEEeEcCCCCeEEECCCCcc----cCCCCe
Confidence            667778886  445678999999999    999976

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=91.62  E-value=0.069  Score=39.68  Aligned_cols=35  Identities=23%  Similarity=0.663  Sum_probs=28.5

Q ss_pred             CccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         32 DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ++|.+.++...+.|.+...+|.|.|.+||+|+.|+
T Consensus       120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce  154 (157)
T 1g1t_A          120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE  154 (157)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCCCCCCEeecCCCCeeEECCCCccCcccc
Confidence            45666555555899999999999999999998876

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=91.29  E-value=0.15  Score=42.76  Aligned_cols=37  Identities=22%  Similarity=0.561  Sum_probs=30.5

Q ss_pred             CCCccCCCCCCCCCCceecCC--CeeeecCCCccccCCC
Q psy11797         30 DVDECRTPANTCKFSCKNLIG--SYMCTCPPGYQQVTHS   66 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~g--sy~C~C~~G~~g~~~~   66 (249)
                      ..++|......|...|+..++  +|+|.|+.||++....
T Consensus       266 ~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~  304 (318)
T 3sov_A          266 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENG  304 (318)
T ss_dssp             CCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTS
T ss_pred             cccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCC
Confidence            357888777788899998865  7999999999987655

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=90.09  E-value=0.14  Score=33.71  Aligned_cols=24  Identities=29%  Similarity=0.639  Sum_probs=18.5

Q ss_pred             CCce--ecCCCeeeecCCCccccCCC
Q psy11797         43 FSCK--NLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        43 ~~C~--n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ++|+  ...+.+.|.|++||+|..|+
T Consensus        51 G~C~~i~~~~~~~C~C~~GYtG~RCE   76 (79)
T 1xdt_R           51 GECKYVKELRAPSCICHPGYHGERCH   76 (79)
T ss_dssp             EEECCBGGGTBCCEEECTTEESTTCC
T ss_pred             CEeeeecCCCCeEEEcCCCccccccc
Confidence            4674  33467899999999998876

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=90.06  E-value=0.19  Score=45.96  Aligned_cols=36  Identities=36%  Similarity=0.976  Sum_probs=29.9

Q ss_pred             CcccccCCCCCCC-Ceeee-CCCcceeecC-CCceeCCCCCCccc
Q psy11797         90 VNECELNLDSCAN-GRCVN-LEGSYRCECE-RGFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~~~~~C~~-g~C~~-~~g~~~C~C~-~G~~~~~~g~~C~~  131 (249)
                      +++|.+  +||.| |.|++ ..++|.|.|+ +||.    |+.|+.
T Consensus         1 vd~C~s--~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~   39 (587)
T 3nt1_A            1 ANPCCS--NPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTT   39 (587)
T ss_dssp             CCTTTT--CCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred             CCCCCC--CCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence            467874  79995 59996 4589999999 9999    999976

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=89.47  E-value=0.18  Score=46.46  Aligned_cols=37  Identities=19%  Similarity=0.581  Sum_probs=32.2

Q ss_pred             CCCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ..++|...+..|...|++.+++|.|.|+.||.+....
T Consensus       577 ~~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~  613 (619)
T 3s94_A          577 GSNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDM  613 (619)
T ss_dssp             CCCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSST
T ss_pred             ccccCCCCCCChhHhhccCCCCeEEECCCCCEECCCC
Confidence            5688988778899999999999999999999886554

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=88.92  E-value=0.24  Score=32.52  Aligned_cols=38  Identities=29%  Similarity=0.708  Sum_probs=26.6

Q ss_pred             Cccccc-CCCCCCCCeeee--CCCcceeecCCCceeCCCCCCccc
Q psy11797         90 VNECEL-NLDSCANGRCVN--LEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~-~~~~C~~g~C~~--~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .++|.. ..+.|.||.|+-  ..+.+.|.|++||.    |..|+.
T Consensus        37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYt----G~RCE~   77 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYH----GERCHG   77 (79)
T ss_dssp             --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEE----STTCCE
T ss_pred             CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcc----cccccc
Confidence            355652 136788889953  34678999999999    888864

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=88.41  E-value=0.64  Score=32.09  Aligned_cols=32  Identities=31%  Similarity=0.661  Sum_probs=25.3

Q ss_pred             CCC-CCeeee-CCCcceeecCCCceeCCCCCCcccC
Q psy11797         99 SCA-NGRCVN-LEGSYRCECERGFKLSLDGKQCLGK  132 (249)
Q Consensus        99 ~C~-~g~C~~-~~g~~~C~C~~G~~~~~~g~~C~~~  132 (249)
                      .|. ++.|.. .+|...|.|..||..  ++..|..+
T Consensus        17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~   50 (105)
T 1n1i_A           17 NVPENAACYRYLDGTEEWRCLLGFKE--VGGKCVPA   50 (105)
T ss_dssp             CCCTTEEEEECTTSCEEEEECTTEEE--CSSSEEEC
T ss_pred             CCCCCCCeEECCCCCEeEEEECCeec--cCCEEEEC
Confidence            344 678988 678899999999984  47778774

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=88.02  E-value=0.23  Score=29.59  Aligned_cols=24  Identities=21%  Similarity=0.429  Sum_probs=19.0

Q ss_pred             CCce--ecCCCeeeecCCCccccCCC
Q psy11797         43 FSCK--NLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        43 ~~C~--n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ++|.  ...+.+.|+|++||+|..++
T Consensus        19 G~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 1iox_A           19 GRCRFVVAEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred             CEEEeEcCCCCeEEECCCCcccCCCC
Confidence            5664  34567899999999998887

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=87.98  E-value=0.42  Score=28.46  Aligned_cols=24  Identities=21%  Similarity=0.462  Sum_probs=18.7

Q ss_pred             CCce--ecCCCeeeecCCCccccCCC
Q psy11797         43 FSCK--NLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        43 ~~C~--n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ++|+  ...+.+.|.|+.||+|..++
T Consensus        23 G~C~~i~~~~~~~C~C~~gy~G~RCe   48 (50)
T 2rnl_A           23 GECKYIEHLEAVTCKCQQEYFGERCG   48 (50)
T ss_dssp             SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred             CEEEEecCCCCeeEECCCCccccccc
Confidence            4665  34567899999999998776

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=87.82  E-value=0.55  Score=32.14  Aligned_cols=32  Identities=28%  Similarity=0.848  Sum_probs=24.5

Q ss_pred             CCC-CCeeee-CCCcceeecCCCceeCCCCCCcccC
Q psy11797         99 SCA-NGRCVN-LEGSYRCECERGFKLSLDGKQCLGK  132 (249)
Q Consensus        99 ~C~-~g~C~~-~~g~~~C~C~~G~~~~~~g~~C~~~  132 (249)
                      .|. ++.|.+ ..+.+.|+|.+||..  ++..|..+
T Consensus        11 ~C~~NA~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~   44 (99)
T 1ob1_C           11 QCPQNSGCFRHLDEREECKCLLNYKQ--EGDKCVEN   44 (99)
T ss_dssp             CCCTTEEEECCTTSCCEEEECTTEEE--ETTEEEEC
T ss_pred             CCCCCCCeEEcCCCCEEEEecCCeec--CCCeEeeC
Confidence            344 678988 578899999999984  46778763

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=86.84  E-value=0.95  Score=33.38  Aligned_cols=28  Identities=14%  Similarity=0.337  Sum_probs=20.3

Q ss_pred             CCCCCCceec--CCCe-eeecCCCccccCCC
Q psy11797         39 NTCKFSCKNL--IGSY-MCTCPPGYQQVTHS   66 (249)
Q Consensus        39 ~~c~~~C~n~--~gsy-~C~C~~G~~g~~~~   66 (249)
                      +.++++|+..  ...| .|.|++||.|..++
T Consensus        15 C~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Ce   45 (145)
T 2i9a_A           15 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   45 (145)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred             CCCCCCcCCCccccCCccccCCCCCCCCcee
Confidence            4445677654  2456 89999999997776

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=86.58  E-value=0.5  Score=40.94  Aligned_cols=36  Identities=11%  Similarity=0.358  Sum_probs=30.9

Q ss_pred             CCccCCCCCCCCCCceecCCCeeeecCC-CccccCCC
Q psy11797         31 VDECRTPANTCKFSCKNLIGSYMCTCPP-GYQQVTHS   66 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n~~gsy~C~C~~-G~~g~~~~   66 (249)
                      .+.|...++..+++|++...+|.|.|+. ||.|..|+
T Consensus       185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~  221 (410)
T 3asi_A          185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN  221 (410)
T ss_dssp             SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred             CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence            3678887777789999999999999996 99998876

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=85.66  E-value=0.54  Score=27.95  Aligned_cols=24  Identities=25%  Similarity=0.530  Sum_probs=18.5

Q ss_pred             CCceec--CCCeeeecCCCccccCCC
Q psy11797         43 FSCKNL--IGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        43 ~~C~n~--~gsy~C~C~~G~~g~~~~   66 (249)
                      ++|.-.  ...+.|.|++||+|..++
T Consensus        19 G~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 3e50_C           19 GTCRFLVQEDKPACVCHSGYVGARCE   44 (50)
T ss_pred             CEEeeccCCCCeEEECCCCCcccCCC
Confidence            366542  356899999999998876

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=82.54  E-value=0.56  Score=34.55  Aligned_cols=35  Identities=37%  Similarity=1.001  Sum_probs=28.5

Q ss_pred             cccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         91 NECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        91 ~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ++|.  ..+|. ++.|.+..+.|.|.|.+||.    |..|+.
T Consensus       120 ~~~~--~~pc~~~g~C~~~~~~~~c~C~~g~~----g~~Ce~  155 (157)
T 1g1t_A          120 AACT--NTSCSGHGECVETINNYTCKCDPGFS----GLKCEQ  155 (157)
T ss_dssp             CCCC--TTGGGGSEEEEEETTEEEEEECTTEE----STTSCE
T ss_pred             CCCC--CCCCCCCCEeecCCCCeeEECCCCcc----Cccccc
Confidence            4454  36777 57999999999999999999    888865

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=82.17  E-value=2  Score=31.66  Aligned_cols=29  Identities=34%  Similarity=0.842  Sum_probs=23.0

Q ss_pred             CCCC-CeeeeC--CCcc-eeecCCCceeCCCCCCccc
Q psy11797         99 SCAN-GRCVNL--EGSY-RCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        99 ~C~~-g~C~~~--~g~~-~C~C~~G~~~~~~g~~C~~  131 (249)
                      +|.| |.|+..  ...| +|.|++||.    |+.|+.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~----G~~Cei   46 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCEI   46 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEE----STTSCE
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCC----CCceec
Confidence            6775 599875  3566 899999999    899975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	249
d1apja_	74	g.23.1.1 (A:) Fibrillin {Human (Homo sapiens) [Tax	6e-14
d1uzka3	76	g.23.1.1 (A:1529-1604) Fibrillin {Human (Homo sapi	5e-12
d1ksqa_	75	g.23.1.1 (A:) Transforming growth factor-beta bind	1e-10
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	2e-10
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	8e-05
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	3e-10
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	8e-05
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	1e-08
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	5e-05
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	1e-07
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	2e-05
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	1e-07
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	9e-05
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	2e-07
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	7e-06
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	7e-06
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	0.002
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	1e-05
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	5e-04
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	2e-05
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	0.004
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	3e-05
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	3e-05
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	1e-04
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	6e-05
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	7e-05
d3bpse1	40	g.3.11.1 (E:293-332) Low density lipoprotein (LDL)	1e-04
d3bpse1	40	g.3.11.1 (E:293-332) Low density lipoprotein (LDL)	3e-04
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	6e-04
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	7e-04
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	0.001
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	0.004

>d1apja_ g.23.1.1 (A:) Fibrillin {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Fibrillin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (153), Expect = 6e-14
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 157 QRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCTM-GMAWGPQCQLCPTRGSQEYTDLC 215
            R+ +CY     G+C  P         ++ +CCC + G  WG  C+LCPT   + +  +C
Sbjct: 5   LRMSYCYAKFEGGKCSSP----KSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQIC 60

Query: 216 LE-SGLTVDGRD 226
              SG+ V   D
Sbjct: 61  PYGSGIIVGPDD 72

>d1uzka3 g.23.1.1 (A:1529-1604) Fibrillin {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Fibrillin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 5e-12
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 158 RLGFCYRSLTNGRCVLPT--GPALLMEVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLC 215
           R G CY  +        T     + + V++  CCC++G AWG  C++CP   + EY  LC
Sbjct: 2   RSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILC 61

>d1ksqa_ g.23.1.1 (A:) Transforming growth factor-beta binding protein-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 75

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Transforming growth factor-beta binding protein-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (130), Expect = 1e-10
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)

Query: 160 GFCYRSLTNGR-CVLPTGPALLMEVTRMDCCCTMGMAWGPQCQL--CPTRGSQEYTDLCL 216
             CY +L +   C       L   VT+ +CCCT G  WG  C++  CP  G+ E+T++C 
Sbjct: 10  KECYYNLNDASLCDNV----LAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMCP 65

Query: 217 E-SGLTVDG 224
           +  G    G
Sbjct: 66  KGKGFVPAG 74

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (127), Expect = 2e-10
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL 130
           D++EC+ +   C  G C N EGSYRCEC  G +LS +   C+
Sbjct: 1   DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 8e-05
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 30 DVDECRTPANTCKFS-CKNLIGSYMCTCPPGYQ 61
          D+DEC+     C+   C N  GSY C CPPG+Q
Sbjct: 1  DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQ 33

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 3e-10
 Identities = 15/41 (36%), Positives = 25/41 (60%)

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           D++EC+     C  G+C+N  GS++C C  G+ L+ D + C
Sbjct: 2   DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 8e-05
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 30 DVDECRTPANTCKFS-CKNLIGSYMCTCPPGYQ 61
          D+DEC+     C+   C N  GS+ C CP GY 
Sbjct: 2  DIDECQELPGLCQGGKCINTFGSFQCRCPTGYY 34

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (113), Expect = 1e-08
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLS-LDGKQCL 130
           D++EC ++ D C  G+CVN  G + C+C+ G++   +  K C+
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (88), Expect = 5e-05
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 30 DVDECRTPANTCKFS-CKNLIGSYMCTCPPGYQ 61
          D+DECR   + C    C N  G + C C  GY+
Sbjct: 2  DIDECRISPDLCGRGQCVNTPGDFECKCDEGYE 34

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (107), Expect = 1e-07
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           DVNEC     +C +G CVN  GSY C+C   F+L+     C
Sbjct: 2   DVNECLDP-TTCISGNCVNTPGSYICDCPPDFELNPTRVGC 41

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 2e-05
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQ 61
          DV+EC  P      +C N  GSY+C CPP ++
Sbjct: 2  DVNECLDPTTCISGNCVNTPGSYICDCPPDFE 33

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (107), Expect = 1e-07
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 7/49 (14%)

Query: 88  VDVNECELNLDSCANG-------RCVNLEGSYRCECERGFKLSLDGKQC 129
           VD++EC     S            C N  G Y C C  G++L  D   C
Sbjct: 2   VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 9e-05
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 8/41 (19%)

Query: 29 IDVDECRTPANTCKFS--------CKNLIGSYMCTCPPGYQ 61
          +D+DEC + + + +          C N +G Y C+C PGY+
Sbjct: 2  VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYE 42

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (104), Expect = 2e-07
 Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 87  CVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
            VD++EC+   D C +G+C+N +GSYRCEC  G+   L G +C
Sbjct: 2   AVDMDECKEP-DVCKHGQCINTDGSYRCECPFGYI--LAGNEC 41

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 7e-06
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQ 61
          +D+DEC+ P       C N  GSY C CP GY 
Sbjct: 3  VDMDECKEPDVCKHGQCINTDGSYRCECPFGYI 35

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (93), Expect = 7e-06
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 90  VNECELNLDSCA--NGRCVNLEGSYRCECERGFKLSLDGKQC 129
           ++EC++        +  C N  G + C C  G+ L  + + C
Sbjct: 1   IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTC 42

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (76), Expect = 0.002
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 3/34 (8%)

Query: 31 VDECRTPANT---CKFSCKNLIGSYMCTCPPGYQ 61
          +DEC+        C   C N +G + C+C  GY 
Sbjct: 1  IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYV 34

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 1e-05
 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)

Query: 90  VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           ++EC+   D+C +  CVNLEG Y+C+CE GF+L    K C
Sbjct: 1   IDECQDP-DTC-SQLCVNLEGGYKCQCEEGFQLDPHTKAC 38

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 5e-04
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 31 VDECRTPANTCKFSCKNLIGSYMCTCPPGYQ 61
          +DEC+ P +TC   C NL G Y C C  G+Q
Sbjct: 1  IDECQDP-DTCSQLCVNLEGGYKCQCEEGFQ 30

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.1 bits (91), Expect = 2e-05
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 90  VNECELNLDSCA--NGRCVNLEGSYRCECERGFKLSLDGKQC 129
           V+EC  +L      +  C N  G Y C C  G+ L  +   C
Sbjct: 1   VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTC 42

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 32.2 bits (73), Expect = 0.004
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)

Query: 31 VDECRTP---ANTCKFSCKNLIGSYMCTCPPGYQ 61
          VDECRT    +  C   C N +G Y C+C  GY 
Sbjct: 1  VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYI 34

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (89), Expect = 3e-05
 Identities = 14/39 (35%), Positives = 17/39 (43%)

Query: 91  NECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
           NEC   +D   +  C N  G Y C C   + L  D K C
Sbjct: 1   NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 3e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQ 61
          D+DEC      C   C NL G++ C C P   
Sbjct: 1  DIDECENG-GFCSGVCHNLPGTFECICGPDSA 31

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 89  DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSL-DGKQC 129
           D++ECE       +G C NL G++ C C     L+   G  C
Sbjct: 1   DIDECENG--GFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 6e-05
 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 89  DVNECELNLDSCAN-GRCVNLEGSYRCECERGF 120
           DV+EC L  + C + G+C+N  GS+ C+C +G+
Sbjct: 2   DVDECSLGANPCEHAGKCINTLGSFECQCLQGY 34

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 7e-05
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 30 DVDECRTPANTCKF--SCKNLIGSYMCTCPPGYQ 61
          DVDEC   AN C+    C N +GS+ C C  GY 
Sbjct: 2  DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT 35

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (84), Expect = 1e-04
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 90  VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQC 129
            NEC  N   C++  C +L+  Y C C  GF+L    ++C
Sbjct: 2   TNECLDNNGGCSH-VCNDLKIGYECLCPDGFQLV-AQRRC 39

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (82), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 31 VDECRTPANTCKFSCKNLIGSYMCTCPPGYQ 61
           +EC      C   C +L   Y C CP G+Q
Sbjct: 2  TNECLDNNGGCSHVCNDLKIGYECLCPDGFQ 32

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 6e-04
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 93  CELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQF 135
           C L+   C    C   + S  C C RG+ L+ +GK C+  G +
Sbjct: 3   CSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPY 44

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 7e-04
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 93  CELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQF 135
           C L+   C +  C+   G  RC C  G+KL  D  QC    +F
Sbjct: 2   CSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 34.0 bits (78), Expect = 0.001
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 93  CELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQF 135
           C L+   C    C       RC C  G+ L  D K C+   +F
Sbjct: 1   CSLDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.004
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)

Query: 29 IDVDECRTPANTCKF--SCKNLIGSYMCTCPPGYQ 61
          +D D+C +  N C    SCK+ I SY C CP G++
Sbjct: 1  VDGDQCES--NPCLNGGSCKDDINSYECWCPFGFE 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	249
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	99.02
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.99
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.93
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.91
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.9
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.88
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.86
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.8
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.77
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.76
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.76
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.74
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.74
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.73
d1szba2	45	Mannose-binding protein associated serine protease	98.73
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.73
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.72
d1nt0a3	45	Mannose-binding protein associated serine protease	98.71
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.71
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.68
d1szba2	45	Mannose-binding protein associated serine protease	98.64
d1nt0a3	45	Mannose-binding protein associated serine protease	98.63
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.62
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.62
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.58
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.54
d1apja_	74	Fibrillin {Human (Homo sapiens) [TaxId: 9606]}	98.51
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.48
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.42
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	98.4
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	98.4
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	98.4
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.39
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.37
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.32
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.3
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.27
d1ksqa_	75	Transforming growth factor-beta binding protein-1	98.23
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.23
d1uzka3	76	Fibrillin {Human (Homo sapiens) [TaxId: 9606]}	98.17
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.08
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.04
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.04
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.02
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.99
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	97.98
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.93
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.93
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	97.91
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.91
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	97.89
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.88
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	97.85
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.84
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	97.83
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	97.76
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.72
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.61
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.6
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.5
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	97.42
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.4
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.37
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.21
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.17
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	96.9
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.86
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	96.84
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	96.64
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.6
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.37
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	95.11
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	94.99
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	94.54
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	92.38
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	90.97
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	90.27
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	89.03
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	87.77
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	86.94
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	86.51
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	84.83

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=5.8e-11  Score=68.36  Aligned_cols=42  Identities=45%  Similarity=0.953  Sum_probs=37.6

Q ss_pred             cCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         89 DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      |||||+..+..|.++.|+|++|+|+|.|++||.+..+++.|.
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~~~Cv   42 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI   42 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCCCccC
Confidence            689999878889888999999999999999999888887763

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=6e-11  Score=68.67  Aligned_cols=43  Identities=35%  Similarity=0.861  Sum_probs=38.0

Q ss_pred             ecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         88 VDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        88 ~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      +|||||+..++.|.++.|+|++|+|+|.|++||.+..++++|+
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~~~Ce   43 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD   43 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCCCccC
Confidence            4899999777788767999999999999999999998888774

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=3.3e-10  Score=65.55  Aligned_cols=38  Identities=37%  Similarity=0.835  Sum_probs=32.6

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      .|||||+.....+.+.|+|++|+|.|.|++||++....
T Consensus         1 TDidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~   38 (43)
T d1uzka1           1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTR   38 (43)
T ss_dssp             CCCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTS
T ss_pred             CCccccCCCCcCcCCEeECCCCCEEEecCCCCEECCCC
Confidence            47889987766777899999999999999999987655

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=3.8e-10  Score=65.13  Aligned_cols=36  Identities=42%  Similarity=0.822  Sum_probs=29.0

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccC
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVT   64 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~   64 (249)
                      +|||||+..++.+.++|+|++|+|.|.|++||++..
T Consensus         3 vDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g   38 (43)
T d1emoa1           3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAG   38 (43)
T ss_dssp             CCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEESS
T ss_pred             cceeccCCcCCCCCCEeECCCCCeEeECCCCcccCC
Confidence            466777666566668899999999999999998754

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=6.8e-10  Score=64.21  Aligned_cols=43  Identities=42%  Similarity=0.893  Sum_probs=36.1

Q ss_pred             ecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         88 VDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        88 ~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +|||||+.. ..+.++.|+|++|+|+|.|++||.+..+++.|++
T Consensus         1 TDidEC~~~-~~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1           1 TDVNECLDP-TTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD   43 (43)
T ss_dssp             CCCCGGGST-TSSBTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred             CCccccCCC-CcCcCCEeECCCCCEEEecCCCCEECCCCCcccC
Confidence            379999874 3444569999999999999999999998888864

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=7e-10  Score=64.11  Aligned_cols=42  Identities=36%  Similarity=1.028  Sum_probs=35.8

Q ss_pred             ecCcccccCCCCCCCCeeeeCCCcceeecCCCceeC-CCCCCc
Q psy11797         88 VDVNECELNLDSCANGRCVNLEGSYRCECERGFKLS-LDGKQC  129 (249)
Q Consensus        88 ~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~-~~g~~C  129 (249)
                      +|||||+..+..|.++.|+|++|+|+|.|++||.+. .+++.|
T Consensus         1 TDidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~~~g~~C   43 (44)
T d1lmja1           1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC   43 (44)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSE
T ss_pred             CcccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCCCCCCcC
Confidence            389999987778887799999999999999999975 356666

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=1e-09  Score=62.65  Aligned_cols=40  Identities=48%  Similarity=1.124  Sum_probs=36.0

Q ss_pred             CcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         90 VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ||||+. +++|.+ .|+|+.|+|+|.|++||.|..++++|++
T Consensus         1 idEC~~-~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~~C~a   40 (41)
T d1i0ua2           1 IDECQD-PDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACKA   40 (41)
T ss_dssp             CCTTTT-TTSCSS-CEECSSSCCEECCCTTEEECTTTCCEEE
T ss_pred             CccCCC-CCCCCC-EeECCCCCEEeECCCCCeECCCCCcccc
Confidence            678875 578986 8999999999999999999999999976

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=5.5e-10  Score=64.15  Aligned_cols=37  Identities=43%  Similarity=0.910  Sum_probs=31.4

Q ss_pred             CCCccCCCCCCCC-CCceecCCCeeeecCCCccccCCC
Q psy11797         30 DVDECRTPANTCK-FSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        30 did~C~~~~~~c~-~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      |||||+..+..|. ++|+|++|||+|.|++||++....
T Consensus         1 DidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~   38 (42)
T d1lmja2           1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNI   38 (42)
T ss_dssp             ECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSS
T ss_pred             CccccCCCCCCCCCCEeECCCCCeEEeCCCCCeECcCC
Confidence            6788888777776 699999999999999999976543

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.8e-09  Score=62.32  Aligned_cols=36  Identities=36%  Similarity=0.839  Sum_probs=31.4

Q ss_pred             CCCCccCCCCCCCC-CCceecCCCeeeecCCCccccC
Q psy11797         29 IDVDECRTPANTCK-FSCKNLIGSYMCTCPPGYQQVT   64 (249)
Q Consensus        29 ~did~C~~~~~~c~-~~C~n~~gsy~C~C~~G~~g~~   64 (249)
                      .|||||+..+..|. ++|+|++|||+|.|++||+++.
T Consensus         1 TDidEC~~~~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECT
T ss_pred             CcccccCCCCCCCCCCEeEcCCCCeEEeCCCCCccCC
Confidence            47899988877776 7999999999999999999853

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.2e-09  Score=60.98  Aligned_cols=38  Identities=34%  Similarity=0.631  Sum_probs=30.3

Q ss_pred             CCCCccCCC--CCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         29 IDVDECRTP--ANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        29 ~did~C~~~--~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +|||||+..  ++..+++|+++.++|+|.|++||+|..++
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce   40 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCE   40 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSC
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCCCCc
Confidence            477888744  34444899999999999999999997765

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=6.8e-10  Score=64.09  Aligned_cols=38  Identities=37%  Similarity=0.862  Sum_probs=31.3

Q ss_pred             CCCCccCCCCCCCC-CCceecCCCeeeecCCCccccCCC
Q psy11797         29 IDVDECRTPANTCK-FSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        29 ~did~C~~~~~~c~-~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +|||||+..+..|. ++|+|++|+|+|.|++||++....
T Consensus         1 qDinEC~~~~~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~   39 (43)
T d1uzka2           1 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDT   39 (43)
T ss_dssp             EECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTT
T ss_pred             CCcccccCCCCCcCCCEEECCCCCeEeECCCCCeECcCC
Confidence            37788887666665 789999999999999999886544

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=3.9e-09  Score=60.18  Aligned_cols=35  Identities=43%  Similarity=0.991  Sum_probs=30.6

Q ss_pred             CCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         31 VDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ||||+. +..|.+.|+|++|+|+|.|++||++....
T Consensus         1 idEC~~-~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~   35 (41)
T d1i0ua2           1 IDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHT   35 (41)
T ss_dssp             CCTTTT-TTSCSSCEECSSSCCEECCCTTEEECTTT
T ss_pred             CccCCC-CCCCCCEeECCCCCEEeECCCCCeECCCC
Confidence            688874 57888999999999999999999987765

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=4.5e-09  Score=63.59  Aligned_cols=44  Identities=34%  Similarity=0.727  Sum_probs=36.3

Q ss_pred             ecCcccccCCCCCC-------CCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         88 VDVNECELNLDSCA-------NGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        88 ~~i~~C~~~~~~C~-------~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +|||||+.....|.       ...|+|++|+|+|.|++||+|..++++|+.
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~~   52 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA   52 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCceec
Confidence            58899987555442       127999999999999999999999999875

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=4.8e-09  Score=60.19  Aligned_cols=40  Identities=40%  Similarity=1.048  Sum_probs=35.2

Q ss_pred             ecCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         88 VDVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        88 ~~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +||+||+..+++|. +|+|+++.++|+|.|++||.    |++|+.
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~----G~~Ce~   41 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCEI   41 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSCE
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCc----CCCCcC
Confidence            47999997778999 57999999999999999999    888863

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=4.6e-09  Score=61.21  Aligned_cols=41  Identities=27%  Similarity=0.827  Sum_probs=34.5

Q ss_pred             CcccccCCC---CCCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         90 VNECELNLD---SCANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~~~~---~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ||||+...+   .|.+ .|+|++|+|+|.|++||.|..++++|.+
T Consensus         1 IdEC~~~~~~~~~C~~-~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCC-CCccCCCCeEEECCCCCeECCCCCCccC
Confidence            578876444   3544 8999999999999999999999999976

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.9e-09  Score=61.32  Aligned_cols=42  Identities=45%  Similarity=1.123  Sum_probs=33.1

Q ss_pred             ceecCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         86 ECVDVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        86 ~C~~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      +|+|||||+... .+.++.|+|++|+|.|.|++||.+.  ++.|.
T Consensus         1 sCvDidEC~~~~-~~~~~~C~Nt~Gsy~C~C~~Gy~~~--g~~C~   42 (43)
T d1emoa1           1 SAVDMDECKEPD-VCKHGQCINTDGSYRCECPFGYILA--GNECV   42 (43)
T ss_dssp             CCCCCCSSSSTT-SCSSSCCCCCSSCCCCCCCTTEEES--SSCEE
T ss_pred             CCcceeccCCcC-CCCCCEeECCCCCeEeECCCCcccC--CCccc
Confidence            378999998643 3335699999999999999999973  55665

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=4.4e-09  Score=59.18  Aligned_cols=38  Identities=34%  Similarity=0.644  Sum_probs=32.7

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +|+|+|.++|+..+++|++..++|+|.|++||+|..++
T Consensus         1 id~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CCCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             CccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            47788888887778888888999999999999997765

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.71  E-value=4.3e-09  Score=61.30  Aligned_cols=41  Identities=34%  Similarity=0.848  Sum_probs=32.5

Q ss_pred             CcccccCCC---CCCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         90 VNECELNLD---SCANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~~~~---~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ||||+...+   +|.+ .|+|++|+|+|.|++||.|..++++|..
T Consensus         1 IdEC~~~~~~~~~C~~-~C~Nt~gsy~C~C~~Gy~L~~d~~tC~~   44 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDH-YCHNYLGGYYCSCRVGYILHQNKHTCSA   44 (45)
T ss_dssp             CCTTC-------CCSS-EEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CcCCccCCCCcCCCCC-EeecCCCCEEEeCCCCCEECCCCCcccc
Confidence            578875433   3655 8999999999999999999999999875

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=5.6e-09  Score=63.16  Aligned_cols=26  Identities=38%  Similarity=1.159  Sum_probs=22.7

Q ss_pred             CCCCceecCCCeeeecCCCccccCCC
Q psy11797         41 CKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        41 c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      |.+.|+|++|||+|+|++||++....
T Consensus        22 c~~~C~Nt~GsY~C~C~~Gy~l~~d~   47 (53)
T d1apqa_          22 CQHLCHNYVGGYFCSCRPGYELQEDR   47 (53)
T ss_dssp             TSSEEEEETTEEEEECSTTCEECTTS
T ss_pred             ccCEeEcCCCCeEeECCCCCeECCCC
Confidence            45689999999999999999987655

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.68  E-value=4.6e-09  Score=58.35  Aligned_cols=36  Identities=31%  Similarity=0.671  Sum_probs=30.1

Q ss_pred             CCCccCCCCCCCCCCceecCCCeeeecCCCccccCC
Q psy11797         30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTH   65 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~   65 (249)
                      |+|+|.++|+..+++|++..++|.|.|++||+|..+
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~C   36 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNC   36 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTS
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCcCCCC
Confidence            567777777777788888889999999999999765

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.1e-08  Score=59.51  Aligned_cols=36  Identities=33%  Similarity=0.949  Sum_probs=29.7

Q ss_pred             CCccCCCCC---CCCCCceecCCCeeeecCCCccccCCC
Q psy11797         31 VDECRTPAN---TCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        31 id~C~~~~~---~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ||||+..+.   .|.+.|+|++|+|+|.|++||++....
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~   39 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNK   39 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTS
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCC
Confidence            577776543   467899999999999999999987765

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.63  E-value=8.9e-09  Score=59.94  Aligned_cols=36  Identities=42%  Similarity=0.975  Sum_probs=27.5

Q ss_pred             CCccCCCCC---CCCCCceecCCCeeeecCCCccccCCC
Q psy11797         31 VDECRTPAN---TCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        31 id~C~~~~~---~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ||||+..+.   .|.+.|+|++|+|+|.|++||++....
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~d~   39 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNK   39 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTS
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECCCC
Confidence            577776533   477899999999999999999987665

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.5e-08  Score=56.89  Aligned_cols=36  Identities=33%  Similarity=0.790  Sum_probs=30.7

Q ss_pred             CCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         31 VDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ||+|.++|+..+++|++..++|+|.|++||+|..++
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCe
Confidence            577777777777888888899999999999998776

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=2.6e-09  Score=60.06  Aligned_cols=34  Identities=35%  Similarity=0.832  Sum_probs=29.3

Q ss_pred             CCCccCCCCCCCCCCceecCCCeeeecCCCccccC
Q psy11797         30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVT   64 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~   64 (249)
                      |||||+. ++.|.+.|+|++|+|+|.|++||++..
T Consensus         1 DidEC~~-~~~C~~~C~N~~Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3           1 DIDECEN-GGFCSGVCHNLPGTFECICGPDSALAG   34 (40)
T ss_dssp             ECCHHHH-CSSCSSEEEECSSSEEEEECSSSSCEE
T ss_pred             CccccCC-CcCccCEeeCCCCCeEeECCCCCeeCC
Confidence            6788875 377889999999999999999998753

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=2.5e-08  Score=56.86  Aligned_cols=40  Identities=35%  Similarity=0.595  Sum_probs=33.8

Q ss_pred             cccccC-CCCCCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         91 NECELN-LDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        91 ~~C~~~-~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      |||+.. .+.|.+ .|+|++|+|+|.|++||.|..++++|..
T Consensus         1 dEC~~~~~~~C~~-~C~n~~Gsy~C~C~~Gy~L~~d~~tC~~   41 (42)
T d1nzia2           1 NECTDFVDVPCSH-FCNNFIGGYFCSCPPEYFLHDDMKNCGV   41 (42)
T ss_dssp             CTTTC-CCCCSSS-EEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred             CCCCCCCCcCCCC-EeecCCCCEEEeCCCCCEECCCCCeecC
Confidence            567642 367887 8999999999999999999999999864

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=9.2e-09  Score=57.75  Aligned_cols=33  Identities=36%  Similarity=0.814  Sum_probs=29.2

Q ss_pred             cCcccccCCCCCCCCeeeeCCCcceeecCCCceeC
Q psy11797         89 DVNECELNLDSCANGRCVNLEGSYRCECERGFKLS  123 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~  123 (249)
                      |||||+. +++|.+ .|+|++|+|+|.|++||.+.
T Consensus         1 DidEC~~-~~~C~~-~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECEN-GGFCSG-VCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             ECCHHHH-CSSCSS-EEEECSSSEEEEECSSSSCE
T ss_pred             CccccCC-CcCccC-EeeCCCCCeEeECCCCCeeC
Confidence            6899986 578986 99999999999999999864

>d1apja_ g.23.1.1 (A:) Fibrillin {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Fibrillin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=4.4e-09  Score=67.72  Aligned_cols=66  Identities=33%  Similarity=0.970  Sum_probs=53.4

Q ss_pred             CccccccccCCCCcccCCCCCCccCCCCcceeecC-CCCccCCCCccCCCCCCchhhccCCC-CCccCCCCC
Q psy11797        157 QRLGFCYRSLTNGRCVLPTGPALLMEVTRMDCCCT-MGMAWGPQCQLCPTRGSQEYTDLCLE-SGLTVDGRD  226 (249)
Q Consensus       157 ~~~~~C~~~~~~~~C~c~~g~~~~~~~~~~~C~C~-~g~~~g~~C~~C~~~~~~~~~c~Cp~-~G~~~~~~d  226 (249)
                      .+.+.|+..+...+|.-+..    ..+++.+|.|. .|.+||..|++||.+++..|.-+||. +||+.++.|
T Consensus         5 ~R~~~Cy~~~~~g~C~~~l~----~~~tk~~CCCs~~G~aWG~~Ce~CP~~~t~ef~~LCP~G~Gf~~~~~d   72 (74)
T d1apja_           5 LRMSYCYAKFEGGKCSSPKS----RNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPYGSGIIVGPDD   72 (74)
T ss_dssp             GCEEEEEEEECSSCEEEEEE----EEEEHHHHHTTSCCSEETTTTEECCCTTSHHHHHHCSSCSCSSCCTTS
T ss_pred             cccchhhhcccCCCCCCcCC----CCeEehhcCCCCCCCCcCCcccCCCCCCCHHHHHhCCCCCCccCCCcC
Confidence            56788888777777754322    13788899998 59999999999999999999999987 999987655

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=3.2e-08  Score=55.82  Aligned_cols=39  Identities=36%  Similarity=0.813  Sum_probs=33.6

Q ss_pred             CcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         90 VNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        90 i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      +|||+...+.|.| .|+|++++|+|.|++||.|. ++++|+
T Consensus         2 ~neC~~~nggC~h-~C~n~~g~~~C~C~~Gy~L~-d~~tC~   40 (40)
T d3bpse1           2 TNECLDNNGGCSH-VCNDLKIGYECLCPDGFQLV-AQRRCE   40 (40)
T ss_dssp             SCGGGTGGGGCSS-EEEECSSSEEEECCTTCCEE-TTTEEC
T ss_pred             cccCCCCCCCCcC-EEEcCCCCEEEECCCCCEEC-CCCcCC
Confidence            5788877788987 99999999999999999985 667764

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=1e-07  Score=52.05  Aligned_cols=35  Identities=26%  Similarity=0.643  Sum_probs=29.1

Q ss_pred             CccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         32 DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      |+|.++|+..+++|++..++|+|.|++||+|..++
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCCCcC
Confidence            56777777777888888899999999999997653

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.40  E-value=5.9e-08  Score=57.81  Aligned_cols=45  Identities=27%  Similarity=0.606  Sum_probs=38.1

Q ss_pred             ccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCcccee
Q psy11797         94 ELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEFR  139 (249)
Q Consensus        94 ~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~~  139 (249)
                      +...+.|.| .|++++++|+|.|++||.|..++++|++++++..++
T Consensus         2 ~~~NGgC~h-~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~pcG~   46 (51)
T d1kigl_           2 SLDNGGCDQ-FCREERSEVRCSCAHGYVLGDDSKSCVSTERFPCGK   46 (51)
T ss_dssp             CTTTTSSSS-CCCEETTEECCCCCTTEEECTTSSCEEECSSSCTTC
T ss_pred             CCCCCCccc-EeEcCCCcEEeEcCCCCEECCCCCccccCCccCCCC
Confidence            334567887 799999999999999999999999999987775544

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=8.2e-08  Score=56.86  Aligned_cols=43  Identities=35%  Similarity=0.714  Sum_probs=36.0

Q ss_pred             cccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCcc
Q psy11797         93 CELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFV  136 (249)
Q Consensus        93 C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~  136 (249)
                      |+...+.|.+ .|++++++|+|.|+.||.|..|+++|++++++.
T Consensus         2 C~~~NGgC~~-~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~~p   44 (50)
T d1autl2           2 CSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFP   44 (50)
T ss_dssp             SSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             CCCCCCCccc-EeecCCCCeEEECCCCCEECCCCCccccCCCCC
Confidence            3333466876 899999999999999999999999999876654

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=7e-08  Score=57.42  Aligned_cols=45  Identities=31%  Similarity=0.740  Sum_probs=37.6

Q ss_pred             cccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCcccCCCccce
Q psy11797         93 CELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLGKGQFVEF  138 (249)
Q Consensus        93 C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~~~~~~~~  138 (249)
                      |+...+.|.| .|++++++|+|.|+.||.|..|+++|++++++..+
T Consensus         3 C~~~NGgC~h-~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~~pCG   47 (51)
T d2p3ua1           3 CSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCG   47 (51)
T ss_dssp             GGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESSSSCTT
T ss_pred             cCCCCCCccc-EeecCCCCeEeEcCCCCEECCCCCccccCCccCCC
Confidence            4444567887 89999999999999999999999999997766543

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=8.4e-08  Score=54.01  Aligned_cols=34  Identities=35%  Similarity=0.850  Sum_probs=31.0

Q ss_pred             CCCccCCCCCCCCCCceecCCCeeeecCCCcccc
Q psy11797         30 DVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQV   63 (249)
Q Consensus        30 did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~   63 (249)
                      ++|||...++.|..+|+|++++|+|.|++||++.
T Consensus         1 G~neC~~~nggC~h~C~n~~g~~~C~C~~Gy~L~   34 (40)
T d3bpse1           1 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV   34 (40)
T ss_dssp             CSCGGGTGGGGCSSEEEECSSSEEEECCTTCCEE
T ss_pred             CcccCCCCCCCCcCEEEcCCCCEEEECCCCCEEC
Confidence            4789998888999999999999999999999874

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=1.1e-07  Score=53.24  Aligned_cols=35  Identities=31%  Similarity=0.728  Sum_probs=29.8

Q ss_pred             CccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         32 DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      |+|.++|+..+++|++..++|.|.|++||+|..++
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETTTTC
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcCcCe
Confidence            56777777777888888899999999999998876

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=2.1e-07  Score=52.84  Aligned_cols=35  Identities=37%  Similarity=0.948  Sum_probs=30.0

Q ss_pred             CccCC-CCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         32 DECRT-PANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        32 d~C~~-~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      |||+. ....|.+.|+|++|+|+|.|++||++....
T Consensus         1 dEC~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~   36 (42)
T d1nzia2           1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDM   36 (42)
T ss_dssp             CTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTS
T ss_pred             CCCCCCCCcCCCCEeecCCCCEEEeCCCCCEECCCC
Confidence            67875 346888999999999999999999987765

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.30  E-value=2.5e-07  Score=51.07  Aligned_cols=36  Identities=33%  Similarity=0.839  Sum_probs=31.6

Q ss_pred             cCcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         89 DVNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        89 ~i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      |+|+|..  +||. .|.|++..++|.|.|++||+    |+.|+
T Consensus         1 D~d~C~~--~PC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   37 (37)
T d2c4fl1           1 DGDQCAS--SPCQNGGSCKDQLQSYICFCLPAFE----GRNCE   37 (37)
T ss_dssp             TCCGGGG--CCCCTTCEEEEETTEEEEECCTTEE----STTSC
T ss_pred             CcccCCC--CCCCCCCEEECCCCCeEEECCCCCc----CCCCC
Confidence            5789985  8999 56999999999999999999    88774

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=3.1e-07  Score=51.38  Aligned_cols=36  Identities=44%  Similarity=0.985  Sum_probs=32.0

Q ss_pred             cCcccccCCCCCCC-CeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         89 DVNECELNLDSCAN-GRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        89 ~i~~C~~~~~~C~~-g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      |+|+|..  +||.| |.|++..++|+|.|++||.    |++|+
T Consensus         2 d~d~C~~--~PC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce   38 (39)
T d1edmb_           2 DGDQCES--NPCLNGGSCKDDINSYECWCPFGFE----GKNCE   38 (39)
T ss_dssp             CCCTTTT--CCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred             ccccCCC--CCCCCCcEEEcCCCCEEEECCCCCC----CCCCC
Confidence            6889984  89994 6999999999999999999    88885

>d1ksqa_ g.23.1.1 (A:) Transforming growth factor-beta binding protein-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Transforming growth factor-beta binding protein-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.1e-07  Score=60.87  Aligned_cols=64  Identities=34%  Similarity=0.906  Sum_probs=51.0

Q ss_pred             CccccccccCCC-CcccCCCCCCccCCCCcceeecCCCCccCCCCcc--CCCCCCchhhccCCC-CCccCCC
Q psy11797        157 QRLGFCYRSLTN-GRCVLPTGPALLMEVTRMDCCCTMGMAWGPQCQL--CPTRGSQEYTDLCLE-SGLTVDG  224 (249)
Q Consensus       157 ~~~~~C~~~~~~-~~C~c~~g~~~~~~~~~~~C~C~~g~~~g~~C~~--C~~~~~~~~~c~Cp~-~G~~~~~  224 (249)
                      .....|+..+.. ..|.-+.+    ..+++.+|.|+.|.+||..|++  ||.+++..|.-+||. +||+.++
T Consensus         7 e~r~~Cy~~~~~g~~C~~pl~----~~~Tk~~CCCs~G~aWG~~Cel~~CP~~~s~ef~~LCp~G~G~~~~g   74 (75)
T d1ksqa_           7 EEKKECYYNLNDASLCDNVLA----PNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMCPKGKGFVPAG   74 (75)
T ss_dssp             SCEEEEESSBCTTTTCBCSSC----CEEEHHHHHHTCCSEEEETTEEEECCCSSSHHHHHHCSSCSCCSSSC
T ss_pred             hhhhhHHHHccCCCccCCcCC----ccceeccccCCCCCccCCCCccCcCcCCCcHHHHHhCcCCCCcCcCC
Confidence            345678877654 45765432    2378999999999999999995  999999999999987 8998765

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=5.2e-07  Score=50.35  Aligned_cols=36  Identities=33%  Similarity=0.935  Sum_probs=31.6

Q ss_pred             CcccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         90 VNECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ||+|+.  +||. .|.|++..++|+|.|++||.    |+.|+.
T Consensus         1 Id~C~~--~PC~n~g~C~~~~~~y~C~C~~G~~----G~~Ce~   37 (39)
T d2vj3a2           1 VNECVS--NPCQNDATCLDQIGEFQCICMPGYE----GVHCEV   37 (39)
T ss_dssp             CCTTTT--CCCCSSCEEEECSSCEEEECCTTEE----SSSSCE
T ss_pred             CcCCcC--CCCCCCCEEECCCCCEEEeCCCCCc----cCcCee
Confidence            678884  8999 45999999999999999999    998864

>d1uzka3 g.23.1.1 (A:1529-1604) Fibrillin {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: TB module/8-cys domain
superfamily: TB module/8-cys domain
family: TB module/8-cys domain
domain: Fibrillin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=6.5e-08  Score=62.03  Aligned_cols=43  Identities=37%  Similarity=1.061  Sum_probs=39.1

Q ss_pred             CCCcceeecCCCCccCCCCccCCCCCCchhhccCCC-CCccCCC
Q psy11797        182 EVTRMDCCCTMGMAWGPQCQLCPTRGSQEYTDLCLE-SGLTVDG  224 (249)
Q Consensus       182 ~~~~~~C~C~~g~~~g~~C~~C~~~~~~~~~c~Cp~-~G~~~~~  224 (249)
                      .+++.+|.|+.|.+||..|++||.+++..|.-+||. +||..+.
T Consensus        28 ~~Tk~~CCCs~G~aWG~~Ce~CP~~~t~ef~~LCP~G~Gf~p~~   71 (76)
T d1uzka3          28 GVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNP   71 (76)
T ss_dssp             EECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECT
T ss_pred             ccccccccCCCCCcccCcccCCCCCCCHHHHhhCcCCCCccCCC
Confidence            378899999999999999999999999999999986 8998764

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=5.9e-07  Score=50.19  Aligned_cols=35  Identities=23%  Similarity=0.663  Sum_probs=30.2

Q ss_pred             CccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         32 DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +.|.++|+..+++|++..++|+|.|++||+|..++
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCcCcC
Confidence            56777777777899988999999999999998776

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1e-06  Score=49.42  Aligned_cols=35  Identities=26%  Similarity=0.645  Sum_probs=29.7

Q ss_pred             CccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         32 DECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +.|.++|+..+++|++..++|+|.|++||+|..++
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   36 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE   36 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCccCCCCC
Confidence            46777777777888888899999999999998776

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.6e-06  Score=50.57  Aligned_cols=37  Identities=22%  Similarity=0.419  Sum_probs=30.5

Q ss_pred             CCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         29 IDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        29 ~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      ..+|+|.++|+.. ++|++..++|+|.|++||+|..++
T Consensus         6 p~~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce   42 (48)
T d1autl1           6 PLEHPCASLCCGH-GTCIDGIGSFSCDCRSGWEGRFCQ   42 (48)
T ss_dssp             SSCCSSSSTTTTS-EEECCCSSCCCEEECTTEESTTSC
T ss_pred             CCCCcccCCCCCC-CEEECCCCCCeEeCCCCCcCCCcc
Confidence            3457788777665 688888899999999999998877

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.7e-06  Score=52.46  Aligned_cols=46  Identities=26%  Similarity=0.582  Sum_probs=37.1

Q ss_pred             cccCCCCCCCCeeeeCCC-cceeecCCCceeCCCCCCcccCCCcccee
Q psy11797         93 CELNLDSCANGRCVNLEG-SYRCECERGFKLSLDGKQCLGKGQFVEFR  139 (249)
Q Consensus        93 C~~~~~~C~~g~C~~~~g-~~~C~C~~G~~~~~~g~~C~~~~~~~~~~  139 (249)
                      |+...+.|.| .|+++++ +|+|.|+.||.|..|+++|++++++..++
T Consensus         3 C~~~NGgC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~fpCG~   49 (57)
T d1rfnb_           3 CNIKNGRCEQ-FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPCGR   49 (57)
T ss_dssp             TTGGGGGCSS-EEEECTTSCEEEECCTTEEECTTSSSEEECSSSCTTC
T ss_pred             cCCCCCCccc-EeeeCCCCCeEeECCCCCEECCCCCccccCCCcCCCC
Confidence            4444567887 8999864 89999999999999999999977765443

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.9e-06  Score=46.05  Aligned_cols=34  Identities=41%  Similarity=1.121  Sum_probs=29.0

Q ss_pred             cccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCcc
Q psy11797         91 NECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        91 ~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      |+|.  ++||. +|+|++..++|+|.|++||.    |++|+
T Consensus         1 d~C~--~~PC~ngg~C~~~~~~y~C~C~~g~~----G~~CE   35 (35)
T d2vj3a3           1 DECA--SSPCLHNGRCLDKINEFQCECPTGFT----GHLCQ   35 (35)
T ss_dssp             CTTT--TCCSTTTCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred             CCCC--CCCCCCCcEEECCCCCeEEECCCCCC----CCCcC
Confidence            4676  48999 46999999999999999999    88874

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.98  E-value=2.3e-06  Score=50.68  Aligned_cols=42  Identities=24%  Similarity=0.585  Sum_probs=35.6

Q ss_pred             cCCCCCCCCCCceecCCCeeeecCCCccccCCCcccccccCCccccCCCCCCceecCccc
Q psy11797         34 CRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHSTVAIATTDTRTAESGGKSHECVDVNEC   93 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~C~~i~~C   93 (249)
                      |..+...|...|+++.++|+|.|+.||++....                  ++|++++++
T Consensus         1 C~~~NGgC~h~C~~~~~~~~C~C~~Gy~L~~D~------------------~tC~~~~~~   42 (51)
T d1kigl_           1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDS------------------KSCVSTERF   42 (51)
T ss_dssp             CCTTTTSSSSCCCEETTEECCCCCTTEEECTTS------------------SCEEECSSS
T ss_pred             CCCCCCCcccEeEcCCCcEEeEcCCCCEECCCC------------------CccccCCcc
Confidence            455667888999999999999999999998877                  788877765

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.93  E-value=2.3e-06  Score=48.50  Aligned_cols=36  Identities=22%  Similarity=0.532  Sum_probs=27.5

Q ss_pred             CCccCCCCCCCCCCceec-CCCeeeecCC-CccccCCC
Q psy11797         31 VDECRTPANTCKFSCKNL-IGSYMCTCPP-GYQQVTHS   66 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n~-~gsy~C~C~~-G~~g~~~~   66 (249)
                      ||+|.++++.++++|++. .++|+|.|+. ||+|..++
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcC
Confidence            566666666666777664 5789999986 99998776

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=7.1e-07  Score=50.00  Aligned_cols=22  Identities=18%  Similarity=0.640  Sum_probs=20.7

Q ss_pred             CCceecCCCeeeecCCCccccC
Q psy11797         43 FSCKNLIGSYMCTCPPGYQQVT   64 (249)
Q Consensus        43 ~~C~n~~gsy~C~C~~G~~g~~   64 (249)
                      ++|+|++|+|.|.|++||+|++
T Consensus        13 A~C~Nt~Gsy~C~C~~Gy~GdG   34 (40)
T d1gl4a2          13 AECRDYATGFCCRCVANYTGNG   34 (40)
T ss_dssp             EEEEECSSCEEEEECTTEEECS
T ss_pred             CEeecCCCCeEeECCCCCcCCC
Confidence            7899999999999999999975

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=4e-06  Score=46.61  Aligned_cols=35  Identities=40%  Similarity=1.039  Sum_probs=30.3

Q ss_pred             cccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         91 NECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        91 ~~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      |+|+  ++||. +|.|++..++|.|.|++||.    |++|+.
T Consensus         1 D~C~--~~PC~ngg~C~~~~~~y~C~C~~G~~----G~~Cei   36 (39)
T d1xkba1           1 DQCE--TSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCEL   36 (39)
T ss_dssp             CTTT--TCCCCSSCEECCCSSSCCEECCTTEE----TTTTCE
T ss_pred             CcCC--CCCCCCCcEEECCCCCEEEECCCCCC----cCcCeE
Confidence            4677  48999 46999999999999999999    999865

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=3.4e-06  Score=49.11  Aligned_cols=37  Identities=30%  Similarity=0.866  Sum_probs=32.7

Q ss_pred             cCcccccCCCCCCCCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         89 DVNECELNLDSCANGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        89 ~i~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ..++|..  ++|.||.|++..++|.|.|++||.    |++|+.
T Consensus         7 ~~~~C~~--~PC~nG~C~~~~~~y~C~C~~G~~----G~~Ce~   43 (48)
T d1autl1           7 LEHPCAS--LCCGHGTCIDGIGSFSCDCRSGWE----GRFCQR   43 (48)
T ss_dssp             SCCSSSS--TTTTSEEECCCSSCCCEEECTTEE----STTSCE
T ss_pred             CCCcccC--CCCCCCEEECCCCCCeEeCCCCCc----CCCccc
Confidence            4567884  899999999999999999999999    999976

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=4.8e-06  Score=49.01  Aligned_cols=33  Identities=27%  Similarity=0.707  Sum_probs=28.8

Q ss_pred             cCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         34 CRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      |+.....|.+.|++++++|+|.|+.||++....
T Consensus         2 C~~~NGgC~~~C~~~~g~~~C~C~~Gy~L~~D~   34 (50)
T d1autl2           2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDL   34 (50)
T ss_dssp             SSSGGGGCSSEEEECSSSEEEECCTTEEECTTS
T ss_pred             CCCCCCCcccEeecCCCCeEEECCCCCEECCCC
Confidence            555567888999999999999999999998877

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=6.7e-06  Score=46.26  Aligned_cols=32  Identities=19%  Similarity=0.589  Sum_probs=23.2

Q ss_pred             CCCCCCCCCCceec--CCCeeeecCCCccccCCC
Q psy11797         35 RTPANTCKFSCKNL--IGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        35 ~~~~~~c~~~C~n~--~gsy~C~C~~G~~g~~~~   66 (249)
                      .++|+.++++|++.  .++|+|.|++||+|..++
T Consensus         2 ~~nPC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce   35 (41)
T d1tpga1           2 SEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCE   35 (41)
T ss_dssp             SSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred             cCCCCCCCCEEecCCCCCCeEECCCCCCCCCCcC
Confidence            44455555666554  357999999999998887

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=5.2e-06  Score=48.79  Aligned_cols=39  Identities=26%  Similarity=0.647  Sum_probs=32.0

Q ss_pred             cccccCCCCCCCCeeee------CCCcceeecCCCceeCCCCCCcc
Q psy11797         91 NECELNLDSCANGRCVN------LEGSYRCECERGFKLSLDGKQCL  130 (249)
Q Consensus        91 ~~C~~~~~~C~~g~C~~------~~g~~~C~C~~G~~~~~~g~~C~  130 (249)
                      +||+...+.|.| .|+.      +.++|+|.|+.||.|..++++|.
T Consensus         5 neC~~~NGGC~h-~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           5 ERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGMLLARDMRSCL   49 (50)
T ss_dssp             SSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             cccCCCCCCCcC-ccCCCcCcccCCCCEEEeCCCCCEECCCCCccc
Confidence            566665677887 8974      45799999999999999999985

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=1.7e-06  Score=48.43  Aligned_cols=32  Identities=22%  Similarity=0.826  Sum_probs=26.5

Q ss_pred             CCCC-CCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         98 DSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        98 ~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +.|. ++.|+|++|+|.|.|++||.  .+|..|.+
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~C~~Gy~--GdG~~C~~   39 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCRCVANYT--GNGRQCVA   39 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEE
T ss_pred             CCCCCCCEeecCCCCeEeECCCCCc--CCCCEeeC
Confidence            4566 67999999999999999998  45777764

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=4.9e-06  Score=49.17  Aligned_cols=33  Identities=24%  Similarity=0.665  Sum_probs=28.9

Q ss_pred             cCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         34 CRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      |......|.+.|++++++|.|.|+.||++....
T Consensus         3 C~~~NGgC~h~C~n~~g~~~C~C~~Gy~L~~D~   35 (51)
T d2p3ua1           3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNG   35 (51)
T ss_dssp             GGTGGGGCSSEEEEETTEEEEECCTTEEECTTS
T ss_pred             cCCCCCCcccEeecCCCCeEeEcCCCCEECCCC
Confidence            556667888999999999999999999998776

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=7.1e-06  Score=48.81  Aligned_cols=43  Identities=26%  Similarity=0.680  Sum_probs=34.2

Q ss_pred             cccCCCCCCCCeeeeCCC-cceeecCCCceeCCCCCCcccCCCcc
Q psy11797         93 CELNLDSCANGRCVNLEG-SYRCECERGFKLSLDGKQCLGKGQFV  136 (249)
Q Consensus        93 C~~~~~~C~~g~C~~~~g-~~~C~C~~G~~~~~~g~~C~~~~~~~  136 (249)
                      |+...+.|.| .|+++++ +|+|.|+.||.|..|+++|+.+.++.
T Consensus         2 C~~~NGGC~h-~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~fp   45 (53)
T d2bz6l1           2 CVNENGGCEQ-YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   45 (53)
T ss_dssp             TTSGGGGCSS-EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             CCCCCCCCcC-EeeeCCCCCEEeECCCCCEECCCCCcccCCCccC
Confidence            3433466887 8999876 68999999999999999999865553

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=1.1e-05  Score=45.34  Aligned_cols=35  Identities=17%  Similarity=0.519  Sum_probs=27.3

Q ss_pred             CccCCCCCCCCCCceec-CCCeeeecC-CCccccCCC
Q psy11797         32 DECRTPANTCKFSCKNL-IGSYMCTCP-PGYQQVTHS   66 (249)
Q Consensus        32 d~C~~~~~~c~~~C~n~-~gsy~C~C~-~G~~g~~~~   66 (249)
                      |+|.++|+.++++|++. .++|+|.|+ +||+|..++
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcCcC
Confidence            56777777777778764 578999997 699998776

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=1.5e-05  Score=44.52  Aligned_cols=34  Identities=38%  Similarity=0.957  Sum_probs=29.3

Q ss_pred             ccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         92 ECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        92 ~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .|.  +++|. +|.|++..++|+|.|++||.    |+.|+.
T Consensus         3 ~C~--~~pC~ngg~C~~~~~~y~C~C~~g~~----G~~Ce~   37 (40)
T d1g1sa2           3 SCQ--DMSCSKQGECLETIGNYTCSCYPGFY----GPECEY   37 (40)
T ss_dssp             CCC--TTGGGGSEEEEECSSSEEEEECTTEE----STTSCE
T ss_pred             ccc--CCcCCCCcEEECCCCCeEEeCCCCcc----CCCCCC
Confidence            355  47898 56999999999999999999    999976

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=1.3e-05  Score=44.52  Aligned_cols=34  Identities=38%  Similarity=1.033  Sum_probs=29.2

Q ss_pred             ccccCCCCCC-CCeeeeCCCcceeecCCCceeCCCCCCccc
Q psy11797         92 ECELNLDSCA-NGRCVNLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        92 ~C~~~~~~C~-~g~C~~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .|.  +++|. +|.|++..++|.|.|++||.    |+.|+.
T Consensus         3 ~C~--~~pC~ngg~C~~~~~~~~C~C~~g~~----G~~Ce~   37 (39)
T d1g1ta2           3 ACT--NTSCSGHGECVETINNYTCKCDPGFS----GLKCEQ   37 (39)
T ss_dssp             CCC--TTGGGGSEEEEEETTEEEEEECTTEE----STTSCE
T ss_pred             ccc--CCcCCCCcEEECCCCCEEEeCCCCCc----CcCcCc
Confidence            455  47898 56999999999999999999    999875

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=3.8e-05  Score=40.52  Aligned_cols=32  Identities=41%  Similarity=1.089  Sum_probs=28.1

Q ss_pred             cccccCCCCCCCCeeeeCCCcceeecCCCceeC
Q psy11797         91 NECELNLDSCANGRCVNLEGSYRCECERGFKLS  123 (249)
Q Consensus        91 ~~C~~~~~~C~~g~C~~~~g~~~C~C~~G~~~~  123 (249)
                      |||+. .++|.+|.|.|..|+|.|.|..||..+
T Consensus         2 dECsi-gnpCGnGTCtNviGgFec~C~~GFepg   33 (39)
T d1emoa2           2 DECSV-GNPCGNGTCKNVIGGFECTCEEGFEPG   33 (39)
T ss_dssp             CGGGT-TCSSSSSCEEECSSSEEECCSSSSCCC
T ss_pred             Ccccc-CCccCCceeeecccceEEeecCCcCCC
Confidence            57776 489999999999999999999999844

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=5.3e-05  Score=44.32  Aligned_cols=35  Identities=17%  Similarity=0.543  Sum_probs=26.3

Q ss_pred             CccCCCCCCCCCCce------ecCCCeeeecCCCccccCCC
Q psy11797         32 DECRTPANTCKFSCK------NLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        32 d~C~~~~~~c~~~C~------n~~gsy~C~C~~G~~g~~~~   66 (249)
                      |+|......|...|+      ++.++|+|.|+.||++....
T Consensus         5 neC~~~NGGC~h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~   45 (50)
T d1ijqa2           5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDM   45 (50)
T ss_dssp             SSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTS
T ss_pred             cccCCCCCCCcCccCCCcCcccCCCCEEEeCCCCCEECCCC
Confidence            455555566777775      44579999999999998765

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=2.6e-05  Score=48.25  Aligned_cols=41  Identities=20%  Similarity=0.366  Sum_probs=28.1

Q ss_pred             CcccCCCCCCCCcceeeCCCCCccCCCCCCCCCCceecCCCeeeecCCCccccCCC
Q psy11797         11 VDECRTPANTCKFSCKNLIDVDECRTPANTCKFSCKNLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        11 i~eC~~~~~~c~~~C~~~~did~C~~~~~~c~~~C~n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +|+|..+||.++++|....+               .+..++|.|.|++||+|..|+
T Consensus         6 c~ec~~~~C~NgG~C~~~~~---------------~~~~~~y~C~C~~gy~G~~Ce   46 (63)
T d1haea_           6 CAEKEKTFCVNGGECFMVKD---------------LSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEES---------------SSSSCCEEEECCTTEESTTSC
T ss_pred             CCCCcCCcCCCCCEEeeccc---------------ccCCCCEEeECCCCCCCCCcC
Confidence            45566666666666654311               234578999999999998887

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.37  E-value=7.9e-05  Score=41.91  Aligned_cols=36  Identities=39%  Similarity=0.995  Sum_probs=29.8

Q ss_pred             CcccccCCCCCCC-CeeeeC-CCcceeecCC-CceeCCCCCCccc
Q psy11797         90 VNECELNLDSCAN-GRCVNL-EGSYRCECER-GFKLSLDGKQCLG  131 (249)
Q Consensus        90 i~~C~~~~~~C~~-g~C~~~-~g~~~C~C~~-G~~~~~~g~~C~~  131 (249)
                      |++|..  ++|+| |+|++. .++|.|.|++ ||.    |++|+.
T Consensus         2 id~C~~--nPC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~   40 (42)
T d1q4ga2           2 VNPCCY--YPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCTI   40 (42)
T ss_dssp             CCGGGG--CCCCTTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred             CccCcC--CCCCCCCEeeeCCCCCEEEECCCCCcC----CcCcCc
Confidence            577885  89995 699975 6889999986 899    999875

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00013  Score=43.83  Aligned_cols=33  Identities=27%  Similarity=0.746  Sum_probs=27.5

Q ss_pred             cCCCCCCCCCCceecCC-CeeeecCCCccccCCC
Q psy11797         34 CRTPANTCKFSCKNLIG-SYMCTCPPGYQQVTHS   66 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~g-sy~C~C~~G~~g~~~~   66 (249)
                      |..+...|...|+++++ +|.|.|+.||++....
T Consensus         3 C~~~NGgC~h~C~~~~~~~~~C~C~~Gy~L~~D~   36 (57)
T d1rfnb_           3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQ   36 (57)
T ss_dssp             TTGGGGGCSSEEEECTTSCEEEECCTTEEECTTS
T ss_pred             cCCCCCCcccEeeeCCCCCeEeECCCCCEECCCC
Confidence            55556778899999864 8999999999998776

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00014  Score=38.28  Aligned_cols=30  Identities=47%  Similarity=1.118  Sum_probs=25.6

Q ss_pred             CccCCCCCCCC-CCceecCCCeeeecCCCccc
Q psy11797         32 DECRTPANTCK-FSCKNLIGSYMCTCPPGYQQ   62 (249)
Q Consensus        32 d~C~~~~~~c~-~~C~n~~gsy~C~C~~G~~g   62 (249)
                      |||+.+ ..|+ ++|.|..|+|.|.|..||.-
T Consensus         2 dECsig-npCGnGTCtNviGgFec~C~~GFep   32 (39)
T d1emoa2           2 DECSVG-NPCGNGTCKNVIGGFECTCEEGFEP   32 (39)
T ss_dssp             CGGGTT-CSSSSSCEEECSSSEEECCSSSSCC
T ss_pred             CccccC-CccCCceeeecccceEEeecCCcCC
Confidence            677765 5777 99999999999999999964

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.90  E-value=0.0004  Score=38.67  Aligned_cols=35  Identities=37%  Similarity=1.032  Sum_probs=28.1

Q ss_pred             cccccCCCCCCC-CeeeeC-CCcceeecC-CCceeCCCCCCccc
Q psy11797         91 NECELNLDSCAN-GRCVNL-EGSYRCECE-RGFKLSLDGKQCLG  131 (249)
Q Consensus        91 ~~C~~~~~~C~~-g~C~~~-~g~~~C~C~-~G~~~~~~g~~C~~  131 (249)
                      |+|.  +++|.| |+|++. .++|+|.|+ +||.    |+.|+.
T Consensus         2 d~C~--~~PC~ngG~C~~~~~~~y~C~C~~~gy~----G~~Ce~   39 (41)
T d1cvua2           2 NPCC--SNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTT   39 (41)
T ss_dssp             CTTT--TCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred             CcCc--CCCCCCCCEEEECCCCCEEEeCcCCCcC----CcCcCc
Confidence            4566  479994 699985 688999997 5999    999875

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.86  E-value=0.00057  Score=40.28  Aligned_cols=34  Identities=21%  Similarity=0.368  Sum_probs=23.9

Q ss_pred             ccCCCCCCCCCCceec--CCCeeeecCCCccccCCC
Q psy11797         33 ECRTPANTCKFSCKNL--IGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        33 ~C~~~~~~c~~~C~n~--~gsy~C~C~~G~~g~~~~   66 (249)
                      +|..+++.++++|+..  ..+|+|.|++||+|..++
T Consensus         8 ~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce   43 (53)
T d3egfa_           8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ   43 (53)
T ss_dssp             TTSSCCSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred             CCCCCCCCCCcEeeccCCCCCeEeECCCCCcCCCCc
Confidence            3444445555666543  357999999999998877

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00045  Score=38.44  Aligned_cols=31  Identities=35%  Similarity=0.831  Sum_probs=25.8

Q ss_pred             CCCCCC-CeeeeC--CCcceeecCCCceeCCCCCCccc
Q psy11797         97 LDSCAN-GRCVNL--EGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        97 ~~~C~~-g~C~~~--~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ++||.| |.|++.  .++|+|.|++||.    |++|+.
T Consensus         3 ~nPC~ngG~C~~~~~~~~y~C~C~~g~~----G~~Ce~   36 (41)
T d1tpga1           3 EPRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCEI   36 (41)
T ss_dssp             SCCSCTTCEEEEESSSSCEEEECCTTCB----SSSCCB
T ss_pred             CCCCCCCCEEecCCCCCCeEECCCCCCC----CCCcCc
Confidence            478995 599975  4679999999999    999975

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00077  Score=39.65  Aligned_cols=33  Identities=24%  Similarity=0.696  Sum_probs=27.0

Q ss_pred             cCCCCCCCCCCceecCC-CeeeecCCCccccCCC
Q psy11797         34 CRTPANTCKFSCKNLIG-SYMCTCPPGYQQVTHS   66 (249)
Q Consensus        34 C~~~~~~c~~~C~n~~g-sy~C~C~~G~~g~~~~   66 (249)
                      |..+...|...|+++++ +|.|.|+.||++....
T Consensus         2 C~~~NGGC~h~C~~~~~~~~~C~C~~Gy~L~~D~   35 (53)
T d2bz6l1           2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG   35 (53)
T ss_dssp             TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTS
T ss_pred             CCCCCCCCcCEeeeCCCCCEEeECCCCCEECCCC
Confidence            55555678889999876 5899999999998766

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00046  Score=39.82  Aligned_cols=34  Identities=18%  Similarity=0.333  Sum_probs=24.3

Q ss_pred             ccCCCCCCCCCCceec--CCCeeeecCCCccccCCC
Q psy11797         33 ECRTPANTCKFSCKNL--IGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        33 ~C~~~~~~c~~~C~n~--~gsy~C~C~~G~~g~~~~   66 (249)
                      +|..+++.++++|+..  ..+|+|.|++||+|..++
T Consensus         6 ~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce   41 (48)
T d1nqlb_           6 LSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ   41 (48)
T ss_dssp             STTCCEECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCCCCcEEeeeCCCCCeEEeCCCCcccCCCC
Confidence            3444445555777643  357999999999998877

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.001  Score=40.70  Aligned_cols=38  Identities=37%  Similarity=0.843  Sum_probs=30.8

Q ss_pred             ecCcccccCCCCCCC-Ceee-----eCCCcceeecCCCceeCCCCCCccc
Q psy11797         88 VDVNECELNLDSCAN-GRCV-----NLEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        88 ~~i~~C~~~~~~C~~-g~C~-----~~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      ++.++|..  ++|.| |.|+     +..++|.|.|++||.    |.+|+.
T Consensus         4 ~~c~ec~~--~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~----G~~Ce~   47 (63)
T d1haea_           4 VKCAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTE   47 (63)
T ss_dssp             EECCHHHH--TTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCE
T ss_pred             ccCCCCcC--CcCCCCCEEeecccccCCCCEEeECCCCCC----CCCcCC
Confidence            45677774  79995 6995     456789999999999    999976

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.11  E-value=0.012  Score=34.34  Aligned_cols=31  Identities=35%  Similarity=0.923  Sum_probs=25.4

Q ss_pred             CCCCCC-CeeeeC--CCcceeecCCCceeCCCCCCccc
Q psy11797         97 LDSCAN-GRCVNL--EGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        97 ~~~C~~-g~C~~~--~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .++|.| |+|+..  ...|+|.|++||.    |.+|+.
T Consensus        11 ~~~C~NgG~C~~~~~~~~~~C~C~~gy~----G~~Ce~   44 (53)
T d3egfa_          11 DGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT   44 (53)
T ss_dssp             SCCSCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred             CCCCCCCcEeeccCCCCCeEeECCCCCc----CCCCcc
Confidence            478985 699753  4589999999999    999976

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.008  Score=33.95  Aligned_cols=31  Identities=29%  Similarity=0.752  Sum_probs=25.0

Q ss_pred             CCCCCCCeeee--CCCcceeecCCCceeCCCCCCccc
Q psy11797         97 LDSCANGRCVN--LEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        97 ~~~C~~g~C~~--~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .+.|.||.|..  ....+.|.|+.||.    |.+|+.
T Consensus        11 ~~yC~nG~C~~~~~~~~~~C~C~~gY~----G~RCe~   43 (46)
T d1k36a_          11 NGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCEH   43 (46)
T ss_dssp             CSSCSSEEEEEETTTTEEEEEECTTCS----STTSCC
T ss_pred             CCcCcCCEEEEeCCCCccEeECCCCce----ecCcee
Confidence            36788888863  45679999999999    888875

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.013  Score=33.43  Aligned_cols=31  Identities=29%  Similarity=0.755  Sum_probs=25.2

Q ss_pred             CCCCCC-Ceeee--CCCcceeecCCCceeCCCCCCccc
Q psy11797         97 LDSCAN-GRCVN--LEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        97 ~~~C~~-g~C~~--~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      .++|.| |.|+.  ...+|.|.|++||+    |.+|+.
T Consensus         9 ~~~C~ngG~C~~~~~~~~~~C~C~~gy~----G~~Ce~   42 (48)
T d1nqlb_           9 DGYCLHDGVCMYIEALDKYACNCVVGYI----GERCQY   42 (48)
T ss_dssp             CCEECTTCEEEEETTTTEEEEEECTTEE----STTSCE
T ss_pred             CCCCCCCcEEeeeCCCCCeEEeCCCCcc----cCCCCc
Confidence            367885 69976  34689999999999    999975

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.38  E-value=0.043  Score=30.76  Aligned_cols=24  Identities=25%  Similarity=0.497  Sum_probs=18.5

Q ss_pred             CCce--ecCCCeeeecCCCccccCCC
Q psy11797         43 FSCK--NLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        43 ~~C~--n~~gsy~C~C~~G~~g~~~~   66 (249)
                      +.|.  .....+.|.|++||+|..++
T Consensus        17 G~C~~~~~~~~~~C~C~~gY~G~RCe   42 (46)
T d1k36a_          17 GQCIYLVDMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred             CEEEEeCCCCccEeECCCCceecCce
Confidence            5564  33467999999999998776

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.97  E-value=0.068  Score=30.49  Aligned_cols=27  Identities=15%  Similarity=0.112  Sum_probs=19.5

Q ss_pred             CCCCCce-ecCCCeeeecCCCccccCCC
Q psy11797         40 TCKFSCK-NLIGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        40 ~c~~~C~-n~~gsy~C~C~~G~~g~~~~   66 (249)
                      .+++.|. ...+.+.|.|+.||+|..|+
T Consensus        17 ~nGgcc~~~~~~~~~C~C~~gy~G~rCe   44 (50)
T d1ioxa_          17 IKGRCRFVVAEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             TTCCEEEETTTTEEEECCCTTEETTTTC
T ss_pred             cCCeEEEeCCCCCcEeECCCCCeeCCCc
Confidence            3345553 33456899999999998876

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.27  E-value=0.1  Score=29.68  Aligned_cols=31  Identities=29%  Similarity=0.651  Sum_probs=23.9

Q ss_pred             CCCCCC-ee-eeCCCcceeecCCCceeCCCCCCcccC
Q psy11797         98 DSCANG-RC-VNLEGSYRCECERGFKLSLDGKQCLGK  132 (249)
Q Consensus        98 ~~C~~g-~C-~~~~g~~~C~C~~G~~~~~~g~~C~~~  132 (249)
                      +.|.|| .| +.....+.|.|+.||.    |..|+..
T Consensus        14 ~yC~nGgcc~~~~~~~~~C~C~~gy~----G~rCe~~   46 (50)
T d1ioxa_          14 HYCIKGRCRFVVAEQTPSCVCDEGYI----GARCERV   46 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEE----TTTTCEE
T ss_pred             CCccCCeEEEeCCCCCcEeECCCCCe----eCCCccc
Confidence            578866 45 3455679999999999    9899873

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.03  E-value=0.15  Score=28.87  Aligned_cols=31  Identities=29%  Similarity=0.716  Sum_probs=23.5

Q ss_pred             CCCCCCeee--eCCCcceeecCCCceeCCCCCCcccC
Q psy11797         98 DSCANGRCV--NLEGSYRCECERGFKLSLDGKQCLGK  132 (249)
Q Consensus        98 ~~C~~g~C~--~~~g~~~C~C~~G~~~~~~g~~C~~~  132 (249)
                      +.|.||.|.  .....+.|.|+.||.    |..|+..
T Consensus        13 ~yClnGgcc~~~~~~~~~C~C~~gy~----G~RCe~~   45 (49)
T d1moxc_          13 QFCFHGTCRFLVQEDKPACVCHSGYV----GARCEHA   45 (49)
T ss_dssp             CSSTTEEEEEETTTTEEEEEECTTEE----STTSCEE
T ss_pred             CEeeCCeEEecCCCCCcEeECCCCCE----ecCCccc
Confidence            567777443  344678999999999    9999874

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.77  E-value=0.15  Score=28.90  Aligned_cols=18  Identities=22%  Similarity=0.495  Sum_probs=15.6

Q ss_pred             CCCeeeecCCCccccCCC
Q psy11797         49 IGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        49 ~gsy~C~C~~G~~g~~~~   66 (249)
                      ...+.|+|++||+|..|+
T Consensus        26 ~~~~~C~C~~gy~G~RCe   43 (49)
T d1moxc_          26 EDKPACVCHSGYVGARCE   43 (49)
T ss_dssp             TTEEEEEECTTEESTTSC
T ss_pred             CCCcEeECCCCCEecCCc
Confidence            456899999999998876

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.94  E-value=0.22  Score=26.61  Aligned_cols=32  Identities=34%  Similarity=0.991  Sum_probs=22.7

Q ss_pred             CCccCCCCCCCCCCceecC-CCeeeecCCCccccC
Q psy11797         31 VDECRTPANTCKFSCKNLI-GSYMCTCPPGYQQVT   64 (249)
Q Consensus        31 id~C~~~~~~c~~~C~n~~-gsy~C~C~~G~~g~~   64 (249)
                      +|+|..  ..|...|.... +.|+|.|..||.-..
T Consensus         4 vDPCf~--~~CE~qCqP~~~~~Y~CiCaeGFaP~p   36 (43)
T d1dx5i1           4 VDPCFR--ANCEYQCQPLDQTSYLCVCAEGFAPIP   36 (43)
T ss_dssp             CCGGGG--CCCSSEEEECSSSCEEEECCTTEEEET
T ss_pred             cccccC--CCcceeeeeCCCCcceEEeccccccCC
Confidence            456655  35667787654 579999999997544

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.51  E-value=0.42  Score=24.85  Aligned_cols=26  Identities=15%  Similarity=0.313  Sum_probs=18.8

Q ss_pred             CCCCceec---CCCeeeecCCCccccCCC
Q psy11797         41 CKFSCKNL---IGSYMCTCPPGYQQVTHS   66 (249)
Q Consensus        41 c~~~C~n~---~gsy~C~C~~G~~g~~~~   66 (249)
                      ++++|+..   ..-.+|.||.+|.|..++
T Consensus         6 NGG~Cvsyk~FS~I~rC~CPk~f~G~HCE   34 (40)
T d2i9aa1           6 NGGTCVSNKYFSNIHWCNCPKKFGGQHCE   34 (40)
T ss_dssp             TTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred             cCCEEEEEehhcCCEEecCCcccCceeEE
Confidence            34666653   234689999999998776

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.83  E-value=0.31  Score=26.33  Aligned_cols=30  Identities=33%  Similarity=0.866  Sum_probs=23.0

Q ss_pred             CCCCCCeeee--CCCcceeecCCCceeCCCCCCccc
Q psy11797         98 DSCANGRCVN--LEGSYRCECERGFKLSLDGKQCLG  131 (249)
Q Consensus        98 ~~C~~g~C~~--~~g~~~C~C~~G~~~~~~g~~C~~  131 (249)
                      +-|.||+|.-  ....+.|.|+.||.    |..|+.
T Consensus         8 ~yCihG~C~~i~~l~~~~C~C~~gY~----G~RCq~   39 (41)
T d1xdtr_           8 DFCIHGECKYVKELRAPSCICHPGYH----GERCHG   39 (41)
T ss_dssp             TCCSSEEECCBGGGTBCCEEECTTEE----STTCCE
T ss_pred             CEeECcEEeecCcCCCceeECCCCCe----ecCccc
Confidence            4577788854  34678899999999    888764