Psyllid ID: psy12162

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240--
Protein Sequence
MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAEEIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFRTTLDLVVVPEGK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccHHHHcccccccHHHccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccHHHHHHcccEEEEcccccccEEEEEEcccccccccccHHHHHHHHHHHHcccccccEEEEEEEccccccccccHHHHHHHHHHHcHHHHHcccEEEEEcccHHHHHHHHHHHcccccccccEEEEEccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccHHHHccccccEEEEEEccccccccccccccHHHHHHcccEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHEEEcHHHHHHHHHHHHHHHHHHHHccEEEEEEcccc
Coil and Loop (DISEMBL)
mdtdyqpnfpgirnaiasnndeetpypslsdfhdyepnlefddselqaslngdaeeikvfdtpvpfdylespvsdgtieENFEEElinapmgqldslaatctddelkdeedfadvasygivdvvgddmfgRKLIVLSacklpsnkeldhgrlLGYLTYVLDKFVEQDYSLVYFHygltsknkpslSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKavpvdfrttldlvvvpegk
Flexible Loop (DISEMBL)
mdtdyqpnfpGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAEEIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSacklpsnkeldhgrLLGYLTYVLDKFVEQDYSLVYFHYgltsknkpslsWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVpvdfrttldlvvvpegk
Low Complexity Region (SEG)
MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAEEIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFRTTLDLVVVPEGK
Disordered region (IsUnstruct)
********************************************************IKVFDTPVPFDYLESPV****I***F**ELINAPMGQLDSLAATCTDDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFRTTLDLVVV****
Disordered Region (DISOPRED)
**************************************LEFDDSELQA***********************************************************DEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFRTTLDLVVVP***
Disordered Region (DISEMBL)
MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAEEIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFRTTLDLVVVPEGK
Disordered Region (DISPRO)
**************************PSLSDFHDYEPNLEFDDSELQ********EIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFRTTLDLVVVPE**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAEEIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFRTTLDLVVVPEGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	242	2.2.26 [Sep-21-2011]
Q07960	439	Rho GTPase-activating pro	no	N/A	0.5	0.275	0.595	8e-40
Q5FWK3	439	Rho GTPase-activating pro	yes	N/A	0.5	0.275	0.595	9e-40
Q9CXP4	425	Rho GTPase-activating pro	no	N/A	0.508	0.289	0.560	3e-36
P85298	464	Rho GTPase-activating pro	no	N/A	0.508	0.265	0.480	1e-35
Q9VTU3	476	Rho GTPase-activating pro	yes	N/A	0.838	0.426	0.368	2e-26
Q54TH9	721	Rho GTPase-activating pro	yes	N/A	0.466	0.156	0.429	1e-22
A7T167	502	Protein GDAP2 homolog OS=	N/A	N/A	0.462	0.223	0.398	3e-17
Q292F9	542	Protein GDAP2 homolog OS=	no	N/A	0.462	0.206	0.389	5e-15
Q7JUR6	540	Protein GDAP2 homolog OS=	no	N/A	0.462	0.207	0.389	5e-15
Q12982	314	BCL2/adenovirus E1B 19 kD	no	N/A	0.475	0.366	0.308	3e-12

>sp|Q07960|RHG01_HUMAN Rho GTPase-activating protein 1 OS=Homo sapiens GN=ARHGAP1 PE=1 SV=1

 Score =  163 bits (413), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 97/121 (80%)

Query: 105 ELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFV 164
            LK ++ + D+A + IV+V GDD +GRK+IV SAC++P + +LDH +LLGYL + LD++V
Sbjct: 57  HLKWDDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYV 116

Query: 165 EQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKA 224
           E DY+L+Y H+GLTS NKPSLSWL  AYR FDRKYKKN+KALY+VHPT FI+ +L +FK 
Sbjct: 117 ESDYTLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKP 176

Query: 225 V 225
           +
Sbjct: 177 L 177

GTPase activator for the Rho, Rac and Cdc42 proteins, converting them to the putatively inactive GDP-bound state. Cdc42 seems to be the preferred substrate.
Homo sapiens (taxid: 9606)

>sp|Q5FWK3|RHG01_MOUSE Rho GTPase-activating protein 1 OS=Mus musculus GN=Arhgap1 PE=1 SV=1

 Score =  163 bits (413), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 97/121 (80%)

Query: 105 ELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFV 164
            LK ++ + D+A + IV+V GDD +GRK+IV SAC++P + +LDH +LLGYL + LD++V
Sbjct: 57  HLKWDDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYV 116

Query: 165 EQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKA 224
           E DY+L+Y H+GLTS NKPSLSWL  AYR FDRKYKKN+KALY+VHPT FI+ +L +FK 
Sbjct: 117 ESDYTLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKP 176

Query: 225 V 225
           +
Sbjct: 177 L 177

GTPase activator for the Rho, Rac and Cdc42 proteins, converting them to the putatively inactive GDP-bound state. Cdc42 seems to be the preferred substrate.

Mus musculus (taxid: 10090)

>sp|Q9CXP4|RHG08_MOUSE Rho GTPase-activating protein 8 OS=Mus musculus GN=Arhgap8 PE=2 SV=3

 Score =  152 bits (383), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 69/123 (56%), Positives = 87/123 (70%)

Query: 103 DDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDK 162
           D  L     F DVA +GI+ V GDD  GR++   S C+LP   +L+H RLL YL Y LD+
Sbjct: 5   DPTLSTSHPFYDVARHGILQVAGDDRQGRRIFTFSCCRLPPLHQLNHQRLLEYLKYTLDQ 64

Query: 163 FVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIF 222
            VE DY++VYFHYGL+S+NKPSL WL + Y+ FDRKYKKNLKALY+VHPT  I+ +  IF
Sbjct: 65  HVENDYTIVYFHYGLSSQNKPSLGWLQNTYKEFDRKYKKNLKALYVVHPTSLIKALWNIF 124

Query: 223 KAV 225
           K +
Sbjct: 125 KPL 127

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.

Mus musculus (taxid: 10090)

>sp|P85298|RHG08_HUMAN Rho GTPase-activating protein 8 OS=Homo sapiens GN=ARHGAP8 PE=2 SV=1

 Score =  149 bits (377), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 92/154 (59%), Gaps = 31/154 (20%)

Query: 103 DDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDK 162
           D  L     F DVA +GI+ V GDD FGR+++  S C++P + ELDH RLL YL Y LD+
Sbjct: 5   DPALSTSHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQ 64

Query: 163 FVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRK------------------------ 198
           +VE DY++VYFHYGL S+NKPSL WL SAY+ FDRK                        
Sbjct: 65  YVENDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKDGDLTMWPRLVSNSKLKRSSHLSL 124

Query: 199 -------YKKNLKALYLVHPTGFIRVVLQIFKAV 225
                  YKKNLKALY+VHPT FI+V+  I K +
Sbjct: 125 PKYWDYRYKKNLKALYVVHPTSFIKVLWNILKPL 158

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.

Homo sapiens (taxid: 9606)

>sp|Q9VTU3|RG68F_DROME Rho GTPase-activating protein 68F OS=Drosophila melanogaster GN=RhoGAP68F PE=1 SV=1

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 116/236 (49%), Gaps = 33/236 (13%)

Query: 3   TDYQPNFPG-IRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAEEIKVFD 61
           + + P  PG   N I  N+DE  P PSLSD HD+EP LEFDD+EL A             
Sbjct: 5   SRFAPRLPGPAINPIVDNSDE--PQPSLSDLHDFEPKLEFDDTELLA------------- 49

Query: 62  TPVPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDEEDFADVASYGIV 121
            P P   LE  V  G       E+    P   ++ L     D   +  E+F         
Sbjct: 50  -PSP---LEKDVMVGDFV--LAEDPELEPEEDVNPLEDDFEDQLREQSENFQ--TPRNKC 101

Query: 122 DVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVL---DKFVEQDYSLVYFHYGLT 178
           D +G D  GR +  + A + P   +L+     G++  ++   + FVE DY LVYFH GL 
Sbjct: 102 DFLGTDKQGRHIFGIYASRFPEKSQLE-----GFVREIIKEIEPFVENDYILVYFHQGLK 156

Query: 179 SKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVD-FRTTL 233
             NKPS  +LW++Y+  DR ++KNLK LY+VHPT FIRV+   F     D FR  L
Sbjct: 157 EDNKPSAQFLWNSYKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKL 212

Functions as a GTPase-activating protein (GAP) for RhoA/Rho1 during gastrulation by converting it to an inactive GDP-bound state.

Drosophila melanogaster (taxid: 7227)

>sp|Q54TH9|GACY_DICDI Rho GTPase-activating protein gacY OS=Dictyostelium discoideum GN=gacY PE=3 SV=1

 Score =  106 bits (265), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 1/114 (0%)

Query: 110 EDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYS 169
           + F ++ +   +   G D  GR +IV+ A  LP  +E+D  R+L Y   ++D  VE++Y 
Sbjct: 365 QRFPEIEALNFIYPAGKDNLGRTIIVIIASHLPV-REMDMERVLLYTISIMDPVVEEEYV 423

Query: 170 LVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           LVY H  + + NKPS++W+   Y  F+RKYKKNLK LY+VHPT +I+  L IFK
Sbjct: 424 LVYVHTNMNNSNKPSMAWMKKVYTIFNRKYKKNLKGLYIVHPTTWIKFTLGIFK 477

Rho GTPase-activating protein involved in the signal transduction pathway.

Dictyostelium discoideum (taxid: 44689)

>sp|A7T167|GDAP2_NEMVE Protein GDAP2 homolog OS=Nematostella vectensis GN=gdap2 PE=3 SV=1

 Score = 88.6 bits (218), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 110 EDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYS 169
           E+FAD +   I+   G D  GR ++V  A    + +  D G+ + Y   VLD+ V +DY 
Sbjct: 331 ENFADFSRQKILYQSGVDFLGRPVVVFVARHF-TAQNTDLGKAVAYFISVLDRIVNRDYV 389

Query: 170 LVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIF 222
           +VYFH   T +N+P +S+L   Y   D KY++NLKA Y+VHPT + R+V   F
Sbjct: 390 VVYFHTHSTEENQPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARIVTWFF 442

Nematostella vectensis (taxid: 45351)

>sp|Q292F9|GDAP2_DROPS Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15091 PE=3 SV=1

 Score = 81.6 bits (200), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 110 EDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYS 169
           ED  +V+  G +   G D  GR +IV      P+ + +D  + L YL  +LD  V+ DY 
Sbjct: 375 EDLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPA-QNIDLEKALLYLIKLLDPIVKGDYV 433

Query: 170 LVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIF 222
           + YFH   ++ N PSL WL   Y     KYKKNLKA Y+VHPT + +++   F
Sbjct: 434 ISYFHTLTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWF 486

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|Q7JUR6|GDAP2_DROME Protein GDAP2 homolog OS=Drosophila melanogaster GN=CG18812 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 110 EDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYS 169
           ED  +V+  G +   G D  GR +IV      P+ + +D  + L YL  +LD  V+ DY 
Sbjct: 373 EDLTEVSGIGCLYQSGVDRLGRPVIVFCGKWFPA-QNIDLEKALLYLIKLLDPIVKGDYV 431

Query: 170 LVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIF 222
           + YFH   ++ N PSL WL   Y     KYKKNLKA Y+VHPT + +++   F
Sbjct: 432 ISYFHTLTSTNNYPSLHWLREVYSVLPYKYKKNLKAFYIVHPTFWTKMMTWWF 484

Drosophila melanogaster (taxid: 7227)

>sp|Q12982|BNIP2_HUMAN BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 OS=Homo sapiens GN=BNIP2 PE=1 SV=1

 Score = 72.4 bits (176), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 8/123 (6%)

Query: 105 ELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLL----GYLTYVL 160
           ++K  E +  V S+G     GD +    ++V + C +P + + ++  L+     Y+   L
Sbjct: 143 DMKAIEPYKKVISHG--GYYGDGL--NAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTL 198

Query: 161 DKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQ 220
           +  V ++Y +VY +   T +  PSL WL   Y+  DR+ +KNLK+L +VHP+ FIR +L 
Sbjct: 199 ELLVAENYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLA 258

Query: 221 IFK 223
           + +
Sbjct: 259 VTR 261

Implicated in the suppression of cell death. Interacts with the BCL-2 and adenovirus E1B 19 kDa proteins.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	242
350426817	489	PREDICTED: rho GTPase-activating protein	0.913	0.451	0.633	3e-75
328776121	484	PREDICTED: rho GTPase-activating protein	0.913	0.456	0.643	4e-75
340716925	489	PREDICTED: rho GTPase-activating protein	0.913	0.451	0.633	5e-75
332022384	489	Rho GTPase-activating protein 1 [Acromyr	0.938	0.464	0.623	7e-75
307203701	494	Rho GTPase-activating protein 1 [Harpegn	0.946	0.463	0.600	1e-74
350426819	495	PREDICTED: rho GTPase-activating protein	0.921	0.450	0.610	1e-74
340716927	495	PREDICTED: rho GTPase-activating protein	0.921	0.450	0.610	1e-74
345484453	489	PREDICTED: rho GTPase-activating protein	0.913	0.451	0.629	2e-74
383858303	489	PREDICTED: rho GTPase-activating protein	0.913	0.451	0.633	3e-74
380016803	539	PREDICTED: rho GTPase-activating protein	0.913	0.410	0.641	3e-73

>gi|350426817|ref|XP_003494551.1| PREDICTED: rho GTPase-activating protein 1-like isoform 1 [Bombus impatiens]

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 147/232 (63%), Positives = 171/232 (73%), Gaps = 11/232 (4%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAE----- 55
           M+ DYQP     R   A  ND E PYPSLSD+HDYEPNLEFDD+ELQ + N   +     
Sbjct: 1   MEADYQPTLSPTRTLTAIANDVEDPYPSLSDYHDYEPNLEFDDTELQTTSNNAVQLLEEK 60

Query: 56  -EIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQ-LDSLAATCTDDELKDEEDFA 113
            +I         DYLESPVSDGTIEENFEE L++AP+ +  + LAA   D EL DEED+ 
Sbjct: 61  LDIISSGAGTGIDYLESPVSDGTIEENFEEALVDAPVIESAEDLAAL--DGELADEEDYL 118

Query: 114 DVASYGIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQDYSLV 171
           D++ YGIV+VVGDD  GRK+IV+SACKLP    +  +H +LL YLT+ LD FVEQDYSL+
Sbjct: 119 DISRYGIVEVVGDDSAGRKIIVVSACKLPPVGKEAFNHAKLLRYLTHTLDTFVEQDYSLI 178

Query: 172 YFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           YFHYGLTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR+V QIFK
Sbjct: 179 YFHYGLTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRIVWQIFK 230

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776121|ref|XP_624226.2| PREDICTED: rho GTPase-activating protein 1-like isoform 2 [Apis mellifera]

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 146/227 (64%), Positives = 172/227 (75%), Gaps = 6/227 (2%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAEEIKVF 60
           M+ DYQP     R   A  N+ E PYPSLSD+HDYEPNLEFDD+ELQ + N   EE  + 
Sbjct: 1   MEADYQPTLNPTRTLTAIANEVEDPYPSLSDYHDYEPNLEFDDTELQTTSNNALEEKDLI 60

Query: 61  DTP-VPFDYLESPVSDGTIEENFEEELINAP-MGQLDSLAATCTDDELKDEEDFADVASY 118
           ++     +YLESPVSDGTIEENFEE L++AP +   + LAA   D EL DEED+ D++ Y
Sbjct: 61  NSAGTRLNYLESPVSDGTIEENFEEALVDAPVIKSAEDLAAL--DGELADEEDYLDISRY 118

Query: 119 GIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYG 176
           GIV+VVGDD  GRK+IV+SACKLP    +  ++ +LL YLT+ LD FVEQDYSLVYFHYG
Sbjct: 119 GIVEVVGDDNAGRKVIVVSACKLPPVGKETFNYAKLLRYLTHTLDTFVEQDYSLVYFHYG 178

Query: 177 LTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           LTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR+V QIFK
Sbjct: 179 LTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRIVWQIFK 225

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716925|ref|XP_003396941.1| PREDICTED: rho GTPase-activating protein 1-like isoform 1 [Bombus terrestris]

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 147/232 (63%), Positives = 171/232 (73%), Gaps = 11/232 (4%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAE----- 55
           M+ DYQP     R   A  ND E PYPSLSD+HDYEPNLEFDD+ELQ + N   +     
Sbjct: 1   MEADYQPTLSPTRTLTAIANDVEDPYPSLSDYHDYEPNLEFDDTELQTTSNNAVQLLEEK 60

Query: 56  -EIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQ-LDSLAATCTDDELKDEEDFA 113
            +I         DYLESPVSDGTIEENFEE L++AP+ +  + LAA   D EL DEED+ 
Sbjct: 61  LDIISSGAGTGIDYLESPVSDGTIEENFEEALVDAPVIESAEDLAAL--DGELADEEDYL 118

Query: 114 DVASYGIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQDYSLV 171
           D++ YGIV+VVGDD  GRK+IV+SACKLP    +  +H +LL YLT+ LD FVEQDYSL+
Sbjct: 119 DISRYGIVEVVGDDSAGRKIIVVSACKLPPVGKETFNHAKLLRYLTHTLDTFVEQDYSLI 178

Query: 172 YFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           YFHYGLTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR+V QIFK
Sbjct: 179 YFHYGLTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRIVWQIFK 230

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022384|gb|EGI62696.1| Rho GTPase-activating protein 1 [Acromyrmex echinatior]

 Score =  286 bits (731), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 149/239 (62%), Positives = 175/239 (73%), Gaps = 12/239 (5%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAE----- 55
           M+ DYQP     R      ND E PYPSLSD+HDYEPNLEFDD+ELQ + N  A      
Sbjct: 1   MEADYQPTLSPSRTLTGIGNDCEDPYPSLSDYHDYEPNLEFDDTELQTTSNNAARLLEGK 60

Query: 56  -EIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQ-LDSLAATCTDDELKDEEDFA 113
            ++   +     DY+ESPVSDGTIEENFEE L++AP+ +  D LAA   D EL DEED+ 
Sbjct: 61  LDLVSGNIGAGMDYMESPVSDGTIEENFEEALVDAPVIESADDLAAL--DGELADEEDYL 118

Query: 114 DVASYGIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQDYSLV 171
           D++ +GIV+VVGDD  GRK+IV+SACKLP    +  +H +LL YLT+ LD FVEQDYSLV
Sbjct: 119 DISRHGIVEVVGDDSAGRKIIVVSACKLPPIGKETFNHAKLLRYLTHTLDMFVEQDYSLV 178

Query: 172 YFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK-AVPVDF 229
           YFHYGLTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR+V QIFK A+ V F
Sbjct: 179 YFHYGLTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRIVWQIFKPAISVKF 237

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307203701|gb|EFN82667.1| Rho GTPase-activating protein 1 [Harpegnathos saltator]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 146/243 (60%), Positives = 172/243 (70%), Gaps = 14/243 (5%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNG-------- 52
           M+ DYQP     R  I   ND E PYPSLSD+HDYEPNLEFDD+ELQ + N         
Sbjct: 1   MEADYQPTMSPSRTLIGMTNDCEDPYPSLSDYHDYEPNLEFDDTELQTTSNNGNIFGAVQ 60

Query: 53  ---DAEEIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDE 109
              +  ++         DYLESPVSDGTIEENFEE L++AP+ +  +      D EL DE
Sbjct: 61  LLEEKLDLACSGAGTGIDYLESPVSDGTIEENFEEALVDAPVIESVAEDLAALDGELADE 120

Query: 110 EDFADVASYGIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQD 167
           ED+ D++ +GIV+VVGDD  GRK+IV+SACKLP    +  +H +LL YLT+ LD FVEQD
Sbjct: 121 EDYLDISRHGIVEVVGDDSAGRKIIVVSACKLPPVGKETFNHAKLLRYLTHTLDTFVEQD 180

Query: 168 YSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK-AVP 226
           YSLVYFHYGLTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR+V QIFK A+ 
Sbjct: 181 YSLVYFHYGLTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRIVWQIFKPAIS 240

Query: 227 VDF 229
           V F
Sbjct: 241 VKF 243

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350426819|ref|XP_003494552.1| PREDICTED: rho GTPase-activating protein 1-like isoform 2 [Bombus impatiens]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 144/236 (61%), Positives = 170/236 (72%), Gaps = 13/236 (5%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDA------ 54
           M+ DYQP     R   A  ND E PYPSLSD+HDYEPNLEFDD+ELQ + N         
Sbjct: 1   MEADYQPTLSPTRTLTAIANDVEDPYPSLSDYHDYEPNLEFDDTELQTTSNNGKIFQYKR 60

Query: 55  ---EEIKVFDTP--VPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDE 109
              E++ +  +      DYLESPVSDGTIEENFEE L++AP+ +  +      D EL DE
Sbjct: 61  ILEEKLDIISSGAGTGIDYLESPVSDGTIEENFEEALVDAPVIESVAEDLAALDGELADE 120

Query: 110 EDFADVASYGIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQD 167
           ED+ D++ YGIV+VVGDD  GRK+IV+SACKLP    +  +H +LL YLT+ LD FVEQD
Sbjct: 121 EDYLDISRYGIVEVVGDDSAGRKIIVVSACKLPPVGKEAFNHAKLLRYLTHTLDTFVEQD 180

Query: 168 YSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           YSL+YFHYGLTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR+V QIFK
Sbjct: 181 YSLIYFHYGLTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRIVWQIFK 236

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716927|ref|XP_003396942.1| PREDICTED: rho GTPase-activating protein 1-like isoform 2 [Bombus terrestris]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 144/236 (61%), Positives = 170/236 (72%), Gaps = 13/236 (5%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDA------ 54
           M+ DYQP     R   A  ND E PYPSLSD+HDYEPNLEFDD+ELQ + N         
Sbjct: 1   MEADYQPTLSPTRTLTAIANDVEDPYPSLSDYHDYEPNLEFDDTELQTTSNNGKIFQYKR 60

Query: 55  ---EEIKVFDTP--VPFDYLESPVSDGTIEENFEEELINAPMGQLDSLAATCTDDELKDE 109
              E++ +  +      DYLESPVSDGTIEENFEE L++AP+ +  +      D EL DE
Sbjct: 61  ILEEKLDIISSGAGTGIDYLESPVSDGTIEENFEEALVDAPVIESVAEDLAALDGELADE 120

Query: 110 EDFADVASYGIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQD 167
           ED+ D++ YGIV+VVGDD  GRK+IV+SACKLP    +  +H +LL YLT+ LD FVEQD
Sbjct: 121 EDYLDISRYGIVEVVGDDSAGRKIIVVSACKLPPVGKETFNHAKLLRYLTHTLDTFVEQD 180

Query: 168 YSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           YSL+YFHYGLTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR+V QIFK
Sbjct: 181 YSLIYFHYGLTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRIVWQIFK 236

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345484453|ref|XP_001604462.2| PREDICTED: rho GTPase-activating protein 1-like [Nasonia vitripennis]

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 146/232 (62%), Positives = 173/232 (74%), Gaps = 11/232 (4%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAE----- 55
           M+ DYQP     +   A NN+ E PYPSLSDFHDYEPNLEFDD+ELQA+     +     
Sbjct: 1   MEADYQPALSPAKVLTAVNNESEDPYPSLSDFHDYEPNLEFDDTELQATSTASVQLLEEK 60

Query: 56  -EIKVFDTPVPFDYLESPVSDGTIEENFEEELINAPMGQL-DSLAATCTDDELKDEEDFA 113
            ++ V       +YLESPVSDGTIEENFE+EL++AP+ +  D LAA   D EL DEED+ 
Sbjct: 61  LDLTVGVIGSGIEYLESPVSDGTIEENFEKELVDAPVIETADDLAAL--DTELADEEDYH 118

Query: 114 DVASYGIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQDYSLV 171
           D+A  GIV+VVGDD  GRK+IV+SACKLP    +  +H +LL YLT+ LD FVEQDYSLV
Sbjct: 119 DIARLGIVEVVGDDSAGRKVIVVSACKLPPVGKEAFNHAKLLRYLTHTLDTFVEQDYSLV 178

Query: 172 YFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           YFH+GLTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR+V Q+FK
Sbjct: 179 YFHHGLTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRIVWQLFK 230

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858303|ref|XP_003704641.1| PREDICTED: rho GTPase-activating protein 1-like [Megachile rotundata]

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 147/232 (63%), Positives = 172/232 (74%), Gaps = 11/232 (4%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDA----EE 56
           M+ DYQP     R   A  ND E PYPSLSD+HDYEPNLEFDD+ELQ + N       E+
Sbjct: 1   MEADYQPTLSPTRTLTAIANDVEDPYPSLSDYHDYEPNLEFDDTELQTTSNNAVQLLEEK 60

Query: 57  IKVFDTP--VPFDYLESPVSDGTIEENFEEELINAPMGQ-LDSLAATCTDDELKDEEDFA 113
           + +  +      DYLESPVSDGTIEENFEE L++AP+ +  + LAA   D EL DEED+ 
Sbjct: 61  LDLISSRAGTGIDYLESPVSDGTIEENFEEALVDAPVIESAEDLAAL--DGELADEEDYL 118

Query: 114 DVASYGIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQDYSLV 171
           D+A +GIV+VVGDD  GRK+IV+SACKLP    +  +H +LL YLT+ LD FVEQDYSL+
Sbjct: 119 DIARHGIVEVVGDDSAGRKIIVVSACKLPPVGKETFNHAKLLRYLTHTLDTFVEQDYSLI 178

Query: 172 YFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           YFHYGLTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR V QIFK
Sbjct: 179 YFHYGLTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRFVWQIFK 230

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016803|ref|XP_003692362.1| PREDICTED: rho GTPase-activating protein 1-like [Apis florea]

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 147/229 (64%), Positives = 171/229 (74%), Gaps = 8/229 (3%)

Query: 1   MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAEEIKV- 59
           M+ DYQP     R   A  N+ E PYPSLSD+HDYEPNLEFDD+ELQ + N    E K+ 
Sbjct: 1   MEADYQPTLNPTRTLTAIANEVEDPYPSLSDYHDYEPNLEFDDTELQTTSNVQLLEEKLD 60

Query: 60  --FDTPVPFDYLESPVSDGTIEENFEEELINAPMGQ-LDSLAATCTDDELKDEEDFADVA 116
                    DYLESPVSDGTIEENFEE L++AP+ +  + LAA   D EL DEED+ D++
Sbjct: 61  LNSAAGTGKDYLESPVSDGTIEENFEEALVDAPVIESAEDLAAL--DGELVDEEDYLDIS 118

Query: 117 SYGIVDVVGDDMFGRKLIVLSACKLP--SNKELDHGRLLGYLTYVLDKFVEQDYSLVYFH 174
            YGIV+VVGDD  GRK+IV+SACKLP    +  ++ +LL YLT+ LD FVEQDYSLVYFH
Sbjct: 119 RYGIVEVVGDDNAGRKVIVVSACKLPPVGKETFNYAKLLRYLTHTLDTFVEQDYSLVYFH 178

Query: 175 YGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           YGLTSKNKP LSWLW AY+AFDRKYKKNLKALYLVHPT FIR+V QIFK
Sbjct: 179 YGLTSKNKPPLSWLWQAYKAFDRKYKKNLKALYLVHPTNFIRIVWQIFK 227

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	242
UNIPROTKB|A4GT58	439	ARHGAP1 "Cdc42 GTPase-activati	0.723	0.398	0.476	3.7e-39
UNIPROTKB|A6ZJ79	305	ARHGAP8 "Rho GTPase-activating	0.5	0.396	0.611	1.6e-38
UNIPROTKB|B1AHC3	564	PRR5-ARHGAP8 "Protein PRR5-ARH	0.5	0.214	0.611	1.6e-38
UNIPROTKB|F8W6F3	555	ARHGAP8 "Rho GTPase-activating	0.5	0.218	0.611	1.6e-38
UNIPROTKB|H0Y9T8	504	PRR5-ARHGAP8 "Protein PRR5-ARH	0.5	0.240	0.611	1.6e-38
MGI|MGI:2445003	439	Arhgap1 "Rho GTPase activating	0.706	0.389	0.466	1.6e-38
RGD|1306068	439	Arhgap1 "Rho GTPase activating	0.706	0.389	0.466	1.6e-38
UNIPROTKB|E9PNR6	192	ARHGAP1 "Rho GTPase-activating	0.710	0.895	0.457	2.1e-38
UNIPROTKB|Q07960	439	ARHGAP1 "Rho GTPase-activating	0.710	0.391	0.457	2.1e-38
ZFIN|ZDB-GENE-050417-305	434	arhgap1 "Rho GTPase activating	0.5	0.278	0.606	2.1e-38

UNIPROTKB|A4GT58 ARHGAP1 "Cdc42 GTPase-activating protein" [Canis lupus familiaris (taxid:9615)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 90/189 (47%), Positives = 127/189 (67%)

Query:    44 SELQASLNGDAEEIKVFDTPVPFDYLESPVSDGTIEENF-EEELINAPMGQLDSLAATCT 102
             SELQ  LN D       DT    + L+    D   E+N+  +E+ + P    DS +++  
Sbjct:     5 SELQDDLNLD-------DTSQALNQLKLASID---EKNWPSDEMPDFPKSD-DSKSSSPE 53

Query:   103 D-DELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLD 161
                 LK ++ + D+A + IV+V GDD +GRK+IV SAC++P + +LDH +LLGYL + LD
Sbjct:    54 PVTHLKWDDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLD 113

Query:   162 KFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQI 221
             ++VE DY+L+Y H+GLTS NKPSLSWL  AYR FDRKYKKN+KALY+VHPT FI+ +L +
Sbjct:   114 QYVESDYTLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLIL 173

Query:   222 FKAVPVDFR 230
             FK + + F+
Sbjct:   174 FKPI-ISFK 181

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0030675 "Rac GTPase activator activity" evidence=IEA

GO:0007264 "small GTPase mediated signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

UNIPROTKB|A6ZJ79 ARHGAP8 "Rho GTPase-activating protein 8" [Homo sapiens (taxid:9606)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 74/121 (61%), Positives = 91/121 (75%)

Query:   103 DDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDK 162
             D  L     F DVA +GI+ V GDD FGR+++  S C++P + ELDH RLL YL Y LD+
Sbjct:     5 DPALSTSHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQ 64

Query:   163 FVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIF 222
             +VE DY++VYFHYGL S+NKPSL WL SAY+ FDRKYKKNLKALY+VHPT FI+V+  I 
Sbjct:    65 YVENDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKYKKNLKALYVVHPTSFIKVLWNIL 124

Query:   223 K 223
             K
Sbjct:   125 K 125

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|B1AHC3 PRR5-ARHGAP8 "Protein PRR5-ARHGAP8" [Homo sapiens (taxid:9606)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 74/121 (61%), Positives = 91/121 (75%)

Query:   103 DDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDK 162
             D  L     F DVA +GI+ V GDD FGR+++  S C++P + ELDH RLL YL Y LD+
Sbjct:   136 DPALSTSHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQ 195

Query:   163 FVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIF 222
             +VE DY++VYFHYGL S+NKPSL WL SAY+ FDRKYKKNLKALY+VHPT FI+V+  I 
Sbjct:   196 YVENDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKYKKNLKALYVVHPTSFIKVLWNIL 255

Query:   223 K 223
             K
Sbjct:   256 K 256

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F8W6F3 ARHGAP8 "Rho GTPase-activating protein 8" [Homo sapiens (taxid:9606)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 74/121 (61%), Positives = 91/121 (75%)

Query:   103 DDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDK 162
             D  L     F DVA +GI+ V GDD FGR+++  S C++P + ELDH RLL YL Y LD+
Sbjct:   127 DPALSTSHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQ 186

Query:   163 FVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIF 222
             +VE DY++VYFHYGL S+NKPSL WL SAY+ FDRKYKKNLKALY+VHPT FI+V+  I 
Sbjct:   187 YVENDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKYKKNLKALYVVHPTSFIKVLWNIL 246

Query:   223 K 223
             K
Sbjct:   247 K 247

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|H0Y9T8 PRR5-ARHGAP8 "Protein PRR5-ARHGAP8" [Homo sapiens (taxid:9606)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 74/121 (61%), Positives = 91/121 (75%)

Query:   103 DDELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDK 162
             D  L     F DVA +GI+ V GDD FGR+++  S C++P + ELDH RLL YL Y LD+
Sbjct:    59 DPALSTSHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQ 118

Query:   163 FVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIF 222
             +VE DY++VYFHYGL S+NKPSL WL SAY+ FDRKYKKNLKALY+VHPT FI+V+  I 
Sbjct:   119 YVENDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKYKKNLKALYVVHPTSFIKVLWNIL 178

Query:   223 K 223
             K
Sbjct:   179 K 179

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

MGI|MGI:2445003 Arhgap1 "Rho GTPase activating protein 1" [Mus musculus (taxid:10090)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 83/178 (46%), Positives = 124/178 (69%)

Query:    55 EEIKVFDTPVPFDYLESPVSDGTIEENF-EEELINAPMGQLDSLAATCTD-DELKDEEDF 112
             +++ + DT    + L+    D   E+N+  +E+ + P    DS +++      LK ++ +
Sbjct:     9 DDLTLDDTSQALNQLKLASID---EKNWPSDEMPDFPKSD-DSKSSSPEPVTHLKWDDPY 64

Query:   113 ADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVY 172
              D+A + IV+V GDD +GRK+IV SAC++P + +LDH +LLGYL + LD++VE DY+L+Y
Sbjct:    65 YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLY 124

Query:   173 FHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFR 230
              H+GLTS NKPSLSWL  AYR FDRKYKKN+KALY+VHPT FI+ +L +FK + + F+
Sbjct:   125 LHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPL-ISFK 181

GO:0001726 "ruffle" evidence=IDA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005100 "Rho GTPase activator activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007165 "signal transduction" evidence=IEA

GO:0007264 "small GTPase mediated signal transduction" evidence=ISO

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0030675 "Rac GTPase activator activity" evidence=IDA

GO:0031252 "cell leading edge" evidence=IDA

GO:0043087 "regulation of GTPase activity" evidence=IDA

RGD|1306068 Arhgap1 "Rho GTPase activating protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 83/178 (46%), Positives = 124/178 (69%)

Query:    55 EEIKVFDTPVPFDYLESPVSDGTIEENF-EEELINAPMGQLDSLAATCTD-DELKDEEDF 112
             +++ + DT    + L+    D   E+N+  +E+ + P    DS +++      LK ++ +
Sbjct:     9 DDLTLDDTSQALNQLKLASID---EKNWPSDEMPDFPKSD-DSKSSSPEPVTHLKWDDPY 64

Query:   113 ADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVY 172
              D+A + IV+V GDD +GRK+IV SAC++P + +LDH +LLGYL + LD++VE DY+L+Y
Sbjct:    65 YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLY 124

Query:   173 FHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFR 230
              H+GLTS NKPSLSWL  AYR FDRKYKKN+KALY+VHPT FI+ +L +FK + + F+
Sbjct:   125 LHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPL-ISFK 181

GO:0001726 "ruffle" evidence=IEA;ISO

GO:0005100 "Rho GTPase activator activity" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0007264 "small GTPase mediated signal transduction" evidence=IEA;ISO

GO:0030675 "Rac GTPase activator activity" evidence=IEA;ISO

GO:0031252 "cell leading edge" evidence=ISO

GO:0043087 "regulation of GTPase activity" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA;ISO

UNIPROTKB|E9PNR6 ARHGAP1 "Rho GTPase-activating protein 1" [Homo sapiens (taxid:9606)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 81/177 (45%), Positives = 121/177 (68%)

Query:    55 EEIKVFDTPVPFDYLESPVSDGTIEENF-EEELINAPMGQLDSLAATCTDDELKDEEDFA 113
             +++ + DT    + L+    D   E+N+  +E+ + P       ++      LK ++ + 
Sbjct:     9 DDLTLDDTSEALNQLKLASID---EKNWPSDEMPDFPKSDDSKSSSPELVTHLKWDDPYY 65

Query:   114 DVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYF 173
             D+A + IV+V GDD +GRK+IV SAC++P + +LDH +LLGYL + LD++VE DY+L+Y 
Sbjct:    66 DIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYL 125

Query:   174 HYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFR 230
             H+GLTS NKPSLSWL  AYR FDRKYKKN+KALY+VHPT FI+ +L +FK + + F+
Sbjct:   126 HHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPL-ISFK 181

GO:0001726 "ruffle" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0030675 "Rac GTPase activator activity" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|Q07960 ARHGAP1 "Rho GTPase-activating protein 1" [Homo sapiens (taxid:9606)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 81/177 (45%), Positives = 121/177 (68%)

Query:    55 EEIKVFDTPVPFDYLESPVSDGTIEENF-EEELINAPMGQLDSLAATCTDDELKDEEDFA 113
             +++ + DT    + L+    D   E+N+  +E+ + P       ++      LK ++ + 
Sbjct:     9 DDLTLDDTSEALNQLKLASID---EKNWPSDEMPDFPKSDDSKSSSPELVTHLKWDDPYY 65

Query:   114 DVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYF 173
             D+A + IV+V GDD +GRK+IV SAC++P + +LDH +LLGYL + LD++VE DY+L+Y 
Sbjct:    66 DIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYL 125

Query:   174 HYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVDFR 230
             H+GLTS NKPSLSWL  AYR FDRKYKKN+KALY+VHPT FI+ +L +FK + + F+
Sbjct:   126 HHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPL-ISFK 181

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0030675 "Rac GTPase activator activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005100 "Rho GTPase activator activity" evidence=IDA

GO:0007264 "small GTPase mediated signal transduction" evidence=IDA;TAS

GO:0005070 "SH3/SH2 adaptor activity" evidence=TAS

GO:0007266 "Rho protein signal transduction" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=TAS

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

ZFIN|ZDB-GENE-050417-305 arhgap1 "Rho GTPase activating protein 1" [Danio rerio (taxid:7955)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 74/122 (60%), Positives = 97/122 (79%)

Query:   109 EEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDY 168
             ++ F D+A + IV+V GDD FGRK+IV +AC++P   +LDH +LL YL   LDK+VE DY
Sbjct:    61 DDPFYDIARHQIVEVAGDDNFGRKVIVFNACRMPPQHQLDHHKLLMYLKQTLDKYVESDY 120

Query:   169 SLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAVPVD 228
             +L+YFH+GLTS+NKPSLSWL  AYR FDRKYKKN+KALY+VHPT FIR +L +FK + + 
Sbjct:   121 TLIYFHHGLTSENKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIRTILILFKPI-IS 179

Query:   229 FR 230
             F+
Sbjct:   180 FK 181

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5FWK3	RHG01_MOUSE	No assigned EC number	0.5950	0.5	0.2756	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	242
pfam13716	149	pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain	2e-21
cd00170	157	cd00170, SEC14, Sec14p-like lipid-binding domain	4e-14
smart00516	158	smart00516, SEC14, Domain in homologues of a S	2e-13

>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain

 Score = 86.6 bits (215), Expect = 2e-21
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)

Query: 125 GDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVL-DKFVEQDYSLVYFHYGLTSKNKP 183
           G D  GR ++V  A +LP++   D  RLL YL  +L ++   + + +V  H G+T  NKP
Sbjct: 7   GRDKEGRPVLVFDAKRLPASDLDDLDRLLFYLLSILSEELKPKGFVVVIDHTGVTR-NKP 65

Query: 184 SLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
           S SWL   Y+   R + KNLKA+Y+VHP+ F++  L+   
Sbjct: 66  SWSWLKKLYKLLPRAFPKNLKAVYIVHPSTFLKKFLKTLG 105

This family includes divergent members of the CRAL-TRIO domain family. This family includes ECM25 that contains a divergent CRAL-TRIO domain identified by Gallego and colleagues. Length = 149

>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain

 Score = 67.4 bits (165), Expect = 4e-14
 Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 9/122 (7%)

Query: 109 EEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDY 168
            E+  ++   G +   G D  GR ++++ A     +K LD   LL YL Y L+K +++D 
Sbjct: 1   LEELKELGKVGYLG--GRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDD 58

Query: 169 SLVYFHY------GLTSKNK-PSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQI 221
             V          GL+  +  P  S L    +     Y + LKA+Y+++P  F +V+ +I
Sbjct: 59  EQVEGFVVIIDLKGLSLSHLLPDPSLLKKILKILQDNYPERLKAVYIINPPWFFKVLWKI 118

Query: 222 FK 223
            K
Sbjct: 119 VK 120

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157

>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 8/106 (7%)

Query: 125 GDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQ---DYSLVYFHYGLTSKN 181
           G D  GR +++  A +           LL YL YVL+K +++      +  F      K 
Sbjct: 14  GYDKDGRPVLIERAGRFDLKSV-TLEELLRYLVYVLEKILQEEKKTGGIEGFTVIFDLKG 72

Query: 182 KPSLSWLWSAYRA----FDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
               +   S  R         Y + L  +Y+++P  F RV+ +I K
Sbjct: 73  LSMSNPDLSVLRKILKILQDHYPERLGKVYIINPPWFFRVLWKIIK 118

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	242
KOG4406|consensus	467		100.0
PF13716	149	CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q	99.94
smart00516	158	SEC14 Domain in homologues of a S. cerevisiae phos	99.8
cd00170	157	SEC14 Sec14p-like lipid-binding domain. Found in s	99.78
KOG1470|consensus	324		99.69
PF00650	159	CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T	99.63
KOG1471|consensus	317		98.89
KOG1826|consensus	2724		95.57
PF12496	127	BNIP2: Bcl2-/adenovirus E1B nineteen kDa-interacti	85.61

>KOG4406|consensus

Probab=100.00  E-value=1.1e-34  Score=271.80  Aligned_cols=197  Identities=40%  Similarity=0.592  Sum_probs=169.0

Q ss_pred             CCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCccceeeeCCCCCCccCCCCCCCCCccc
Q psy12162          1 MDTDYQPNFPGIRNAIASNNDEETPYPSLSDFHDYEPNLEFDDSELQASLNGDAEEIKVFDTPVPFDYLESPVSDGTIEE   80 (242)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~   80 (242)
                      ||.-+ |.. |.....+.....++|-++++|+|+.+|.+++++++...++..+-.      +-.                
T Consensus         1 ~~~~~-~~d-p~~~~~~~v~~s~~~~~~~~d~~l~~~d~~~~~~~~l~~sp~~~~------~~~----------------   56 (467)
T KOG4406|consen    1 MDIFF-PVD-PNSGHAPYVFLSDDPSDELGDLDLLIPDLMDRLVMKLPPSPYSLD------IFS----------------   56 (467)
T ss_pred             CCCcC-CCC-CCccccccccccCCcchhhcccccccchhhhhhhhhCCCCcchhh------hhc----------------
Confidence            66666 554 445555566666999999999999999999999998888855222      111                


Q ss_pred             chHHhhccCCCCcccccccccCccccccccChHHHHhc--CCEEEeCC--CCCCCeEEEEEcccCCCCCccchhhHHHHH
Q psy12162         81 NFEEELINAPMGQLDSLAATCTDDELKDEEDFADVASY--GIVDVVGD--DMFGRKLIVLSACKLPSNKELDHGRLLGYL  156 (242)
Q Consensus        81 ~~e~~l~~~~~~~~~~~~~~~~~~~~a~~edf~di~~~--gi~Y~~G~--Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yl  156 (242)
                       .+-+|.+.++                .+.+|.++++|  +++.+.|.  |++||+||||.||++|+.+++|.-+++.|+
T Consensus        57 -~~pel~~~~p----------------~ed~fyd~~~H~~ei~qvi~~~~D~~gr~iivv~a~rlp~~~eld~~~li~~~  119 (467)
T KOG4406|consen   57 -KIPELYGIEP----------------KEDPFYDIARHEREILQVIGDAKDKQGRKIIVVYACRLPSSSELDDIRLISYL  119 (467)
T ss_pred             -cCccccccCc----------------ccccHHHHHHhhhheeeeccCcccccCCeeEEEEEecCCchhhhhhHHHHHHH
Confidence             2233332222                34788899988  88888887  999999999999999999999999999999


Q ss_pred             HHHhhhhcCCCeEEEEEecCCCCCCCCcHHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEE
Q psy12162        157 TYVLDKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDL  235 (242)
Q Consensus       157 l~tLd~~v~~~YvlVyfhtg~s~~n~P~lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~y  235 (242)
                      ++++|++|+++|++||||.|+.+.|+|+++|++++|..++|+|+||||++|||||+||+|++|.+++|| |.||.+||+|
T Consensus       120 v~~id~~Ve~DYt~vYfh~gl~s~nkp~l~~l~~aYke~Dr~~~KNlKalYvvHptwfikvi~n~~kplIS~KF~rKi~Y  199 (467)
T KOG4406|consen  120 VYTIDKYVENDYTLVYFHHGLPSDNKPYLQLLFDAYKELDRNFKKNLKALYVVHPTWFIKVIWNLFKPLISLKFTRKIIY  199 (467)
T ss_pred             HHHHHHHHhccceeeehhcCCcccccchHHHHHHHHHHHHHHHhhhhhheEEecHHHHHHHHHHHHhhhcchhhhceeEE
Confidence            999999999999999999999999999999999999999999999999999999999999999999999 9999999999


Q ss_pred             EeC
Q psy12162        236 VVV  238 (242)
Q Consensus       236 V~~  238 (242)
                      ++-
T Consensus       200 ~n~  202 (467)
T KOG4406|consen  200 FNS  202 (467)
T ss_pred             eeh
Confidence            963

>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A

Probab=99.94  E-value=4.3e-27  Score=192.00  Aligned_cols=120  Identities=37%  Similarity=0.607  Sum_probs=97.8

Q ss_pred             CCEEEeCCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHh-hhhcCCCeEEEEEecCCCCCCCCcHHHHHHHHHHhhH
Q psy12162        119 GIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVL-DKFVEQDYSLVYFHYGLTSKNKPSLSWLWSAYRAFDR  197 (242)
Q Consensus       119 gi~Y~~G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tL-d~~v~~~YvlVyfhtg~s~~n~P~lswLk~~y~~L~r  197 (242)
                      .++|.+|+|++||||+++.+++++.  ..|+++++.|++.+| +.+++++|+|||++++++..+.|+++|++++|+.|++
T Consensus         2 ~~~~~gG~d~~g~pV~~~~~~~~~~--~~~~~~ll~yl~~~l~~~~~~~~f~vVid~~~~~~~~~~~~~~l~~~~~~l~~   79 (149)
T PF13716_consen    2 IFFYPGGRDREGRPVVVFIASRLPS--SDDLERLLLYLLSTLSEEVVDKPFSVVIDHTGFSRSSEPSLSWLKQLYKLLPR   79 (149)
T ss_dssp             SE-EEEEEBTTS-EEEEEEGGG-C---TTHHHHHHHHHHHHH-TTTTTS-EEEEEE-TT--GGG---HHHHHHTTTSS-H
T ss_pred             eEEEecccCCCcCEEEEEECCcCcc--hhhHHHHHHHHHHhhhHHhcCCCEEEEEEcCCCccccCCchHHHHHHHHHHHH
Confidence            4578999999999999999999943  469999999999999 8889999999999999999999999999999999999


Q ss_pred             HHHhccceEEEEcCChHHHHHH-HHhccC-Cccc-cccEEEEeCCC
Q psy12162        198 KYKKNLKALYLVHPTGFIRVVL-QIFKAV-PVDF-RTTLDLVVVPE  240 (242)
Q Consensus       198 ~ykKNLkalYIVHPt~~~K~~~-~ll~pF-S~Kf-~~KI~yV~~~e  240 (242)
                      .+++||+++|||||++|+|.++ .+.+++ +.|+ ++||+|++..+
T Consensus        80 ~~~~nl~~vyiv~p~~~~k~~~~~~~~~~~~~~~~~~kv~~~~sl~  125 (149)
T PF13716_consen   80 KYKKNLKKVYIVHPNWFLKKILATLLRPFVSSKFWKKKVVYVSSLS  125 (149)
T ss_dssp             HHHHTEEEEEEES--HHHHHHHHHTTTTGGGGTT--TTEEEESSTC
T ss_pred             HHhhceEEEEEECCCHHHHHHHHHHhcccccccccceEEEEECCHH
Confidence            9999999999999999999999 677788 9999 99999998764

>smart00516 SEC14 Domain in homologues of a S

Probab=99.80  E-value=4.4e-19  Score=143.84  Aligned_cols=112  Identities=27%  Similarity=0.498  Sum_probs=103.1

Q ss_pred             CCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHhhhhcC--------CCeEEEEEecCCCCCCCCcHHHHHHHHHHhh
Q psy12162        125 GDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVE--------QDYSLVYFHYGLTSKNKPSLSWLWSAYRAFD  196 (242)
Q Consensus       125 G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tLd~~v~--------~~YvlVyfhtg~s~~n~P~lswLk~~y~~L~  196 (242)
                      |.|++||||+++.+++++.. ..+.+.+++|++..+|....        ..+++|++.+|++..+ ++++|++++++.++
T Consensus        14 g~D~~GrpV~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~i~D~~~~~~~~-~~~~~lk~~~~~~~   91 (158)
T smart00516       14 GYDKDGRPVLIFRAGRFDLK-SVTLEELLRYLVYVLEKILQREKKTGGIEGFTVIFDLKGLSMSN-PDLSVLRKILKILQ   91 (158)
T ss_pred             CCCCCcCEEEEEeccccccC-cCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEEEEECCCCCccc-ccHHHHHHHHHHHH
Confidence            79999999999999998754 68999999999999987653        4789999999988766 78999999999999


Q ss_pred             HHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEeC
Q psy12162        197 RKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVVV  238 (242)
Q Consensus       197 r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~~  238 (242)
                      ..|++||+++|||||+++++++|+++++| ++++++||+++++
T Consensus        92 ~~yp~~l~~i~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~  134 (158)
T smart00516       92 DHYPERLGKVLIINPPWFFRVLWKIIKPFLDEKTREKIRFVGN  134 (158)
T ss_pred             HHhHHHhCeEEEECCCHHHHHHHHHHHhhcChhhhccEEEeCC
Confidence            99999999999999999999999999999 9999999999986

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>cd00170 SEC14 Sec14p-like lipid-binding domain

Probab=99.78  E-value=1.3e-18  Score=138.26  Aligned_cols=120  Identities=25%  Similarity=0.416  Sum_probs=104.2

Q ss_pred             CCEEEeCCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHhhhhcC------CCeEEEEEecCCCCCCCC-cHHHHHHH
Q psy12162        119 GIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVE------QDYSLVYFHYGLTSKNKP-SLSWLWSA  191 (242)
Q Consensus       119 gi~Y~~G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tLd~~v~------~~YvlVyfhtg~s~~n~P-~lswLk~~  191 (242)
                      ++.|..|.|++||||+++..++....+..+.+.+++|.+..+|....      ..+++|++.+|++..+.. ..+|++++
T Consensus         9 ~~~~~~~~D~~gr~V~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~~~~k~~   88 (157)
T cd00170           9 KVGYLGGRDKEGRPVLIIRAGNKDLSKSLDSEELLRYLVYTLEKLLQEDDEQVEGFVVIIDLKGLSLSHLLPDPSLLKKI   88 (157)
T ss_pred             cccccCCCCCCcCEEEEEecCCcchhhcCCHHHHHHHHHHHHHHHHhhhhhcccceEEEEECCCCChhccchhHHHHHHH
Confidence            55666667999999999988844333356668899999999987664      378999999999877664 78999999


Q ss_pred             HHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEeC
Q psy12162        192 YRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVVV  238 (242)
Q Consensus       192 y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~~  238 (242)
                      ++.++..|++||+++|||||+++++++|+++++| ++++++||+++++
T Consensus        89 ~~~~~~~yp~~l~~v~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~  136 (157)
T cd00170          89 LKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGS  136 (157)
T ss_pred             HHHHHHhChHhhCeEEEECCCHhHHHHHHHHHHhcCHhhhhhEEEecC
Confidence            9999999999999999999999999999999999 9999999999986

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>KOG1470|consensus

Probab=99.69  E-value=1.5e-16  Score=147.04  Aligned_cols=125  Identities=18%  Similarity=0.282  Sum_probs=113.2

Q ss_pred             hHHHHhcCCEEEeCCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHhhhhc------CCCeEEEEEecCCCCCCCCcH
Q psy12162        112 FADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFV------EQDYSLVYFHYGLTSKNKPSL  185 (242)
Q Consensus       112 f~di~~~gi~Y~~G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tLd~~v------~~~YvlVyfhtg~s~~n~P~l  185 (242)
                      +..-.++|..|.+|.|+.||||+|+.++.=.. +..+.+.+.++++++|+.++      +++++++++.+|+++.| +++
T Consensus        91 v~~e~~tGK~yi~G~D~~gRPVl~~~~~~~~q-n~~t~~~~~r~~Vy~mE~Ai~~lp~~qe~~~~L~D~~~fs~sN-~d~  168 (324)
T KOG1470|consen   91 VAAELETGKAYILGHDKDGRPVLYLRPRPHRQ-NTKTQKELERLLVYTLENAILFLPPGQEQFVWLFDLTGFSMSN-PDI  168 (324)
T ss_pred             HHHHhhcCcEEEecccCCCCeEEEEecCCCCC-CCCCHHHHHHHHHHHHHHHHHhCCCCcceEEEEEecccCcccC-CCc
Confidence            66777899999999999999999998874333 36788999999999999875      36899999999999885 578


Q ss_pred             HHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEeC
Q psy12162        186 SWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVVV  238 (242)
Q Consensus       186 swLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~~  238 (242)
                      +.++-+..+|+.+|+++|..++|+||+|++..+|++++|| .+++..||+|+..
T Consensus       169 ~~~k~~~~~lq~hYPErLg~a~l~~~P~iF~~~wkiikpflDp~t~~Kv~F~~~  222 (324)
T KOG1470|consen  169 KFLKELLHILQDHYPERLGKALLVNAPWIFQPFWKIIKPFLDPKTASKVKFVEP  222 (324)
T ss_pred             HHHHHHHHHHHHhChHHhhhhhhcCChHHHHHHHHHhhhccChhhhceeEEecC
Confidence            9999999999999999999999999999999999999999 9999999999976

>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=99.63  E-value=5.7e-16  Score=125.67  Aligned_cols=125  Identities=17%  Similarity=0.329  Sum_probs=97.0

Q ss_pred             HHHhcCCEEEeCCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHhhhhc--------CCCeEEEEEecCCCCCCCCc-
Q psy12162        114 DVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFV--------EQDYSLVYFHYGLTSKNKPS-  184 (242)
Q Consensus       114 di~~~gi~Y~~G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tLd~~v--------~~~YvlVyfhtg~s~~n~P~-  184 (242)
                      ++.+.++.|..|.|+.||||+++..+++... ....+.++++++..+|...        ...+++|++.+|++..+.+. 
T Consensus         2 ~~~~~~~~~~~g~D~~gr~v~~~~~~~~~~~-~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~iiD~~g~~~~~~~~~   80 (159)
T PF00650_consen    2 EILKSGPFYLHGRDKDGRPVIYIRLGRFDPK-KFSPEDVIRFFVYLLERMLKRMPEGGQVEGIVVIIDLSGFSLSNFDWW   80 (159)
T ss_dssp             HHHTTSCEEEEEE-TTS-EEEEEEGTT--HH-TS-HHHHHHHHHHHHHHHHHTHHHTSHHH-EEEEEE-TT--HHHHHCH
T ss_pred             HHHCCeeEEECCCCCCcCEEEEEEcccCCCC-cCCHHHHHHHHHHHHHHHHhhhcccccceeEEEEEeCCCceEeccccc
Confidence            5778999999999999999999988877653 4556677777777776643        14789999999998766542 


Q ss_pred             -HHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEeCC
Q psy12162        185 -LSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVVVP  239 (242)
Q Consensus       185 -lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~~~  239 (242)
                       .+.++.+.+.++..|+.+|+++||+|++++++++|+++++| ++++.+||+++...
T Consensus        81 ~~~~~k~~~~~~~~~yP~rl~~i~iin~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~  137 (159)
T PF00650_consen   81 PISFLKKIIQLLQDHYPERLGKIYIINAPWFFRVLWKIVKPFLSPKTREKIVFHSGS  137 (159)
T ss_dssp             HHHHHHHHHHHHHHHSTTTEEEEEEES--TTHHHHHHHHGGGS-HHHHCTEEEECTT
T ss_pred             hhhhhhhhhhhhcccCCccceeEEEEecChhhhhhHhHHHhhcCHhhheeEEEECCc
Confidence             88999999999999999999999999999999999999999 99999999999553

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1OLM_E 1O6U_E 3Q8G_A 3B7Q_B 3B7Z_A ....

>KOG1471|consensus

Probab=98.89  E-value=7.6e-09  Score=94.19  Aligned_cols=123  Identities=14%  Similarity=0.177  Sum_probs=90.2

Q ss_pred             hHHHHhcCCEEEeCCCCCCCeEEEEEcccCCCCC---ccchhhHHHHHHHHhhh------------h--cCCCeEEEEEe
Q psy12162        112 FADVASYGIVDVVGDDMFGRKLIVLSACKLPSNK---ELDHGRLLGYLTYVLDK------------F--VEQDYSLVYFH  174 (242)
Q Consensus       112 f~di~~~gi~Y~~G~Dk~GRPVVVi~a~~lP~~~---~~D~e~ll~yll~tLd~------------~--v~~~YvlVyfh  174 (242)
                      ..++.+..-....|+|++|+||++-.....-...   .......++|-+..++.            .  ....++.|++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~g~~v~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~e~~~~~~~~~~~g~~~I~Dl  167 (317)
T KOG1471|consen   88 DDELLKYYPQGLHGVDKEGRPVYIERLGKIDPKGLLKRTGSLDYLKYHFKEFEKVFKLVLELELKTGERQISGIVTIFDL  167 (317)
T ss_pred             chhhhhhccccccccCCCCCEEEEeccCCCCcccceeeccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeEEEEEC
Confidence            3344443334567999999999998555442111   11112222222222211            1  23567889999


Q ss_pred             cCCCCCCC--CcHHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEE
Q psy12162        175 YGLTSKNK--PSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLD  234 (242)
Q Consensus       175 tg~s~~n~--P~lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~  234 (242)
                      .|++..+.  +..+.++++...++.+|+++|+++||||+++++.++|++++|| ++|+.+||+
T Consensus       168 ~G~~~~~~~~~~~~~~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki~  230 (317)
T KOG1471|consen  168 KGVSLSHLLKPAPTLLKKILKILQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKIH  230 (317)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhhe
Confidence            99987766  8899999999999999999999999999999999999999999 999999999

>KOG1826|consensus

Probab=95.57  E-value=0.0038  Score=68.78  Aligned_cols=133  Identities=14%  Similarity=0.066  Sum_probs=108.0

Q ss_pred             ccccccChHHHHhcCCEEEeCCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHhhhhcCCCeEEEEEecCCCCCCCCc
Q psy12162        105 ELKDEEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYGLTSKNKPS  184 (242)
Q Consensus       105 ~~a~~edf~di~~~gi~Y~~G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tLd~~v~~~YvlVyfhtg~s~~n~P~  184 (242)
                      .+.+.|.|.-++...++|+.| .+.|.|+.++++++.--+ +.+-+.|+.++..++.+.+.-++.++.+-+....++.--
T Consensus      1548 ~lheKe~fitL~~~i~~~~~G-sen~~k~~~lvs~r~fl~-~~s~~il~~l~~L~~kp~~hf~~evreD~T~~~~d~sfl 1625 (2724)
T KOG1826|consen 1548 HLHEKEEFITLAKVIQFYANG-SENGLKNFYLVSRRKFLK-ECSDDILIFLVELCLKPKVHFPGEVREDPTPIEFDYSFL 1625 (2724)
T ss_pred             HHhhhhHHHHHHHHHHHHHhh-hhccCcchhhHhHHHHHh-hcCcHHHHHHHHHHcCccccCcceeeecCCcCCccHHHH
Confidence            556779999999999999999 999999999999986553 566667888888889999999999998887766556555


Q ss_pred             HHHHHH-HHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC--CccccccEEEEeCC
Q psy12162        185 LSWLWS-AYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV--PVDFRTTLDLVVVP  239 (242)
Q Consensus       185 lswLk~-~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF--S~Kf~~KI~yV~~~  239 (242)
                      .+++.. ++.+.+.-..+|-.++|+++++.|+|...++.-..  .-|-.++..|.+-|
T Consensus      1626 tsf~~~~~f~vr~~va~e~~~a~~di~~n~~lK~~~~l~driL~~L~~~k~~~f~e~P 1683 (2724)
T KOG1826|consen 1626 TSFLYLKWFKVRPHVANENKHAVGDINCNSFLKETTKLHDRILGQLGQPKMEFFNEIP 1683 (2724)
T ss_pred             HHHHhhhheeechhhhhhcccccccccchHHHHHHHHHHHHHHhhcCCCceeehhcCC
Confidence            555655 77777878899999999999999999998877776  45666777766544

>PF12496 BNIP2: Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2; InterPro: IPR022181 This domain family is found in eukaryotes, and is typically between 119 and 133 amino acids in length

Probab=85.61  E-value=0.61  Score=38.38  Aligned_cols=24  Identities=38%  Similarity=0.536  Sum_probs=18.0

Q ss_pred             CccCCCCCC----CCCcccchHHhhccC
Q psy12162         66 FDYLESPVS----DGTIEENFEEELINA   89 (242)
Q Consensus        66 ~~~~e~~~~----~~~~~~~~e~~l~~~   89 (242)
                      +|.||||++    |...|.+||+.+..+
T Consensus        40 vDdleTp~dsd~ld~~~e~ewedd~p~~   67 (127)
T PF12496_consen   40 VDDLETPSDSDSLDSPHEFEWEDDLPRA   67 (127)
T ss_pred             cccccCCCccccccCCCCcccccccccc
Confidence            477899886    333378899999876

There is a conserved HGGY sequence motif. This family is Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2. It interacts with pro- and anti- apoptotic molecules in the cell.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	242
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	6e-32
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	3e-30

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Length = 256

 Score =  112 bits (281), Expect = 3e-30
 Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 1/115 (0%)

Query: 109 EEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDY 168
           +E+F  + +  I    G    G  +    A +  +  +++   L+ ++   L  +  + Y
Sbjct: 1   KEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTG-QINGDLLIYHVLLTLKPYYAKPY 59

Query: 169 SLVYFHYGLTSKNKPSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFK 223
            +V         N+    +L   +  F      N+ A+Y+ +   ++R   +  +
Sbjct: 60  EIVVDLTHTGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHE 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	242
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	100.0
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	99.96
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	99.66
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	99.64
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	99.6
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	99.56
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	99.54

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*

Probab=100.00  E-value=1.8e-33  Score=250.97  Aligned_cols=131  Identities=15%  Similarity=0.226  Sum_probs=124.0

Q ss_pred             ccChHHHHhcCCEEEeCCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHhhhhcCCCeEEEEEecCCCCCCCCcHHHH
Q psy12162        109 EEDFADVASYGIVDVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVEQDYSLVYFHYGLTSKNKPSLSWL  188 (242)
Q Consensus       109 ~edf~di~~~gi~Y~~G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tLd~~v~~~YvlVyfhtg~s~~n~P~lswL  188 (242)
                      .|||++|++++++|++|.|++||||||++||++|.. .+|+|+|++|++++|+++++++|++||+|||++..|.|+++||
T Consensus         1 ~ed~~~i~~~~ify~~G~d~dGrpViv~~~~~l~~~-~~D~e~Ll~~vl~tl~~~~~~~y~lV~d~T~~~~~n~p~~~wl   79 (256)
T 3pg7_A            1 KEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTG-QINGDLLIYHVLLTLKPYYAKPYEIVVDLTHTGPSNRFKTDFL   79 (256)
T ss_dssp             CTTTTTHHHHTSEEEEEECTTSCEEEEEEGGGCCBT-TBCHHHHHHHHHHHHTTTTTSCEEEEEECTTCCGGGCCCHHHH
T ss_pred             CcchhHHHHcCCEEEcCcCCCCCEEEEEEeecCCCC-CCCHHHHHHHHHHHHHHhcCCCeEEEEECCCCCcccCCcHHHH
Confidence            379999999999999999999999999999999974 7999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhHHHHhccceEEEEcCChHHHHHHHHh-ccC-CccccccEEEEeCCC
Q psy12162        189 WSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIF-KAV-PVDFRTTLDLVVVPE  240 (242)
Q Consensus       189 k~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll-~pF-S~Kf~~KI~yV~~~e  240 (242)
                      +++|+++|++|+|||+++||||||+|+|.+++.+ ++| +.|+++|++||+..+
T Consensus        80 ~~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~sl~  133 (256)
T 3pg7_A           80 SKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPG  133 (256)
T ss_dssp             HHTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEESSTT
T ss_pred             HHHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEECCHH
Confidence            9999999999999999999999999999887765 567 889999999998765

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=99.66  E-value=2.1e-16  Score=137.62  Aligned_cols=126  Identities=8%  Similarity=0.096  Sum_probs=107.9

Q ss_pred             hHHHHhcCCE-EEeCCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHhhhhcC------CCeEEEEEecCCCCCCC--
Q psy12162        112 FADVASYGIV-DVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVE------QDYSLVYFHYGLTSKNK--  182 (242)
Q Consensus       112 f~di~~~gi~-Y~~G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tLd~~v~------~~YvlVyfhtg~s~~n~--  182 (242)
                      +..+.+.|+. +..|.|++||||+++.+.++..+ ..+.+.++++.+..++.++.      ..+++|++.+|++..+.  
T Consensus        76 ~~~~~~~g~~~~l~g~D~~GrpV~i~~~~~~d~~-~~~~~~~~r~~~~~~E~~~~~~~~~~~g~~~I~D~~g~s~~~~~~  154 (262)
T 1r5l_A           76 IIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPK-VFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQ  154 (262)
T ss_dssp             THHHHHTTCEEECSSCCTTCCEEEEEEGGGCCTT-TSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHH
T ss_pred             HHHHHHcCCccCCCCcCCCCCEEEEEeccccCcc-cCCHHHHHHHHHHHHHHHHhChhhcccceEEEEECCCCCHHHHhc
Confidence            3455577864 55699999999999988877654 46777788888888887655      36899999999987764  


Q ss_pred             CcHHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEeC
Q psy12162        183 PSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVVV  238 (242)
Q Consensus       183 P~lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~~  238 (242)
                      +..++++++..+++.+|+++|+++||||++++++++|++++|| ++|+.+||+++..
T Consensus       155 ~~~~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~  211 (262)
T 1r5l_A          155 ITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGN  211 (262)
T ss_dssp             CCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCS
T ss_pred             cCHHHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCC
Confidence            5679999999999999999999999999999999999999999 9999999999853

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*

Probab=99.64  E-value=4.2e-16  Score=141.47  Aligned_cols=126  Identities=14%  Similarity=0.237  Sum_probs=108.9

Q ss_pred             ChHHHHhcCCE-EEeCCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHhhhhcC------CCeEEEEEecCCCCCCC-
Q psy12162        111 DFADVASYGIV-DVVGDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVE------QDYSLVYFHYGLTSKNK-  182 (242)
Q Consensus       111 df~di~~~gi~-Y~~G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tLd~~v~------~~YvlVyfhtg~s~~n~-  182 (242)
                      ++..+.+.|++ +..|.|+.||||+++.+.++..+ ..+.+.++++++..++.++.      ..+++|++.+|++..+. 
T Consensus       134 ~i~~~l~~g~~~~l~g~Dk~GrpVii~r~g~~d~~-~~~~~~~~r~~~~~lE~~l~~~~~~v~g~v~IiD~~g~sl~~~~  212 (316)
T 3hx3_A          134 AVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQ-EITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAA  212 (316)
T ss_dssp             HHHHHHHTTSSEECSSCCTTSCEEEEEECTTCCTT-TSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHH
T ss_pred             HHHHHHHcCCccccCCCCCCCCEEEEEecccCCCC-CCCHHHHHHHHHHHHHHHHhcccCCcceEEEEEECCCCCHHHhc
Confidence            34555677874 45699999999999988777554 57888999999999988775      47999999999987654 


Q ss_pred             -CcHHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEe
Q psy12162        183 -PSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVV  237 (242)
Q Consensus       183 -P~lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~  237 (242)
                       .+.++++++..+++.+|+.+|+++||||++++++++|++++|| ++|+.+||++..
T Consensus       213 ~~~~~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~  269 (316)
T 3hx3_A          213 SLRTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHG  269 (316)
T ss_dssp             HCCHHHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEE
T ss_pred             cCChHHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeC
Confidence             4678999999999999999999999999999999999999999 999999998874

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=99.60  E-value=1.1e-15  Score=136.27  Aligned_cols=125  Identities=13%  Similarity=0.121  Sum_probs=102.4

Q ss_pred             HHHhcCCEEEeCCCCCCCeEEEEEcccCCCCC---ccchhhHHHHHHHHhhhhc--------------CCCeEEEEEecC
Q psy12162        114 DVASYGIVDVVGDDMFGRKLIVLSACKLPSNK---ELDHGRLLGYLTYVLDKFV--------------EQDYSLVYFHYG  176 (242)
Q Consensus       114 di~~~gi~Y~~G~Dk~GRPVVVi~a~~lP~~~---~~D~e~ll~yll~tLd~~v--------------~~~YvlVyfhtg  176 (242)
                      .+.+....|..|+|++||||+++...++..++   ..+.+.++++++..++.++              ...+++|++.+|
T Consensus        99 ~~~~~~~~~~~g~Dk~GrpV~i~~~g~~d~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~g  178 (296)
T 1aua_A           99 LIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKG  178 (296)
T ss_dssp             HHGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTT
T ss_pred             HHHHhCCceecccCCCCCEEEEEeeccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEECCC
Confidence            34444445678999999999999877764321   2467778888888776432              246899999999


Q ss_pred             CCCCCCCc-HHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEeC
Q psy12162        177 LTSKNKPS-LSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVVV  238 (242)
Q Consensus       177 ~s~~n~P~-lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~~  238 (242)
                      ++..+.+. .++++++..+++.+|+++|+++||||++++++++|++++|| ++|+.+||+++..
T Consensus       179 ~s~~~~~~~~~~~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~  242 (296)
T 1aua_A          179 ISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGS  242 (296)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCc
Confidence            98777654 68899999999999999999999999999999999999999 9999999999864

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=99.56  E-value=4.3e-15  Score=138.06  Aligned_cols=117  Identities=18%  Similarity=0.241  Sum_probs=101.2

Q ss_pred             EEeCCCCCCCeEEEEEcccCCCCC---ccchhhHHHHHHHHhhhhcC-------------CCeEEEEEecCCCCCCC--C
Q psy12162        122 DVVGDDMFGRKLIVLSACKLPSNK---ELDHGRLLGYLTYVLDKFVE-------------QDYSLVYFHYGLTSKNK--P  183 (242)
Q Consensus       122 Y~~G~Dk~GRPVVVi~a~~lP~~~---~~D~e~ll~yll~tLd~~v~-------------~~YvlVyfhtg~s~~n~--P  183 (242)
                      +..|.|++||||+++...++..++   ..+.+.+++|++..+|.++.             ..+++|++..|++..+.  |
T Consensus        87 ~~~g~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~r~~~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~sl~~~~~~  166 (403)
T 1olm_A           87 GMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKP  166 (403)
T ss_dssp             EEEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHH
T ss_pred             eeeccCCCcCEEEEEecCCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhhHHhhCCcccceEEEEECCCCCHHHHhhH
Confidence            357999999999999888765421   25678899999888876532             57899999999987765  5


Q ss_pred             cHHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEeC
Q psy12162        184 SLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVVV  238 (242)
Q Consensus       184 ~lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~~  238 (242)
                      ..++++++.++++.+|+++|+++||||++++++++|++++|| ++++.+||+++..
T Consensus       167 ~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~  222 (403)
T 1olm_A          167 AVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA  222 (403)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT
T ss_pred             HHHHHHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEECh
Confidence            688999999999999999999999999999999999999999 9999999999854

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=99.54  E-value=5.4e-15  Score=134.75  Aligned_cols=125  Identities=14%  Similarity=0.093  Sum_probs=103.1

Q ss_pred             HHHhcCCEEEeCCCCCCCeEEEEEcccCCCCC---ccchhhHHHHHHHHhhhhc--------------CCCeEEEEEecC
Q psy12162        114 DVASYGIVDVVGDDMFGRKLIVLSACKLPSNK---ELDHGRLLGYLTYVLDKFV--------------EQDYSLVYFHYG  176 (242)
Q Consensus       114 di~~~gi~Y~~G~Dk~GRPVVVi~a~~lP~~~---~~D~e~ll~yll~tLd~~v--------------~~~YvlVyfhtg  176 (242)
                      .+.+.+..|..|+|++||||+++...++..++   ..+.++++++++..++.++              -+..++|++..|
T Consensus       114 ~~~~~~~~~~~g~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~IiD~~g  193 (320)
T 3q8g_A          114 KLAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKG  193 (320)
T ss_dssp             HHHTTSCEEEEEECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTT
T ss_pred             HHHHhCCceecCCCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEEEECCC
Confidence            45566778889999999999999887765321   1255677888877766542              145789999999


Q ss_pred             CCCCCCCc-HHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEeC
Q psy12162        177 LTSKNKPS-LSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVVV  238 (242)
Q Consensus       177 ~s~~n~P~-lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~~  238 (242)
                      ++..+.+. .++++++..+++.+|+++|+++||||++++++++|++++|| ++|+.+||+++..
T Consensus       194 ~sl~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~  257 (320)
T 3q8g_A          194 ISLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGS  257 (320)
T ss_dssp             CCHHHHHHTHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCC
Confidence            98777643 68899999999999999999999999999999999999999 9999999999854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	242
d1r5la2	185	Alpha-tocopherol transfer protein {Human (Homo sap	99.63
d1olma3	199	Supernatant protein factor (SPF), middle domain {H	99.62
d1auaa2	203	C-terminal domain of phosphatidylinositol transfer	99.61

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=4.6e-16  Score=128.05  Aligned_cols=123  Identities=9%  Similarity=0.127  Sum_probs=106.1

Q ss_pred             HHHhcCCEEEe-CCCCCCCeEEEEEcccCCCCCccchhhHHHHHHHHhhhhcC------CCeEEEEEecCCCCCCC--Cc
Q psy12162        114 DVASYGIVDVV-GDDMFGRKLIVLSACKLPSNKELDHGRLLGYLTYVLDKFVE------QDYSLVYFHYGLTSKNK--PS  184 (242)
Q Consensus       114 di~~~gi~Y~~-G~Dk~GRPVVVi~a~~lP~~~~~D~e~ll~yll~tLd~~v~------~~YvlVyfhtg~s~~n~--P~  184 (242)
                      ++.+.|++... |+|+.||||+++.++++.++ ..+.+.++++++..++....      +.+++|++.+|++.++.  ++
T Consensus         4 ~~l~~g~~~~lp~rD~~Gr~v~~~r~~~~d~~-~~~~~~~~r~~~~~~e~~~~~~~~~~~g~~~I~D~~g~s~~~~~~~~   82 (185)
T d1r5la2           4 GLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPK-VFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQIT   82 (185)
T ss_dssp             HHHHTTCEEECSSCCTTCCEEEEEEGGGCCTT-TSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHHCC
T ss_pred             HHHHcCCceecCCCCcCcCEEEEEEcccCCCC-CCCHHHHHHHHHHHHHHHHhccccCCceEEEEEECCCCCHHHhhhcc
Confidence            45678887654 89999999999998887553 46777788888888776554      46899999999987663  78


Q ss_pred             HHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEe
Q psy12162        185 LSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVV  237 (242)
Q Consensus       185 lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~  237 (242)
                      .+.++++.+.++.+|+.+|+++||||++++++++|++++|| ++|+.+||++..
T Consensus        83 ~~~~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~vk~fl~~k~~~Ki~~~~  136 (185)
T d1r5la2          83 PSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHG  136 (185)
T ss_dssp             HHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECC
T ss_pred             HHHHHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHHHHhccHHHHhheEEec
Confidence            99999999999999999999999999999999999999999 999999999874

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.7e-16  Score=130.58  Aligned_cols=115  Identities=18%  Similarity=0.245  Sum_probs=96.9

Q ss_pred             EeCCCCCCCeEEEEEcccCCCCC---ccchhhHHHHHHHHhhhhcC-------------CCeEEEEEecCCCCCCC--Cc
Q psy12162        123 VVGDDMFGRKLIVLSACKLPSNK---ELDHGRLLGYLTYVLDKFVE-------------QDYSLVYFHYGLTSKNK--PS  184 (242)
Q Consensus       123 ~~G~Dk~GRPVVVi~a~~lP~~~---~~D~e~ll~yll~tLd~~v~-------------~~YvlVyfhtg~s~~n~--P~  184 (242)
                      .+|.|++||||+++...++..++   ....+.++++.+..++....             +.+++|++.+|++..+.  +.
T Consensus        13 ~~G~Dk~Grpv~~~r~g~~d~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~v~~~~~I~Dl~g~s~~~~~~~~   92 (199)
T d1olma3          13 MCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPA   92 (199)
T ss_dssp             EEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHHH
T ss_pred             cccCCCCCCEEEEEecccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccceEEEEEECCCCchhhhcccc
Confidence            46999999999999877764321   23556778888877765432             46899999999877655  46


Q ss_pred             HHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEe
Q psy12162        185 LSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVV  237 (242)
Q Consensus       185 lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~  237 (242)
                      +++++++.++++.+|+++|+++||||++++++++|++++|| ++++.+||+++.
T Consensus        93 ~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~  146 (199)
T d1olma3          93 VEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLG  146 (199)
T ss_dssp             HHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECC
T ss_pred             HHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeC
Confidence            79999999999999999999999999999999999999999 999999999985

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.61  E-value=2.6e-16  Score=131.18  Aligned_cols=118  Identities=12%  Similarity=0.139  Sum_probs=98.5

Q ss_pred             EEEeCCCCCCCeEEEEEcccCCCCC---ccchhhHHHHHHHHhhhhcC--------------CCeEEEEEecCCCCCCC-
Q psy12162        121 VDVVGDDMFGRKLIVLSACKLPSNK---ELDHGRLLGYLTYVLDKFVE--------------QDYSLVYFHYGLTSKNK-  182 (242)
Q Consensus       121 ~Y~~G~Dk~GRPVVVi~a~~lP~~~---~~D~e~ll~yll~tLd~~v~--------------~~YvlVyfhtg~s~~n~-  182 (242)
                      .|.+|+|++||||+++...++....   ..+.+.++++.+..++.++.              +.+++|++.+|++..+. 
T Consensus        13 ~~~~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g~s~~~~~   92 (203)
T d1auaa2          13 QYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAY   92 (203)
T ss_dssp             CEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHHHHH
T ss_pred             CcCCCCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCCCChHHhh
Confidence            4678999999999999877665321   23667788888888775431              46899999999876555 


Q ss_pred             CcHHHHHHHHHHhhHHHHhccceEEEEcCChHHHHHHHHhccC-CccccccEEEEeC
Q psy12162        183 PSLSWLWSAYRAFDRKYKKNLKALYLVHPTGFIRVVLQIFKAV-PVDFRTTLDLVVV  238 (242)
Q Consensus       183 P~lswLk~~y~~L~r~ykKNLkalYIVHPt~~~K~~~~ll~pF-S~Kf~~KI~yV~~  238 (242)
                      +.+..++++.++++.+|+++|+++||||++++++++|+++++| +.++.+||+++..
T Consensus        93 ~~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~  149 (203)
T d1auaa2          93 SVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGS  149 (203)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCS
T ss_pred             hHHHHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCC
Confidence            2357889999999999999999999999999999999999999 9999999999864