Psyllid ID: psy12165

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------
Protein Sequence
MVHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHVEEEHPTMQRRYSCQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDKSQTLLHKCIWTRHIRATLLRK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccHHHHHHccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccHHHHHcccccccHHHcccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccHHHcccccccccccccccccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccEEcccccccccccccccEccccHHHHHcccEcccccccEEccccccccccccEccccHHHHHHHcHccccccccccccccccEEEEEEcccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccEEcccccccccccccccEccccHHHHHHHHccccccccccccccccccccEccccccEEccccHHHHHHHccccccccccccccEEEcccccHHHEEEEEccccccEEEEcccccccEcccccHHHHHHHcccccccccccccccccccEccccHHHHHHHHHHccccccccccccccEccccHHHHHHHHHHcccccccccccccccEEcccccHHHHHHHcccccccccccccEEccccHHHHHHHHcccccccccEccccccccccccccccEcccccHHHHHHHEcccccccccccccccEcccHHHHHHHHHHcccccccccccccccccccEEEcccHHHHHHHHcccccccEEcccccHHHHHHHHccccc
Coil and Loop (DISEMBL)
MVHGHKEEAALSCGNCLKVFRDNLSLLKhveeehptmqrrYSCQVHIILVLNTLLDDNLSLLkhveeehptmqrrySCQVDTMEAIKEHRKTEHAMYvcdlcpkyysrsthlwkhvnrvhkghpdvtcricskvsssrghlekhliahdnpntevdepqmnefgesvhICHLCQKQFKQNWLLQKhkktckgpkrptsplpepdedgifrcKKCVkvfvnpdiykkhlkhshtkaycevcitapgyETKVELLHHMKtehkdneeykclipgckkyFRTKLDCQkhcrehktvtsrcptnycnFCADLFTNRKKLWLHLKSTHkdltncmcsacfvVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHlvncrvcgsifhsepelkvhleehtdvpetkeqkprpelpvtcdlcskewpsrkFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLdqahpgyfaeevdnptcevcgryhnarpkLESHLAVHVgldksqtllHKCIWTRHIRATLLRK
Flexible Loop (DISEMBL)
mvhghkeeaalscgNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHveeehptmqrrysCQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVnrvhkghpdvTCRICSKVSSSRGHLEKhliahdnpnteVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKktckgpkrptsplpepdedgiFRCKKCVKVFVNPDIYKkhlkhshtkaYCEVCITAPGYETKVELLHHMKtehkdneeykcLIPGCKKYFRTKLDCQKHCREhktvtsrcptnYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTdvpetkeqkprpelpvtCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDksqtllhkciwTRHIRATLLRK
Low Complexity Region (SEG)
MVHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIIlvlntllddnlsllKHVEEEHPTMQRRYSCQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEahvaakhkaiikkPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDKSQTLLHKCIWTRHIRATLLRK
Disordered region (IsUnstruct)
*********ALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHVEE****MQRRYSCQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKV****************************FGESVHICHLCQKQFKQNWLLQK*********************GIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEP************************PVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDKSQTLLHKCIWTRHIRATL***
Disordered Region (DISOPRED)
MVHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHVEEEHPTMQRRYSCQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDKSQTLLHKCIWT***R******
Disordered Region (DISEMBL)
*********ALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHVEEEHPTMQRRYSCQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLE****************LPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDKSQTLLHKCIWTRHIRATLLRK
Disordered Region (DISPRO)
MVHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHVEEEHPTMQRRYSCQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDKSQTLLHKCIWTR*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHVEEEHPTMQRRYSCQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDKSQTLLHKCIWTRHIRATLLRK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	537	2.2.26 [Sep-21-2011]
P10076	861	Zinc finger protein 26 OS	yes	N/A	0.877	0.547	0.243	2e-24
Q5R5U3	672	Zinc finger protein 271 O	yes	N/A	0.817	0.653	0.261	2e-21
Q6ZNA1	936	Zinc finger protein 836 O	yes	N/A	0.735	0.422	0.253	2e-21
P18751	898	Oocyte zinc finger protei	N/A	N/A	0.661	0.395	0.263	7e-21
Q14591	655	Zinc finger protein 271 O	no	N/A	0.815	0.668	0.259	3e-20
P17035	718	Zinc finger protein 28 OS	no	N/A	0.815	0.610	0.264	2e-19
Q9HCG1	818	Zinc finger protein 160 O	no	N/A	0.821	0.539	0.254	4e-19
Q7TSH9	737	Zinc finger protein 184 O	no	N/A	0.819	0.597	0.254	5e-19
Q3MIS6	628	Zinc finger protein 528 O	no	N/A	0.683	0.584	0.264	2e-18
A6QLU5	752	Zinc finger protein 184 O	no	N/A	0.756	0.539	0.257	2e-18

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  114 bits (284), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 144/591 (24%), Positives = 215/591 (36%), Gaps = 120/591 (20%)

Query: 2   VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSL 61
           +  H  E    C  C K F +  SL+ H+ +   T ++ Y C+        T +  +  L
Sbjct: 265 MQSHTVEKPYDCKECGKAFTERSSLIVHLRQH--TREKSYECKE----CGKTFIQPS-RL 317

Query: 62  LKHVEEEHPTMQRRYSCQ-----VDTMEAIKEHRKTEHAM--YVCDLCPKYYSRSTHLWK 114
            +H+     T ++ Y C        +   +  H +T      + C++C K ++RS++L  
Sbjct: 318 TEHMRSH--TGEKPYQCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLG 375

Query: 115 HVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQ 174
           H+ R H G     C++C K  S R  L  HL  H               GE  + C  C+
Sbjct: 376 HI-RTHTGEKPYECKVCGKAFSGRSWLTIHLRKHT--------------GERPYPCTECE 420

Query: 175 KQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLK-HSHT 233
           K F     L +H KT  G K              FRCK C + F N    K H + H+  
Sbjct: 421 KAFTSFAQLTEHIKTHTGEK-------------PFRCKVCARTFRNSSCLKTHFRIHTGI 467

Query: 234 KAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREH-- 290
           K Y C  C  A  +  +  L  H+   H   + Y+C    C K F T     +H R H  
Sbjct: 468 KPYKCNYCGKA--FTARSGLTKHVLI-HNGEKPYEC--KECGKAFSTSSGLVEHIRIHTG 522

Query: 291 -----------------------KTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLT 327
                                  +T T   P   CN C   FT    L +H++ TH    
Sbjct: 523 EKPFECYQCGKALAHSSSLVGHLRTHTGEKPFE-CNQCDKTFTRSSYLRIHMR-THTGEK 580

Query: 328 NCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHG-EHL 386
              C  C       S L  H+        ++PY C+ C +   +  +++ HIK H  E  
Sbjct: 581 PYECKECGKTFPERSCLTKHIRTH---TGERPYECKECGKGFISFAQLTVHIKTHSSERP 637

Query: 387 VNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLI 446
             C+VC   F +   L+ H   HT V            P  C  C K + +R  +  HL 
Sbjct: 638 FQCKVCTKSFRNSSSLETHFRIHTGVK-----------PYKCSYCGKAFTARSGLTIHL- 685

Query: 447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDN------------------ 488
           R+H      AC  C K   T   L  H+ ++H G    E D+                  
Sbjct: 686 RNHTGEKSYACQECGKAFSTSSGLIAHI-RSHKGEKPFECDHCGKAFASSSYLNVHLKIH 744

Query: 489 -----PTCEVCGRYHNARPKLESHLAVHVGLDKSQTLL--HKCIWTRHIRA 532
                  C VCG+       L  H+  H G    Q ++     +W+ ++R 
Sbjct: 745 TGEKPFQCTVCGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRV 795

May be involved in transcriptional regulation.
Mus musculus (taxid: 10090)

>sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 OS=Pongo abelii GN=ZNF271 PE=2 SV=1

 Score =  104 bits (259), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 200/521 (38%), Gaps = 82/521 (15%)

Query: 5   HKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKH 64
           H  E   SC  C+K F  +  L+KH  +   T ++ Y C              +  L+ H
Sbjct: 129 HTGEKPYSCNWCIKSFSRSSDLIKH--QRVHTGEKPYKCDE-----CGKAFSQSSDLIIH 181

Query: 65  VEEEHPTMQRRYSCQ------VDTMEAIKEHR-KTEHAMYVCDLCPKYYSRSTHLWKHVN 117
             +   T ++ Y C           + +K  R  T    Y C+ C K++S+S+ + KH  
Sbjct: 182 --QRIHTGEKPYQCSHCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVIKH-Q 238

Query: 118 RVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQF 177
           R+H G     C +C+K  S    L  H   H               GE  + C+ C K F
Sbjct: 239 RIHTGEKPYKCDVCAKAFSQSSDLILHQRIHT--------------GEKPYPCNQCSKSF 284

Query: 178 KQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLK-HSHTKAY 236
            QN  L KH++   G K              ++C +C K F    +   H + H+  K Y
Sbjct: 285 SQNSDLIKHRRIHTGEK-------------PYKCNECGKAFNQSSVLILHQRIHTGEKPY 331

Query: 237 -CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTS 295
            C+ C  +  +    +L++H +  H   + Y C    C K F  + D  KH   H+  T 
Sbjct: 332 PCDQC--SKTFSRLSDLINHQRI-HTGEKPYPC--NQCNKMFSRRSDLVKH---HRIHTG 383

Query: 296 RCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAI 355
             P   C+ C   F+    L LH +  H       CS C       S L      KH+ I
Sbjct: 384 EKPYE-CDECGKTFSQSSNLILHQR-IHTGEKPYPCSDCTKSFSRRSDL-----VKHQRI 436

Query: 356 --IKKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDV 412
              +KPYAC  C +       +++H ++H GE   +C  C   F    +L +H   HT  
Sbjct: 437 HTGEKPYACNQCDKSFSQSSDLTKHQRVHSGEKPYHCNSCEKAFSQSSDLILHQRIHTG- 495

Query: 413 PETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALAL 472
                     E P  C  CSK +     + +H  R H       C  C K      AL L
Sbjct: 496 ----------EKPYLCTQCSKSFSQNSDLIKHQ-RIHTGEKPYKCSECRKAFSQCSALTL 544

Query: 473 HLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVG 513
           H  + H G    E  NP C  CG+  +    L +H  +H G
Sbjct: 545 H-QRIHTG----EKPNP-CNECGKSFSRHSDLINHQKIHTG 579

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q6ZNA1|ZN836_HUMAN Zinc finger protein 836 OS=Homo sapiens GN=ZNF836 PE=2 SV=2

 Score =  104 bits (259), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 177/466 (37%), Gaps = 71/466 (15%)

Query: 5   HKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKH 64
           H       CG C K+FR N  L+ H      T ++ Y C         +    NL++ + 
Sbjct: 268 HTRGKPYQCGVCGKIFRQNSDLVNHRRSH--TGEKPYKCNECGKSFSQSY---NLAIHQR 322

Query: 65  VEEEHPTMQRRYSCQ-----VDTMEAIKEHR--KTEHAMYVCDLCPKYYSRSTHLWKHVN 117
           +     T ++ Y C            +  H+   T    Y CD+C K + ++++L  H  
Sbjct: 323 IH----TGEKPYKCNECGKTFKQGSCLTTHQIIHTGEKPYQCDICGKVFRQNSNLVNH-Q 377

Query: 118 RVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNP--------------NTEVDEPQMNEF 163
           R+H G     C IC K  S   +L  H   H                 ++ +   Q+   
Sbjct: 378 RIHTGEKPYKCNICGKSFSQSSNLATHQTVHSGNKPYKCDECGKTFKRSSSLTTHQIIHT 437

Query: 164 GESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDI 223
           GE  + C +C K F Q   L +H+++  G K              ++C +C KVF     
Sbjct: 438 GEKPYTCDVCDKVFSQRSQLARHQRSHTGEK-------------PYKCNECGKVFSQTSH 484

Query: 224 YKKHLK-HSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKL 281
              H + H+  K Y C+ C  A     +  LL   K  H   + Y+C    C K F    
Sbjct: 485 LVGHRRIHTGEKPYKCDKCGKAF---KQGSLLTRHKIIHTREKRYQC--GECGKVFSENS 539

Query: 282 DCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNL 341
              +H R H   T   P   CN C  +F     L +H K  H       C+ C  V  N 
Sbjct: 540 CLVRHLRIH---TGEQPYK-CNVCGKVFNYSGNLSIH-KRIHTGEKPFQCNECGTVFRNY 594

Query: 342 SALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEP 400
           S L  H+        +KPY C +C ++  +   +S H ++H GE    C  CG +F    
Sbjct: 595 SCLARHLRIH---TGQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVFSYYS 651

Query: 401 ELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLI 446
            L  H + HT            E P  C+ C K +  R  + +HLI
Sbjct: 652 CLARHRKIHTG-----------EKPYKCNDCGKAYTQRSSLTKHLI 686

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P18751|ZO71_XENLA Oocyte zinc finger protein XlCOF7.1 (Fragment) OS=Xenopus laevis PE=2 SV=1

 Score =  102 bits (254), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 162/421 (38%), Gaps = 66/421 (15%)

Query: 97  YVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVD 156
           + C  C K +S S+ L  H  R H      +C  C K  S+R HL +H + H        
Sbjct: 538 FCCSECGKCFSSSSGLTAHQQRTHMKVKPFSCSACGKCFSNRSHLIRHQMIHT------- 590

Query: 157 EPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVK 216
                  GE    C  C+K F     L +H+ T  G K              F C +C K
Sbjct: 591 -------GEKPFSCFECRKCFSNPSNLARHQMTHTGEK-------------PFSCSECGK 630

Query: 217 VFV-NPDIYKKHLKHSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCK 274
            F  + D+   H  H+  K + C  C     Y  K  L+HH +T H   + + C    C 
Sbjct: 631 CFASSSDLTFHHRTHTGEKPFSCSEC--GKCYSKKSSLVHHQRT-HTGEKPFSC--SKCD 685

Query: 275 KYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLH--LKSTHKDLTNCMCS 332
           K F +  +   H R H    +      C+ C   FTNR +L  H  + +  K ++   C 
Sbjct: 686 KCFASSSELNIHQRTHTGEKAF----SCSECGKCFTNRSQLSRHQMIHTGEKPISCPECE 741

Query: 333 ACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRV 391
            CFV   + S L AH    H+ +  KP++C  C +   N    + H  +H GE   +C  
Sbjct: 742 ECFV---SSSQLTAHQQQAHRMV--KPFSCLECGKCFSNRSNFARHQMIHTGEKPFSCSE 796

Query: 392 CGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKA 451
           C   F ++  L  H   HT            E P +C  C K + ++  + +H +  H  
Sbjct: 797 CRKGFSNQSSLARHQMTHTG-----------EKPFSCSECGKRFSNQSHLARHQM-IHTG 844

Query: 452 VAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNP-TCEVCGRYHNARPKLESHLAV 510
               +C  C K       LA H    H G      + P  C  CG+   +  KL +H   
Sbjct: 845 EKPFSCSECAKGFSNQSGLARH-QMTHTG------EKPFACSECGKCFASSSKLTAHQRT 897

Query: 511 H 511
           H
Sbjct: 898 H 898

May be involved in transcriptional regulation.

Xenopus laevis (taxid: 8355)

>sp|Q14591|ZN271_HUMAN Zinc finger protein 271 OS=Homo sapiens GN=ZNF271 PE=2 SV=4

 Score =  100 bits (249), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 198/516 (38%), Gaps = 78/516 (15%)

Query: 8   EAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHVE- 66
           E   SC  C+K F  +  L+KH  +   T ++ Y C              +  L+ H   
Sbjct: 115 EKPYSCNWCIKSFSWSSDLIKH--QRVHTGEKPYKCD-----ECGKAFSQSSDLIIHQRI 167

Query: 67  --EEHPTMQRRYSCQVDTMEAIKEHRK--TEHAMYVCDLCPKYYSRSTHLWKHVNRVHKG 122
              E P   R  S        + +H++  T    Y C+ C K++S+S+ + KH  R+H G
Sbjct: 168 HIGEKPYQCRHCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVIKH-QRIHTG 226

Query: 123 HPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWL 182
                C +C K  S    L  H   H               GE  + C+ C K F QN  
Sbjct: 227 EKPYKCDVCGKAFSQSSDLILHQRIHT--------------GEKPYPCNQCSKSFSQNSD 272

Query: 183 LQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLK-HSHTKAY-CEVC 240
           L KH++   G K              ++C +C K F    +   H + H+  K Y C+ C
Sbjct: 273 LIKHRRIHTGEK-------------PYKCNECGKAFNQSSVLILHQRIHTGEKPYPCDQC 319

Query: 241 ITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTN 300
             +  +    +L++H +  H   + Y C    C K F  + D  KH   H+  T   P  
Sbjct: 320 --SKTFSRLSDLINHQRI-HTGEKPYPC--NQCNKMFSRRSDLVKH---HRIHTGEKPYE 371

Query: 301 YCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAI--IKK 358
            C+ C   F+    L LH +  H       CS C       S L      KH+ I   +K
Sbjct: 372 -CDECGKTFSQSSNLILHQR-IHTGEKPYACSDCTKSFSRRSDL-----VKHQRIHTGEK 424

Query: 359 PYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKE 417
           PYAC  C +       +++H ++H GE   +C  C   F    +L +H   HT       
Sbjct: 425 PYACNQCDKSFSQSSDLTKHQRVHSGEKPYHCNSCEKAFSQSSDLILHQRIHTG------ 478

Query: 418 QKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQA 477
                E    C  CSK +     + +H  R H       C  C K      AL LH  + 
Sbjct: 479 -----EKYYLCTQCSKSFSQISDLIKHQ-RIHTGEKPYKCSECRKAFSQCSALTLH-QRI 531

Query: 478 HPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVG 513
           H G    +  NP C+ CG+  + R  L +H  +H G
Sbjct: 532 HTG----KKPNP-CDECGKSFSRRSDLINHQKIHTG 562

May be involved in transcriptional regulation. Plays a role in the EBV-mediated transformation process.

Homo sapiens (taxid: 9606)

>sp|P17035|ZNF28_HUMAN Zinc finger protein 28 OS=Homo sapiens GN=ZNF28 PE=2 SV=5

 Score = 98.2 bits (243), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 193/522 (36%), Gaps = 84/522 (16%)

Query: 5   HKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKH 64
           H +E    C  C K+F  N SL  H      T  + Y C+           D   S   H
Sbjct: 265 HIDEKPYKCNECGKIFGHNTSLFLHKALH--TADKPYECEE---------CDKVFSRKSH 313

Query: 65  VEEEHP--TMQRRYSCQV-------DTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKH 115
           +E      T  + Y C+V       ++  A      T    Y C+ C K ++R + L +H
Sbjct: 314 LETHKIIYTGGKPYKCKVCDKAFTCNSYLAKHTIIHTGEKPYKCNECGKVFNRLSTLARH 373

Query: 116 VNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQK 175
             R+H G     C  C KV S + HLE+H   H               GE  + C +C K
Sbjct: 374 -RRLHTGEKPYECEECEKVFSRKSHLERHKRIHT--------------GEKPYKCKVCDK 418

Query: 176 QFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLK-HSHTK 234
            F  N  L KH     G K              ++C +C KVF       +H + H+  K
Sbjct: 419 AFAYNSYLAKHSIIHTGEK-------------PYKCNECGKVFNQQSTLARHHRLHTAEK 465

Query: 235 AY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTV 293
            Y CE C     +  K  L  H +  H   + YKC +  C K FR+     +H R H   
Sbjct: 466 PYKCEECDKV--FRCKSHLERHRRI-HTGEKPYKCKV--CDKAFRSDSCLTEHQRVH--- 517

Query: 294 TSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHK 353
           T   P   CN C  +F+ +  L  H K  H       C  C  V    S +E H   +  
Sbjct: 518 TGEKPY-MCNECGKVFSTKANLACHHK-LHTAEKPYKCEECEKVFSRKSHMERH---RRI 572

Query: 354 AIIKKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDV 412
              +KPY C++C +       +++H ++H GE    C  CG  F     L +H   HT  
Sbjct: 573 HTGEKPYKCKVCDKAFRRDSHLAQHQRVHTGEKPYKCNECGKTFRQTSSLIIHRRLHTG- 631

Query: 413 PETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALAL 472
                     E P  C+ C K +     +  H  R H       C  C K+      LA 
Sbjct: 632 ----------EKPYKCNECGKTFSQMSSLVYHH-RLHSGEKPYKCNECGKVFNQQAHLAQ 680

Query: 473 HLDQAHPGYFAEEVDNP-TCEVCGRYHNARPKLESHLAVHVG 513
           H  + H G      + P  C  CG+  +    L  H  +H G
Sbjct: 681 H-QRVHTG------EKPYKCNECGKTFSQMSNLVYHHRLHSG 715

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9HCG1|ZN160_HUMAN Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 PE=2 SV=3

 Score = 96.7 bits (239), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 184/519 (35%), Gaps = 78/519 (15%)

Query: 5   HKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKH 64
           H  E    C  C K FR + +L  H  +   T ++ + C          L   N  L+ H
Sbjct: 335 HTGEKPYKCNECGKAFRGHSNLTTH--QLIHTGEKPFKCNE-----CGKLFTQNSHLISH 387

Query: 65  VEEEHPTMQRRYSCQ-------VDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVN 117
                 T ++ Y C        V +  AI +   T    Y C+ C K +  +++L +H  
Sbjct: 388 WRIH--TGEKPYKCNECGKAFSVRSSLAIHQTIHTGEKPYKCNECGKVFRYNSYLGRH-R 444

Query: 118 RVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQF 177
           RVH G     C  C K  S   +L  H + H               G     C+ C K F
Sbjct: 445 RVHTGEKPYKCNECGKAFSMHSNLATHQVIHT--------------GTKPFKCNECSKVF 490

Query: 178 KQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVF-VNPDIYKKHLKHSHTKAY 236
            QN  L  H++   G K              ++C +C K F V   +      HS  K Y
Sbjct: 491 TQNSQLANHRRIHTGEK-------------PYKCNECGKAFSVRSSLTTHQAIHSGEKPY 537

Query: 237 CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSR 296
              CI      T+   L   +  H   + YKC    C K F       +H R H   T  
Sbjct: 538 --KCIECGKSFTQKSHLRSHRGIHSGEKPYKC--NECGKVFAQTSQLARHWRVH---TGE 590

Query: 297 CPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAII 356
            P   CN C   F++R  L  H ++ H       C  C  V  + S L  H   +     
Sbjct: 591 KPYK-CNDCGRAFSDRSSLTFH-QAIHTGEKPYKCHECGKVFRHNSYLATH---RRIHTG 645

Query: 357 KKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           +KPY C  C +       ++ H  +H GE    C  CG +F     L  H   HT     
Sbjct: 646 EKPYKCNECGKAFSMHSNLTTHKVIHTGEKPYKCNQCGKVFTQNSHLANHQRTHTG---- 701

Query: 416 KEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLD 475
                  E P  C+ C K +  R  +  H    H       C  C K+      LA H  
Sbjct: 702 -------EKPYRCNECGKAFSVRSSLTTHQA-IHTGKKPYKCNECGKVFTQNAHLANH-R 752

Query: 476 QAHPGYFAEEVDNP-TCEVCGRYHNARPKLESHLAVHVG 513
           + H G      + P  C  CG+    R  L +H+A+H G
Sbjct: 753 RIHTG------EKPYRCTECGKAFRVRSSLTTHMAIHTG 785

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q7TSH9|ZN184_MOUSE Zinc finger protein 184 OS=Mus musculus GN=Zfp184 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 190/518 (36%), Gaps = 78/518 (15%)

Query: 6   KEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHV 65
           K+E    C  C K F    +L++H  +   T ++ Y C        N     + +L+ H 
Sbjct: 196 KKEKLCKCNECGKAFTYCSALIRH--QRTHTGEKPYKCNE-----CNKAFSRSENLINH- 247

Query: 66  EEEHPTMQRRYSCQVDTMEAIKEHRKTEHAM-------YVCDLCPKYYSRSTHLWKHVNR 118
            +   T  + Y C       I+    T+H         Y CD C K +S+ THL +H  R
Sbjct: 248 -QRIHTGDKPYKCDQCGKGFIEGPSLTQHQRIHTGEKPYKCDECGKAFSQRTHLVQH-QR 305

Query: 119 VHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFK 178
           +H G    TC  C K  S RGH  +H   H               GE    C  C+K F 
Sbjct: 306 IHTGEKPYTCTECGKSFSQRGHFMEHQKIHT--------------GEKPFKCEECEKTFT 351

Query: 179 QNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIY-KKHLKHSHTKAY- 236
           ++  L +H+K   G K              ++C +C K F  P  + + H+ H+  K Y 
Sbjct: 352 RSTHLTQHQKIHTGEK-------------TYKCNECGKAFNGPSTFIRHHMIHTGEKPYE 398

Query: 237 CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSR 296
           C  C  A  +     L  H KT H   + Y C    C K F       +H + H   T  
Sbjct: 399 CNECGKA--FSQHSNLTQHQKT-HTGEKPYDCA--ECGKAFSYWSSLAQHLKIH---TGE 450

Query: 297 CPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAII 356
            P   C+ C   F+    L  H +  H       CS C      LS L  H         
Sbjct: 451 KPYK-CSDCGKAFSYCSSLTQH-RRIHTREKPFECSECGKAFSYLSNLNQHQKTH---TQ 505

Query: 357 KKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           +K Y C+ C +       +++H ++H GE    C  CG  F     L  H + HT     
Sbjct: 506 EKAYECKECGKAFIRSSSLAKHERIHTGEKPYQCHECGKTFSYGSSLIQHKKIHTG---- 561

Query: 416 KEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLD 475
                  E P  C+ C + +  +  + QH  R H      AC  C K      +LA H  
Sbjct: 562 -------ERPYKCNECGRAFNQKIHLTQHK-RIHTGAKPYACPKCGKTFRHCSSLAQH-Q 612

Query: 476 QAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVG 513
           + H      E     C  C +  +   +L  H  +H G
Sbjct: 613 KTHT-----EEKPYQCNKCEKTFSQNSRLTQHQRIHTG 645

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q3MIS6|ZN528_HUMAN Zinc finger protein 528 OS=Homo sapiens GN=ZNF528 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 164/439 (37%), Gaps = 72/439 (16%)

Query: 97  YVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVD 156
           Y C  C K +S S+ L  H  R+H G     C  C K+ SS  +L +H   H        
Sbjct: 213 YKCSECGKVFSCSSKLVIH-RRMHTGEKPYKCHECGKLFSSNSNLSQHQRIHT------- 264

Query: 157 EPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFR------ 210
                  GE  + CH C K F+ +  L +H++   G K    P    + D +F       
Sbjct: 265 -------GEKPYKCHECDKVFRSSSKLAQHQRIHTGEK----PYKCHECDKVFNQIAHLV 313

Query: 211 -------------CKKCVKVFVNPDIYKKHLK-HSHTKAY-CEVCITAPGYETKVELLHH 255
                        C KC KVF       +H   H+  K Y CE C  A  +  +  L+ H
Sbjct: 314 RHQKIHTGEKPYSCNKCGKVFSRHSYLAEHQTVHTGEKPYKCEECGKA--FSVRSSLITH 371

Query: 256 MKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKL 315
               H   + YKC    C K F  K     H R H    +R     C+ C  +F+ +  L
Sbjct: 372 QLI-HTGRKPYKC--KECDKVFGRKCFLTSHQRIH----TRERPYGCSQCGKIFSQKSDL 424

Query: 316 WLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKV 375
             H K TH D     C+ C       S L AH    H    +KPY C+ C ++      +
Sbjct: 425 IRHRK-THTDEKPYKCNKCGTAFREFSDLTAHFLI-HSG--EKPYECKECGKVFRYKSSL 480

Query: 376 SEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKE 434
           + H ++H GE    C  CG +F     L  H + HT            E P  C+ C K 
Sbjct: 481 TSHHRIHTGEKPYKCNRCGKVFSRSSNLVCHQKIHTG-----------EKPYKCNQCGKV 529

Query: 435 WPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC 494
           +    ++ +H I  H       C  C K       L  HL          E  +  C+ C
Sbjct: 530 FNQASYLTRHQI-IHTGERPYRCSKCGKAFRGCSGLTAHLA------IHTEKKSHECKEC 582

Query: 495 GRYHNARPKLESHLAVHVG 513
           G+    +  L +H  +H+G
Sbjct: 583 GKIFTQKSSLTNHHRIHIG 601

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A6QLU5|ZN184_BOVIN Zinc finger protein 184 OS=Bos taurus GN=ZNF184 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 173/478 (36%), Gaps = 72/478 (15%)

Query: 6   KEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHV 65
           K+E +  C  C K F    +L++H      T ++ Y C              + +L+ H 
Sbjct: 218 KKEKSCKCNECGKAFTYCSALIRHQRTH--TGEKPYKCNE-----CEKAFSRSENLINH- 269

Query: 66  EEEHPTMQRRYSCQVDTMEAIKEHRKTEHAM-------YVCDLCPKYYSRSTHLWKHVNR 118
            +   T  + Y C       I+    T+H         Y CD C K +S+ THL +H  R
Sbjct: 270 -QRIHTGDKPYKCDQCGKGFIEGPSLTQHQRIHTGEKPYKCDECGKAFSQRTHLVQH-QR 327

Query: 119 VHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFK 178
           +H G    TC  C K  S RGH  +H   H               GE    C  C K F 
Sbjct: 328 IHTGEKPYTCNECGKAFSQRGHFMEHQKIHT--------------GEKPFKCDECDKTFT 373

Query: 179 QNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIY-KKHLKHSHTKAY- 236
           ++  L +H+K   G K              ++C +C K F  P  + + H+ H+  K Y 
Sbjct: 374 RSTHLTQHQKIHTGEK-------------TYKCNECGKAFNGPSTFIRHHMIHTGEKPYE 420

Query: 237 CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSR 296
           C  C  A  +     L  H KT H   + Y C    C K F       +H + H   T  
Sbjct: 421 CNECGKA--FSQHSNLTQHQKT-HTGEKPYDCA--ECGKSFSYWSSLAQHLKIH---TGE 472

Query: 297 CPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAII 356
            P   CN C   F+    L  H +  H       CS C      LS L  H         
Sbjct: 473 KPYK-CNECGKAFSYCSSLTQH-RRIHTREKPFECSECGKAFSYLSNLNQHQKTH---TQ 527

Query: 357 KKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           +K Y C+ C +       +++H ++H GE    C  CG  F     L  H + HT     
Sbjct: 528 EKAYECKECGKAFIRSSSLAKHERIHTGEKPYQCHECGKTFSYGSSLIQHRKIHTG---- 583

Query: 416 KEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALH 473
                  E P  C+ C + +     + QH  R H       C  C K      +LA H
Sbjct: 584 -------ERPYKCNECGRAFNQNIHLTQHK-RIHTGAKPYECAECGKAFRHCSSLAQH 633

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	537
328697201	1313	PREDICTED: zinc finger protein Xfin-like	0.772	0.316	0.360	1e-63
307204038	2358	Zinc finger protein Xfin [Harpegnathos s	0.743	0.169	0.303	2e-51
332023786	2181	Zinc finger protein Xfin [Acromyrmex ech	0.743	0.182	0.298	4e-51
322792476	1669	hypothetical protein SINV_80660 [Solenop	0.743	0.239	0.296	6e-51
307180446	2218	Zinc finger protein 91 [Camponotus flori	0.599	0.145	0.329	6e-50
340713787	1457	PREDICTED: zinc finger protein Xfin-like	0.744	0.274	0.294	5e-49
350409409	1953	PREDICTED: hypothetical protein LOC10074	0.744	0.204	0.294	5e-49
328793464	2082	PREDICTED: hypothetical protein LOC72691	0.744	0.192	0.289	3e-48
345479552	2163	PREDICTED: hypothetical protein LOC10067	0.744	0.184	0.280	6e-47
270008760	1122	hypothetical protein TcasGA2_TC015347 [T	0.757	0.362	0.250	6e-34

>gi|328697201|ref|XP_001946001.2| PREDICTED: zinc finger protein Xfin-like [Acyrthosiphon pisum]

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/452 (36%), Positives = 238/452 (52%), Gaps = 37/452 (8%)

Query: 5   HKEEAALSCGNCLKVFRDNLSLLKHVEEEH-PTMQRRYSCQVHIILVLNTLLDDNLS--L 61
           H E   L CG CLKV  D  +L +H++E+H P + +  +    I     T     +    
Sbjct: 508 HAECMPLLCGICLKVHVDVPTLREHIKEKHEPLVSKENAIYCDICGRTYTKWSKMMRHRS 567

Query: 62  LKHVEEEHPTMQRRYSCQVD------------TMEAIKEHRKTEHAMYVCDLCPKYYSRS 109
           + +VE++          +V+            T+E I EHRK +H ++VCDLC KYYS +
Sbjct: 568 IHNVEDQVSHFVTDQLTEVNLKCTLCPDTEFKTVEEISEHRKNDHQLHVCDLCSKYYSGN 627

Query: 110 THLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIA-HDNPNTEVDEPQMNEF---GE 165
            HLWKHV+R HKGHPDVTC +C++ S+S+ HL++H+I  H +P  ++ +   N       
Sbjct: 628 NHLWKHVSRQHKGHPDVTCSLCARTSASKVHLKRHMIKYHSDPVDQLIDKSNNSICAELN 687

Query: 166 SVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYK 225
           +VH C  C K F+   LL+KH K CKG KR   P+P+  E G + C KC K F       
Sbjct: 688 AVHQCIRCDKVFRIRSLLKKHLKYCKG-KRDAMPIPK--EKGHYPCTKCGKTFEYQTYLN 744

Query: 226 KHLKHSHTKAYCEVCI---TAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLD 282
           +HLKHSH   YCE+C    T   ++ K+ L+ H++ +H ++ E  C I GC K  RTK+D
Sbjct: 745 RHLKHSHLVQYCEICSEDKTGEHFDNKMLLMDHIRDKHGNDPELCCDIEGCDKVMRTKVD 804

Query: 283 CQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLS 342
           CQKH R+H     +  +  C FC D+ +N+K    HL+  HK  T  +C  C  V  +  
Sbjct: 805 CQKHKRDH---VRKVFSYVCEFCGDMHSNKKTYRKHLRQRHKGNTQYLCGVCMEVCVDND 861

Query: 343 ALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHI-KLHGEHLVNCRVCGSIFHSEPE 401
            L  H+   H     K   C+IC ++   G KV EHI K+HG++L  C++C  +F    +
Sbjct: 862 GLSKHLHEAHPQTFSKSNICQICGKMFTLGSKVGEHIDKIHGKNLKPCKICWKVFSDMDK 921

Query: 402 LKVHLEEH--------TDVPETKEQKPRPELP 425
           LK H+E H           P  K  +P+P+ P
Sbjct: 922 LKDHIENHPAKEDFPKVTTPVKKPIEPKPKTP 953

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204038|gb|EFN82942.1| Zinc finger protein Xfin [Harpegnathos saltator]

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 222/448 (49%), Gaps = 49/448 (10%)

Query: 5    HKEEAALSCGNCLKVFRDNLSLLKHVEEEH-PTMQRRYSCQV--------------HIIL 49
            H +     CG CLK+F D + L +HV+E+H P     + C +                I 
Sbjct: 811  HSDTVPRVCGVCLKIFSDVVQLSRHVKEKHWPLTGGDFCCDICGRPYSNKSKMSRHRKIH 870

Query: 50   VLNTLLDDNLSLLKHVEEE-----HPTMQRRYSC------QVDTMEAIKEHRKTEHAMYV 98
             L     DN S+ +   E      +   +   SC      +  T++++  HR+  H+++ 
Sbjct: 871  GLEVDACDNSSINETTNESSKLDHNGAAEVELSCDQCPDLKFSTLDSLVNHRRLVHSLFP 930

Query: 99   CDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEP 158
            CDLC K Y R++HLWKHVNRVHKGH DVTC  C K S+SR HL  H+        +V + 
Sbjct: 931  CDLCNKCYGRTSHLWKHVNRVHKGHTDVTCPYCMKTSASRDHLMAHIAKIHRYELDVSKN 990

Query: 159  QMN---------EFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIF 209
            +MN         E G  VH C  C K F + +LL++H K C+  ++    L       + 
Sbjct: 991  RMNCVTRKSSSTEDG-VVHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGAL-------LT 1042

Query: 210  RCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCL 269
            RC+ C ++F +    +KH+++ H+   C +C       +K+ ++ H +  H D+ +  C 
Sbjct: 1043 RCRACERIFKDRASLQKHIENHHSTYTCHLCNET--ITSKLGIMTHNRVNHMDHPDLTCE 1100

Query: 270  IPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNC 329
             P CKK FRTK D + H ++HK  ++    N C+FC D   N+ KL +H+ S H++    
Sbjct: 1101 HPSCKKLFRTKEDLESHRKDHKHHSN---LNVCDFCGDTVENKLKLKMHVLSLHRNEIGV 1157

Query: 330  MCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHI-KLHGEHLVN 388
             C  C +   +   L+ HV  +H  ++ KP  C++C +   +  K  +H  K HG+  + 
Sbjct: 1158 SCGVCLIPMKDPKDLKKHVETEHSGVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFLT 1217

Query: 389  CRVCGSIFHSEPELKVHLEEHTDVPETK 416
            C+ C ++F  E +++ H E   +VP+ +
Sbjct: 1218 CKQCLAVFTDENDIREHYEHTHNVPKDQ 1245

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023786|gb|EGI64010.1| Zinc finger protein Xfin [Acromyrmex echinatior]

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 221/452 (48%), Gaps = 53/452 (11%)

Query: 5    HKEEAALSCGNCLKVFRDNLSLLKHVEEEH-PTMQRRYSCQV--------------HIIL 49
            H +   L CG CLKVF D + L  HV+ +H P     + C +                I 
Sbjct: 843  HADTVPLICGVCLKVFSDVMQLSAHVKAKHWPLTSGDFCCDICGRPYSNKSKMSRHRKIH 902

Query: 50   VLNTLLD---DNLSLLKHVEEEHPTMQRRYSCQVD------------TMEAIKEHRKTEH 94
             L   +D   DN S  +   E         + +++            T++++  HR+  H
Sbjct: 903  GLEAAMDAACDNSSFNETTNESVKPDHSNGASEIELNCEQCPELSFTTLDSLCNHRRITH 962

Query: 95   AMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHL--------- 145
             ++ CDLC K Y R++HLWKHVNRVHKGH DVTC  C+K S+SR HL  H+         
Sbjct: 963  NLFPCDLCNKCYGRTSHLWKHVNRVHKGHTDVTCPYCAKTSASRDHLAAHIAKIHRFMPT 1022

Query: 146  IAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDE 205
            +  DN N  V    ++     +H C  C K F + +LL++H K C+  ++    L     
Sbjct: 1023 VGKDNQNC-VTSKSLSADDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGAL----- 1076

Query: 206  DGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEE 265
              + RC+ C ++F +    +KH+++ HT   C +C       +K+ ++ H +  H D+ +
Sbjct: 1077 --LTRCRACERIFKDRASLQKHIENHHTTYTCHLC--NETITSKLGIMTHNRINHMDHPD 1132

Query: 266  YKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKD 325
              C  P CKK FRTK D + H ++HK  ++    + C+FC D   N+ KL +H+ S H++
Sbjct: 1133 LTCDHPSCKKLFRTKEDLESHRKDHKYHSN---LDVCDFCGDTVENKLKLKMHVLSLHRN 1189

Query: 326  LTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHI-KLHGE 384
                 C  C +   +   L+ HV A H +++ KP  C++C +   +  K  +H  K HG+
Sbjct: 1190 EIGVSCGVCLIPMKDPKDLKKHVEAVHSSVLSKPNTCQVCGKQYASKWKAFDHTKKCHGK 1249

Query: 385  HLVNCRVCGSIFHSEPELKVHLEEHTDVPETK 416
              + C+ C ++F  E +++ H E   +VP+ +
Sbjct: 1250 VFLTCKQCLAVFTDENDIRDHYEHVHNVPKDQ 1281

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322792476|gb|EFZ16460.1| hypothetical protein SINV_80660 [Solenopsis invicta]

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 223/456 (48%), Gaps = 57/456 (12%)

Query: 5    HKEEAALSCGNCLKVFRDNLSLLKHVEEEH-PTMQRRYSCQV------------------ 45
            H +   L CG CLKVF D + L  HV+ +H P     + C +                  
Sbjct: 810  HADTVPLICGVCLKVFSDVMQLSAHVKAKHWPLTSGDFCCDICGRPYSNKSKMSRHRKIH 869

Query: 46   ----HIILVLNTLLDD---NLSLLKHVEEEHPT--MQRRYSCQ------VDTMEAIKEHR 90
                     ++   D+   N +  + V+ EH     +   +C+        T++++  HR
Sbjct: 870  GLEAATAAAMDVTCDNSSFNETTNESVKPEHSNGASELELNCEQCPELSFTTLDSLCNHR 929

Query: 91   KTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHL----- 145
            +  H ++ CDLC K Y R++HLWKHVNRVHKGH DVTC  CSK S+SR HL  H+     
Sbjct: 930  RIAHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHADVTCPYCSKTSASRDHLAAHIAKIHR 989

Query: 146  ----IAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLP 201
                +  D  N    +    E G  +H C  C K F + +LL++H K C+  ++    L 
Sbjct: 990  FMPAMGKDTQNCVTSKSLSVEDG-VLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGAL- 1047

Query: 202  EPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHK 261
                  + RC+ C ++F +    +KH+++ H+   C +C       +K+ ++ H +  H 
Sbjct: 1048 ------LTRCRACERIFKDRASLQKHIENHHSTYTCHLCNET--ITSKLGIMTHNRVNHM 1099

Query: 262  DNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKS 321
            D+ +  C  P CKK FRTK D + H +EHK  ++    N C+FC D   N+ KL +H+ S
Sbjct: 1100 DHPDLTCDHPSCKKLFRTKEDLEAHRKEHKYHSN---PNVCDFCGDTVENKLKLKMHVLS 1156

Query: 322  THKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHI-K 380
             H++     C  C +   +   L+ HV A+H +++  P  C++C +   +  K  +H  K
Sbjct: 1157 LHRNEIGVSCGVCLIPMKDPKDLKKHVEAEHSSVLSNPNTCQVCGKQYASKWKAFDHTKK 1216

Query: 381  LHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETK 416
             HG+  + C+ C ++F +E +++ H E   +VP+ +
Sbjct: 1217 CHGKVFITCKQCLAVFTNENDIRDHYEHVHNVPKDQ 1252

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180446|gb|EFN68472.1| Zinc finger protein 91 [Camponotus floridanus]

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 187/346 (54%), Gaps = 24/346 (6%)

Query: 82   TMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHL 141
            T+++++ HR+  H ++ CDLC KYY R++HLWKHVNRVHKGH DVTC  C+K S+SR HL
Sbjct: 977  TLDSLRNHRRAIHNLFPCDLCVKYYGRTSHLWKHVNRVHKGHADVTCPYCAKTSASRDHL 1036

Query: 142  EKHLI----------AHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCK 191
              H+             DN N  V +    E G  +H C  C K F + +LL++H K C+
Sbjct: 1037 TAHIAKIHRYIPTIGGKDNQNCVVSKSLNIEDG-ILHYCEKCNKGFHKRYLLRRHMKGCQ 1095

Query: 192  GPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVE 251
              ++    L       + RC+ C ++F +    +KH+++ H+   C +C       +K+ 
Sbjct: 1096 NYRKDPGAL-------LTRCRACERIFKDRASLQKHIENHHSTYTCHLCNET--ITSKLG 1146

Query: 252  LLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTN 311
            ++ H +  H D+ +  C  P CKK FRTK D + H ++HK  ++    N C+FC D   N
Sbjct: 1147 IMTHNRVNHMDHPDLTCDHPSCKKLFRTKEDLESHRKDHKYHSN---PNVCDFCGDTVEN 1203

Query: 312  RKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGN 371
            + KL +H+ S H++     C  C +   +   L+ HV A+H +++  P  C++C +   +
Sbjct: 1204 KLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEAEHSSVLSNPNTCQVCGKQYAS 1263

Query: 372  GVKVSEHI-KLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETK 416
              K  +H  K HG+  + C+ C ++F  E  ++ H E   +VP+ +
Sbjct: 1264 KWKAFDHTKKCHGKVFLTCKQCLAVFTDENAIRDHYEHVHNVPKDQ 1309

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713787|ref|XP_003395417.1| PREDICTED: zinc finger protein Xfin-like [Bombus terrestris]

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 214/438 (48%), Gaps = 38/438 (8%)

Query: 5    HKEEAALSCGNCLKVFRDNLSLLKHVEEEH-PTMQRRYSCQVHIILVLNTLLDDNLSLLK 63
            H +   L CG CLKVF + L L  HV  +H P     +SC +      N         + 
Sbjct: 835  HSDTVPLICGVCLKVFPNVLQLSTHVRSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIH 894

Query: 64   HVEE-------------EHPTMQRRYSCQV------DTMEAIKEHRKTEHAMYVCDLCPK 104
              EE             E    +   SC++        +E +  HR+  H ++ CDLC K
Sbjct: 895  GFEESCENGAENSENKAEGRMRETELSCELCADLKFTNLEKLCNHRRIVHGLFPCDLCNK 954

Query: 105  YYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHL--IAHDNPNTEVDEPQMNE 162
             Y R++HLWKHVNRVHKGH DVTC  C K S+S+ HL  H+  I    P++  D     +
Sbjct: 955  CYGRTSHLWKHVNRVHKGHEDVTCPYCMKTSASKDHLAAHISKIHRYEPDSRKDGKDNRQ 1014

Query: 163  FGE---SVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFV 219
            F     S+H C  C K F + +LL++H K C+  ++    L       + RC+ C ++F 
Sbjct: 1015 FKTEEVSLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGAL-------LTRCRACERIFK 1067

Query: 220  NPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRT 279
            +    +KH+++ H+   C +C       +K+ ++ H + +H D+ +  C    C+K FRT
Sbjct: 1068 DRASLQKHIENHHSTYTCHLCNET--ITSKLGIMTHNRVKHMDHPDLTCNFGSCRKLFRT 1125

Query: 280  KLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVED 339
            K D + H ++H+  T+    N C+FC D   N+ KL +H+ S H++     C  C +   
Sbjct: 1126 KEDLEAHRKDHRYHTT---PNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMK 1182

Query: 340  NLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHI-KLHGEHLVNCRVCGSIFHS 398
            +   L++HV   H +++ +P  C++C +   +  K  +H  K HG+    C+ C ++F  
Sbjct: 1183 DPKELKSHVEEVHSSVLSRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTE 1242

Query: 399  EPELKVHLEEHTDVPETK 416
            +  ++ H E   ++P+ +
Sbjct: 1243 DSAIRDHYETIHNIPKDQ 1260

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409409|ref|XP_003488726.1| PREDICTED: hypothetical protein LOC100747641 [Bombus impatiens]

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 215/438 (49%), Gaps = 38/438 (8%)

Query: 5    HKEEAALSCGNCLKVFRDNLSLLKHVEEEH-PTMQRRYSCQVHIILVLNTLLDDNLSLLK 63
            H +   L CG CLKVF + L L  HV  +H P     +SC +      N         + 
Sbjct: 835  HSDTVPLICGVCLKVFPNVLQLSTHVRSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIH 894

Query: 64   HVEE-------------EHPTMQRRYSCQV------DTMEAIKEHRKTEHAMYVCDLCPK 104
              EE             E    +   SC++       ++E +  HR+  H ++ CDLC K
Sbjct: 895  GFEESCENGAENSENKVEGRMRETELSCELCADLKFTSLEKLCNHRRIVHGLFPCDLCNK 954

Query: 105  YYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHL--IAHDNPNTEVDEPQMNE 162
             Y R++HLWKHVNRVHKGH DVTC  C K S+S+ HL  H+  I    P++  D     +
Sbjct: 955  CYGRTSHLWKHVNRVHKGHEDVTCPYCMKTSASKDHLAAHISKIHRYEPDSRKDGKDNRQ 1014

Query: 163  FGE---SVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFV 219
            F     S+H C  C K F + +LL++H K C+  ++    L       + RC+ C ++F 
Sbjct: 1015 FKTEEVSLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGAL-------LTRCRACERIFK 1067

Query: 220  NPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRT 279
            +    +KH+++ H+   C +C       +K+ ++ H + +H D+ +  C    C+K FRT
Sbjct: 1068 DRASLQKHIENHHSTYTCHLCNET--ITSKLGIMTHNRVKHMDHPDLTCNFGSCRKLFRT 1125

Query: 280  KLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVED 339
            K D + H ++H+  T+    N C+FC D   N+ KL +H+ S H++     C  C +   
Sbjct: 1126 KEDLETHRKDHRYHTT---PNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMK 1182

Query: 340  NLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHI-KLHGEHLVNCRVCGSIFHS 398
            +   L++HV   H +++ +P  C++C +   +  K  +H  K HG+    C+ C ++F  
Sbjct: 1183 DPKELKSHVEEVHSSVLSRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTE 1242

Query: 399  EPELKVHLEEHTDVPETK 416
            +  ++ H E   ++P+ +
Sbjct: 1243 DSAIRDHYETIHNIPKDQ 1260

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328793464|ref|XP_001122633.2| PREDICTED: hypothetical protein LOC726916 [Apis mellifera]

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 214/439 (48%), Gaps = 39/439 (8%)

Query: 5    HKEEAALSCGNCLKVFRDNLSLLKHVEEEH-PTMQRRYSCQV--------------HIIL 49
            H +   L CG CLKVF + L L  HV  +H P     +SC +                I 
Sbjct: 941  HSDTVPLICGVCLKVFPNVLQLSTHVRSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIH 1000

Query: 50   VLNTLLDDNLSLLKHVEEEHPTMQRRYSCQV------DTMEAIKEHRKTEHAMYVCDLCP 103
                  D+ +      + +    +   SC++        +E +  HR+  H ++ CDLC 
Sbjct: 1001 GFEENCDNEIENNSENKVDGRIRETDLSCELCADLKFTNLEKLCNHRRIIHGLFPCDLCN 1060

Query: 104  KYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHL--IAHDNPNTEVDEPQMN 161
            K Y R++HLWKHVNRVHKGH DVTC  C K S+S+ HL  H+  I    P++  D     
Sbjct: 1061 KCYGRTSHLWKHVNRVHKGHEDVTCPYCLKTSASKDHLAAHISKIHRYEPDSRKDGKDNR 1120

Query: 162  EFGE---SVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVF 218
            +F     S+H C  C K F + +LL++H K C+  ++    L       + RC+ C ++F
Sbjct: 1121 QFKTEEVSLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGAL-------LTRCRACERIF 1173

Query: 219  VNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFR 278
             +    +KH+++ H+   C +C       +K+ ++ H + +H D+ +  C    C+K FR
Sbjct: 1174 KDRASLQKHIENHHSTYTCHLC--NETIISKLGIMTHNRVKHMDHPDLTCNFGSCRKLFR 1231

Query: 279  TKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVE 338
            TK D + H ++H+  T+    N C+FC D   N+ KL +H+ S H++     C  C +  
Sbjct: 1232 TKEDLETHRKDHRYHTT---PNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPM 1288

Query: 339  DNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHI-KLHGEHLVNCRVCGSIFH 397
             +   L+ HV   H +++ +P  C++C +   +  K  +H  K HG+    C+ C ++F 
Sbjct: 1289 KDPKELKNHVEEVHSSVLSRPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFT 1348

Query: 398  SEPELKVHLEEHTDVPETK 416
             +  ++ H E   ++P+ +
Sbjct: 1349 EDSTIRDHYERIHNIPKDQ 1367

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345479552|ref|XP_003423975.1| PREDICTED: hypothetical protein LOC100678349 [Nasonia vitripennis]

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 229/478 (47%), Gaps = 78/478 (16%)

Query: 5    HKEEAALSCGNCLKVFRDNLSLLKHVEEEH-PTMQRRYSCQV------------------ 45
            H +   L CG CLKVF D + L +HV+ +H P     +SC +                  
Sbjct: 858  HADTVPLICGVCLKVFPDVMQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIH 917

Query: 46   ------------HIILVLN------TLLDDNLSLLKHVEEEHPTMQRRYSCQV------D 81
                        +  L++N      T L   LSL   + +    +    SC++      +
Sbjct: 918  GLDGEVYNPSATNSSLIINDASSEMTGLPMPLSLDNGMPQPIEPVSLDLSCEMCGDLKFN 977

Query: 82   TMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHL 141
            ++E +  HR+  H+++ CDLC K Y R++HLWKHVNRVHKGH DVTCR C K S+S+ HL
Sbjct: 978  SLEDLGNHRRMAHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRFCLKTSASKDHL 1037

Query: 142  EKHL---------------IAHDN---PNTEVDEPQMNEFG----ESVHICHLCQKQFKQ 179
              H+               I  DN    N+  +   M        + +H C  C K F +
Sbjct: 1038 AAHIAKIHRYEPDVKSEMEIKRDNMVYKNSSSNYYHMAAAQSPEEDGLHFCEKCNKSFHK 1097

Query: 180  NWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEV 239
             +LL++H K C+  ++  + L       + RC+ C ++F +    +KH+++ H+   C +
Sbjct: 1098 RYLLRRHMKGCQNYRKDPAAL-------LTRCRACERIFKDRASLQKHIENHHSSYECHL 1150

Query: 240  CITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPT 299
            C       +K+ ++ H +  H  + +  C +  C+K FRTK D + H ++H+ + +    
Sbjct: 1151 CKET--ITSKLGIMTHNRMHHMHHPDLTCELEHCRKLFRTKEDLELHRKDHQHLGT---P 1205

Query: 300  NYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKP 359
            N C+FC D   N+ KL +H+ S H++     C  C +   +   L+ HV   H++I+ +P
Sbjct: 1206 NVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHESILLRP 1265

Query: 360  YACRICARLLGNGVKVSEHIKL-HGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETK 416
              C++C +   +  K  +H K  HG+    C+ C ++F S+ +L+ H E   ++P+ +
Sbjct: 1266 NTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRYHYEHIHNIPKDQ 1323

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008760|gb|EFA05208.1| hypothetical protein TcasGA2_TC015347 [Tribolium castaneum]

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 224/527 (42%), Gaps = 120/527 (22%)

Query: 5   HKEEAALSCGNCLKVFRDNLSLLKHVE---EEHPTMQRRYSCQV------------HIIL 49
           H +++AL CG CL       +L  HVE    +HPT   +Y CQV            + IL
Sbjct: 305 HSDQSALLCGMCLYQASSLANLQSHVELCSHQHPTTT-KYVCQVCRYGDDNSKSLENHIL 363

Query: 50  VLNTLLD------------DNLSLLKHVEEEHPT-MQRRYSCQ---VDTMEAIKE---HR 90
           V + LLD            D +    + E    + M +  +C    +D  +  KE   HR
Sbjct: 364 VHDFLLDACKKQSKMFDPADYIETNGNYESGGSSPMTKSLACSECGMDDFDNFKEFSTHR 423

Query: 91  KTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLI---- 146
           +++H+++ CDLC K+Y R++HLWKHVNR+HKGHP +TC++C K S+S+ HL +H      
Sbjct: 424 RSQHSIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCYKTSASKYHLAQHFNKIHS 483

Query: 147 ------AHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKR----- 195
                 + +  N +  +  M++  ++     + Q   +Q  L Q+ KK  +         
Sbjct: 484 TKSCKKSENQLNFDNTDDFMSQKFQAFDFQSVKQSFMRQELLEQQEKKFSENDDNSNNHL 543

Query: 196 -----PTSP----------------LPEPDEDGIFR------------------------ 210
                P++P                   P  +G F+                        
Sbjct: 544 SDQEPPSAPKEIDSSSDLYTNIITNYTPPANEGEFKCPKCGKGFHKKTLLKKHKKNCRPR 603

Query: 211 --------CKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKD 262
                   CK C ++F +     KHL + H++  CE+C      ++K E++ H++  H  
Sbjct: 604 LQKDLLTRCKSCARIFKDRQSLAKHLVNYHSEYACEIC--GQKVQSKCEIVSHIRFTHPG 661

Query: 263 NEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKST 322
              + C I  C    R++ D   H R+H        +  C FCAD   ++ KL +H+ S 
Sbjct: 662 CHLF-CTI--CGNILRSRNDMADHTRDHMN------SYVCQFCADALPSKIKLKMHILSL 712

Query: 323 HKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHI-KL 381
           H+ + +  C  C  + +    L  HV   H+  +    +C +C +  G+  K  +H+ K 
Sbjct: 713 HRKILSLSCGVCLKLFETQHVLRDHVRLVHRDQLAPLTSCPVCGKNYGSKWKTYDHLNKS 772

Query: 382 HGEHLVNCRVCGSIFHSEPELKVHLEE-----HTDVPETKEQKPRPE 423
           HG     C+ C  +F +E +L+ H +        ++P    Q  +P+
Sbjct: 773 HGRIFKACKACLEVFDNENQLQAHYDSVHGGGKNNIPVVTSQVSQPQ 819

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	537
UNIPROTKB|F1LMA0	956	Zfp26 "Protein Zfp26" [Rattus	0.905	0.508	0.254	3e-29
RGD|1565847	960	Zfp26 "zinc finger protein 26"	0.905	0.506	0.254	3.1e-29
ZFIN|ZDB-GENE-120214-27	493	si:ch73-367f21.4 "si:ch73-367f	0.733	0.799	0.269	4.4e-29
MGI|MGI:99173	861	Zfp26 "zinc finger protein 26"	0.905	0.564	0.252	5.7e-29
RGD|1309670	1812	Zfp236 "zinc finger protein 23	0.452	0.134	0.263	7.5e-20
UNIPROTKB|Q9UL36	1845	ZNF236 "Zinc finger protein 23	0.201	0.058	0.351	7.2e-27
UNIPROTKB|J9JID5	1847	ZNF236 "Zinc finger protein 23	0.201	0.058	0.351	7.2e-27
ZFIN|ZDB-GENE-110913-157	981	si:ch211-245n8.1 "si:ch211-245	0.867	0.475	0.245	6.6e-26
UNIPROTKB|F1MX34	1053	F1MX34 "Uncharacterized protei	0.852	0.434	0.252	9.7e-26
ZFIN|ZDB-GENE-110913-148	1029	si:dkey-14o6.6 "si:dkey-14o6.6	0.880	0.459	0.245	1.2e-25

UNIPROTKB|F1LMA0 Zfp26 "Protein Zfp26" [Rattus norvegicus (taxid:10116)]

 Score = 350 (128.3 bits), Expect = 3.0e-29, P = 3.0e-29
 Identities = 146/574 (25%), Positives = 218/574 (37%)

Query:     2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIIXXXXXXXXXXXXX 61
             V  H  E    C  C K F +  SL+ H+ + H T ++ Y C+                 
Sbjct:   360 VQSHTVEKPYDCKECGKAFTERSSLIVHLRQ-H-TREKSYECK-----ECGKTFIQPSRL 412

Query:    62 XKHVEEEHPTMQRRYSC-QVDTMEA----IKEHRKTE--HAMYVCDLCPKYYSRSTHLWK 114
              +H+   H T ++ Y C Q     A    +  H +T      + C++C K ++RS++L  
Sbjct:   413 TEHMRS-H-TGEKPYQCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLG 470

Query:   115 HVNRVHKGHPDVTCRICSKVSSSRG----HLEKHLIAHDNPNTEVDEP-----QMNEF-- 163
             H+ R H G     C++C K  S R     HL KH      P TE ++      Q+ E   
Sbjct:   471 HI-RTHTGEKPYECKVCGKAFSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIK 529

Query:   164 ---GESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVN 220
                GE    C +C + F+ +  L+ H +   G K    P         ++C  C K F  
Sbjct:   530 THTGEKPFRCKVCARTFRNSSCLKTHFRIHTGIK----P---------YKCNYCGKDFTA 576

Query:   221 PDIYKKH-LKHSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFR 278
                  KH L H+  K Y C+ C  A  + T   L+ H++  H   + ++C    C K   
Sbjct:   577 RSGLTKHVLIHNGEKPYECKECGKA--FSTSSGLVEHIRI-HTGEKPFECY--QCGKALA 631

Query:   279 TKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVE 338
                    H R H   T   P   CN C   FT    L +H++ TH       C  C    
Sbjct:   632 HSSSLVGHLRTH---TGEKPFE-CNQCDKTFTRSSYLRIHMR-THTGEKPYECKECGKTF 686

Query:   339 DNLSALEXXXXXXXXXXXXXPYACRICARLLGNGVKVSEHIKLHG-EHLVNCRVCGSIFH 397
                S L              PY C+ C +   +  +++ HIK H  E    C+VC   F 
Sbjct:   687 PERSCL---TKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSSERPFQCKVCTKSFR 743

Query:   398 SEPELKVHLEEHTDV-PET-----KEQKPRPELPV-----------TCDLCSKEWPSRKF 440
             +   L+ H   HT V P       K+   R  L +            C  C K + +   
Sbjct:   744 NSSSLETHFRIHTGVKPYKCSYCGKDFTARSGLTIHLRNHTGEKSYACQECGKAFSTSSG 803

Query:   441 MWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNP-TCEVCGRYHN 499
             +  H IRSHK      C  C K   +   L +HL + H G      + P  C VCG+   
Sbjct:   804 LIAH-IRSHKGEKPFECDHCGKAFASSSYLNVHL-KIHTG------EKPFQCTVCGKTFT 855

Query:   500 ARPKLESHLAVHVGLDKSQTLL--HKCIWTRHIR 531
                 L  H+  H G    Q ++     +W+ ++R
Sbjct:   856 CSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLR 889

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1565847 Zfp26 "zinc finger protein 26" [Rattus norvegicus (taxid:10116)]

 Score = 350 (128.3 bits), Expect = 3.1e-29, P = 3.1e-29
 Identities = 146/574 (25%), Positives = 218/574 (37%)

Query:     2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIIXXXXXXXXXXXXX 61
             V  H  E    C  C K F +  SL+ H+ + H T ++ Y C+                 
Sbjct:   364 VQSHTVEKPYDCKECGKAFTERSSLIVHLRQ-H-TREKSYECK-----ECGKTFIQPSRL 416

Query:    62 XKHVEEEHPTMQRRYSC-QVDTMEA----IKEHRKTE--HAMYVCDLCPKYYSRSTHLWK 114
              +H+   H T ++ Y C Q     A    +  H +T      + C++C K ++RS++L  
Sbjct:   417 TEHMRS-H-TGEKPYQCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLG 474

Query:   115 HVNRVHKGHPDVTCRICSKVSSSRG----HLEKHLIAHDNPNTEVDEP-----QMNEF-- 163
             H+ R H G     C++C K  S R     HL KH      P TE ++      Q+ E   
Sbjct:   475 HI-RTHTGEKPYECKVCGKAFSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIK 533

Query:   164 ---GESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVN 220
                GE    C +C + F+ +  L+ H +   G K    P         ++C  C K F  
Sbjct:   534 THTGEKPFRCKVCARTFRNSSCLKTHFRIHTGIK----P---------YKCNYCGKDFTA 580

Query:   221 PDIYKKH-LKHSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFR 278
                  KH L H+  K Y C+ C  A  + T   L+ H++  H   + ++C    C K   
Sbjct:   581 RSGLTKHVLIHNGEKPYECKECGKA--FSTSSGLVEHIRI-HTGEKPFECY--QCGKALA 635

Query:   279 TKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVE 338
                    H R H   T   P   CN C   FT    L +H++ TH       C  C    
Sbjct:   636 HSSSLVGHLRTH---TGEKPFE-CNQCDKTFTRSSYLRIHMR-THTGEKPYECKECGKTF 690

Query:   339 DNLSALEXXXXXXXXXXXXXPYACRICARLLGNGVKVSEHIKLHG-EHLVNCRVCGSIFH 397
                S L              PY C+ C +   +  +++ HIK H  E    C+VC   F 
Sbjct:   691 PERSCL---TKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSSERPFQCKVCTKSFR 747

Query:   398 SEPELKVHLEEHTDV-PET-----KEQKPRPELPV-----------TCDLCSKEWPSRKF 440
             +   L+ H   HT V P       K+   R  L +            C  C K + +   
Sbjct:   748 NSSSLETHFRIHTGVKPYKCSYCGKDFTARSGLTIHLRNHTGEKSYACQECGKAFSTSSG 807

Query:   441 MWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNP-TCEVCGRYHN 499
             +  H IRSHK      C  C K   +   L +HL + H G      + P  C VCG+   
Sbjct:   808 LIAH-IRSHKGEKPFECDHCGKAFASSSYLNVHL-KIHTG------EKPFQCTVCGKTFT 859

Query:   500 ARPKLESHLAVHVGLDKSQTLL--HKCIWTRHIR 531
                 L  H+  H G    Q ++     +W+ ++R
Sbjct:   860 CSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLR 893

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-120214-27 si:ch73-367f21.4 "si:ch73-367f21.4" [Danio rerio (taxid:7955)]

 Score = 339 (124.4 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 126/468 (26%), Positives = 187/468 (39%)

Query:    82 TMEAIKEHR--KTEHAMYVCDLCPKYYSRSTHLWKHVNRVHKG-HPDVTCRICSKVSSSR 138
             T ++++ H+   T   +++C  C K +++  +L  H  ++H G HP  TC  C K  + +
Sbjct:    48 TNQSLESHKVIHTGEHIFICSECGKSFTQMRYLKNH-RKIHTGDHP-FTCPECDKCFTMK 105

Query:   139 GHLEKHLIAH--DNPNTEVD-----------EPQMN-EFGESVHICHLCQKQFKQNWLLQ 184
               LE HL  H  + P T  D           E  M    GE  + C  C K F++  +L 
Sbjct:   106 HSLESHLKIHTGEKPFTCPDCGKKFRIKHSLEGHMRIHTGEKPYKCRECGKNFREKQILD 165

Query:   185 KHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLK-HSHTKAY-CEVCIT 242
             KH     G K P S  PE   +  FR KKC++          H+K H+  K Y C+ C  
Sbjct:   166 KHLTIHTGEK-PYS-CPECGRN--FRVKKCLE---------NHIKTHTGEKPYTCQDC-- 210

Query:   243 APGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYC 302
                +  K  L  HM+  H   + Y C  P C + FR K D + H R H   T   P + C
Sbjct:   211 GISFAVKQNLKRHMRI-HTGEKPYSC--PECGRSFRVKQDLKSHVRIH---TGEKPFS-C 263

Query:   303 NFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEXXXXXXXXXXXXXPYAC 362
               C   F+  K L  H++  H       CS C     N    +             PY+C
Sbjct:   264 QQCGKSFSENKTLESHMR-IHTGEKPFTCSQC---GKNFRRKQNLKSHMRLHTGDKPYSC 319

Query:   363 RICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD---------- 411
               C +       +  HI+ H GE    C  CG  F  +  L+ H++ HT           
Sbjct:   320 PQCGKSYNEQKSLENHIRTHTGEKPFACDQCGKTFTQQSTLRGHIKIHTGEKPFTCPQCG 379

Query:   412 ---VPETKEQKPRP----ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKIS 464
                +  TK ++ +     E P  C  C K +  ++ +  H+ R H       C  C K  
Sbjct:   380 KSFIERTKLERHKKIHSGEKPFDCHHCKKSFTMKQSLDIHM-RIHTGEKLYTCQQCKKSF 438

Query:   465 ETYEALALHLDQAHPGYFAEEVDNP-TCEVCGRYHNARPKLESHLAVH 511
                +    H+   H G      + P TC+ CG+    + KL SH+ VH
Sbjct:   439 AVKQKFDSHMT-IHTG------EKPYTCQQCGKCFREKRKLVSHMKVH 479

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:99173 Zfp26 "zinc finger protein 26" [Mus musculus (taxid:10090)]

 Score = 347 (127.2 bits), Expect = 5.7e-29, P = 5.7e-29
 Identities = 145/574 (25%), Positives = 217/574 (37%)

Query:     2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIIXXXXXXXXXXXXX 61
             +  H  E    C  C K F +  SL+ H+ + H T ++ Y C+                 
Sbjct:   265 MQSHTVEKPYDCKECGKAFTERSSLIVHLRQ-H-TREKSYECK-----ECGKTFIQPSRL 317

Query:    62 XKHVEEEHPTMQRRYSC-QVDTMEA----IKEHRKTE--HAMYVCDLCPKYYSRSTHLWK 114
              +H+   H T ++ Y C Q     A    +  H +T      + C++C K ++RS++L  
Sbjct:   318 TEHMRS-H-TGEKPYQCDQCGNAFASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLG 375

Query:   115 HVNRVHKGHPDVTCRICSKVSSSRG----HLEKHLIAHDNPNTEVDEP-----QMNEF-- 163
             H+ R H G     C++C K  S R     HL KH      P TE ++      Q+ E   
Sbjct:   376 HI-RTHTGEKPYECKVCGKAFSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIK 434

Query:   164 ---GESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVN 220
                GE    C +C + F+ +  L+ H +   G K    P         ++C  C K F  
Sbjct:   435 THTGEKPFRCKVCARTFRNSSCLKTHFRIHTGIK----P---------YKCNYCGKAFTA 481

Query:   221 PDIYKKH-LKHSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFR 278
                  KH L H+  K Y C+ C  A  + T   L+ H++  H   + ++C    C K   
Sbjct:   482 RSGLTKHVLIHNGEKPYECKECGKA--FSTSSGLVEHIRI-HTGEKPFECY--QCGKALA 536

Query:   279 TKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVE 338
                    H R H   T   P   CN C   FT    L +H++ TH       C  C    
Sbjct:   537 HSSSLVGHLRTH---TGEKPFE-CNQCDKTFTRSSYLRIHMR-THTGEKPYECKECGKTF 591

Query:   339 DNLSALEXXXXXXXXXXXXXPYACRICARLLGNGVKVSEHIKLHG-EHLVNCRVCGSIFH 397
                S L              PY C+ C +   +  +++ HIK H  E    C+VC   F 
Sbjct:   592 PERSCL---TKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSSERPFQCKVCTKSFR 648

Query:   398 SEPELKVHLEEHTDV-PET-----KEQKPRPELPV-----------TCDLCSKEWPSRKF 440
             +   L+ H   HT V P       K    R  L +            C  C K + +   
Sbjct:   649 NSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSYACQECGKAFSTSSG 708

Query:   441 MWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNP-TCEVCGRYHN 499
             +  H IRSHK      C  C K   +   L +HL + H G      + P  C VCG+   
Sbjct:   709 LIAH-IRSHKGEKPFECDHCGKAFASSSYLNVHL-KIHTG------EKPFQCTVCGKTFT 760

Query:   500 ARPKLESHLAVHVGLDKSQTLL--HKCIWTRHIR 531
                 L  H+  H G    Q ++     +W+ ++R
Sbjct:   761 CSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLR 794

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1309670 Zfp236 "zinc finger protein 236" [Rattus norvegicus (taxid:10116)]

 Score = 185 (70.2 bits), Expect = 7.5e-20, Sum P(2) = 7.5e-20
 Identities = 72/273 (26%), Positives = 112/273 (41%)

Query:    63 KHVEEEHPTMQRRYSC----QVDTMEA-IKEHRKTEHAMY-VCDLCPKYYSRSTHLWKHV 116
             +H+ E H    + + C    Q   +E  +  H+ T +A   VC +C K +SR   L  H+
Sbjct:    38 RHMRE-HEQNDKPHRCDQCPQTFNVEFNLTLHKCTHNAEDPVCPVCNKKFSRVASLKAHI 96

Query:   117 NRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQ 176
               +H+   ++ C  C    +    L  H+  H        E   N     VH C  C+K+
Sbjct:    97 -MLHEKEENLICSECGDEFTLHSQLAIHMEEHRQ------ELANNR----VHTCKACKKE 145

Query:   177 FKQNWLLQKHKKT-CKGPKRPTSPLPEP-DEDGI-FRCKKCVKVFVNPDIYKKHLK-HSH 232
             F+ +  L++H KT CK     T       D  G  + C  C K F  P    +H++ H+ 
Sbjct:   146 FETSPELKEHMKTHCKVRASGTRSYNRNIDRSGFTYSCPHCGKTFQKPSQLTRHIRIHTG 205

Query:   233 TKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHC-REH 290
              + + C  C  A  +  K  L  HM  +H   + + C    C   F  K + Q H  R H
Sbjct:   206 ERPFKCSECGKA--FNQKGALQTHM-IKHTGEKPHACAF--CPAAFSQKGNLQSHVQRVH 260

Query:   291 KTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTH 323
               V +  PT  C  C+ +F +   L  H+   H
Sbjct:   261 SEVKNG-PTYNCTECSCVFKSLGSLNTHISKMH 292

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0071333 "cellular response to glucose stimulus" evidence=ISO

UNIPROTKB|Q9UL36 ZNF236 "Zinc finger protein 236" [Homo sapiens (taxid:9606)]

 Score = 174 (66.3 bits), Expect = 7.2e-27, Sum P(3) = 7.2e-27
 Identities = 45/128 (35%), Positives = 67/128 (52%)

Query:   170 CHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLK 229
             C  C K FK++  L++H ++  G K P            ++CK C + FV+  + K H K
Sbjct:   969 CDYCNKGFKKSSHLKQHVRSHTGEK-P------------YKCKLCGRGFVSSGVLKSHEK 1015

Query:   230 -HSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHC 287
              H+  KA+ C VC  +  + T   L  HM T H   + YKC  P C++ FRT + C+KH 
Sbjct:  1016 THTGVKAFSCSVCNAS--FTTNGSLTRHMAT-HMSMKPYKC--PFCEEGFRTTVHCKKHM 1070

Query:   288 REHKTVTS 295
             + H+TV S
Sbjct:  1071 KRHQTVPS 1078

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0071333 "cellular response to glucose stimulus" evidence=IEP

UNIPROTKB|J9JID5 ZNF236 "Zinc finger protein 236" [Homo sapiens (taxid:9606)]

 Score = 174 (66.3 bits), Expect = 7.2e-27, Sum P(3) = 7.2e-27
 Identities = 45/128 (35%), Positives = 67/128 (52%)

Query:   170 CHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLK 229
             C  C K FK++  L++H ++  G K P            ++CK C + FV+  + K H K
Sbjct:   971 CDYCNKGFKKSSHLKQHVRSHTGEK-P------------YKCKLCGRGFVSSGVLKSHEK 1017

Query:   230 -HSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHC 287
              H+  KA+ C VC  +  + T   L  HM T H   + YKC  P C++ FRT + C+KH 
Sbjct:  1018 THTGVKAFSCSVCNAS--FTTNGSLTRHMAT-HMSMKPYKC--PFCEEGFRTTVHCKKHM 1072

Query:   288 REHKTVTS 295
             + H+TV S
Sbjct:  1073 KRHQTVPS 1080

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-110913-157 si:ch211-245n8.1 "si:ch211-245n8.1" [Danio rerio (taxid:7955)]

 Score = 322 (118.4 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 134/546 (24%), Positives = 196/546 (35%)

Query:     5 HKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIIXXXXXXXXXXXXXXKH 64
             H  E  ++C  C K FR + SL KH+   H T ++ ++C                    H
Sbjct:   476 HTGEKPITCTLCGKSFRQSSSLSKHMRT-H-TGEKPFTC-TQCGKSFSQSSNFNLHMRIH 532

Query:    65 VEEEHPTMQRRYSCQVDTMEAIKEHRKTE--HAMYVCDLCPKYYSRSTHLWKHVNRVHKG 122
               E+ P    +         ++ +H +T      + C  C K ++RS+HL +H+ R+H G
Sbjct:   533 TGEK-PFTCTQCGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSHLNQHI-RIHTG 590

Query:   123 HPDVTCRICSKVSSSRGHLEKHLIAH--DNPNT--EVDEP--QMNEF--------GESVH 168
                +TC  C K       L KH+  H  + P T  +  +   Q + F        GE   
Sbjct:   591 EKPITCTQCGKSFRQSSSLYKHMRIHTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKPI 650

Query:   169 ICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHL 228
              C  C K F Q+  L KH +   G K      P       F C +C K F       KH+
Sbjct:   651 TCTQCGKSFHQSSSLYKHMRIHTGEK------P-------FTCTQCGKSFRQASSLNKHM 697

Query:   229 K-HSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKH 286
             + H+  K   C  C     +     L  HM+  H   + + C    C K FR      KH
Sbjct:   698 RIHTGEKPITCTQC--GKSFRQSSSLYKHMRI-HTGEKPFTCT--QCGKSFRQTSSLNKH 752

Query:   287 CREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLK--STHKDLTNCMCSACFVVEDNLSAL 344
              R H   T   P   C  C   F     L  H++  +  K  T   C   F    NL   
Sbjct:   753 MRIH---TGEKPFT-CTQCGISFNCSSYLKQHMRIHTGEKPFTCTQCGRSFNRSSNLD-- 806

Query:   345 EXXXXXXXXXXXXXPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELK 403
                           P+ C  C +       + +HI++H GE  + C +CG  F     L 
Sbjct:   807 ----HHMRIHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTGEKPITCTLCGKSFRQSSSLS 862

Query:   404 VHLEEHT-DVPETKEQKPRP----------------ELPVTCDLCSKEWPSRKFMWQHLI 446
              H+  HT + P T  Q  +                 E P TC  C K +     + +H+ 
Sbjct:   863 KHMRTHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTGEKPFTCTQCGKSFRQASSLNKHM- 921

Query:   447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPT-CEVCGRYHNARPKLE 505
             R+H       C  C K       L  H+ + H G      + P  C  CG+       L 
Sbjct:   922 RTHTGEKPFTCTQCGKSFNRSSHLNQHI-RIHTG------EKPIMCTQCGKSFRQSSSLY 974

Query:   506 SHLAVH 511
              H+ +H
Sbjct:   975 KHMRIH 980

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1MX34 F1MX34 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 321 (118.1 bits), Expect = 9.7e-26, P = 9.7e-26
 Identities = 140/554 (25%), Positives = 196/554 (35%)

Query:     5 HKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIIXXXXXXXXXXXXXXKH 64
             H  E    C  C KVF    +L  H +  H T ++ Y C V                  H
Sbjct:   340 HTGEKPHKCDVCGKVFNQTANLAVH-QRIH-TGEKPYKCNV-----CGKAFNHSANLTVH 392

Query:    65 VEEEHPTMQRRYSCQV-----DTMEAIKEHRK--TEHAMYVCDLCPKYYSRSTHLWKHVN 117
                 H T ++ Y C V     +    ++ H+K  T    Y CD+C K +S++ +L  H  
Sbjct:   393 -RRLH-TGEKPYKCDVCGKAFNQTAKLRLHQKIHTGEKPYKCDVCGKAFSQTANLAVH-Q 449

Query:   118 RVHKGHPDVTCRICSKVSSSRGHLEKHLIAH--DNP--------NTEVDEPQMNEFGESV 167
             RVH G     C +C K  S    L  H   H  + P           +   +    GE  
Sbjct:   450 RVHTGEKPYKCNVCDKAFSDTSSLTVHRRVHTGEKPYKCDICVVTASLAVHRRIHTGEKP 509

Query:   168 HICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKH 227
             + C +C K F     LQ H++   G K        P     ++C  C + F +      H
Sbjct:   510 YKCDVCGKAFNHTTRLQLHQRIHTGEK--------P-----YKCNVCERAFSHTSSLSVH 556

Query:   228 LK-HSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQK 285
              + H+  K Y C++C  A  +     L  H ++ H   + YKC +  C K F      + 
Sbjct:   557 RRLHTGVKPYKCDICGRA--FSQTASLALH-RSIHTGEKPYKCDV--CGKAFNQTAKLRL 611

Query:   286 HCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLK-STHKDLTNC-MCSACFVVEDNL-- 341
             H R H   T   P   C  C   F++   L LH +  T +    C +C   F    NL  
Sbjct:   612 HRRIH---TGEKPYKCC-VCGKAFSHTTGLELHQRIHTGEKPYKCNVCDKAFSHSSNLTV 667

Query:   342 --------------------SALEXXXXXXXXXXXXXPYACRICARLLGNGVKVSEHIKL 381
                                 S                PY C  C +      K+  H K+
Sbjct:   668 HRRLHAGEKPYKCDICGKGFSVSSSLAVHQRVHTGEKPYKCDTCGKAFNQTAKLGLHQKI 727

Query:   382 H-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKF 440
             H GE    C VCG  F     L VH   HT            E P  CD+C K +     
Sbjct:   728 HTGEKSYKCDVCGKAFSRTGNLTVHRRVHTG-----------EKPYKCDMCGKAFRVSSN 776

Query:   441 MWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNP-TCEVCGRYHN 499
             +  H  R H       C VC K       LA+H  + H G      + P  C+VCG+  N
Sbjct:   777 LAVHQ-RVHTGEKPYKCDVCGKAFSQATGLAVH-QRIHTG------EKPYKCDVCGKAFN 828

Query:   500 ARPKLESHLAVHVG 513
                +L+ H  +H G
Sbjct:   829 HTTRLQLHQRIHTG 842

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-148 si:dkey-14o6.6 "si:dkey-14o6.6" [Danio rerio (taxid:7955)]

 Score = 320 (117.7 bits), Expect = 1.2e-25, P = 1.2e-25
 Identities = 137/557 (24%), Positives = 210/557 (37%)

Query:     5 HKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIIXXXXXXXXXXXXXXKH 64
             H  E   +C  C K F  + +L KH+ ++  T ++ ++C                    H
Sbjct:   448 HTGEKPFTCTQCGKRFNRSANLNKHIHKKIHTGKKTFTC-TQCGKSFNCSSHLNQHIRIH 506

Query:    65 V-EEEHPTMQ--RRYSCQVDTMEAIKEHRKTEHAMYVCDLCPKYYSRSTHLWKHVNRVHK 121
               E+     Q  + ++C     E +  H  T    + C  C K +S+S+ L++H+ ++H 
Sbjct:   507 TGEKPFRCTQCGKSFNCSSHLNEHMMIH--TGEKPFTCTQCGKSFSKSSSLYRHM-KIHT 563

Query:   122 GHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGES--------VHI---- 169
             G    TC  C K  S    L  H+  H            N F +S        +H     
Sbjct:   564 GEKPYTCTECRKSFSQSSSLNLHMRIHTGEKPFTCTECGNSFSKSSSLYRHMKIHTGEKP 623

Query:   170 --CHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKH 227
               C  C K F Q+  L  H +   G K      P       F C +C K F++     +H
Sbjct:   624 FTCTECGKSFIQSSCLNVHMRIHTGEK------P-------FTCTQCGKSFIHSSHLNQH 670

Query:   228 LK-HSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQK 285
             L  H+  K + C  C     +     L  HMK  H    EY CL   C+K F T  + ++
Sbjct:   671 LMIHTGEKPFKCPQC--GKSFSQSY-LKKHMKI-HTGVREYMCL--ECEKTFITAAELKR 724

Query:   286 HCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLK-STHKDL---TNCMCSACFVVEDNL 341
             H R H   T   P   C+ C+  F +   L  H +  T + L   ++C C   F    N+
Sbjct:   725 HKRIH---TGEKPYK-CSQCSKRFAHSGTLKTHERIHTGEKLYKCSHCNCGKSFNQSSNI 780

Query:   342 SALEXXXXXXXXXXXXXPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEP 400
             +                P+ C  C +       +++H+++H GE    C  CG  F    
Sbjct:   781 NL------HMRIHTGEKPFTCTQCRKSFSLLSSLNQHMRIHTGEKPFTCTQCGKSFSLSS 834

Query:   401 ELKVHLEEHT-DVPETKEQKPRP----------------ELPVTCDLCSKEWPSRKFMWQ 443
              L  H+  HT + P T  Q  +                 E P TC  C K +     ++ 
Sbjct:   835 SLNRHMRIHTGEKPFTCTQCGKSFSLSSSFNQHMRMHTGEKPFTCTQCGKSFSQSSHLYN 894

Query:   444 HLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNP-TCEVCGRYHNARP 502
             H+ R H       C  C K S +Y +   H  + H G      + P TC  CG+  N   
Sbjct:   895 HM-RIHTGEKPFICTQCGK-SFSYSSHLNHHMRIHTG------EKPFTCTQCGKSFNCSS 946

Query:   503 KLESHLAVHVGLDKSQT 519
             +L  H+ +H G +KS T
Sbjct:   947 QLNQHMRIHTG-EKSFT 962

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	537
KOG3608|consensus	467		99.96
KOG3608|consensus	467		99.96
KOG1074|consensus	958		99.93
KOG2462|consensus	279		99.93
KOG2462|consensus	279		99.92
KOG1074|consensus	958		99.91
KOG3623|consensus	1007		99.88
KOG3623|consensus	1007		99.87
KOG3576|consensus	267		99.65
KOG3576|consensus	267		99.64
PLN03086	567	PRLI-interacting factor K; Provisional	99.21
PLN03086	567	PRLI-interacting factor K; Provisional	99.16
PHA00733	128	hypothetical protein	98.96
PHA00733	128	hypothetical protein	98.94
KOG3993|consensus	500		98.87
KOG1146|consensus	1406		98.86
KOG3993|consensus	500		98.69
PHA02768	55	hypothetical protein; Provisional	98.63
PHA02768	55	hypothetical protein; Provisional	98.56
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.32
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.23
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.22
PHA00616	44	hypothetical protein	98.19
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.13
PHA00732	79	hypothetical protein	98.12
PHA00732	79	hypothetical protein	98.08
PHA00616	44	hypothetical protein	98.06
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.88
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.69
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.63
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.57
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.56
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.45
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.43
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.43
KOG2231|consensus	669		97.35
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.32
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.27
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.27
KOG1146|consensus	1406		97.26
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.21
KOG2231|consensus	669		97.12
COG5236	493	Uncharacterized conserved protein, contains RING Z	97.09
smart00355	26	ZnF_C2H2 zinc finger.	96.93
KOG2785|consensus	390		96.84
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.63
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.6
KOG2482|consensus	423		96.51
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.49
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.41
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.35
smart00355	26	ZnF_C2H2 zinc finger.	96.23
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.23
KOG2482|consensus	423		95.89
KOG4173|consensus	253		95.62
KOG2785|consensus	390		95.59
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.39
PRK04860	160	hypothetical protein; Provisional	94.21
PRK04860	160	hypothetical protein; Provisional	93.25
COG4049	65	Uncharacterized protein containing archaeal-type C	93.25
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.03
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.03
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.74
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.22
KOG4173|consensus	253		92.15
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.99
KOG2893|consensus	341		89.74
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	88.86
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	87.95
KOG2893|consensus	341		87.27
COG5048	467	FOG: Zn-finger [General function prediction only]	86.35
COG4049	65	Uncharacterized protein containing archaeal-type C	86.17
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.79
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.38
COG5048	467	FOG: Zn-finger [General function prediction only]	80.57

>KOG3608|consensus

Probab=99.96  E-value=7.7e-29  Score=217.20  Aligned_cols=282  Identities=19%  Similarity=0.389  Sum_probs=227.4

Q ss_pred             cccccc--chhccCC-HHHHHHHHHhccCcc--------------ccccccCCCCcccHHHHhhhhhhccCCCCCccccc
Q psy12165        208 IFRCKK--CVKVFVN-PDIYKKHLKHSHTKA--------------YCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLI  270 (537)
Q Consensus       208 ~~~C~~--C~~~f~~-~~~l~~H~~~~h~~~--------------~c~~c~~~~~~~~~~~l~~H~~~~h~~~~~~~C~~  270 (537)
                      .+.|..  |++...+ ..+|.+|.-.|--..              .-..|...  |.....+       -.....|.|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~--f~~~~~i-------p~~g~~f~C~W  139 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAP--FRLMEKI-------PALGQNFRCGW  139 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCC--cchhhcc-------ccchhhhccCh
Confidence            577754  8888777 588999875442100              01112111  2221111       11234489999


Q ss_pred             ccccccccCHHHHHHHHHhcccc--------CC-CCCCcccc--cchhcccCcHHHHHHHhhcCCCCCccccCCcccccC
Q psy12165        271 PGCKKYFRTKLDCQKHCREHKTV--------TS-RCPTNYCN--FCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVED  339 (537)
Q Consensus       271 ~~C~~~f~~~~~l~~H~~~h~~~--------~~-~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~  339 (537)
                      +.|+..|.+..++..|+..|..-        .. ..+.+.|.  .|...+.++++|++|++ +|++++...|+.|+..|+
T Consensus       140 edCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r-~Hs~eKvvACp~Cg~~F~  218 (467)
T KOG3608|consen  140 EDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIR-THSNEKVVACPHCGELFR  218 (467)
T ss_pred             hhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHH-hcCCCeEEecchHHHHhc
Confidence            99999999999999998877422        01 11456785  69999999999999999 899999999999999999


Q ss_pred             CHHHHHHHHHhhccccCCCccccccccccccChhHHHHhHhhhcCCccccccccccCCChHHHHHHHHhccCCCCCccCC
Q psy12165        340 NLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQK  419 (537)
Q Consensus       340 ~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~  419 (537)
                      +...|..|+++.... ...+|.|..|.+.|+++..|..|+..|-. -|+|+.|+......++|.+||+.-+..       
T Consensus       219 ~~tkl~DH~rRqt~l-~~n~fqC~~C~KrFaTeklL~~Hv~rHvn-~ykCplCdmtc~~~ssL~~H~r~rHs~-------  289 (467)
T KOG3608|consen  219 TKTKLFDHLRRQTEL-NTNSFQCAQCFKRFATEKLLKSHVVRHVN-CYKCPLCDMTCSSASSLTTHIRYRHSK-------  289 (467)
T ss_pred             cccHHHHHHHhhhhh-cCCchHHHHHHHHHhHHHHHHHHHHHhhh-cccccccccCCCChHHHHHHHHhhhcc-------
Confidence            999999999975543 35799999999999999999999999832 589999999999999999999965443       


Q ss_pred             CCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccc--cccccCCHHHHHHHHHhhCCCCcccccCCccccccccc
Q psy12165        420 PRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGV--CLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRY  497 (537)
Q Consensus       420 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~  497 (537)
                         .+||+|+.|++.|.+.++|.+|+ .+|+ +..|+|..  |.+++.+...|++|++.+|.|   ...-+|.|-.|++.
T Consensus       290 ---dkpfKCd~Cd~~c~~esdL~kH~-~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg---~np~~Y~CH~Cdr~  361 (467)
T KOG3608|consen  290 ---DKPFKCDECDTRCVRESDLAKHV-QVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEG---NNPILYACHCCDRF  361 (467)
T ss_pred             ---CCCccccchhhhhccHHHHHHHH-Hhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccC---CCCCceeeecchhh
Confidence               78999999999999999999998 6998 77899999  999999999999999999976   23467999999999


Q ss_pred             ccChhHHHHHHhhhhCCCc
Q psy12165        498 HNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       498 f~~~~~l~~H~~~h~g~~~  516 (537)
                      |++..+|..|++.-+|.+.
T Consensus       362 ft~G~~L~~HL~kkH~f~~  380 (467)
T KOG3608|consen  362 FTSGKSLSAHLMKKHGFRL  380 (467)
T ss_pred             hccchhHHHHHHHhhcccC
Confidence            9999999999877776543

>KOG3608|consensus

Probab=99.96  E-value=1.3e-28  Score=215.71  Aligned_cols=298  Identities=21%  Similarity=0.360  Sum_probs=240.2

Q ss_pred             eeeccc--chhhccC-hHHHHHHHhhcCCCC----------------CCC-----CCCCCCCCCCccccc--cchhccCC
Q psy12165        167 VHICHL--CQKQFKQ-NWLLQKHKKTCKGPK----------------RPT-----SPLPEPDEDGIFRCK--KCVKVFVN  220 (537)
Q Consensus       167 ~~~C~~--C~~~f~~-~~~l~~H~~~h~~~~----------------~~~-----~~~~~~~~~~~~~C~--~C~~~f~~  220 (537)
                      .++|..  |++...+ ...|.+|...|.-..                .+-     .-...+.....|.|.  .|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            577864  8887777 589999988873110                000     001123444567885  59999999


Q ss_pred             HHHHHHHHHhccCccccccccCCCCcccHHHHhhhhhhccCCC-CCcccccccccccccCHHHHHHHHHhccccCCCCCC
Q psy12165        221 PDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDN-EEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPT  299 (537)
Q Consensus       221 ~~~l~~H~~~~h~~~~c~~c~~~~~~~~~~~l~~H~~~~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  299 (537)
                      ..++..|+-.|...  |++           +    +...-..+ ..+.|.+..|-..+.++..|+.|++.|++++    .
T Consensus       149 ~~ef~dHV~~H~l~--cey-----------d----~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eK----v  207 (467)
T KOG3608|consen  149 IVEFQDHVVKHALF--CEY-----------D----IQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEK----V  207 (467)
T ss_pred             HHHHHHHHHHhhhh--hhh-----------h----hhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCe----E
Confidence            99999998755421  100           0    11111222 3578999999999999999999999999886    8


Q ss_pred             cccccchhcccCcHHHHHHHhhcC-CCCCccccCCcccccCCHHHHHHHHHhhccccCCCccccccccccccChhHHHHh
Q psy12165        300 NYCNFCADLFTNRKKLWLHLKSTH-KDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEH  378 (537)
Q Consensus       300 ~~C~~C~~~f~~~~~l~~H~~~~H-~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H  378 (537)
                      ..|+.|+..|.++..|.-|++..- .+..+|.|..|.+.|.+...|..|+..+-     .-|+|+.|..+...+++|..|
T Consensus       208 vACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv-----n~ykCplCdmtc~~~ssL~~H  282 (467)
T KOG3608|consen  208 VACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV-----NCYKCPLCDMTCSSASSLTTH  282 (467)
T ss_pred             EecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh-----hcccccccccCCCChHHHHHH
Confidence            889999999999999999998433 24558999999999999999999999754     559999999999999999999


Q ss_pred             Hh-hh-cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCC--CCCCCCChHHHHHHHHhhcCCC--
Q psy12165        379 IK-LH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDL--CSKEWPSRKFMWQHLIRSHKAV--  452 (537)
Q Consensus       379 ~~-~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~--  452 (537)
                      ++ .| ..+||+|+.|++.|.+.+.|.+|+..|..            ..|+|+.  |.+++.+...|++|++.+|.|.  
T Consensus       283 ~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~------------~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np  350 (467)
T KOG3608|consen  283 IRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSK------------TVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNP  350 (467)
T ss_pred             HHhhhccCCCccccchhhhhccHHHHHHHHHhccc------------cceecCCCCCcHHHHHHHHHHHHHHHhccCCCC
Confidence            99 67 88999999999999999999999998885            4799999  9999999999999999999654  


Q ss_pred             CcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChh
Q psy12165        453 AGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARP  502 (537)
Q Consensus       453 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~  502 (537)
                      .+|.|..|++.|++..+|.+|+++.|.-..+.+-+.|.=.+|.-.|.+..
T Consensus       351 ~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~mRLq  400 (467)
T KOG3608|consen  351 ILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGFMRLQ  400 (467)
T ss_pred             CceeeecchhhhccchhHHHHHHHhhcccCCCCCCceeeeeccCceeeee
Confidence            45999999999999999999999999887777777888778877776543

>KOG1074|consensus

Probab=99.93  E-value=3.5e-26  Score=222.60  Aligned_cols=241  Identities=21%  Similarity=0.349  Sum_probs=156.6

Q ss_pred             CCCcccccccccccccCHHHHHHHHHhccccCCCCCCcccccchhcccCcHHHHHHHhhcCCCCC----ccccC---Ccc
Q psy12165        263 NEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLT----NCMCS---ACF  335 (537)
Q Consensus       263 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~----~~~C~---~C~  335 (537)
                      ..+.+|-+  |.++.+-.+.|+.|.+.|.|+.    +|+|.+|++.|.++.+|+.||- +|....    .+.|+   +|.
T Consensus       603 TdPNqCii--C~rVlSC~saLqmHyrtHtGER----PFkCKiCgRAFtTkGNLkaH~~-vHka~p~~R~q~ScP~~~ic~  675 (958)
T KOG1074|consen  603 TDPNQCII--CLRVLSCPSALQMHYRTHTGER----PFKCKICGRAFTTKGNLKAHMS-VHKAKPPARVQFSCPSTFICQ  675 (958)
T ss_pred             CCccceee--eeecccchhhhhhhhhcccCcC----ccccccccchhccccchhhccc-ccccCccccccccCCchhhhc
Confidence            34677877  8888888888888888888875    8888888888888888888887 665543    35677   777


Q ss_pred             cccCCHHHHHHHHHhhccccC----------CCccccccccccccChhHHHHhHhhh-c----------------CC---
Q psy12165        336 VVEDNLSALEAHVAAKHKAII----------KKPYACRICARLLGNGVKVSEHIKLH-G----------------EH---  385 (537)
Q Consensus       336 ~~~~~~~~l~~H~~~~h~~~~----------~~~~~C~~C~~~f~~~~~l~~H~~~H-~----------------~~---  385 (537)
                      ..|.+.-.|..|++.|-...+          ...-+|..|.+.|.....+..++..| +                +.   
T Consensus       676 ~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~t  755 (958)
T KOG1074|consen  676 KKFTNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVT  755 (958)
T ss_pred             ccccccccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccC
Confidence            777777777777776442211          11245777777776666666665544 1                11   


Q ss_pred             -ccccccccccCCChHHHHHHHHhccCCCC------------CccCCCCCCCCc-ccCCCCCCCCChHHHHHHHHh----
Q psy12165        386 -LVNCRVCGSIFHSEPELKVHLEEHTDVPE------------TKEQKPRPELPV-TCDLCSKEWPSRKFMWQHLIR----  447 (537)
Q Consensus       386 -~~~C~~C~~~f~~~~~L~~H~~~h~~~~~------------~~~~~~~~~~~~-~C~~C~~~f~~~~~l~~H~~~----  447 (537)
                       +..+..|+..+.....+..+-..+.....            ........+++. .+..++......-.+.--+..    
T Consensus       756 p~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~  835 (958)
T KOG1074|consen  756 PPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETS  835 (958)
T ss_pred             CCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccc
Confidence             34566677776666666665332210000            011112334444 555555433222111100000    


Q ss_pred             -------------hcCC------------------------CCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcc
Q psy12165        448 -------------SHKA------------------------VAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPT  490 (537)
Q Consensus       448 -------------~H~~------------------------~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~  490 (537)
                                   .+.+                        .....|.+|++.|.+..+|+.|++ .|++     ++||.
T Consensus       836 ~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~r-THtg-----~KPF~  909 (958)
T KOG1074|consen  836 MLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMR-THTG-----PKPFF  909 (958)
T ss_pred             ccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhh-cCCC-----CCCcc
Confidence                         0000                        012679999999999999999999 8988     89999


Q ss_pred             cccccccccChhHHHHHHhhhhCCCc
Q psy12165        491 CEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       491 C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      |.+|++.|+.+.+|+.||.+|....+
T Consensus       910 C~fC~~aFttrgnLKvHMgtH~w~q~  935 (958)
T KOG1074|consen  910 CHFCEEAFTTRGNLKVHMGTHMWVQP  935 (958)
T ss_pred             chhhhhhhhhhhhhhhhhccccccCC
Confidence            99999999999999999999998654

>KOG2462|consensus

Probab=99.93  E-value=2.1e-26  Score=197.48  Aligned_cols=133  Identities=26%  Similarity=0.607  Sum_probs=113.4

Q ss_pred             CCccccccccccccChhHHHHhHhhh----cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCC
Q psy12165        357 KKPYACRICARLLGNGVKVSEHIKLH----GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCS  432 (537)
Q Consensus       357 ~~~~~C~~C~~~f~~~~~l~~H~~~H----~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~  432 (537)
                      ...|+|+.|++.+.+.++|.+|.++|    ..+.+.|.+||+.|.+...|+.|+++|+-             +++|.+||
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l-------------~c~C~iCG  194 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL-------------PCECGICG  194 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCC-------------Cccccccc
Confidence            45688888888888888888888888    56678888888888888888888888886             78888888


Q ss_pred             CCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHh
Q psy12165        433 KEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLA  509 (537)
Q Consensus       433 ~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  509 (537)
                      +.|.....|+-|+ +.|+||+||.|+.|++.|..+.+|+.||. .|++     .++|+|..|++.|..++-|..|..
T Consensus       195 KaFSRPWLLQGHi-RTHTGEKPF~C~hC~kAFADRSNLRAHmQ-THS~-----~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  195 KAFSRPWLLQGHI-RTHTGEKPFSCPHCGKAFADRSNLRAHMQ-THSD-----VKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             ccccchHHhhccc-ccccCCCCccCCcccchhcchHHHHHHHH-hhcC-----CccccCcchhhHHHHHHHHHHhhh
Confidence            8888888888887 88888888888888888888888888887 7777     788888888888888888888864

>KOG2462|consensus

Probab=99.92  E-value=8.9e-26  Score=193.67  Aligned_cols=138  Identities=27%  Similarity=0.515  Sum_probs=106.5

Q ss_pred             CCcccccchhcccCcHHHHHHHhhcCCCCCccccCCcccccCCHHHHHHHHHhhccccCCCccccccccccccChhHHHH
Q psy12165        298 PTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSE  377 (537)
Q Consensus       298 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~  377 (537)
                      ..|+|+.|++.+.+.++|.+|.+ .|..                            ....+.+.|++|++++.+-..|..
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ-~H~~----------------------------~~s~ka~~C~~C~K~YvSmpALkM  179 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQ-THRS----------------------------LDSKKAFSCKYCGKVYVSMPALKM  179 (279)
T ss_pred             Cceeccccccccccccccchhhc-cccc----------------------------ccccccccCCCCCceeeehHHHhh
Confidence            36777777777777777777776 4433                            222577788888888888888888


Q ss_pred             hHhhhcCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        378 HIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       378 H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      |+++|. -+.+|.+||+.|.....|+-|+|+|+|           |+||.|+.|+++|.++++|+.|+ .+|.+.++|.|
T Consensus       180 HirTH~-l~c~C~iCGKaFSRPWLLQGHiRTHTG-----------EKPF~C~hC~kAFADRSNLRAHm-QTHS~~K~~qC  246 (279)
T KOG2462|consen  180 HIRTHT-LPCECGICGKAFSRPWLLQGHIRTHTG-----------EKPFSCPHCGKAFADRSNLRAHM-QTHSDVKKHQC  246 (279)
T ss_pred             HhhccC-CCcccccccccccchHHhhcccccccC-----------CCCccCCcccchhcchHHHHHHH-HhhcCCccccC
Confidence            888875 467788888888888888888888888           77888888888888888888887 78888888888


Q ss_pred             cccccccCCHHHHHHHHHhh
Q psy12165        458 GVCLKISETYEALALHLDQA  477 (537)
Q Consensus       458 ~~C~~~f~~~~~l~~H~~~~  477 (537)
                      ..|+++|..+.-|.+|...-
T Consensus       247 ~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  247 PRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             cchhhHHHHHHHHHHhhhhc
Confidence            88888888888888887643

>KOG1074|consensus

Probab=99.91  E-value=5.8e-25  Score=214.12  Aligned_cols=124  Identities=22%  Similarity=0.464  Sum_probs=102.2

Q ss_pred             cccCCCcCcCCChHHHHHHHHhhcCCCCCccccccCCcccChHHHHHHHHhcCCCCCCCCccccccCCCceeecc---cc
Q psy12165         97 YVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICH---LC  173 (537)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~C~---~C  173 (537)
                      -.|-+|.++..-.++|+.|+ +.|+|++||+|.+|++.|.++.+|+.||-.|....          .-+..+.|+   +|
T Consensus       606 NqCiiC~rVlSC~saLqmHy-rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p----------~~R~q~ScP~~~ic  674 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHY-RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKP----------PARVQFSCPSTFIC  674 (958)
T ss_pred             cceeeeeecccchhhhhhhh-hcccCcCccccccccchhccccchhhcccccccCc----------cccccccCCchhhh
Confidence            58999999999999999999 78999999999999999999999999999986321          134679999   99


Q ss_pred             hhhccChHHHHHHHhhcCCCCCCCCCCCCCCCCCccccccchhccCCHHHHHHHHHhc
Q psy12165        174 QKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHS  231 (537)
Q Consensus       174 ~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  231 (537)
                      -+.|.+...|..|+++|.+...+....+.......-+|..|.+.|.+...+..++-.+
T Consensus       675 ~~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~  732 (958)
T KOG1074|consen  675 QKKFTNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQ  732 (958)
T ss_pred             cccccccccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhcc
Confidence            9999999999999999996554433332222222357999999999999888887654

>KOG3623|consensus

Probab=99.88  E-value=2.1e-23  Score=199.62  Aligned_cols=120  Identities=28%  Similarity=0.530  Sum_probs=102.0

Q ss_pred             ccccCCCcCcCCChHHHHHHHHhhcCC-CCCccccccCCcccChHHHHHHHHhcCCCCCCCCccccccCCCceeecccch
Q psy12165         96 MYVCDLCPKYYSRSTHLWKHVNRVHKG-HPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQ  174 (537)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~H~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~C~~C~  174 (537)
                      ..+|++|+..+.....|+.|++-.|-. +..|.|..|.+.|..+..|.+||.+|....... .........+.|+|..|+
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa-~sltqsa~lRKFKCtECg  288 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQA-ISLTQSALLRKFKCTECG  288 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCccc-ccccchhhhccccccccc
Confidence            368999999999999999999877754 567999999999999999999999996432211 111122356789999999


Q ss_pred             hhccChHHHHHHHhhcCCCCCCCCCCCCCCCCCccccccchhccCCHHHHHHHHH
Q psy12165        175 KQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLK  229 (537)
Q Consensus       175 ~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  229 (537)
                      +.|+.+..|+.|+++|.|++             ||.|+.|++.|+....+-.||-
T Consensus       289 KAFKfKHHLKEHlRIHSGEK-------------PfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHLRIHSGEK-------------PFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhhHHHHHhhheeecCCC-------------CcCCcccccccccCCccccccc
Confidence            99999999999999999999             8999999999999999999974

>KOG3623|consensus

Probab=99.87  E-value=5.4e-23  Score=196.90  Aligned_cols=108  Identities=21%  Similarity=0.453  Sum_probs=85.8

Q ss_pred             CcccccccccccccCHHHHHHHHHhccccCCCCCCcccccchhcccCcHHHHHHHhhcCCC-------------CCcccc
Q psy12165        265 EYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKD-------------LTNCMC  331 (537)
Q Consensus       265 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~-------------~~~~~C  331 (537)
                      ..+|.+  |++.+.....|..|+...+....  +.|-|.+|.++|..+..|.+||. .|..             .+.|+|
T Consensus       210 lltcpy--cdrgykrltslkeHikyrhekne--~nfsC~lCsytFAyRtQLErhm~-~hkpg~dqa~sltqsa~lRKFKC  284 (1007)
T KOG3623|consen  210 LLTCPY--CDRGYKRLTSLKEHIKYRHEKNE--PNFSCMLCSYTFAYRTQLERHMQ-LHKPGGDQAISLTQSALLRKFKC  284 (1007)
T ss_pred             hhcchh--HHHHHHHHHHHHHHHHHHHhhCC--CCCcchhhhhhhhhHHHHHHHHH-hhcCCCcccccccchhhhccccc
Confidence            467865  99999999999999877654432  47889999999999999999998 4431             345889


Q ss_pred             CCcccccCCHHHHHHHHHhhccccCCCccccccccccccChhHHHHhHh
Q psy12165        332 SACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIK  380 (537)
Q Consensus       332 ~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~  380 (537)
                      .+|++.|+.+-.|++|+++|.+   +|||.|+.|++.|....++..||.
T Consensus       285 tECgKAFKfKHHLKEHlRIHSG---EKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  285 TECGKAFKFKHHLKEHLRIHSG---EKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             cccchhhhhHHHHHhhheeecC---CCCcCCcccccccccCCccccccc
Confidence            9999999988889999887554   688999999999988888888863

>KOG3576|consensus

Probab=99.65  E-value=4.2e-17  Score=132.58  Aligned_cols=112  Identities=31%  Similarity=0.564  Sum_probs=75.0

Q ss_pred             CCccccccccccccChhHHHHhHhhh-cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCC
Q psy12165        357 KKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEW  435 (537)
Q Consensus       357 ~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f  435 (537)
                      ...|.|.+|++.|.....|.+|++.| ..+.+-|..||+.|.+.-.|++|+++|++           .+||+|..|+++|
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtg-----------vrpykc~~c~kaf  183 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTG-----------VRPYKCSLCEKAF  183 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccC-----------ccccchhhhhHHH
Confidence            35577777777777777777777777 55667777777777777777777777777           5677777777777


Q ss_pred             CChHHHHHHHHhhcCCC----------CcccccccccccCCHHHHHHHHHhhCC
Q psy12165        436 PSRKFMWQHLIRSHKAV----------AGLACGVCLKISETYEALALHLDQAHP  479 (537)
Q Consensus       436 ~~~~~l~~H~~~~H~~~----------~~~~C~~C~~~f~~~~~l~~H~~~~H~  479 (537)
                      +.+..|..|++++|...          +.|.|+.||+.-.....+..|+..+|+
T Consensus       184 tqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  184 TQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            77777777777777532          234455555555555555555554443

>KOG3576|consensus

Probab=99.64  E-value=4.9e-17  Score=132.15  Aligned_cols=120  Identities=27%  Similarity=0.438  Sum_probs=109.0

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccccc
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLK  462 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  462 (537)
                      +...|.|.+|++.|.....|.+|++-|.+           .+.+-|..||+.|...-+|.+|+ +.|+|.+||+|..|++
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~-----------vkr~lct~cgkgfndtfdlkrh~-rthtgvrpykc~~c~k  181 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSD-----------VKRHLCTFCGKGFNDTFDLKRHT-RTHTGVRPYKCSLCEK  181 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccH-----------HHHHHHhhccCcccchhhhhhhh-ccccCccccchhhhhH
Confidence            45579999999999999999999999998           67899999999999999999998 9999999999999999


Q ss_pred             ccCCHHHHHHHHHhhCCCCc-----ccccCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        463 ISETYEALALHLDQAHPGYF-----AEEVDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       463 ~f~~~~~l~~H~~~~H~~~~-----~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      .|+..-.|..|++.+|+...     .-..+.|.|+.||+.-.....+..|++.|+-.
T Consensus       182 aftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  182 AFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            99999999999999998621     11347799999999999999999999999864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.21  E-value=4.5e-11  Score=117.28  Aligned_cols=145  Identities=21%  Similarity=0.444  Sum_probs=95.4

Q ss_pred             cccCCcccccCCHHHHHHHHHhhccccCCCcccccc--ccccccChhHHHHhHhhhcCCccccccccccCCChHHHHHHH
Q psy12165        329 CMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRI--CARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHL  406 (537)
Q Consensus       329 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~  406 (537)
                      ..|+.|..... ...|..|....-.    ..-.|+.  |+..|. +..+..|        +.|+.|+..|. ...|..|+
T Consensus       408 V~C~NC~~~i~-l~~l~lHe~~C~r----~~V~Cp~~~Cg~v~~-r~el~~H--------~~C~~Cgk~f~-~s~LekH~  472 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHEAYCSR----HNVVCPHDGCGIVLR-VEEAKNH--------VHCEKCGQAFQ-QGEMEKHM  472 (567)
T ss_pred             EECCCCCCccc-hhHHHHHHhhCCC----cceeCCcccccceee-ccccccC--------ccCCCCCCccc-hHHHHHHH
Confidence            34555554433 2333355443221    2335763  777773 3334444        57888888885 57788888


Q ss_pred             HhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccC----------CHHHHHHHHHh
Q psy12165        407 EEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISE----------TYEALALHLDQ  476 (537)
Q Consensus       407 ~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~----------~~~~l~~H~~~  476 (537)
                      ++++.             ++.|+ |++.+ .+..|..|+ ..|...+++.|.+|++.+.          ....|..|.. 
T Consensus       473 ~~~Hk-------------pv~Cp-Cg~~~-~R~~L~~H~-~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~-  535 (567)
T PLN03086        473 KVFHE-------------PLQCP-CGVVL-EKEQMVQHQ-ASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHES-  535 (567)
T ss_pred             HhcCC-------------CccCC-CCCCc-chhHHHhhh-hccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHH-
Confidence            88764             68888 88655 668888886 7788888888888888874          2347888877 


Q ss_pred             hCCCCcccccCCcccccccccccChhHHHHHHhhhh
Q psy12165        477 AHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       477 ~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      .++      .+++.|..|++.+..+ .|..|+...|
T Consensus       536 ~CG------~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        536 ICG------SRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             hcC------CcceEccccCCeeeeh-hHHHHHHHhh
Confidence            343      5888888888887544 4888875544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.16  E-value=1e-10  Score=114.84  Aligned_cols=146  Identities=18%  Similarity=0.368  Sum_probs=113.1

Q ss_pred             cccccchhcccCcHHHHHHHhhcCCCCCccccCC--cccccCCHHHHHHHHHhhccccCCCccccccccccccChhHHHH
Q psy12165        300 NYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSA--CFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSE  377 (537)
Q Consensus       300 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~  377 (537)
                      -.|+.|...... ..|..|..  +..-....|+.  |+..|.. ..+            ++.+.|+.|++.|. ...|..
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~--~C~r~~V~Cp~~~Cg~v~~r-~el------------~~H~~C~~Cgk~f~-~s~Lek  470 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEA--YCSRHNVVCPHDGCGIVLRV-EEA------------KNHVHCEKCGQAFQ-QGEMEK  470 (567)
T ss_pred             EECCCCCCccch-hHHHHHHh--hCCCcceeCCcccccceeec-ccc------------ccCccCCCCCCccc-hHHHHH
Confidence            369999888774 45668874  45556667884  8888732 222            45678999999996 678999


Q ss_pred             hHhhhcCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCC----------ChHHHHHHHHh
Q psy12165        378 HIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWP----------SRKFMWQHLIR  447 (537)
Q Consensus       378 H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~----------~~~~l~~H~~~  447 (537)
                      |+.++ ..++.|+ ||..+ .+..|..|+.+|.+           ++++.|+.|++.|.          ....|..|. .
T Consensus       471 H~~~~-Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp-----------~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE-~  535 (567)
T PLN03086        471 HMKVF-HEPLQCP-CGVVL-EKEQMVQHQASTCP-----------LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHE-S  535 (567)
T ss_pred             HHHhc-CCCccCC-CCCCc-chhHHHhhhhccCC-----------CCceeCCCCCCccccCccccchhhhhhhHHHHH-H
Confidence            99987 3789999 99754 67899999988888           78999999999885          245799997 4


Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCC
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHP  479 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  479 (537)
                      .. +.+++.|..|++.+. ..+|..|+..+|.
T Consensus       536 ~C-G~rt~~C~~Cgk~Vr-lrdm~~H~~~~h~  565 (567)
T PLN03086        536 IC-GSRTAPCDSCGRSVM-LKEMDIHQIAVHQ  565 (567)
T ss_pred             hc-CCcceEccccCCeee-ehhHHHHHHHhhc
Confidence            44 889999999998876 5678899988884

>PHA00733 hypothetical protein

Probab=98.96  E-value=1.5e-09  Score=86.47  Aligned_cols=80  Identities=21%  Similarity=0.358  Sum_probs=49.3

Q ss_pred             CCccccccccccccChhHHHHh------HhhhcCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCC
Q psy12165        357 KKPYACRICARLLGNGVKVSEH------IKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDL  430 (537)
Q Consensus       357 ~~~~~C~~C~~~f~~~~~l~~H------~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~  430 (537)
                      .+++.|.+|...|.....|..+      +..++.+||.|+.||+.|.....|..|++.+..             +|.|+.
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~-------------~~~C~~  104 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEH-------------SKVCPV  104 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCCc-------------CccCCC
Confidence            4566677766666655444443      223356667777777777777777777665422             466777


Q ss_pred             CCCCCCChHHHHHHHHhhc
Q psy12165        431 CSKEWPSRKFMWQHLIRSH  449 (537)
Q Consensus       431 C~~~f~~~~~l~~H~~~~H  449 (537)
                      |++.|.....|..|+...|
T Consensus       105 CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733        105 CGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCccCCHHHHHHHHHHhc
Confidence            7777766666666665555

>PHA00733 hypothetical protein

Probab=98.94  E-value=8.7e-10  Score=87.83  Aligned_cols=55  Identities=20%  Similarity=0.399  Sum_probs=26.7

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        452 VAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       452 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      .+||.|+.|++.|.+...|..|++ .|       ..+|.|+.|+++|.....|..|++..+|+
T Consensus        71 ~kPy~C~~Cgk~Fss~s~L~~H~r-~h-------~~~~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733         71 VSPYVCPLCLMPFSSSVSLKQHIR-YT-------EHSKVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CCCccCCCCCCcCCCHHHHHHHHh-cC-------CcCccCCCCCCccCCHHHHHHHHHHhcCc
Confidence            444555555555555555555544 22       12355555555555555555555544443

>KOG3993|consensus

Probab=98.87  E-value=5.2e-10  Score=102.18  Aligned_cols=179  Identities=18%  Similarity=0.238  Sum_probs=108.7

Q ss_pred             CccccccCCcccChHHHHHHHHhcCCCCCCCCccccccCCCceeecccchhhccChHHHHHHHhhcCCCCCCC--CCCC-
Q psy12165        125 DVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPT--SPLP-  201 (537)
Q Consensus       125 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~--~~~~-  201 (537)
                      .|.|..|...|.+.-.|.+|.-..-              ....|+|+.|++.|+...+|..|.+-|.....+.  ...+ 
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RI--------------V~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~  332 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRI--------------VHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPP  332 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCee--------------EEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCCh
Confidence            4889999999999888988864221              2345999999999999999999999987654332  1111 


Q ss_pred             -----------------CCCCCCccccccchhccCCHHHHHHHHHhccCccccccccCCCCcccH---------HHHhhh
Q psy12165        202 -----------------EPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETK---------VELLHH  255 (537)
Q Consensus       202 -----------------~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~---------~~l~~H  255 (537)
                                       ...+++.|.|..|++.|.....|+.|+..|+....-..-  ...|...         ..+..|
T Consensus       333 k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~--a~~f~~s~~~~l~~~~~~~a~h  410 (500)
T KOG3993|consen  333 KQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEK--APKFLLSRVIPLMHFNQAVATH  410 (500)
T ss_pred             hhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhc--ccCcchhhcccccccccccccc
Confidence                             114567899999999999999999998877752111000  0001111         011111


Q ss_pred             hhhccC----------CCCCcccccccccccccCHHHHHHHHHhccccCCCCCCcccccchhcccCcHHHHHHHhhcCCC
Q psy12165        256 MKTEHK----------DNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKD  325 (537)
Q Consensus       256 ~~~~h~----------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  325 (537)
                      ....+.          ....-.+.+  ++..+++...-..+.+.-...    ..|.|.+|..+|.+...|.+|+.+.|..
T Consensus       411 ~~a~~~~g~~vl~~a~sael~~pp~--~~~ppsss~~sgg~~rlg~~~----q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  411 SSASDSHGDEVLYVAGSAELELPPY--DGSPPSSSGSSGGYGRLGIAE----QGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             cccccccccceeeeeccccccCCCC--CCCCcccCCCCCccccccchh----hccccccchHhhhcCcchHhHhhhcChH
Confidence            111110          111223333  555555444333333222222    3677888888888888888888766653

>KOG1146|consensus

Probab=98.86  E-value=3.9e-10  Score=117.62  Aligned_cols=115  Identities=14%  Similarity=0.125  Sum_probs=82.9

Q ss_pred             cccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHH
Q psy12165        389 CRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYE  468 (537)
Q Consensus       389 C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~  468 (537)
                      |..|..-|.....+..|-.---.       .......+.|..|++.|...-.+. |+    -...+|.|..|...|....
T Consensus      1231 ~~~~e~~f~~~~~~~~~a~~~~~-------~~~~sGe~~c~~~~~~~~~~~~~~-~l----~~~~~~~~~~~~~~~~~~~ 1298 (1406)
T KOG1146|consen 1231 PNALEQPFPQEPEPTATAPPKPP-------ELPASGEGECGAVDELLTPSFGIS-TL----DVTHRYLCRQCKMAFDGEA 1298 (1406)
T ss_pred             HHhhhcCccCcccccccCCCCCC-------cCcCCCcchhhhccccccCcccee-ec----ccchhHHHHHHHhhhcchh
Confidence            77788888877776664321100       011134689999999998888877 76    2346799999999999999


Q ss_pred             HHHHHHHhhCCC-----------CcccccCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        469 ALALHLDQAHPG-----------YFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       469 ~l~~H~~~~H~~-----------~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      .|..|.++.-.-           .......+| |..|...|.....|..||++-.+..+
T Consensus      1299 ~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm~~~~~~~k 1356 (1406)
T KOG1146|consen 1299 PLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSGREALQIHMRSSAHRRK 1356 (1406)
T ss_pred             HHHHHHHHHHhccCccccCCCCcccCcccccc-chHHHhhcchhHHHHHHHHHhhhccc
Confidence            999998643211           111223556 99999999999999999998877654

>KOG3993|consensus

Probab=98.69  E-value=3.2e-09  Score=97.16  Aligned_cols=149  Identities=15%  Similarity=0.253  Sum_probs=95.8

Q ss_pred             ccccccccccccChhHHHHhHhhh-cCCccccccccccCCChHHHHHHHHhccCCCCCc---------c-----------
Q psy12165        359 PYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETK---------E-----------  417 (537)
Q Consensus       359 ~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~---------~-----------  417 (537)
                      .|.|..|...|.+...|.+|.-.- -.-.|+|+.|++.|.-..+|..|.+.|...+...         .           
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            478888888888888888885321 1123788888888888888888888886543221         0           


Q ss_pred             --CCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCc-----------------------------------------
Q psy12165        418 --QKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAG-----------------------------------------  454 (537)
Q Consensus       418 --~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----------------------------------------  454 (537)
                        .....+..|.|.+|+++|.....|++|....|....+                                         
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~  426 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAG  426 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeec
Confidence              0012345799999999999999999996333322110                                         


Q ss_pred             ----ccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhC
Q psy12165        455 ----LACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       455 ----~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                          ..|.+|+..+.+++.--.+.+--+      ....|.|.+|.-.|.+...|.+|+..-|-
T Consensus       427 sael~~pp~~~~ppsss~~sgg~~rlg~------~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  427 SAELELPPYDGSPPSSSGSSGGYGRLGI------AEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             cccccCCCCCCCCcccCCCCCccccccc------hhhccccccchHhhhcCcchHhHhhhcCh
Confidence                224444444443333322222111      13458999999999999999999876553

>PHA02768 hypothetical protein; Provisional

Probab=98.63  E-value=1.7e-08  Score=65.10  Aligned_cols=42  Identities=19%  Similarity=0.437  Sum_probs=26.0

Q ss_pred             cccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHH
Q psy12165        387 VNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFM  441 (537)
Q Consensus       387 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l  441 (537)
                      |.|+.||+.|....+|..|+++|+.             +|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~k-------------~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHNT-------------NLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcCC-------------cccCCcccceeccccee
Confidence            5666666666666666666666663             46666666666555444

>PHA02768 hypothetical protein; Provisional

Probab=98.56  E-value=2.7e-08  Score=64.16  Aligned_cols=43  Identities=21%  Similarity=0.403  Sum_probs=35.1

Q ss_pred             ccccccccccccChhHHHHhHhhhcCCccccccccccCCChHHH
Q psy12165        359 PYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPEL  402 (537)
Q Consensus       359 ~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~C~~C~~~f~~~~~L  402 (537)
                      .|.|+.||+.|...++|..|+++|. ++|+|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceeccccee
Confidence            4788888888888888888888886 688888888888776654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.32  E-value=9.8e-07  Score=58.75  Aligned_cols=51  Identities=25%  Similarity=0.458  Sum_probs=25.7

Q ss_pred             ccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhh
Q psy12165        455 LACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       455 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      |.|++|++ .-+...|..|+...|..    +.+.+.|++|...++  .+|..||.+++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~----~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRS----ESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcC----CCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            45555555 23345555555555543    123455555555433  25555555544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.23  E-value=6.7e-07  Score=49.12  Aligned_cols=24  Identities=38%  Similarity=0.841  Sum_probs=12.9

Q ss_pred             HHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCC
Q psy12165        402 LKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWP  436 (537)
Q Consensus       402 L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~  436 (537)
                      |.+|+++|++           ++||.|+.|+++|.
T Consensus         2 l~~H~~~H~~-----------~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTG-----------EKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSS-----------SSSEEESSSSEEES
T ss_pred             HHHHhhhcCC-----------CCCCCCCCCcCeeC
Confidence            4555555555           45555555555553

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.22  E-value=5.1e-07  Score=49.58  Aligned_cols=24  Identities=25%  Similarity=0.483  Sum_probs=13.2

Q ss_pred             HHHHHHhhcCCCCcccccccccccC
Q psy12165        441 MWQHLIRSHKAVAGLACGVCLKISE  465 (537)
Q Consensus       441 l~~H~~~~H~~~~~~~C~~C~~~f~  465 (537)
                      |..|+ +.|++++||.|+.|++.|.
T Consensus         2 l~~H~-~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHM-RTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHH-HHHSSSSSEEESSSSEEES
T ss_pred             HHHHh-hhcCCCCCCCCCCCcCeeC
Confidence            45555 3555555555555555554

...

>PHA00616 hypothetical protein

Probab=98.19  E-value=7.5e-07  Score=54.55  Aligned_cols=29  Identities=21%  Similarity=0.308  Sum_probs=24.6

Q ss_pred             CcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        488 NPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       488 ~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ||+|..||+.|..++.|+.|++.|+|.++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc
Confidence            58888888888888888888888888876

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.13  E-value=4.8e-06  Score=55.42  Aligned_cols=51  Identities=25%  Similarity=0.512  Sum_probs=38.3

Q ss_pred             CcccCCCCCCCCChHHHHHHHHhhcCCC-CcccccccccccCCHHHHHHHHHhhC
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHLIRSHKAV-AGLACGVCLKISETYEALALHLDQAH  478 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H  478 (537)
                      .|.||+|++. -+...|..|+...|..+ +.+.|++|...+.  .+|..|+...|
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            4788888884 46778888888888765 4578888887655  48888888766

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.12  E-value=2.3e-06  Score=61.39  Aligned_cols=37  Identities=27%  Similarity=0.383  Sum_probs=17.5

Q ss_pred             cccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccC
Q psy12165        426 VTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISE  465 (537)
Q Consensus       426 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  465 (537)
                      |.|+.|++.|.+...|..|++..|.   ++.|+.|++.|.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~   38 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR   38 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC
Confidence            4455555555555555555422332   234555555554

>PHA00732 hypothetical protein

Probab=98.08  E-value=3e-06  Score=60.83  Aligned_cols=44  Identities=25%  Similarity=0.539  Sum_probs=34.3

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHH
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHL  445 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  445 (537)
                      ||.|+.||+.|.+...|..|++.++.             ++.|+.|++.|.   .|..|+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~-------------~~~C~~CgKsF~---~l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT-------------LTKCPVCNKSYR---RLNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC-------------CCccCCCCCEeC---Chhhhh
Confidence            57888888888888888888875333             257888888886   577887

>PHA00616 hypothetical protein

Probab=98.06  E-value=1.9e-06  Score=52.82  Aligned_cols=25  Identities=32%  Similarity=0.596  Sum_probs=11.1

Q ss_pred             cccccccccCCChHHHHHHHHhccC
Q psy12165        387 VNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       387 ~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+|+.||+.|...++|..|++.|++
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg   26 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHK   26 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcC
Confidence            4444444444444444444444444

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.88  E-value=6.8e-06  Score=43.89  Aligned_cols=23  Identities=26%  Similarity=0.768  Sum_probs=17.0

Q ss_pred             cccccccccccChhHHHHHHhhh
Q psy12165        489 PTCEVCGRYHNARPKLESHLAVH  511 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~h  511 (537)
                      |+|+.|++.|.++..|..||+.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.69  E-value=2.3e-05  Score=41.81  Aligned_cols=23  Identities=26%  Similarity=0.534  Sum_probs=21.3

Q ss_pred             cccccccccccchHHHHHhHHhh
Q psy12165         11 LSCGNCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus        11 ~~C~~C~~~f~~~~~L~~H~~~~   33 (537)
                      |.|++|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            68999999999999999999863

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.63  E-value=3.1e-05  Score=41.81  Aligned_cols=24  Identities=25%  Similarity=0.717  Sum_probs=14.3

Q ss_pred             cccccccccccChhHHHHHHhhhh
Q psy12165        489 PTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      |.|++|++.|.+...|+.|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666653

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.57  E-value=3.6e-05  Score=59.53  Aligned_cols=73  Identities=19%  Similarity=0.294  Sum_probs=15.8

Q ss_pred             ccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHH
Q psy12165        427 TCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLES  506 (537)
Q Consensus       427 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~  506 (537)
                      +|..|+..|++...|..|+...|.-..+     ....+.....+..++...  .     ...+.|.+|++.|.+...|..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~--~-----~~~~~C~~C~~~f~s~~~l~~   68 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRKK--V-----KESFRCPYCNKTFRSREALQE   68 (100)
T ss_dssp             ------------------------------------------------------------SSEEBSSSS-EESSHHHHHH
T ss_pred             Cccccccccccccccccccccccccccc-----cccccccccccccccccc--c-----CCCCCCCccCCCCcCHHHHHH
Confidence            3666666666666666666555543322     111111233333333211  0     124667777777777777777


Q ss_pred             HHhhh
Q psy12165        507 HLAVH  511 (537)
Q Consensus       507 H~~~h  511 (537)
                      ||+.+
T Consensus        69 Hm~~~   73 (100)
T PF12756_consen   69 HMRSK   73 (100)
T ss_dssp             HHHHT
T ss_pred             HHcCc
Confidence            76654

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.56  E-value=5e-05  Score=40.99  Aligned_cols=24  Identities=33%  Similarity=0.657  Sum_probs=20.5

Q ss_pred             cccccccccccchHHHHHhHHhhC
Q psy12165         11 LSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus        11 ~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      |.|++|++.|.+..+|..|++.+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999999875

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.45  E-value=6.8e-05  Score=41.78  Aligned_cols=25  Identities=24%  Similarity=0.476  Sum_probs=23.4

Q ss_pred             ccccccccccccchHHHHHhHHhhC
Q psy12165         10 ALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus        10 ~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      ||.|..|++.|.+..+|.+|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998875

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.43  E-value=9.3e-05  Score=57.21  Aligned_cols=75  Identities=21%  Similarity=0.321  Sum_probs=22.8

Q ss_pred             ccCCCcCcCCChHHHHHHHHhhcCCCCCccccccCCcccChHHHHHHHHhcCCCCCCCCccccccCCCceeecccchhhc
Q psy12165         98 VCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQF  177 (537)
Q Consensus        98 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~C~~C~~~f  177 (537)
                      .|..|+..|.+...|..|+...|.-..+     ....+.....+..++..-               ....+.|.+|++.|
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~~~~---------------~~~~~~C~~C~~~f   60 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYLRKK---------------VKESFRCPYCNKTF   60 (100)
T ss_dssp             --------------------------------------------------------------------SSEEBSSSS-EE
T ss_pred             Cccccccccccccccccccccccccccc-----cccccccccccccccccc---------------cCCCCCCCccCCCC
Confidence            3777888888888888887666643211     111222333333333321               23369999999999


Q ss_pred             cChHHHHHHHhhcCC
Q psy12165        178 KQNWLLQKHKKTCKG  192 (537)
Q Consensus       178 ~~~~~l~~H~~~h~~  192 (537)
                      .+...|..|+..+..
T Consensus        61 ~s~~~l~~Hm~~~~H   75 (100)
T PF12756_consen   61 RSREALQEHMRSKHH   75 (100)
T ss_dssp             SSHHHHHHHHHHTTT
T ss_pred             cCHHHHHHHHcCccC
Confidence            999999999987543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.43  E-value=6.1e-05  Score=41.97  Aligned_cols=26  Identities=23%  Similarity=0.506  Sum_probs=18.4

Q ss_pred             CcccccccccccChhHHHHHHhhhhC
Q psy12165        488 NPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       488 ~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      ||+|..|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            46777777777777777777776653

>KOG2231|consensus

Probab=97.35  E-value=0.0004  Score=69.96  Aligned_cols=22  Identities=18%  Similarity=0.436  Sum_probs=11.7

Q ss_pred             chHHHHHhHHhhCcccccccccccce
Q psy12165         22 DNLSLLKHVEEEHPTMQRRYSCQVHI   47 (537)
Q Consensus        22 ~~~~L~~H~~~~h~~~~~~~~C~~c~   47 (537)
                      +...|..||...|    +-+.|..|.
T Consensus       126 s~~~Lk~H~~~~H----~~~~c~lC~  147 (669)
T KOG2231|consen  126 SVENLKNHMRDQH----KLHLCSLCL  147 (669)
T ss_pred             HHHHHHHHHHHhh----hhhcccccc
Confidence            5556666664443    345555554

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.32  E-value=0.00014  Score=64.77  Aligned_cols=67  Identities=30%  Similarity=0.469  Sum_probs=50.2

Q ss_pred             CCceeeccc--chhhccChHHHHHHHhhcCC-CCCCCCCCCC-----CCCCCccccccchhccCCHHHHHHHHHh
Q psy12165        164 GESVHICHL--CQKQFKQNWLLQKHKKTCKG-PKRPTSPLPE-----PDEDGIFRCKKCVKVFVNPDIYKKHLKH  230 (537)
Q Consensus       164 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-~~~~~~~~~~-----~~~~~~~~C~~C~~~f~~~~~l~~H~~~  230 (537)
                      +++||+|++  |++.+.++..|+.|+..-|. .+-.+.+.++     ...+.||+|++|++.|.+...|+.|...
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            459999997  99999999999999875442 2211111111     2356799999999999999999999764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.27  E-value=0.00016  Score=38.87  Aligned_cols=24  Identities=25%  Similarity=0.469  Sum_probs=16.5

Q ss_pred             cccccccccccChhHHHHHHhhhhC
Q psy12165        489 PTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      |+|+.|+++.+ +..|.+|+++|+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            57788887777 7778888777664

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.27  E-value=0.00011  Score=65.45  Aligned_cols=63  Identities=17%  Similarity=0.377  Sum_probs=41.2

Q ss_pred             cCCcccccc--ccccCCChHHHHHHHHhccCCCCCc-------cCC-CCCCCCcccCCCCCCCCChHHHHHHH
Q psy12165        383 GEHLVNCRV--CGSIFHSEPELKVHLEEHTDVPETK-------EQK-PRPELPVTCDLCSKEWPSRKFMWQHL  445 (537)
Q Consensus       383 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~-------~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~  445 (537)
                      +++||+|++  |.+.++....|+.|+.--+..+..-       .+. ...++||+|++|++++.....|+-|.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            568999988  9999999999999986433221111       010 12346777777777777777776664

>KOG1146|consensus

Probab=97.26  E-value=0.00011  Score=78.30  Aligned_cols=59  Identities=19%  Similarity=0.274  Sum_probs=40.3

Q ss_pred             cccccccccc-CCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhC
Q psy12165        455 LACGVCLKIS-ETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       455 ~~C~~C~~~f-~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      |.|-+|.... .+...|..|+..-=......-...|.|.+|.+....+.++..|.+..--
T Consensus       735 ~~civcd~~st~~l~~l~~h~~~~rs~ke~v~g~~~~c~l~~y~t~~kanfqlh~Ktdkh  794 (1406)
T KOG1146|consen  735 FDCIVCDVFSTDRLDQLWFHNTRERSRKEQVPGDVPSCKLKPYATNTKANFQLHNKTDKH  794 (1406)
T ss_pred             HHHhhhhhhhhhhHHHHhhcchhhhhhhhcccCCCCcceecccccccchhhhhhcccchh
Confidence            7799997644 4556677775422211112234679999999999999999999876543

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.21  E-value=0.00069  Score=61.13  Aligned_cols=139  Identities=23%  Similarity=0.423  Sum_probs=94.9

Q ss_pred             cccccc--chhccCCHHHHHHHHHhccCccccccccCCCCcccHHHHhhhhhhccCCCCCcccccccccccccCHHHHHH
Q psy12165        208 IFRCKK--CVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQK  285 (537)
Q Consensus       208 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~~~l~~H~~~~h~~~~~~~C~~~~C~~~f~~~~~l~~  285 (537)
                      .|.|+.  |.........|..|.+..|+.+.|..|...                   .+.|.|     .....+...|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~n-------------------Kk~F~~-----E~~lF~~~~Lr~  206 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGN-------------------KKDFWN-----EIRLFRSSTLRD  206 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcC-------------------cccCcc-----ceeeeecccccc
Confidence            378876  888888899999999999999999999432                   223433     233344555666


Q ss_pred             HHHhccccCCCCCCcccccchhcccCcHHHHHHHhhcCCCCCccccCCccc-------ccCCHHHHHHHHHhhccccCCC
Q psy12165        286 HCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFV-------VEDNLSALEAHVAAKHKAIIKK  358 (537)
Q Consensus       286 H~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~-------~~~~~~~l~~H~~~~h~~~~~~  358 (537)
                      |...-.....-..-..|..|..-|.+-..|..|++..|..     |-+|+.       -|.+-..|..|.+..       
T Consensus       207 H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE~-----ChICD~v~p~~~QYFK~Y~~Le~HF~~~-------  274 (493)
T COG5236         207 HKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHEA-----CHICDMVGPIRYQYFKSYEDLEAHFRNA-------  274 (493)
T ss_pred             cccCCccccCcCCCchhhhccceecChHHHHHHHHhhhhh-----hhhhhccCccchhhhhCHHHHHHHhhcC-------
Confidence            6543322211112346999999999999999999876754     667754       366677888888753       


Q ss_pred             cccccc--cc----ccccChhHHHHhHh-hh
Q psy12165        359 PYACRI--CA----RLLGNGVKVSEHIK-LH  382 (537)
Q Consensus       359 ~~~C~~--C~----~~f~~~~~l~~H~~-~H  382 (537)
                      -|.|..  |.    .+|.....|..|+. .|
T Consensus       275 hy~ct~qtc~~~k~~vf~~~~el~~h~~~~h  305 (493)
T COG5236         275 HYCCTFQTCRVGKCYVFPYHTELLEHLTRFH  305 (493)
T ss_pred             ceEEEEEEEecCcEEEeccHHHHHHHHHHHh
Confidence            355544  42    47888888999876 55

>KOG2231|consensus

Probab=97.12  E-value=0.00089  Score=67.55  Aligned_cols=114  Identities=23%  Similarity=0.468  Sum_probs=70.1

Q ss_pred             cccccchhccCCHHHHHHHHHhccCccccccccCCCCcccHHHHhhhhhhccCCCCCcccccccccccccCHHHHHHHHH
Q psy12165        209 FRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCR  288 (537)
Q Consensus       209 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~~~~~~~~~~~l~~H~~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~  288 (537)
                      -.|..| ..|.+...|+.|+...|..+.|..|-..                   .+.|.+    +.+ .-+..+|..|+.
T Consensus       116 ~~~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~-------------------~kif~~----e~k-~Yt~~el~~h~~  170 (669)
T KOG2231|consen  116 KECLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQN-------------------LKIFIN----ERK-LYTRAELNLHLM  170 (669)
T ss_pred             CCCccc-cchhHHHHHHHHHHHhhhhhcccccccc-------------------ceeeee----eee-hehHHHHHHHHh
Confidence            358888 8889999999999999999999999543                   222222    222 223445555544


Q ss_pred             hccc-cCCCCCCcccccchhcccCcHHHHHHHhhcCCCCCccccCCc------ccccCCHHHHHHHHHhhc
Q psy12165        289 EHKT-VTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSAC------FVVEDNLSALEAHVAAKH  352 (537)
Q Consensus       289 ~h~~-~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C------~~~~~~~~~l~~H~~~~h  352 (537)
                      .-.. ..+-.....|..|...|.....|..|++..|-     .|..|      ..-|..-..|..|.+..|
T Consensus       171 ~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h~-----~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  171 FGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDHE-----FCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cCCCccccccCCccchhhhhhhccHHHHHHhhcccee-----heeecCcccccchhcccchHHHHHhhhcC
Confidence            3322 11111124577777777777777777765443     34444      344566677777777555

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=97.09  E-value=0.0011  Score=59.99  Aligned_cols=146  Identities=23%  Similarity=0.307  Sum_probs=95.5

Q ss_pred             Ccccc--cchhcccCcHHHHHHHhhcCCCCCccccCCcccccCCHHHHHHHHHhhccccCCCccccccccccccChhHHH
Q psy12165        299 TNYCN--FCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVS  376 (537)
Q Consensus       299 ~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~  376 (537)
                      .|.|+  .|.........|..|.+..|..   +.|.+|-..                   ++.|.|.+   ..-+...|.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~---~~C~~C~~n-------------------Kk~F~~E~---~lF~~~~Lr  205 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF---VLCSECIGN-------------------KKDFWNEI---RLFRSSTLR  205 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc---EEhHhhhcC-------------------cccCccce---eeeeccccc
Confidence            56775  4777777778888888876654   556666421                   24444432   222345677


Q ss_pred             HhHhhh-cCCcc----ccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCC-------CCCChHHHHHH
Q psy12165        377 EHIKLH-GEHLV----NCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSK-------EWPSRKFMWQH  444 (537)
Q Consensus       377 ~H~~~H-~~~~~----~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~-------~f~~~~~l~~H  444 (537)
                      .|...- .+..|    .|..|...|.+-..|..|++.-+.               +|-+|++       -|.+...|..|
T Consensus       206 ~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE---------------~ChICD~v~p~~~QYFK~Y~~Le~H  270 (493)
T COG5236         206 DHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHE---------------ACHICDMVGPIRYQYFKSYEDLEAH  270 (493)
T ss_pred             ccccCCccccCcCCCchhhhccceecChHHHHHHHHhhhh---------------hhhhhhccCccchhhhhCHHHHHHH
Confidence            776543 22122    499999999999999999986553               3555553       46777888888


Q ss_pred             HHhhcCCCCcccccc--cc----cccCCHHHHHHHHHhhCCCCcccccCCc
Q psy12165        445 LIRSHKAVAGLACGV--CL----KISETYEALALHLDQAHPGYFAEEVDNP  489 (537)
Q Consensus       445 ~~~~H~~~~~~~C~~--C~----~~f~~~~~l~~H~~~~H~~~~~~~~~~~  489 (537)
                      .+..|     |.|.+  |-    ..|.....|..|+.+-|.....+.+.++
T Consensus       271 F~~~h-----y~ct~qtc~~~k~~vf~~~~el~~h~~~~h~~~~~~~~~~~  316 (493)
T COG5236         271 FRNAH-----YCCTFQTCRVGKCYVFPYHTELLEHLTRFHKVNARLSEIPR  316 (493)
T ss_pred             hhcCc-----eEEEEEEEecCcEEEeccHHHHHHHHHHHhhcccccCcCCC
Confidence            86555     55544  31    5788999999999999987555554444

>smart00355 ZnF_C2H2 zinc finger

Probab=96.93  E-value=0.00076  Score=36.95  Aligned_cols=24  Identities=25%  Similarity=0.692  Sum_probs=17.1

Q ss_pred             cccccccccccChhHHHHHHhhhh
Q psy12165        489 PTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      |.|+.|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467777777777777777777654

>KOG2785|consensus

Probab=96.84  E-value=0.004  Score=57.68  Aligned_cols=87  Identities=17%  Similarity=0.350  Sum_probs=53.7

Q ss_pred             cccccccccccccchHHHHHhHHhhCcccccccccccceeeehhhcccchhhhhhhhhhcCcccccccccccccHHHHHH
Q psy12165          9 AALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHIILVLNTLLDDNLSLLKHVEEEHPTMQRRYSCQVDTMEAIKE   88 (537)
Q Consensus         9 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~c~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~~c~~~~~~~~~~   88 (537)
                      ..|.|..|...|.+...-+.|+++.                 |     -+++|.+-+...-|.....|.-...+...-..
T Consensus         2 t~ftC~tC~v~F~~ad~Qr~HyKSd-----------------W-----HRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~   59 (390)
T KOG2785|consen    2 TGFTCNTCNVEFDDADEQRAHYKSD-----------------W-----HRYNLKRKVASLPPITAEEFNEKVLSDDSEKE   59 (390)
T ss_pred             CcceeeceeeeeccHHHHHHHhhhh-----------------H-----HHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhh
Confidence            3589999999999999999999863                 1     34455555444332222222221111111111


Q ss_pred             h-hhcCCCccccCCCcCcCCChHHHHHHHH
Q psy12165         89 H-RKTEHAMYVCDLCPKYYSRSTHLWKHVN  117 (537)
Q Consensus        89 h-~~~~~~~~~C~~C~~~f~~~~~l~~H~~  117 (537)
                      - ......++.|.+|.+.|.+..+...|+.
T Consensus        60 ~~~e~~~~~~~c~~c~k~~~s~~a~~~hl~   89 (390)
T KOG2785|consen   60 ENLEEAESVVYCEACNKSFASPKAHENHLK   89 (390)
T ss_pred             hhhhhcccceehHHhhccccChhhHHHHHH
Confidence            1 2233457889999999999999888885

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.63  E-value=0.0013  Score=41.28  Aligned_cols=31  Identities=23%  Similarity=0.404  Sum_probs=17.5

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      +.|-.|++|+..+.+..+|++||.++++.++
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            4566677777777777777777777766654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.60  E-value=0.0011  Score=35.53  Aligned_cols=24  Identities=25%  Similarity=0.593  Sum_probs=19.7

Q ss_pred             cccccccccccchHHHHHhHHhhCc
Q psy12165         11 LSCGNCLKVFRDNLSLLKHVEEEHP   35 (537)
Q Consensus        11 ~~C~~C~~~f~~~~~L~~H~~~~h~   35 (537)
                      |+|+.|+.... +..|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            68999999998 9999999998763

>KOG2482|consensus

Probab=96.51  E-value=0.0095  Score=54.05  Aligned_cols=192  Identities=19%  Similarity=0.250  Sum_probs=107.1

Q ss_pred             cHHHHHHHhhcCCCCCccccCCcccc-cCCHHHHHHHHHhhccccCCCccccccccccccChhHHHHhHhhhcCCccccc
Q psy12165        312 RKKLWLHLKSTHKDLTNCMCSACFVV-EDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLHGEHLVNCR  390 (537)
Q Consensus       312 ~~~l~~H~~~~H~~~~~~~C~~C~~~-~~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~C~  390 (537)
                      +..|..|++..-.......|-.|... ..+++.+..|+...|.-.+..|-       ....-..|..|++.- -..+.|-
T Consensus       128 ~eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpD-------niVyvnelLehLkek-L~r~~CL  199 (423)
T KOG2482|consen  128 KEALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPD-------NIVYVNELLEHLKEK-LERLRCL  199 (423)
T ss_pred             HHHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCc-------ceeeHHHHHHHHHHH-Hhhheee
Confidence            44566666544333444567777654 34566677777777654333331       112234566666533 1246899


Q ss_pred             cccccCCChHHHHHHHHh--ccCCCCCccCCCCCCCCcccCC--CCCCC-CChHHH-----HHHH--------HhhcCCC
Q psy12165        391 VCGSIFHSEPELKVHLEE--HTDVPETKEQKPRPELPVTCDL--CSKEW-PSRKFM-----WQHL--------IRSHKAV  452 (537)
Q Consensus       391 ~C~~~f~~~~~L~~H~~~--h~~~~~~~~~~~~~~~~~~C~~--C~~~f-~~~~~l-----~~H~--------~~~H~~~  452 (537)
                      .|.+.|..+..|+.||+.  |..+.+...+-   .+-|-=++  =|++. ...+.+     ..+-        ...+..+
T Consensus       200 yCekifrdkntLkeHMrkK~HrrinPknreY---DkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~  276 (423)
T KOG2482|consen  200 YCEKIFRDKNTLKEHMRKKRHRRINPKNREY---DKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAE  276 (423)
T ss_pred             eeccccCCcHHHHHHHHhccCcccCCCcccc---ceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCC
Confidence            999999999999999984  54443332211   00000000  00000 000000     0000        0011111


Q ss_pred             C-cccccccccccCCHHHHHHHHHhhCCCCc---------------------ccccCCcccccccccccChhHHHHHHh-
Q psy12165        453 A-GLACGVCLKISETYEALALHLDQAHPGYF---------------------AEEVDNPTCEVCGRYHNARPKLESHLA-  509 (537)
Q Consensus       453 ~-~~~C~~C~~~f~~~~~l~~H~~~~H~~~~---------------------~~~~~~~~C~~C~~~f~~~~~l~~H~~-  509 (537)
                      . ...|-+|.....+...|..||..+|.-..                     .-....-.|-.|+.+|.....|..||. 
T Consensus       277 a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  277 ALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             ccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            1 15899999999999999999999885310                     001122479999999999999999996 


Q ss_pred             -hhhCC
Q psy12165        510 -VHVGL  514 (537)
Q Consensus       510 -~h~g~  514 (537)
                       .|+++
T Consensus       357 ~k~l~i  362 (423)
T KOG2482|consen  357 DKHLSI  362 (423)
T ss_pred             cccccc
Confidence             44554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.49  E-value=0.0016  Score=35.39  Aligned_cols=23  Identities=30%  Similarity=0.579  Sum_probs=21.0

Q ss_pred             cccccccccccchHHHHHhHHhh
Q psy12165         11 LSCGNCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus        11 ~~C~~C~~~f~~~~~L~~H~~~~   33 (537)
                      |.|.+|+..|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            67999999999999999999754

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.41  E-value=0.0016  Score=35.32  Aligned_cols=23  Identities=22%  Similarity=0.571  Sum_probs=16.3

Q ss_pred             cccccccccccChhHHHHHHhhh
Q psy12165        489 PTCEVCGRYHNARPKLESHLAVH  511 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~h  511 (537)
                      |.|++|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45777777777777777777644

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.35  E-value=0.002  Score=40.46  Aligned_cols=29  Identities=28%  Similarity=0.608  Sum_probs=17.0

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      .+.|-.|++|+..+....+|++|+.+.++
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            56667777777777777777777766655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.23  E-value=0.0044  Score=33.78  Aligned_cols=22  Identities=41%  Similarity=0.940  Sum_probs=10.8

Q ss_pred             ccccccccCCChHHHHHHHHhc
Q psy12165        388 NCRVCGSIFHSEPELKVHLEEH  409 (537)
Q Consensus       388 ~C~~C~~~f~~~~~L~~H~~~h  409 (537)
                      .|+.|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4455555555555555554433

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.23  E-value=0.0022  Score=35.56  Aligned_cols=22  Identities=27%  Similarity=0.588  Sum_probs=20.7

Q ss_pred             cccccccccccchHHHHHhHHh
Q psy12165         11 LSCGNCLKVFRDNLSLLKHVEE   32 (537)
Q Consensus        11 ~~C~~C~~~f~~~~~L~~H~~~   32 (537)
                      |.|.+|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999975

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=95.89  E-value=0.024  Score=51.53  Aligned_cols=25  Identities=24%  Similarity=0.478  Sum_probs=22.4

Q ss_pred             ceeecccchhhccChHHHHHHHhhc
Q psy12165        166 SVHICHLCQKQFKQNWLLQKHKKTC  190 (537)
Q Consensus       166 ~~~~C~~C~~~f~~~~~l~~H~~~h  190 (537)
                      ..+.|-+|.+.|+.+..|+.||+.-
T Consensus       194 ~r~~CLyCekifrdkntLkeHMrkK  218 (423)
T KOG2482|consen  194 ERLRCLYCEKIFRDKNTLKEHMRKK  218 (423)
T ss_pred             hhheeeeeccccCCcHHHHHHHHhc
Confidence            4589999999999999999999753

>KOG4173|consensus

Probab=95.62  E-value=0.0076  Score=50.40  Aligned_cols=93  Identities=22%  Similarity=0.488  Sum_probs=73.2

Q ss_pred             CCceeeccc--chhhccChHHHHHHHhhcCCCCCCCCCCCCCCCCCccccccchhccCCHHHHHHHHHhccCcccccccc
Q psy12165        164 GESVHICHL--CQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCI  241 (537)
Q Consensus       164 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~c~~c~  241 (537)
                      ....+.|+.  |...|.+...+..|...-|+.                .|.+|.+.|++...|..|+...|..+      
T Consensus        76 ~~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~----------------sCs~C~r~~Pt~hLLd~HI~E~HDs~------  133 (253)
T KOG4173|consen   76 RVPAFACQVAGCCQVFDALDDYEHHYHTLHGN----------------SCSFCKRAFPTGHLLDAHILEWHDSL------  133 (253)
T ss_pred             ccccccccccchHHHHhhhhhHHHhhhhcccc----------------hhHHHHHhCCchhhhhHHHHHHHHHH------
Confidence            455688987  999999999999998777764                59999999999999999998666532      


Q ss_pred             CCCCcccHHHHhhhhhhccCCCCCcccccccccccccCHHHHHHHHHhcc
Q psy12165        242 TAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHK  291 (537)
Q Consensus       242 ~~~~~~~~~~l~~H~~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  291 (537)
                          |...         ...+...|+|-+++|+..|.+...-..|+..-+
T Consensus       134 ----Fqa~---------veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  134 ----FQAL---------VERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             ----HHHH---------HHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhc
Confidence                2111         123466799999999999999999888876544

>KOG2785|consensus

Probab=95.59  E-value=0.02  Score=53.26  Aligned_cols=28  Identities=32%  Similarity=0.442  Sum_probs=24.6

Q ss_pred             CCCceeecccchhhccChHHHHHHHhhc
Q psy12165        163 FGESVHICHLCQKQFKQNWLLQKHKKTC  190 (537)
Q Consensus       163 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h  190 (537)
                      .+..++.|..|.+.|.+......|+..-
T Consensus        64 ~~~~~~~c~~c~k~~~s~~a~~~hl~Sk   91 (390)
T KOG2785|consen   64 EAESVVYCEACNKSFASPKAHENHLKSK   91 (390)
T ss_pred             hcccceehHHhhccccChhhHHHHHHHh
Confidence            3677899999999999999999999764

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.39  E-value=0.0056  Score=33.88  Aligned_cols=22  Identities=23%  Similarity=0.703  Sum_probs=16.1

Q ss_pred             cccccccccccChhHHHHHHhh
Q psy12165        489 PTCEVCGRYHNARPKLESHLAV  510 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~  510 (537)
                      |-|..|++.|.+...|.+|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777754

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.21  E-value=0.03  Score=46.65  Aligned_cols=13  Identities=23%  Similarity=0.529  Sum_probs=5.9

Q ss_pred             CCCcccCCCCCCC
Q psy12165        423 ELPVTCDLCSKEW  435 (537)
Q Consensus       423 ~~~~~C~~C~~~f  435 (537)
                      +++|.|..|+..|
T Consensus       141 ~~~YrC~~C~~~l  153 (160)
T PRK04860        141 EAVYRCRRCGETL  153 (160)
T ss_pred             CccEECCCCCcee
Confidence            3344444444444

>PRK04860 hypothetical protein; Provisional

Probab=93.25  E-value=0.035  Score=46.22  Aligned_cols=39  Identities=21%  Similarity=0.378  Sum_probs=26.2

Q ss_pred             CCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCH
Q psy12165        424 LPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETY  467 (537)
Q Consensus       424 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~  467 (537)
                      -+|.|. |+.   ....+..|. +.|+++++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~-ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHN-RVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHH-HHhcCCccEECCCCCceeEEe
Confidence            357776 765   556667775 677777777777777666543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.25  E-value=0.041  Score=35.18  Aligned_cols=33  Identities=30%  Similarity=0.575  Sum_probs=29.4

Q ss_pred             CCCccccccccccccccccchHHHHHhHHhhCc
Q psy12165          3 HGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHP   35 (537)
Q Consensus         3 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~   35 (537)
                      .++.+|.-++||-|+..|.+..++.+|+...|.
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            457789999999999999999999999987763

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.03  E-value=0.076  Score=28.62  Aligned_cols=21  Identities=29%  Similarity=0.453  Sum_probs=18.1

Q ss_pred             cccccccccccchHHHHHhHHh
Q psy12165         11 LSCGNCLKVFRDNLSLLKHVEE   32 (537)
Q Consensus        11 ~~C~~C~~~f~~~~~L~~H~~~   32 (537)
                      ..|++|++.| ....|.+|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 67999999864

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.03  E-value=0.095  Score=28.24  Aligned_cols=21  Identities=33%  Similarity=0.752  Sum_probs=14.1

Q ss_pred             cccccccccccChhHHHHHHhh
Q psy12165        489 PTCEVCGRYHNARPKLESHLAV  510 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~  510 (537)
                      ..|+.|++.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4577777777 56667777654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.74  E-value=0.07  Score=31.58  Aligned_cols=25  Identities=24%  Similarity=0.543  Sum_probs=22.1

Q ss_pred             cccccccccccccchHHHHHhHHhh
Q psy12165          9 AALSCGNCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus         9 ~~~~C~~C~~~f~~~~~L~~H~~~~   33 (537)
                      .+|.|.+|+..|.+...+..|++..
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHChH
Confidence            4689999999999999999998753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.22  E-value=0.094  Score=31.00  Aligned_cols=22  Identities=23%  Similarity=0.475  Sum_probs=19.1

Q ss_pred             CcccccccccccChhHHHHHHh
Q psy12165        488 NPTCEVCGRYHNARPKLESHLA  509 (537)
Q Consensus       488 ~~~C~~C~~~f~~~~~l~~H~~  509 (537)
                      +|.|++|+..|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5889999999999999999975

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=92.15  E-value=0.087  Score=44.30  Aligned_cols=91  Identities=22%  Similarity=0.496  Sum_probs=63.0

Q ss_pred             CCCcccccccccccccCHHHHHHHHHhccccCCCCCCcccccchhcccCcHHHHHHHhhcCCCCCccccCCcccccCCHH
Q psy12165        263 NEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLS  342 (537)
Q Consensus       263 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~~~  342 (537)
                      ...|.|.+.+|-..|.+......|....++..       |..|.+.|++...|-.|+...|..-                
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~s-------Cs~C~r~~Pt~hLLd~HI~E~HDs~----------------  133 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHGNS-------CSFCKRAFPTGHLLDAHILEWHDSL----------------  133 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhcccch-------hHHHHHhCCchhhhhHHHHHHHHHH----------------
Confidence            34588998999999999988888887766553       9999999999999999998666420                


Q ss_pred             HHHHHHHhhccccCCCcccccc--ccccccChhHHHHhHh-hh
Q psy12165        343 ALEAHVAAKHKAIIKKPYACRI--CARLLGNGVKVSEHIK-LH  382 (537)
Q Consensus       343 ~l~~H~~~~h~~~~~~~~~C~~--C~~~f~~~~~l~~H~~-~H  382 (537)
                       ++.-   +..  +...|.|-+  |+..|.+...-..|+- .|
T Consensus       134 -Fqa~---veR--G~dMy~ClvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  134 -FQAL---VER--GQDMYQCLVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             -HHHH---HHc--CccHHHHHHHhhhhhhhhhhhhhhHHHHhc
Confidence             0000   011  135566643  7777776666666654 44

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.99  E-value=0.56  Score=36.58  Aligned_cols=25  Identities=20%  Similarity=0.479  Sum_probs=20.1

Q ss_pred             ccc----ccccccccChhHHHHHHhhhhC
Q psy12165        489 PTC----EVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       489 ~~C----~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      |.|    ..|++.+.+...+.+|++.+||
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            778    8888888888888888887775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=89.74  E-value=0.12  Score=44.59  Aligned_cols=46  Identities=30%  Similarity=0.578  Sum_probs=24.2

Q ss_pred             cCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhC
Q psy12165        428 CDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAH  478 (537)
Q Consensus       428 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  478 (537)
                      |=+|++.|.....|.+|.+..|     |+|.+|.+..-+--.|.-|..++|
T Consensus        13 cwycnrefddekiliqhqkakh-----fkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc-----ceeeeehhhhccCCCceeehhhhh
Confidence            5555555555555555553333     555555555444444555544444

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=88.86  E-value=0.25  Score=28.75  Aligned_cols=25  Identities=28%  Similarity=0.788  Sum_probs=19.1

Q ss_pred             ccccCCCcCcCCChHHHHHHHHhhcCCCCCccccccCC
Q psy12165         96 MYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSK  133 (537)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  133 (537)
                      .|+|.+||+.+....             .++.|++|+.
T Consensus         1 ~~~C~~CGy~y~~~~-------------~~~~CP~Cg~   25 (33)
T cd00350           1 KYVCPVCGYIYDGEE-------------APWVCPVCGA   25 (33)
T ss_pred             CEECCCCCCEECCCc-------------CCCcCcCCCC
Confidence            378999998775442             5789999976

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=87.95  E-value=0.8  Score=35.69  Aligned_cols=27  Identities=22%  Similarity=0.513  Sum_probs=24.3

Q ss_pred             Ccccc----ccchhccCCHHHHHHHHHhccC
Q psy12165        207 GIFRC----KKCVKVFVNPDIYKKHLKHSHT  233 (537)
Q Consensus       207 ~~~~C----~~C~~~f~~~~~l~~H~~~~h~  233 (537)
                      ..|.|    ..|+..+.+...+..|++..|+
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            46999    9999999999999999998774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=87.27  E-value=0.15  Score=43.98  Aligned_cols=48  Identities=25%  Similarity=0.564  Sum_probs=41.7

Q ss_pred             ecccchhhccChHHHHHHHhhcCCCCCCCCCCCCCCCCCccccccchhccCCHHHHHHHHHhccC
Q psy12165        169 ICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHT  233 (537)
Q Consensus       169 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  233 (537)
                      .|.+|+..|.....|.+|++..|                 |+|-+|.+...+.-.|..|...+|.
T Consensus        12 wcwycnrefddekiliqhqkakh-----------------fkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH-----------------FKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc-----------------ceeeeehhhhccCCCceeehhhhhh
Confidence            59999999999999999987654                 9999999998888889888776664

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=86.35  E-value=0.17  Score=51.12  Aligned_cols=144  Identities=21%  Similarity=0.322  Sum_probs=89.8

Q ss_pred             CccccccccccccChhHHHHhHh--hh-cC--Cccccc--cccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCC
Q psy12165        358 KPYACRICARLLGNGVKVSEHIK--LH-GE--HLVNCR--VCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDL  430 (537)
Q Consensus       358 ~~~~C~~C~~~f~~~~~l~~H~~--~H-~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~  430 (537)
                      .++.|..|...|.....|..|.+  .| ++  +++.|+  .|++.|.....+..|..+|.+..           ++.+..
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~  356 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSIS-----------PAKEKL  356 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCC-----------cccccc
Confidence            46889999999999999999998  68 77  899999  79999999999999999988853           233332


Q ss_pred             --CCCCCCChHHH----HHHHHhhcCCCCcccccc--cccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChh
Q psy12165        431 --CSKEWPSRKFM----WQHLIRSHKAVAGLACGV--CLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARP  502 (537)
Q Consensus       431 --C~~~f~~~~~l----~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~  502 (537)
                        +...+.....-    .......-.....+.+..  |...+.....+..|.. .|..   .....+.+..|...|...-
T Consensus       357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~  432 (467)
T COG5048         357 LNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHII-THLS---FRPYNCKNPPCSKSFNRHY  432 (467)
T ss_pred             ccCccccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccc-cccc---cCCcCCCCCcchhhccCcc
Confidence              22222211110    001001111222333322  5555555666666654 3433   1123566777788888777


Q ss_pred             HHHHHHhhhhCCCc
Q psy12165        503 KLESHLAVHVGLDK  516 (537)
Q Consensus       503 ~l~~H~~~h~g~~~  516 (537)
                      .|..|++.|.....
T Consensus       433 ~~~~~~~~~~~~~~  446 (467)
T COG5048         433 NLIPHKKIHTNHAP  446 (467)
T ss_pred             cccccccccccCCc
Confidence            77777777776554

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=86.17  E-value=0.47  Score=30.54  Aligned_cols=30  Identities=23%  Similarity=0.392  Sum_probs=26.6

Q ss_pred             CCCceeecccchhhccChHHHHHHHhhcCC
Q psy12165        163 FGESVHICHLCQKQFKQNWLLQKHKKTCKG  192 (537)
Q Consensus       163 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  192 (537)
                      .|+..+.|+-|+..|.....+.+|+...|+
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            378889999999999999999999976655

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.79  E-value=3.6  Score=31.73  Aligned_cols=21  Identities=19%  Similarity=0.325  Sum_probs=11.0

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy12165        454 GLACGVCLKISETYEALALHL  474 (537)
Q Consensus       454 ~~~C~~C~~~f~~~~~l~~H~  474 (537)
                      .|.|+.|...|--.=++-.|.
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe  101 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHE  101 (112)
T ss_pred             ceeCCCCCCccccccchhhhh
Confidence            455555555555555555554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.38  E-value=2.6  Score=32.42  Aligned_cols=21  Identities=14%  Similarity=0.324  Sum_probs=13.4

Q ss_pred             CcccCCCCCCCCChHHHHHHH
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHL  445 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~  445 (537)
                      .|+|+.|...|-..-++..|.
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe  101 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHE  101 (112)
T ss_pred             ceeCCCCCCccccccchhhhh
Confidence            466666666666666666664

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=80.57  E-value=0.45  Score=48.00  Aligned_cols=61  Identities=18%  Similarity=0.246  Sum_probs=34.0

Q ss_pred             CcccccccccccccCHHHHHHHHHhccccCCCCCCcccccchhcccCcHHHHHHHhhcCCCCCc
Q psy12165        265 EYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTN  328 (537)
Q Consensus       265 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  328 (537)
                      .+.+....|...+.....+..|...+.....  ..+.+..|...+.....+..|++ .|....+
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  446 (467)
T COG5048         386 KSETLSNSCIRNFKRDSNLSLHIITHLSFRP--YNCKNPPCSKSFNRHYNLIPHKK-IHTNHAP  446 (467)
T ss_pred             cccccccchhhhhccccccccccccccccCC--cCCCCCcchhhccCccccccccc-ccccCCc
Confidence            3444444455556555555555554443321  14566777777777777777776 4444333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	537
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		5e-06
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-04
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-04
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-04
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-04
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-04
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		6e-04
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		7e-04
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		7e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 75/196 (38%), Gaps = 35/196 (17%)
Query: 97  YVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVD 156
           Y C  C K +SRS HL +H  R H G     C  C K  S +  L +H   H        
Sbjct: 22  YACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHT------- 73
Query: 157 EPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVK 216
                  GE  + C  C K F Q   L+ H++T  G K              + C +C K
Sbjct: 74  -------GEKPYKCPECGKSFSQRANLRAHQRTHTGEK-------------PYACPECGK 113
Query: 217 VFVNPDIYKKHLK-HSHTKAY-CEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCK 274
            F      + H + H+  K Y C  C  +    ++ + LH  +  H   + YKC  P C 
Sbjct: 114 SFSQLAHLRAHQRTHTGEKPYKCPECGKS---FSREDNLHTHQRTHTGEKPYKC--PECG 168
Query: 275 KYFRTKLDCQKHCREH 290
           K F  +     H R H
Sbjct: 169 KSFSRRDALNVHQRTH 184

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 57/157 (36%), Gaps = 21/157 (13%)
Query: 359 PYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKE 417
           PYAC  C +       ++EH + H GE    C  CG  F  + +L  H   HT       
Sbjct: 21  PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG------ 74
Query: 418 QKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQA 477
                E P  C  C K +  R  +  H  R+H      AC  C K       L  H  + 
Sbjct: 75  -----EKPYKCPECGKSFSQRANLRAHQ-RTHTGEKPYACPECGKSFSQLAHLRAH-QRT 127
Query: 478 HPGYFAEEVDNP-TCEVCGRYHNARPKLESHLAVHVG 513
           H G      + P  C  CG+  +    L +H   H G
Sbjct: 128 HTG------EKPYKCPECGKSFSREDNLHTHQRTHTG 158

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 359 PYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           PYAC +  C R       +  HI++H G+    CR+C   F  +  L  H+  HT     
Sbjct: 4   PYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTG---- 59
Query: 416 KEQKPRPELPVTCDLCSKEWPS 437
                  E P  CD+C +++ +
Sbjct: 60  -------EKPFACDICGRKFAT 74

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 359 PYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           PYAC +  C R      +++ HI++H G+    CR+C   F     L  H+  HT     
Sbjct: 4   PYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG---- 59
Query: 416 KEQKPRPELPVTCDLCSKEW 435
                  E P  CD+C +++
Sbjct: 60  -------EKPFACDICGRKF 72

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 359 PYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           PYAC +  C R   +   ++ HI++H G+    CR+C   F     L  H+  HT     
Sbjct: 4   PYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG---- 59
Query: 416 KEQKPRPELPVTCDLCSKEW 435
                  E P  CD+C +++
Sbjct: 60  -------EKPFACDICGRKF 72

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 14/80 (17%)
Query: 359 PYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           PYAC +  C R       ++ HI++H G+    CR+C   F     L  H+  HT     
Sbjct: 4   PYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG---- 59
Query: 416 KEQKPRPELPVTCDLCSKEW 435
                  E P  CD+C +++
Sbjct: 60  -------EKPFACDICGRKF 72

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 14/80 (17%)
Query: 359 PYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           PYAC +  C R       ++ HI++H G+    CR+C   F     L  H+  HT     
Sbjct: 4   PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG---- 59
Query: 416 KEQKPRPELPVTCDLCSKEW 435
                  E P  CD+C +++
Sbjct: 60  -------EKPFACDICGRKF 72

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 359 PYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           PYAC +  C R      +++ HI++H G+    CR+C   F     L  H+  HT     
Sbjct: 4   PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG---- 59
Query: 416 KEQKPRPELPVTCDLCSKEW 435
                  E P  CD+C +++
Sbjct: 60  -------EKPFACDICGRKF 72

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 359 PYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           PYAC +  C R      +++ HI++H G+    CR+C   F     L  H+  HT     
Sbjct: 3   PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG---- 58
Query: 416 KEQKPRPELPVTCDLCSKEW 435
                  E P  CD+C +++
Sbjct: 59  -------EKPFACDICGRKF 71

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 359 PYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPET 415
           PYAC +  C R      +++ HI++H G+    CR+C   F     L  H+  HT     
Sbjct: 4   PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG---- 59
Query: 416 KEQKPRPELPVTCDLCSKEW 435
                  E P  CD+C +++
Sbjct: 60  -------EKPFACDICGRKF 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	537
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 7e-07
 Identities = 56/402 (13%), Positives = 119/402 (29%), Gaps = 118/402 (29%)

Query: 143 KHLIAHDNPNTEVD----------EPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKG 192
            H+I   +  +             E  + +F E V      +  +   +L+   K   + 
Sbjct: 52  DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL-----RINY--KFLMSPIKTEQRQ 104

Query: 193 PKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHSHTKAYCEVCITAPGYETKVEL 252
           P   T    E  +    R     +VF   ++ +        +A  E+    P     V L
Sbjct: 105 PSMMTRMYIEQRD----RLYNDNQVFAKYNVSRLQPYLKLRQALLEL---RP--AKNV-L 154

Query: 253 LHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYCNFCADLFTNR 312
           +  +               G  K   T +     C  +K          C     +F   
Sbjct: 155 IDGVL--------------GSGK---TWVALDV-CLSYKVQ--------CKMDFKIF--- 185

Query: 313 KKLWLHLKS--THKDLTNCMCSACFVVEDNLSALEAHV-----------AAKHKAIIKKP 359
              WL+LK+  + + +   +    + ++ N ++   H            A   + +  KP
Sbjct: 186 ---WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

Query: 360 YACRICARLLGNGVKVSEHIKLHGEHLVNCRV-----CGSIF---HSEPELKVHLEEHTD 411
           Y    C  +L N V+ ++         ++C++        +     +     + L+ H+ 
Sbjct: 243 Y--ENCLLVLLN-VQNAKAWNAFN---LSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 412 V---PETKE----------QKPRPEL----PVTCDLCS---KEWPSRKFMWQHLIRSHKA 451
                E K           Q    E+    P    + +   ++  +    W+H+      
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 452 VAGLACGVCLKISET---YEALALHLDQAHPGYFAEEVDNPT 490
               +    L+ +E    ++ L++         F      PT
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSV---------FPPSAHIPT 389

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 1e-06
 Identities = 66/491 (13%), Positives = 132/491 (26%), Gaps = 137/491 (27%)

Query: 18  KVFRDNLSLLK-HVEEEHPTMQRRYSCQ---------VH-------IILVLNTLLDDNL- 59
           +++ DN    K +V    P ++ R +           +          + L+  L   + 
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ 177

Query: 60  -------------------SLLKHVEEEHPTMQRRYSCQVDTMEAIKEHRKTEHAMYVCD 100
                              ++L+ +++    +   ++ + D    IK    +  A     
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 101 LCPKYYSRS----THLW--KHVNRVHKGHPDVTCRI------CSKVSSSRGHLEKHLIAH 148
           L  K Y        ++   K  N       +++C+I                   H+   
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAF-----NLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 149 DNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKK----TCKGPKRPTSPL---- 200
            +  T   +       E   +           +L  + +              +P     
Sbjct: 293 HHSMTLTPD-------EVKSLL--------LKYLDCRPQDLPREVLTT-----NPRRLSI 332

Query: 201 -PEPDEDGIFR--------CKK---CVKVFVN---PDIYKKHL-------KHSH--TKAY 236
             E   DG+          C K    ++  +N   P  Y+K           +H  T   
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392

Query: 237 CEVCITAPGYETK--VELLHHMKTEHKDNEEYKCLIPGCKKYFRTKLDCQKHCREHKTVT 294
             +       +    V  LH      K  +E    IP    Y   K+  +     H+++ 
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI--YLELKVKLENEYALHRSIV 450

Query: 295 SR--CPTNYCNFCADLFTNRKKLWL------HLKSTHKDLTNCMCSACFVVEDNLSALEA 346
                P  + +   DL       +       HLK+        +    F+   +   LE 
Sbjct: 451 DHYNIPKTFDSD--DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL---DFRFLE- 504

Query: 347 HVAAKHKAIIKKPYACRICAR---LLGNGVKVSEHIKLHGEHLVNCRVCGSI--FHSEPE 401
               K   I     A          L        +I  +       R+  +I  F  + E
Sbjct: 505 ---QK---IRHDSTAWNASGSILNTLQQLKFYKPYICDN--DPKYERLVNAILDFLPKIE 556

Query: 402 LKVHLEEHTDV 412
             +   ++TD+
Sbjct: 557 ENLICSKYTDL 567

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 44.4 bits (106), Expect = 4e-06
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 17/95 (17%)

Query: 97  YVCDL--CPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTE 154
           Y C +  C + +S+S  L +H+ R+H G     CRIC +  S   HL  H+  H    T 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTH----T- 58

Query: 155 VDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKT 189
                    GE    C +C ++F ++   ++H K 
Sbjct: 59  ---------GEKPFACDICGRKFARSDERKRHTKI 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 16/92 (17%)

Query: 97  YVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVD 156
           + C +C + +SRS HL  H+ R H G     C IC +  +     ++H            
Sbjct: 4   FQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQ-------- 54

Query: 157 EPQMNEFGESVHICHLCQKQFKQNWLLQKHKK 188
                       +    ++   +N+ L+    
Sbjct: 55  -------HILPILEDKVEELLSKNYHLENEVA 79

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 40.1 bits (95), Expect = 1e-04
 Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 15/93 (16%)

Query: 97  YVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVD 156
           + C++C K +SR   L  H  R H G     C+ C   ++    L KHL  H        
Sbjct: 9   HKCEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS------- 60

Query: 157 EPQMNEFGESVHICHLCQKQFKQNWLLQKHKKT 189
                   E    C +C    + +  L  H ++
Sbjct: 61  -------DERPFKCQICPYASRNSSQLTVHLRS 86

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 31/140 (22%)

Query: 97  YVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVD 156
             C  C K +    +L  H NR H G     C  C K    + +L +H            
Sbjct: 8   VECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEH------------ 54

Query: 157 EPQMNEF---GESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKK 213
             +        E V  C +CQ+ F++   L+ H  +  G   P            ++C  
Sbjct: 55  --EARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEM-P------------YKCSS 99

Query: 214 CVKVFVNPDIYKKHLKHSHT 233
           C + F+     + H+   H+
Sbjct: 100 CSQQFMQKKDLQSHMIKLHS 119

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 87  KEHRKTEHAMYVCDL--CPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKH 144
             +   +   Y C +  C + +SRS  L +H+ R+H G     CRIC +  S   HL  H
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTH 68

Query: 145 LIAH 148
           +  H
Sbjct: 69  IRTH 72

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 17/94 (18%)

Query: 97  YVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVD 156
             C++C K +    HL +H    H G    +C +C      +  +  H+ +HD       
Sbjct: 8   VACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHD------- 59

Query: 157 EPQMNEFGESV--HICHLCQKQFKQNWLLQKHKK 188
                  G     +IC  C K F +   L  H K
Sbjct: 60  -------GSVGKPYICQSCGKGFSRPDHLNGHIK 86

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 35/191 (18%), Positives = 52/191 (27%), Gaps = 50/191 (26%)

Query: 102 CPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMN 161
                            + +       + C +  S+   L  H+         V  P+ N
Sbjct: 3   SGSSGQPIKQELSC-KWIDEAQLSRPKKSCDRTFSTMHELVTHVTME-----HVGGPEQN 56

Query: 162 EFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKK--CVKVFV 219
                   C    K FK  + L  H +   G K P            F C    C K+F 
Sbjct: 57  NHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK-P------------FPCPFPGCGKIF- 102

Query: 220 NPDIYKKHLKHSHTKAYCEVCITAPGYETKVELLHHMKTEHKDNEEYKCLIPGCKKYFRT 279
                 ++LK                         H +T H   + +KC   GC + F  
Sbjct: 103 ---ARSENLK------------------------IHKRT-HTGEKPFKCEFEGCDRRFAN 134

Query: 280 KLDCQKHCREH 290
             D +KH   H
Sbjct: 135 SSDRKKHMHVH 145

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 5e-04
 Identities = 19/129 (14%), Positives = 35/129 (27%), Gaps = 24/129 (18%)

Query: 107 SRSTHLWKHVNRVHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGES 166
           S  +    +   +  G     C+ CS    +   L  H               MNE G  
Sbjct: 2   SSGSSGKLYG-SIFTGASKFRCKDCSAAYDTLVELTVH---------------MNETGHY 45

Query: 167 VHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKK 226
               H       + W   + +   +   +  +         + +C  C   F +      
Sbjct: 46  RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ-------KVLKCMYCGHSFESLQDLSV 98

Query: 227 HL-KHSHTK 234
           H+ K  H +
Sbjct: 99  HMIKTKHYQ 107

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	537
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.83
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.74
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.71
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.68
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.68
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.67
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.67
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.67
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.65
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.64
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.62
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.62
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.6
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.6
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.58
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.56
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.55
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.5
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.49
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.49
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.48
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.47
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.45
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.44
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.43
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.43
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.43
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.41
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.41
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.41
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.41
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.39
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.39
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.38
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.38
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.37
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.37
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.36
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.35
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.34
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.34
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.33
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.33
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.3
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.27
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.26
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.25
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.23
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.22
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.17
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.08
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.06
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.99
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.97
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.97
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.95
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.93
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.92
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.91
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.89
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.89
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.89
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.88
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.87
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.86
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.86
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.85
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.83
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.83
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.82
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.81
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.8
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.8
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.78
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.76
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.75
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.73
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.73
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.73
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.71
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.71
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.7
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.7
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.69
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.69
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.69
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.69
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.69
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.69
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.68
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.68
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.68
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.67
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.67
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.67
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.67
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.65
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.65
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.65
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.65
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.64
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.64
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.63
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.62
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.62
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.62
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.61
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.61
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.61
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.6
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.6
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.6
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.6
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.6
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.6
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.59
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.59
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.59
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.58
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.57
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.57
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.57
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.57
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.55
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.54
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.53
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.53
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.52
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.49
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.48
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.47
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.47
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.47
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.46
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.46
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.44
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.42
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.41
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.39
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.35
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.33
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.27
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.26
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.24
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.23
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.22
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.22
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.21
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.2
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.2
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.2
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.19
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.17
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.17
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.17
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.46
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.16
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.16
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.15
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.13
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.42
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.12
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.12
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.11
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.07
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.05
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.03
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.24
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.94
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.93
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.93
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.93
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.92
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.9
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.89
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.88
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.87
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.87
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.86
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.85
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.8
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.74
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.74
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.71
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.7
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.7
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.68
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.86
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.67
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.65
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.63
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.62
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.61
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.58
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.7
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.54
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.68
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.53
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.4
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.38
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.0
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.83
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.7
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.54
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.53
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.07
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.0
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.92
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.54
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.38
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.04
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	89.19
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.72
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	82.96
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.18
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	81.17
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	80.97

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.9e-35  Score=259.07  Aligned_cols=181  Identities=24%  Similarity=0.461  Sum_probs=131.2

Q ss_pred             HHHHHHhhcCCCCCccccCCcccccCCHHHHHHHHHhhccccCCCccccccccccccChhHHHHhHhhh-cCCccccccc
Q psy12165        314 KLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVC  392 (537)
Q Consensus       314 ~l~~H~~~~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~~C~~C  392 (537)
                      .|..|+. .|.++++|.|+.|++.|.+...|..|++.++.   +++|.|+.|++.|.+...|..|++.| ++++|.|++|
T Consensus         8 ~l~~h~~-~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   83 (190)
T 2i13_A            8 SSVAQAA-LEPGEKPYACPECGKSFSRSDHLAEHQRTHTG---EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC   83 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC------CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTT
T ss_pred             cchhhhh-hcCCCCCCcCCCCccccCCHHHHHHHHHHcCC---CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCccc
Confidence            4455554 45555556666666666666666666554333   47888999999999999999999888 8889999999


Q ss_pred             cccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHH
Q psy12165        393 GSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALAL  472 (537)
Q Consensus       393 ~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~  472 (537)
                      ++.|.+...|..|+++|++           +++|.|++|++.|.+...|..|+ ..|.++++|.|+.|++.|.+...|..
T Consensus        84 ~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~  151 (190)
T 2i13_A           84 GKSFSQRANLRAHQRTHTG-----------EKPYACPECGKSFSQLAHLRAHQ-RTHTGEKPYKCPECGKSFSREDNLHT  151 (190)
T ss_dssp             CCEESCHHHHHHHHHHHHT-----------CCCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             CCccCCHHHHHHHHHhcCC-----------CCCCcCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCCcccCCHHHHHH
Confidence            9999999999999999988           67899999999999999999997 78888999999999999999999999


Q ss_pred             HHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        473 HLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       473 H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      |++ .|.+     +++|.|++|++.|.++..|..|+++|+|+++
T Consensus       152 H~~-~H~~-----~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~  189 (190)
T 2i13_A          152 HQR-THTG-----EKPYKCPECGKSFSRRDALNVHQRTHTGKKT  189 (190)
T ss_dssp             HHH-HHHC-----CCCEECTTTCCEESSHHHHHHHHTTC-----
T ss_pred             HHH-hcCC-----CCCeECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            998 4555     6899999999999999999999999999875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.5e-33  Score=248.14  Aligned_cols=183  Identities=24%  Similarity=0.443  Sum_probs=134.5

Q ss_pred             HHHHHHHHhccccCCCCCCcccccchhcccCcHHHHHHHhhcCCCCCccccCCcccccCCHHHHHHHHHhhccccCCCcc
Q psy12165        281 LDCQKHCREHKTVTSRCPTNYCNFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPY  360 (537)
Q Consensus       281 ~~l~~H~~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~  360 (537)
                      ..|..|+..+.+..    +|.|+.|++.|.+...|..|++ .|.+..+|.|+.|++.|.+...|..|++.++.   +++|
T Consensus         7 ~~l~~h~~~~~~~~----~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~   78 (190)
T 2i13_A            7 SSSVAQAALEPGEK----PYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTHTG---EKPY   78 (190)
T ss_dssp             ----------------------------CCSSHHHHHGGG-CC---CCEECTTTCCEESSHHHHHHHHHHHHC---CCCE
T ss_pred             ccchhhhhhcCCCC----CCcCCCCccccCCHHHHHHHHH-HcCCCCCccCCCcCchhCCHHHHHHHHHhcCC---CCCc
Confidence            45666777766654    8888888888888888888887 67777888888888888888888888887665   4889


Q ss_pred             ccccccccccChhHHHHhHhhh-cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChH
Q psy12165        361 ACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRK  439 (537)
Q Consensus       361 ~C~~C~~~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~  439 (537)
                      .|++|++.|.+...|..|++.| ++++|.|++|++.|.+...|..|+++|++           +++|+|++|++.|.+..
T Consensus        79 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~  147 (190)
T 2i13_A           79 KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG-----------EKPYKCPECGKSFSRED  147 (190)
T ss_dssp             ECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC-----------CCCEECTTTCCEESCHH
T ss_pred             cCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC-----------CCCeECCCCCcccCCHH
Confidence            9999999999999999999988 88899999999999999999999999988           77899999999999999


Q ss_pred             HHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCc
Q psy12165        440 FMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNP  489 (537)
Q Consensus       440 ~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~  489 (537)
                      .|..|+ ..|.++++|.|++|++.|.+...|..|++ .|.+     ++||
T Consensus       148 ~L~~H~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~-----~k~~  190 (190)
T 2i13_A          148 NLHTHQ-RTHTGEKPYKCPECGKSFSRRDALNVHQR-THTG-----KKTS  190 (190)
T ss_dssp             HHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHT-TC-----------
T ss_pred             HHHHHH-HhcCCCCCeECCCCCCccCCHHHHHHHHH-hcCC-----CCCC
Confidence            999998 78889999999999999999999999988 6766     5664

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=7.4e-29  Score=218.08  Aligned_cols=166  Identities=22%  Similarity=0.353  Sum_probs=134.0

Q ss_pred             CCcccc--CCcccccCCHHHHHHHHHhhccccCCCcccc--ccccccccChhHHHHhHhhh-cCCccccc--cccccCCC
Q psy12165        326 LTNCMC--SACFVVEDNLSALEAHVAAKHKAIIKKPYAC--RICARLLGNGVKVSEHIKLH-GEHLVNCR--VCGSIFHS  398 (537)
Q Consensus       326 ~~~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~H-~~~~~~C~--~C~~~f~~  398 (537)
                      .++|.|  +.|++.|.+...|..|++.++.   +++|.|  +.|++.|.+...|..|+++| ++++|.|+  .|++.|.+
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTG---EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHC---CCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESC
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCC---CCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCC
Confidence            445555  4566666666666666655433   478888  78999999999999999888 88899999  89999999


Q ss_pred             hHHHHHHH-HhccCCCCCccCCCCCCCCccc--CCCCCCCCChHHHHHHHHhhcCCCCcccccc--cccccCCHHHHHHH
Q psy12165        399 EPELKVHL-EEHTDVPETKEQKPRPELPVTC--DLCSKEWPSRKFMWQHLIRSHKAVAGLACGV--CLKISETYEALALH  473 (537)
Q Consensus       399 ~~~L~~H~-~~h~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H  473 (537)
                      ...|..|+ +.|...          +.+|.|  +.|++.|.+...|..|+ ..|.++++|.|++  |++.|.+...|..|
T Consensus        87 ~~~l~~H~~~~h~~~----------~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~F~~~~~L~~H  155 (190)
T 1tf6_A           87 KANMKKHFNRFHNIK----------ICVYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRH  155 (190)
T ss_dssp             HHHHHHHHHTTSSTT----------TSCCEECSSSSCEECSSHHHHHHHH-GGGSSSCSSBCCSSSCCCBCSSHHHHHHH
T ss_pred             HHHHHHHHHHhcCCC----------cceeeCCCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCCchhcCHHHHHHH
Confidence            99999999 455321          568999  88999999999999997 7899999999987  99999999999999


Q ss_pred             HHhhCCCCcccccCCccccc---ccccccChhHHHHHHhhhhCC
Q psy12165        474 LDQAHPGYFAEEVDNPTCEV---CGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       474 ~~~~H~~~~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ++ .|.+        |+|+.   |++.|.+...|..|+++|+|+
T Consensus       156 ~~-~H~~--------~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          156 EK-VHAG--------YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HT-SSCS--------CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HH-HhCC--------CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            87 6653        88998   999999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=9.1e-28  Score=211.11  Aligned_cols=163  Identities=25%  Similarity=0.477  Sum_probs=98.4

Q ss_pred             CCCcccccccccccccCHHHHHHHHHhccccCCCCCCccc--ccchhcccCcHHHHHHHhhcCCCCCccccCCcccccCC
Q psy12165        263 NEEYKCLIPGCKKYFRTKLDCQKHCREHKTVTSRCPTNYC--NFCADLFTNRKKLWLHLKSTHKDLTNCMCSACFVVEDN  340 (537)
Q Consensus       263 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~  340 (537)
                      .++|.|.++.|++.|.+...|..|++.|.+..    +|.|  +.|++.|.+...|..|++ .|.++              
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~----~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~--------------   70 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEK----PFPCKEEGCEKGFTSLHHLTRHSL-THTGE--------------   70 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCC----SSCCSSTTCCCCCSSHHHHHHHHT-TTTTC--------------
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCC----CccCCCCCCChhhCCHHHHHHHHH-HccCC--------------
Confidence            44555533336666666666666655555443    5555  555555555555555555 34443              


Q ss_pred             HHHHHHHHHhhccccCCCccccc--cccccccChhHHHHhH-hhh--cCCcccc--ccccccCCChHHHHHHHHhccCCC
Q psy12165        341 LSALEAHVAAKHKAIIKKPYACR--ICARLLGNGVKVSEHI-KLH--GEHLVNC--RVCGSIFHSEPELKVHLEEHTDVP  413 (537)
Q Consensus       341 ~~~l~~H~~~~h~~~~~~~~~C~--~C~~~f~~~~~l~~H~-~~H--~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~  413 (537)
                                       ++|.|+  .|++.|.+...|..|+ +.|  ++++|.|  ++|++.|.+...|..|+++|++  
T Consensus        71 -----------------~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~--  131 (190)
T 1tf6_A           71 -----------------KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ--  131 (190)
T ss_dssp             -----------------CCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS--
T ss_pred             -----------------CceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC--
Confidence                             555555  5666666666666665 344  3556666  6666666666666666666666  


Q ss_pred             CCccCCCCCCCCcccCC--CCCCCCChHHHHHHHHhhcCCCCcccccc---cccccCCHHHHHHHHHh
Q psy12165        414 ETKEQKPRPELPVTCDL--CSKEWPSRKFMWQHLIRSHKAVAGLACGV---CLKISETYEALALHLDQ  476 (537)
Q Consensus       414 ~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~---C~~~f~~~~~l~~H~~~  476 (537)
                               ++||.|++  |++.|.+...|..|+ ..|.+   |.|..   |++.|.+...|..|++.
T Consensus       132 ---------~~~~~C~~~~C~k~F~~~~~L~~H~-~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~  186 (190)
T 1tf6_A          132 ---------QLPYECPHEGCDKRFSLPSRLKRHE-KVHAG---YPCKKDDSCSFVGKTWTLYLKHVAE  186 (190)
T ss_dssp             ---------SCSSBCCSSSCCCBCSSHHHHHHHH-TSSCS---CCCCSTTTCCCCCSCHHHHHHHHTT
T ss_pred             ---------CCCccCCCCCCCchhcCHHHHHHHH-HHhCC---CcCCCCCcCCCccccHHHHHHHHHh
Confidence                     55666665  666666666666666 55665   66666   66677766677777663

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=3.5e-26  Score=194.02  Aligned_cols=138  Identities=23%  Similarity=0.403  Sum_probs=111.3

Q ss_pred             ccccccccccccChhHHHHhHh---hh-cCCccccc-----cccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccC
Q psy12165        359 PYACRICARLLGNGVKVSEHIK---LH-GEHLVNCR-----VCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCD  429 (537)
Q Consensus       359 ~~~C~~C~~~f~~~~~l~~H~~---~H-~~~~~~C~-----~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~  429 (537)
                      +|.|+.|++.|.+...|..|++   +| ++++|.|+     .|++.|.+...|..|+++|++           +++|.|+
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~-----------~~~~~C~   71 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG-----------EKPHKCT   71 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC-----------CCCCCCC
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC-----------CCCccCC
Confidence            4555555555555555555555   23 45555554     455889999999999999988           6789998


Q ss_pred             C--CCCCCCChHHHHHHHHhhcCCCCcccccc--cccccCCHHHHHHHHHhhCCCCcccccCCccccc--ccccccChhH
Q psy12165        430 L--CSKEWPSRKFMWQHLIRSHKAVAGLACGV--CLKISETYEALALHLDQAHPGYFAEEVDNPTCEV--CGRYHNARPK  503 (537)
Q Consensus       430 ~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~--C~~~f~~~~~  503 (537)
                      +  |++.|.+...|..|+ ..|.++++|.|++  |++.|.+...|..|+...|.+     +++|+|++  |++.|.+...
T Consensus        72 ~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-----~~~~~C~~~~C~~~f~~~~~  145 (155)
T 2gli_A           72 FEGCRKSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN-----EKPYVCKLPGCTKRYTDPSS  145 (155)
T ss_dssp             STTCCCCCSSHHHHHHHH-HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS-----CCCEECCSTTTCCEESSHHH
T ss_pred             CCCCCCcccCHHHHHHHH-HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC-----CCCeeCCCCCCccccCCHHH
Confidence            5  999999999999998 6788999999998  999999999999998668877     78999988  9999999999


Q ss_pred             HHHHHhhhhC
Q psy12165        504 LESHLAVHVG  513 (537)
Q Consensus       504 l~~H~~~h~g  513 (537)
                      |..|+++|+|
T Consensus       146 L~~H~~~hhg  155 (155)
T 2gli_A          146 LRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHSCC
T ss_pred             HHHHHHhhcC
Confidence            9999999886

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=6.8e-25  Score=186.03  Aligned_cols=143  Identities=25%  Similarity=0.447  Sum_probs=116.4

Q ss_pred             CcccccchhcccCcHHHHHHHhh--cCCCCCccccCCcccccCCHHHHHHHHHhhccccCCCccccccccccccChhHHH
Q psy12165        299 TNYCNFCADLFTNRKKLWLHLKS--THKDLTNCMCSACFVVEDNLSALEAHVAAKHKAIIKKPYACRICARLLGNGVKVS  376 (537)
Q Consensus       299 ~~~C~~C~~~f~~~~~l~~H~~~--~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~C~~C~~~f~~~~~l~  376 (537)
                      +|.|+.|++.|.+...|..|++.  .|.+..+|.|++|                          .|..|++.|.+...|.
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c--------------------------~C~~c~~~f~~~~~l~   56 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG--------------------------GCSRELRPFKAQYMLV   56 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBT--------------------------TCTTTTCCCSSHHHHH
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCC--------------------------CccchhhhhhhHHHHH
Confidence            45555555555555555555553  2334344444333                          1445569999999999


Q ss_pred             HhHhhh-cCCcccccc--ccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCC--CCCCCCChHHHHHHHHhhcCC
Q psy12165        377 EHIKLH-GEHLVNCRV--CGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDL--CSKEWPSRKFMWQHLIRSHKA  451 (537)
Q Consensus       377 ~H~~~H-~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  451 (537)
                      .|++.| +++||.|++  |++.|.+...|..|+++|++           +++|.|++  |++.|.+...|..|+...|.+
T Consensus        57 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~  125 (155)
T 2gli_A           57 VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG-----------EKPYMCEHEGCSKAFSNASDRAKHQNRTHSN  125 (155)
T ss_dssp             HHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTT-----------CCCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             HHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCC-----------CCCeeCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            999998 889999986  99999999999999999998           77999998  999999999999998789999


Q ss_pred             CCcccccc--cccccCCHHHHHHHHHhhC
Q psy12165        452 VAGLACGV--CLKISETYEALALHLDQAH  478 (537)
Q Consensus       452 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H  478 (537)
                      +++|.|.+  |++.|.+...|..|++.+|
T Consensus       126 ~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          126 EKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            99999998  9999999999999999655

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=1.8e-24  Score=175.69  Aligned_cols=112  Identities=19%  Similarity=0.297  Sum_probs=100.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCccc
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLA  456 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  456 (537)
                      |..+| |+++|.|++||+.|.....|..|+++|++           ++||+|++|++.|.+...|..|+ ..|++++||.
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~-----------~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~   80 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSW-----------EKKYPCRYCEKVFPLAEYRTKHE-IHHTGERRYQ   80 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHC-----------CSCEECSSSSCEESSHHHHHHHH-HHHHTCCCEE
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCC-----------CCCeeCCccCeecccccchhhhc-cccCCCcccc
Confidence            33456 89999999999999999999999999998           78999999999999999999997 7899999999


Q ss_pred             ccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccCh
Q psy12165        457 CGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNAR  501 (537)
Q Consensus       457 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~  501 (537)
                      |+.|++.|.+...|..|++.+|+.......++|+|..|++.|...
T Consensus        81 C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           81 CLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             ESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            999999999999999999988876555556889999999988654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.1e-22  Score=165.30  Aligned_cols=115  Identities=30%  Similarity=0.527  Sum_probs=75.1

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHh--hcCCCCccccccc
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIR--SHKAVAGLACGVC  460 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~H~~~~~~~C~~C  460 (537)
                      ++++|.|++|++.|.+...|..|+++|++           +++|.|++|++.|.+...|..|+..  .|.++++|.|.+|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C   72 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTG-----------EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVC   72 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSS-----------CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSS
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCC-----------CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCC
Confidence            34566666666666666666666666666           4566777777777666677777643  3456666777777


Q ss_pred             ccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHh-hhhCC
Q psy12165        461 LKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLA-VHVGL  514 (537)
Q Consensus       461 ~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~g~  514 (537)
                      ++.|.+...|..|++ .|.+     ++||.|++|++.|.+...|..|++ .|.|+
T Consensus        73 ~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           73 QETFRRRMELRLHMV-SHTG-----EMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             CCEESSHHHHHHHHH-HHSS-----SCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             CCccCCHHHHHHHHH-HcCC-----CCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            777777777777766 3444     466777777777777777777765 34443

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=3.7e-22  Score=162.15  Aligned_cols=116  Identities=22%  Similarity=0.404  Sum_probs=105.0

Q ss_pred             CCCccccccccccccChhHHHHhHhhh-cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCC
Q psy12165        356 IKKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKE  434 (537)
Q Consensus       356 ~~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~  434 (537)
                      ++++|.|++|++.|.+...|..|+++| ++++|.|++|++.|.+...|..|++.++..        .++.+|.|++|++.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~--------~~~~~~~C~~C~~~   75 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN--------RSEQVFTCSVCQET   75 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCC--------SCCCCEECSSSCCE
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcC--------CCCCCeECCCCCCc
Confidence            368899999999999999999999998 889999999999999999999999975321        11678999999999


Q ss_pred             CCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCC
Q psy12165        435 WPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       435 f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      |.+...|..|+ ..|.++++|.|.+|++.|.+...|..|++..|++
T Consensus        76 f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           76 FRRRMELRLHM-VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             ESSHHHHHHHH-HHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             cCCHHHHHHHH-HHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            99999999998 7899999999999999999999999999988987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.87  E-value=2.3e-22  Score=163.28  Aligned_cols=115  Identities=21%  Similarity=0.397  Sum_probs=96.3

Q ss_pred             CCccccc--cccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccc--
Q psy12165        384 EHLVNCR--VCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGV--  459 (537)
Q Consensus       384 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--  459 (537)
                      +++|.|+  .|++.|.+...|..|+++| +           +++|.|++|++.|.+...|..|+ ..|.++++|.|.+  
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~-----------~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~   69 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-G-----------PRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEG   69 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-S-----------CCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTT
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-C-----------CCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCC
Confidence            5678898  8999999999999999888 4           56899999999999999999997 7899999999986  


Q ss_pred             cccccCCHHHHHHHHHhhCCCCcccccCCcccc--cccccccChhHHHHHHhhhhCCCcC
Q psy12165        460 CLKISETYEALALHLDQAHPGYFAEEVDNPTCE--VCGRYHNARPKLESHLAVHVGLDKS  517 (537)
Q Consensus       460 C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~g~~~~  517 (537)
                      |++.|.+...|..|++ .|.+     +++|.|+  .|++.|.+...|..|+++|+|+++.
T Consensus        70 C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           70 CGKRFSLDFNLRTHVR-IHTG-----DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCCEESCHHHHHHHHH-HHHC-----CCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             CcCccCCHHHHHHHHH-HhCC-----CCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            9999999999999998 5555     6899996  4999999999999999999998764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=4.1e-22  Score=160.55  Aligned_cols=111  Identities=23%  Similarity=0.492  Sum_probs=73.0

Q ss_pred             cCCcccccc--ccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccC--CCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        383 GEHLVNCRV--CGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCD--LCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       383 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      ++++|.|++  |++.|.+...|..|+++|.+           +++|.|+  .|++.|.+...|..|+ ..|.++++|.|.
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~   70 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG-----------EKPYQCDFKDCERRFSRSDQLKRHQ-RRHTGVKPFQCK   70 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT-----------TCCEECCSTTCCCEESSHHHHHHHH-HHHHCCCCEECT
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCC-----------CCCccCCCCCCcCccCCHHHHHHHH-HHcCCCCCccCC
Confidence            355666665  66666666666666666665           4566666  5666666666666665 456666667777


Q ss_pred             ccccccCCHHHHHHHHHhhCCCCcccccCCccc--ccccccccChhHHHHHHhhh
Q psy12165        459 VCLKISETYEALALHLDQAHPGYFAEEVDNPTC--EVCGRYHNARPKLESHLAVH  511 (537)
Q Consensus       459 ~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  511 (537)
                      .|++.|.+...|..|++ .|.+     +++|+|  +.|++.|.+...|..|+++|
T Consensus        71 ~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           71 TCQRKFSRSDHLKTHTR-THTG-----EKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             TTCCEESCHHHHHHHHH-HHHT-----CCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             ccCchhCCHHHHHHHHH-HhcC-----CCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            77777777777777766 3443     466777  56777777777777776665

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.84  E-value=2.9e-21  Score=155.52  Aligned_cols=107  Identities=25%  Similarity=0.526  Sum_probs=96.0

Q ss_pred             CCcccccc--ccccccChhHHHHhHhhh-cCCccccc--cccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCC
Q psy12165        357 KKPYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCR--VCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLC  431 (537)
Q Consensus       357 ~~~~~C~~--C~~~f~~~~~l~~H~~~H-~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C  431 (537)
                      +++|.|++  |++.|.+...|..|++.| ++++|.|+  .|++.|.+...|..|+++|++           +++|.|++|
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C   72 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG-----------VKPFQCKTC   72 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC-----------CCCEECTTT
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC-----------CCCccCCcc
Confidence            67899987  999999999999999988 88899998  699999999999999999888           678999999


Q ss_pred             CCCCCChHHHHHHHHhhcCCCCcccc--cccccccCCHHHHHHHHH
Q psy12165        432 SKEWPSRKFMWQHLIRSHKAVAGLAC--GVCLKISETYEALALHLD  475 (537)
Q Consensus       432 ~~~f~~~~~l~~H~~~~H~~~~~~~C--~~C~~~f~~~~~l~~H~~  475 (537)
                      ++.|.+...|..|+ ..|.++++|.|  +.|++.|.+...|..|++
T Consensus        73 ~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           73 QRKFSRSDHLKTHT-RTHTGEKPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             CCEESCHHHHHHHH-HHHHTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CchhCCHHHHHHHH-HHhcCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence            99999999999998 78888999999  789999999999999987

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=3.8e-21  Score=162.70  Aligned_cols=124  Identities=23%  Similarity=0.375  Sum_probs=97.4

Q ss_pred             CCccccccccccCCChHHHHHHHHh-ccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccc--c
Q psy12165        384 EHLVNCRVCGSIFHSEPELKVHLEE-HTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGV--C  460 (537)
Q Consensus       384 ~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C  460 (537)
                      +.+|.|.+|++.|.+...|..|++. |.+.......   ...+|.|++|++.|.+...|..|+ ..|.++++|.|.+  |
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~---~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH---VCYWEECPREGKSFKAKYKLVNHI-RVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSC---CCCBTTCTTSSCCCSSHHHHHHHT-HHHHCCCSEECSCTTT
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCc---cccccCCCCcccccCCHHHHHHHH-HhcCCCCcccCCcCCC
Confidence            5578888888888888888888887 5442111000   012388999999999999999997 6788888899988  9


Q ss_pred             ccccCCHHHHHHHHHhhCCCCcccccCCccccc--ccccccChhHHHHHHhhhhCCCcC
Q psy12165        461 LKISETYEALALHLDQAHPGYFAEEVDNPTCEV--CGRYHNARPKLESHLAVHVGLDKS  517 (537)
Q Consensus       461 ~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~g~~~~  517 (537)
                      ++.|.+...|..|++ .|.+     +++|.|++  |++.|.+...|..|+++|+|++++
T Consensus        99 ~~~f~~~~~L~~H~~-~h~~-----~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~  151 (155)
T 2rpc_A           99 GKIFARSENLKIHKR-THTG-----EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSG  151 (155)
T ss_dssp             CCEESCHHHHHHHHT-TTCS-----SCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCS
T ss_pred             CCccCCHHHHHHHHH-hhCC-----CCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            999999999999987 6666     68899987  999999999999999999988874

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.84  E-value=1.7e-21  Score=158.09  Aligned_cols=111  Identities=26%  Similarity=0.505  Sum_probs=86.3

Q ss_pred             CCccccc--cccccccChhHHHHhHhhhcCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCC--CC
Q psy12165        357 KKPYACR--ICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDL--CS  432 (537)
Q Consensus       357 ~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~--C~  432 (537)
                      +++|.|+  .|++.|.+...|..|+++|++++|.|++|++.|.+...|..|+++|++           +++|.|++  |+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~~~C~   71 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTG-----------EKPFQCTFEGCG   71 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSC-----------CCCEECCSTTCC
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCC-----------CCCeeCCCCCCc
Confidence            4678887  788888888888888888877788888888888888888888888877           66788875  88


Q ss_pred             CCCCChHHHHHHHHhhcCCCCccccc--ccccccCCHHHHHHHHHhhCCC
Q psy12165        433 KEWPSRKFMWQHLIRSHKAVAGLACG--VCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       433 ~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      +.|.+...|..|+ ..|.++++|.|+  .|++.|.+...|..|++ .|.+
T Consensus        72 ~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~-~H~~  119 (124)
T 1ubd_C           72 KRFSLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL-THAK  119 (124)
T ss_dssp             CEESCHHHHHHHH-HHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH-HHC-
T ss_pred             CccCCHHHHHHHH-HHhCCCCceECCCCCCCCccCCHHHHHHHHH-HHcc
Confidence            8888888888887 677788888885  48888888888888877 4544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=8.5e-21  Score=160.54  Aligned_cols=77  Identities=23%  Similarity=0.435  Sum_probs=38.7

Q ss_pred             cccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCC--CCCCCCChHHHHHHHHhhcCCCCcccccc--ccc
Q psy12165        387 VNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDL--CSKEWPSRKFMWQHLIRSHKAVAGLACGV--CLK  462 (537)
Q Consensus       387 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~  462 (537)
                      |.|++|++.|.+...|..|+++|++           +++|.|++  |++.|.+...|..|+ ..|.++++|.|.+  |++
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~k  130 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTG-----------EKPFPCPFPGCGKIFARSENLKIHK-RTHTGEKPFKCEFEGCDR  130 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHC-----------CCSEECSCTTTCCEESCHHHHHHHH-TTTCSSCSBCCSSTTCCC
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCC-----------CCcccCCcCCCCCccCCHHHHHHHH-HhhCCCCCccCCCCCCCC
Confidence            4455555555555555555555544           34455544  555555555555554 4454555555554  555


Q ss_pred             ccCCHHHHHHHHH
Q psy12165        463 ISETYEALALHLD  475 (537)
Q Consensus       463 ~f~~~~~l~~H~~  475 (537)
                      .|.+...|..|++
T Consensus       131 ~f~~~~~L~~H~~  143 (155)
T 2rpc_A          131 RFANSSDRKKHMH  143 (155)
T ss_dssp             CBSSHHHHHHSST
T ss_pred             ccCCHHHHHHHHH
Confidence            5555555555544

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.83  E-value=1.7e-21  Score=158.22  Aligned_cols=98  Identities=23%  Similarity=0.383  Sum_probs=53.7

Q ss_pred             CCccccccccccccChhHHHHhHhhh-cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCC
Q psy12165        357 KKPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEW  435 (537)
Q Consensus       357 ~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f  435 (537)
                      +++|+|++|++.|.+...|..|+++| +++||.|++|++.|.....|..|+++|++           ++||.|++|++.|
T Consensus        20 ek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-----------~k~~~C~~C~k~F   88 (133)
T 2lt7_A           20 RVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTG-----------ERRYQCLACGKSF   88 (133)
T ss_dssp             EEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHT-----------CCCEEESSSCCEE
T ss_pred             CcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCC-----------CccccCCCCCCCc
Confidence            45555555555555555555555555 55555555555555555555555555555           4455555555555


Q ss_pred             CChHHHHHHHHhhcCC-----CCcccccccccccC
Q psy12165        436 PSRKFMWQHLIRSHKA-----VAGLACGVCLKISE  465 (537)
Q Consensus       436 ~~~~~l~~H~~~~H~~-----~~~~~C~~C~~~f~  465 (537)
                      .+...|..|++..|.+     .++|+|..|++.|.
T Consensus        89 ~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           89 INYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             SSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             CCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            5555555555333321     23455555555554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.74  E-value=1e-17  Score=131.45  Aligned_cols=91  Identities=19%  Similarity=0.384  Sum_probs=82.5

Q ss_pred             CCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCccccccccccc
Q psy12165        420 PRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHN  499 (537)
Q Consensus       420 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~  499 (537)
                      ...+++|.|++|++.|.+...|..|+ ..|.++++|.|.+|++.|.+...|..|++ .|.+     +++|.|++|++.|.
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~   84 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDHLRDHRY-IHSK-----EKPFKCQECGKGFC   84 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHH-HHHCCSCCCBCSSSCCBCSCHHHHHHHGG-GSCC-----CCTTSCSSSCCCCS
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCCCCccchhCCHHHHHHHHH-HhCC-----CCCeECCCcCCccc
Confidence            34467899999999999999999998 78999999999999999999999999987 6766     68999999999999


Q ss_pred             ChhHHHHHHhhhhCCCcC
Q psy12165        500 ARPKLESHLAVHVGLDKS  517 (537)
Q Consensus       500 ~~~~l~~H~~~h~g~~~~  517 (537)
                      +...|..|+++|+|++++
T Consensus        85 ~~~~L~~H~~~H~~~~~~  102 (106)
T 2ee8_A           85 QSRTLAVHKTLHMQTSSP  102 (106)
T ss_dssp             SHHHHHHHHHHTTSCCCC
T ss_pred             CHHHHHHHHHHhCCCCCC
Confidence            999999999999998874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=5e-18  Score=130.60  Aligned_cols=88  Identities=24%  Similarity=0.466  Sum_probs=80.5

Q ss_pred             CCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccCh
Q psy12165        422 PELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNAR  501 (537)
Q Consensus       422 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~  501 (537)
                      ++++|.|++|++.|.+...|..|+ ..|.++++|.|..|++.|.+...|..|++ .|.+     +++|+|++|++.|.+.
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~~   77 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSD-----ERPFKCQICPYASRNS   77 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHG-GGCCCCCSEECSSSCCEESSHHHHHHHHH-HSCC-----CCCEECSSSSCEESSH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHH-HhcCCCCCEeCCCCCCccCCHHHHHHHHH-HhCC-----CCCccCCCCCCccCCH
Confidence            367899999999999999999998 78999999999999999999999999998 5665     6899999999999999


Q ss_pred             hHHHHHHhhhhCCCc
Q psy12165        502 PKLESHLAVHVGLDK  516 (537)
Q Consensus       502 ~~l~~H~~~h~g~~~  516 (537)
                      ..|..|+++|+|++.
T Consensus        78 ~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           78 SQLTVHLRSHTGDSG   92 (96)
T ss_dssp             HHHHHHHTTCCSCCC
T ss_pred             HHHHHHHHHhcCCCC
Confidence            999999999999865

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=9.4e-18  Score=131.75  Aligned_cols=83  Identities=19%  Similarity=0.329  Sum_probs=44.3

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccccc
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLK  462 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  462 (537)
                      ++++|.|++|++.|.....|..|+++|..             +|.|++|++.|.....|..|+ . |.++++|.|.+|++
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~-------------~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~   77 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCRN-------------AAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMR   77 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHHH-------------SBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTE
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCCC-------------CccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccc
Confidence            44555555555555555555555555432             455555555555555555554 2 55555555555555


Q ss_pred             ccCCHHHHHHHHHhhCCC
Q psy12165        463 ISETYEALALHLDQAHPG  480 (537)
Q Consensus       463 ~f~~~~~l~~H~~~~H~~  480 (537)
                      .|.+...|..|++.+|.+
T Consensus        78 ~f~~~~~L~~H~~~~H~~   95 (107)
T 1wjp_A           78 TFKSSFSIWRHQVEVHNQ   95 (107)
T ss_dssp             ECSSHHHHHHHHHHTSCC
T ss_pred             hhCCHHHHHHHHHHHcCC
Confidence            555555555555444544

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=4.6e-18  Score=126.53  Aligned_cols=82  Identities=24%  Similarity=0.473  Sum_probs=65.2

Q ss_pred             CcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHH
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKL  504 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l  504 (537)
                      ||.|++|++.|.+...|..|+ ..|.++++|.|..|++.|.+...|..|++ .|.+     +++|.|++|++.|.+...|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTG-----EKPHKCQVCGKAFSQSSNL   73 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHTCCCEECSSSCCEESSHHHHHHHHH-HHHT-----CCCEECTTTSCEESSHHHH
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCCCCCeeCCcCChhhCCHHHHHHHHH-HhcC-----CCCCcCCCcchhhCChHHH
Confidence            477888888888888888887 56777788888888888888888888887 4444     5788888888888888888


Q ss_pred             HHHHhhhhC
Q psy12165        505 ESHLAVHVG  513 (537)
Q Consensus       505 ~~H~~~h~g  513 (537)
                      ..|+++|+|
T Consensus        74 ~~H~~~H~g   82 (82)
T 2kmk_A           74 ITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHhhCC
Confidence            888888876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.71  E-value=6.4e-18  Score=128.26  Aligned_cols=86  Identities=22%  Similarity=0.557  Sum_probs=70.8

Q ss_pred             CCCcccC--CCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccC
Q psy12165        423 ELPVTCD--LCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNA  500 (537)
Q Consensus       423 ~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~  500 (537)
                      ++||.|+  .|++.|.+...|..|+ ..|.++++|.|..|++.|.+...|..|++ .|.+     +++|.|++|++.|.+
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~   74 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTG-----EKPFACDICGRKFAR   74 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHH-HHHC-----CCCEECTTTCCEESS
T ss_pred             CCceECCCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCcccCCHHHHHHHHH-HcCC-----CCCccCCCCCchhCC
Confidence            5678887  5888888888888887 67888888888889999998899999987 4554     588999999999999


Q ss_pred             hhHHHHHHhhhhCCC
Q psy12165        501 RPKLESHLAVHVGLD  515 (537)
Q Consensus       501 ~~~l~~H~~~h~g~~  515 (537)
                      ...|..|+++|+|++
T Consensus        75 ~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           75 SDERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHHHHGGGGC--
T ss_pred             HHHHHHHHHHhcccC
Confidence            999999999998875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.70  E-value=6.1e-17  Score=126.97  Aligned_cols=80  Identities=30%  Similarity=0.528  Sum_probs=41.9

Q ss_pred             CCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccc
Q psy12165        384 EHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKI  463 (537)
Q Consensus       384 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~  463 (537)
                      +++|.|.+|++.|.....|..|+++|++           +++|.|++|++.|.+...|..|+ ..|.++++|.|.+|++.
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~   82 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTD-----------ERPYTCDICHKAFRRQDHLRDHR-YIHSKEKPFKCQECGKG   82 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCC-----------SCCCBCSSSCCBCSCHHHHHHHG-GGSCCCCTTSCSSSCCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCC-----------CCCcCCCCccchhCCHHHHHHHH-HHhCCCCCeECCCcCCc
Confidence            3445555555555555555555555544           34455555555555555555554 44555555555555555


Q ss_pred             cCCHHHHHHHHH
Q psy12165        464 SETYEALALHLD  475 (537)
Q Consensus       464 f~~~~~l~~H~~  475 (537)
                      |.+...|..|++
T Consensus        83 f~~~~~L~~H~~   94 (106)
T 2ee8_A           83 FCQSRTLAVHKT   94 (106)
T ss_dssp             CSSHHHHHHHHH
T ss_pred             ccCHHHHHHHHH
Confidence            555555555554

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.9e-17  Score=125.27  Aligned_cols=87  Identities=22%  Similarity=0.410  Sum_probs=60.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChh
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARP  502 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~  502 (537)
                      +++|.|++|++.|.+...|..|+ ..|.++++|.|..|++.|.+...|..|++.++..    ..++|+|++|++.|.+..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS----VGKPYICQSCGKGFSRPD   79 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHH-HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCC----CCSSBCCSSSCCCBSSHH
T ss_pred             CCCeECCCCCCccCChHHHHHHH-HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCC----CCCceECCCccchhCCHH
Confidence            56677777777777777777776 5677777777777777777777777777643321    126777777777777777


Q ss_pred             HHHHHHh-hhhCC
Q psy12165        503 KLESHLA-VHVGL  514 (537)
Q Consensus       503 ~l~~H~~-~h~g~  514 (537)
                      .|..|++ +|.|.
T Consensus        80 ~L~~H~~~~H~~~   92 (95)
T 2yt9_A           80 HLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHHTSCCC
T ss_pred             HHHHHHHHhcCCC
Confidence            7777774 56654

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=4.6e-17  Score=124.86  Aligned_cols=85  Identities=31%  Similarity=0.546  Sum_probs=39.8

Q ss_pred             CCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCC--Ccccccccc
Q psy12165        384 EHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAV--AGLACGVCL  461 (537)
Q Consensus       384 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~--~~~~C~~C~  461 (537)
                      +++|.|++|++.|.+...|..|+++|++           +++|.|++|++.|.+...|..|+ ..|.++  ++|.|..|+
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~~~C~~C~   72 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSG-----------EKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKPYICQSCG   72 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCS-----------SCSEECSSSCCEESCHHHHHHHH-HHHCCCCCSSBCCSSSC
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCC-----------CCCCcCCCCCCccCCHHHHHHHH-HHhcCCCCCceECCCcc
Confidence            3444444444444444444444444444           33444444444444444444444 333333  445555555


Q ss_pred             cccCCHHHHHHHHHhhCCC
Q psy12165        462 KISETYEALALHLDQAHPG  480 (537)
Q Consensus       462 ~~f~~~~~l~~H~~~~H~~  480 (537)
                      +.|.+...|..|++..|++
T Consensus        73 ~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           73 KGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             CCBSSHHHHHHHHHHTSCC
T ss_pred             chhCCHHHHHHHHHHhcCC
Confidence            5555555555554444443

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=9.2e-17  Score=123.43  Aligned_cols=81  Identities=28%  Similarity=0.536  Sum_probs=54.4

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccccc
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLK  462 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  462 (537)
                      ++++|.|++|++.|.+...|..|+++|++           +++|.|++|++.|.+...|..|+ ..|.++++|.|.+|++
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~   72 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTG-----------VKPYKCKTCDYAAADSSSLNKHL-RIHSDERPFKCQICPY   72 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCC-----------CCSEECSSSCCEESSHHHHHHHH-HHSCCCCCEECSSSSC
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCC-----------CCCEeCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCC
Confidence            45566666666666666666666666665           45666666666666666666665 5666666677777777


Q ss_pred             ccCCHHHHHHHHH
Q psy12165        463 ISETYEALALHLD  475 (537)
Q Consensus       463 ~f~~~~~l~~H~~  475 (537)
                      .|.+...|..|++
T Consensus        73 ~f~~~~~l~~H~~   85 (96)
T 2dmd_A           73 ASRNSSQLTVHLR   85 (96)
T ss_dssp             EESSHHHHHHHHT
T ss_pred             ccCCHHHHHHHHH
Confidence            7777777777766

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.68  E-value=5.6e-17  Score=122.98  Aligned_cols=80  Identities=23%  Similarity=0.514  Sum_probs=38.5

Q ss_pred             CCccccc--cccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccc
Q psy12165        384 EHLVNCR--VCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCL  461 (537)
Q Consensus       384 ~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  461 (537)
                      ++||.|+  .|++.|.....|..|+++|.+           +++|.|+.|++.|.+...|..|+ ..|.++++|.|..|+
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~   69 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTG-----------QKPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICG   69 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHC-----------CCCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCC-----------CCCccCCCCCcccCCHHHHHHHH-HHcCCCCCccCCCCC
Confidence            3444444  245555444445555444444           33455555555555555555554 344444455555555


Q ss_pred             cccCCHHHHHHHHH
Q psy12165        462 KISETYEALALHLD  475 (537)
Q Consensus       462 ~~f~~~~~l~~H~~  475 (537)
                      +.|.+...|..|++
T Consensus        70 ~~f~~~~~l~~H~~   83 (90)
T 1a1h_A           70 RKFARSDERKRHTK   83 (90)
T ss_dssp             CEESSHHHHHHHHG
T ss_pred             chhCCHHHHHHHHH
Confidence            55555555555544

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=7.4e-18  Score=134.38  Aligned_cols=95  Identities=21%  Similarity=0.350  Sum_probs=59.7

Q ss_pred             hHHHHhHhhh-cCCccccccccccCCChHHHHHHHHh--ccCCCCCccCCCCCCCC-cccCCCCCCC--CChHHHHHHHH
Q psy12165        373 VKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEE--HTDVPETKEQKPRPELP-VTCDLCSKEW--PSRKFMWQHLI  446 (537)
Q Consensus       373 ~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~~~~~~~~~~-~~C~~C~~~f--~~~~~l~~H~~  446 (537)
                      ..|..|+++| +++||.|++|++.|.....|..|+++  |.+           .++ +.|++|++.|  .....|..|+ 
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~-----------~~~~~~C~~C~~~f~f~~~~~l~~H~-   72 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR-----------DDNHETDNNNPKRWSKPRKRSLLEME-   72 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCB-----------CSCCCCCCCCCSCCSSCCCCCCCCCC-
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccc-----------cCCCccCCCCCcccccccHHHHHHHh-
Confidence            4456666666 66667777777777777777777666  433           222 3466666666  6666666665 


Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCC
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHP  479 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  479 (537)
                      ..|.++++|.|.+|++.|.+...|..|++.+|.
T Consensus        73 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           73 GKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             CSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred             hccCCCcceECCCCCCccCCHHHHHHHHHHhCC
Confidence            556666666666666666666666666665443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=2.3e-18  Score=137.34  Aligned_cols=100  Identities=15%  Similarity=0.098  Sum_probs=88.1

Q ss_pred             hHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhh--cCCCCcc-ccccccccc--CCHHHHHHH
Q psy12165        399 EPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRS--HKAVAGL-ACGVCLKIS--ETYEALALH  473 (537)
Q Consensus       399 ~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~--H~~~~~~-~C~~C~~~f--~~~~~l~~H  473 (537)
                      ...|..|+++|++           ++||.|++|++.|.+...|..|+ ..  |.+.+++ .|..|++.|  .+...|..|
T Consensus         4 ~~~l~~H~~~H~~-----------~~~~~C~~C~k~f~~~~~L~~H~-~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H   71 (115)
T 2dmi_A            4 GSSGKLYGSIFTG-----------ASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKRWSKPRKRSLLEM   71 (115)
T ss_dssp             CCCCCCCCCCCCC-----------CCSEEBSSSSCEESSHHHHHHHH-HHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCC
T ss_pred             chhhhhheeeeCC-----------CCCEECCccCchhcCHHHHHHHH-HHhCccccCCCccCCCCCcccccccHHHHHHH
Confidence            4457788888888           78999999999999999999998 45  6666665 599999998  899999999


Q ss_pred             HHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        474 LDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       474 ~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ++ .|.+     ++||.|++|++.|.+...|..|+++|+....
T Consensus        72 ~~-~H~~-----~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           72 EG-KEDA-----QKVLKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CC-SCCC-----CSSCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             hh-ccCC-----CcceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            87 6776     7999999999999999999999999987654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=4.5e-17  Score=127.83  Aligned_cols=89  Identities=22%  Similarity=0.426  Sum_probs=68.3

Q ss_pred             CCccccccccccccChhHHHHhHhhhcCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCC
Q psy12165        357 KKPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWP  436 (537)
Q Consensus       357 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~  436 (537)
                      +++|.|++|++.|.....|..|+++| .++|.|++|++.|.....|..|++ |++           +++|+|++|++.|.
T Consensus        14 ~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~C~~C~~~f~~~~~l~~H~~-H~~-----------~~~~~C~~C~~~f~   80 (107)
T 1wjp_A           14 KEVYQCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHES-KCE-----------YKKLTCLECMRTFK   80 (107)
T ss_dssp             CCCCBCTTTCCBCSSHHHHHHHHHHH-HHSBCCTTTCCCBSSHHHHHHHHH-HCS-----------TGGGEEGGGTEECS
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHC-CCCccCCCCCCccCCHHHHHHHHH-cCC-----------CCCccCccccchhC
Confidence            56777777777777777777777777 457888888888888888888874 766           66788888888888


Q ss_pred             ChHHHHHHHHhhcCCCCccccc
Q psy12165        437 SRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       437 ~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      ....|..|++..|.++++|.|.
T Consensus        81 ~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           81 SSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             SHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CHHHHHHHHHHHcCCCCCCCCC
Confidence            8888888875578887777664

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.67  E-value=5.8e-17  Score=120.51  Aligned_cols=78  Identities=28%  Similarity=0.524  Sum_probs=43.5

Q ss_pred             ccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISE  465 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  465 (537)
                      ||.|++|++.|.....|..|+++|.+           +++|.|+.|++.|.+...|..|+ ..|.++++|.|..|++.|.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~   68 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD-----------TRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQVCGKAFS   68 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT-----------CCCEECSSSCCEESSHHHHHHHH-HHHHTCCCEECTTTSCEES
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC-----------CCCeeCCcCChhhCCHHHHHHHH-HHhcCCCCCcCCCcchhhC
Confidence            34555555555555555555555554           44555555555555555555554 4555555555555555555


Q ss_pred             CHHHHHHHHH
Q psy12165        466 TYEALALHLD  475 (537)
Q Consensus       466 ~~~~l~~H~~  475 (537)
                      +...|..|++
T Consensus        69 ~~~~l~~H~~   78 (82)
T 2kmk_A           69 QSSNLITHSR   78 (82)
T ss_dssp             SHHHHHHHHH
T ss_pred             ChHHHHHHHH
Confidence            5555555555

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.65  E-value=3.8e-16  Score=120.97  Aligned_cols=86  Identities=24%  Similarity=0.421  Sum_probs=78.4

Q ss_pred             CCCCCcccCC--CCCCCCChHHHHHHHHhhcCCCCccccc--ccccccCCHHHHHHHHHhhCCCCcccccCCcccccccc
Q psy12165        421 RPELPVTCDL--CSKEWPSRKFMWQHLIRSHKAVAGLACG--VCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGR  496 (537)
Q Consensus       421 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~  496 (537)
                      ...++|.|+.  |++.|.+...|..|+ ..|.++++|.|.  .|++.|.+...|..|++ .|.+     +++|.|++|++
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~   83 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTG-----AKPFQCGVCNR   83 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHH-HHHSCCCCEECCSSSCCCEESSHHHHHHHHH-HHTS-----CCSCBCSSSCC
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHH-HHhCCCCCeeCCCCCCCCccCCHHHHHHHHH-HhCC-----CCCeECCCCcC
Confidence            4467899997  999999999999998 789999999996  59999999999999998 5665     68999999999


Q ss_pred             cccChhHHHHHHhhhhC
Q psy12165        497 YHNARPKLESHLAVHVG  513 (537)
Q Consensus       497 ~f~~~~~l~~H~~~h~g  513 (537)
                      .|.+...|..|+++|+|
T Consensus        84 ~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           84 SFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             BCSSHHHHHHHHHHHCC
T ss_pred             ccCCHHHHHHHHHHhCC
Confidence            99999999999999986

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.2e-16  Score=124.69  Aligned_cols=86  Identities=21%  Similarity=0.419  Sum_probs=73.1

Q ss_pred             CCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccC
Q psy12165        421 RPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNA  500 (537)
Q Consensus       421 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~  500 (537)
                      .++++|.| .|++.|.+...|..|+ ..|.++++|.|.+|++.|.+...|..|++ .|.+     +++|.|++|++.|.+
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~   77 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTG-----IKPYECNICAKRFMW   77 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHT-TTCC-----CCCEECSSSCCEESC
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHH-HHcCCCcCccCCCCCcccCCHHHHHHHHH-HcCC-----CCCeeCCCCcchhcC
Confidence            34778999 8999999899999997 67888888999999999999999999987 5655     688999999999999


Q ss_pred             hhHHHHHHhhhhCC
Q psy12165        501 RPKLESHLAVHVGL  514 (537)
Q Consensus       501 ~~~l~~H~~~h~g~  514 (537)
                      ...|..|+++|++.
T Consensus        78 ~~~l~~H~~~~~~~   91 (110)
T 2csh_A           78 RDSFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccc
Confidence            99999999888864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=4.1e-16  Score=123.11  Aligned_cols=83  Identities=22%  Similarity=0.542  Sum_probs=62.4

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccccc
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLK  462 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~  462 (537)
                      ++++|.| .|++.|.....|..|++.|.+           +++|.|++|++.|.+...|..|+ ..|.++++|.|.+|++
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~   73 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLG-----------LRPYGCGVCGKKFKMKHHLVGHM-KIHTGIKPYECNICAK   73 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSC-----------CCSEECTTTSCEESSSHHHHHHH-TTTCCCCCEECSSSCC
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCC-----------CcCccCCCCCcccCCHHHHHHHH-HHcCCCCCeeCCCCcc
Confidence            5667777 777777777777777777776           56777777777777777777776 6777777777777777


Q ss_pred             ccCCHHHHHHHHHhhC
Q psy12165        463 ISETYEALALHLDQAH  478 (537)
Q Consensus       463 ~f~~~~~l~~H~~~~H  478 (537)
                      .|.+...|..|++.+|
T Consensus        74 ~f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           74 RFMWRDSFHRHVTSCT   89 (110)
T ss_dssp             EESCHHHHHHHHHHHH
T ss_pred             hhcCHHHHHHHHHHcc
Confidence            7777777777777554

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.62  E-value=2e-16  Score=107.51  Aligned_cols=57  Identities=26%  Similarity=0.483  Sum_probs=44.1

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        452 VAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       452 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      |+||.|..|++.|.....|..|++ .|++     ++||.|++|+++|.+.+.|..|+++|+|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~-~Ht~-----ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRR-AHLG-----YRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHH-HHHT-----CCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHH-HhCC-----CcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            577777777777777777777776 5766     67788888888888888888888887775

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.60  E-value=6.8e-16  Score=116.64  Aligned_cols=83  Identities=25%  Similarity=0.454  Sum_probs=73.1

Q ss_pred             CCCcccCC--CCCCCCChHHHHHHHHhhcCCCCccccc--ccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccc
Q psy12165        423 ELPVTCDL--CSKEWPSRKFMWQHLIRSHKAVAGLACG--VCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYH  498 (537)
Q Consensus       423 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f  498 (537)
                      ..+|.|+.  |++.|.+...|..|+ ..|.++++|.|+  .|++.|.+...|..|++ .|.+     +++|.|+.|++.|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f   75 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTG-----HRPFQCQKCDRAF   75 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHH-TTSCSSCCEECCSTTTCCEESSHHHHHHHHH-HHHC-----CCCEECSSSSCEE
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCCcCCCCCCCCCccCCHHHHHHHHH-HcCC-----CCCccCCCCCccc
Confidence            45799999  999999999999998 789899999997  59999999999999987 5655     6899999999999


Q ss_pred             cChhHHHHHHhhhh
Q psy12165        499 NARPKLESHLAVHV  512 (537)
Q Consensus       499 ~~~~~l~~H~~~h~  512 (537)
                      .+...|..|+++|.
T Consensus        76 ~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           76 SRSDHLALHMKRHF   89 (89)
T ss_dssp             SSHHHHHHHGGGGC
T ss_pred             CCHHHHHHHHHhhC
Confidence            99999999999884

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.60  E-value=1.2e-16  Score=120.35  Aligned_cols=82  Identities=18%  Similarity=0.331  Sum_probs=53.6

Q ss_pred             CCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhH
Q psy12165        424 LPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPK  503 (537)
Q Consensus       424 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~  503 (537)
                      +||.|++|++.|.+...|..|+ ..|.++++|.|..|++.|.+...|..|++.+|       ..+|.|+.|++.|.+...
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-------~~~~~c~~C~~~f~~~~~   73 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQH-------ILPILEDKVEELLSKNYH   73 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCCccCCHHHHHHHHHHhC-------CCcchHHHHHHHHHHHhh
Confidence            4566666666666666666665 45666666666666666666666666666544       256667777777766666


Q ss_pred             HHHHHhhhhC
Q psy12165        504 LESHLAVHVG  513 (537)
Q Consensus       504 l~~H~~~h~g  513 (537)
                      |..|++.+++
T Consensus        74 L~~H~~~~h~   83 (88)
T 1llm_C           74 LENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHH
T ss_pred             hHHHHHHHHH
Confidence            7777665553

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.59  E-value=9.9e-16  Score=104.09  Aligned_cols=54  Identities=28%  Similarity=0.699  Sum_probs=25.1

Q ss_pred             CccccccccccccChhHHHHhHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        358 KPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       358 ~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +||+|++|+++|.....|..|+++| +++||.|++||+.|...+.|..|+++|++
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            4444444444444444444444444 44444444444444444444444444444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.58  E-value=3.3e-16  Score=117.91  Aligned_cols=83  Identities=19%  Similarity=0.361  Sum_probs=70.9

Q ss_pred             CCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccc
Q psy12165        384 EHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKI  463 (537)
Q Consensus       384 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~  463 (537)
                      ++||.|++|++.|.....|..|+++|++           ++||.|+.|++.|.+...|..|+...|  ..+|.|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~-----------~~~~~C~~C~k~f~~~~~L~~H~~~h~--~~~~~c~~C~~~   67 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG-----------EKPFACDICGRKFARSDERKRHRDIQH--ILPILEDKVEEL   67 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC-----------CCCEECTTTCCEESSHHHHHHHHHHHT--HHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC-----------CCCccCCCCCCccCCHHHHHHHHHHhC--CCcchHHHHHHH
Confidence            4688899999999999999999998888           678999999999999999999984444  378899999999


Q ss_pred             cCCHHHHHHHHHhhCC
Q psy12165        464 SETYEALALHLDQAHP  479 (537)
Q Consensus       464 f~~~~~l~~H~~~~H~  479 (537)
                      |.+...|..|++..|.
T Consensus        68 f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           68 LSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHHH
Confidence            9999999999988774

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.56  E-value=7.8e-15  Score=113.49  Aligned_cols=81  Identities=23%  Similarity=0.601  Sum_probs=47.1

Q ss_pred             CCcccccc--ccccccChhHHHHhHhhh-cCCccccc--cccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCC
Q psy12165        357 KKPYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCR--VCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLC  431 (537)
Q Consensus       357 ~~~~~C~~--C~~~f~~~~~l~~H~~~H-~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C  431 (537)
                      .++|.|.+  |++.|.+...|..|++.| ++++|.|+  .|++.|.....|..|+++|++           +++|.|++|
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C   81 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG-----------AKPFQCGVC   81 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS-----------CCSCBCSSS
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC-----------CCCeECCCC
Confidence            34566654  666666666666666655 55556664  366666666666666666555           445666666


Q ss_pred             CCCCCChHHHHHHHHhhc
Q psy12165        432 SKEWPSRKFMWQHLIRSH  449 (537)
Q Consensus       432 ~~~f~~~~~l~~H~~~~H  449 (537)
                      ++.|.+...|..|+ ..|
T Consensus        82 ~~~f~~~~~l~~H~-~~H   98 (100)
T 2ebt_A           82 NRSFSRSDHLALHM-KRH   98 (100)
T ss_dssp             CCBCSSHHHHHHHH-HHH
T ss_pred             cCccCCHHHHHHHH-HHh
Confidence            66666666666665 444

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.55  E-value=4.9e-15  Score=111.86  Aligned_cols=77  Identities=25%  Similarity=0.597  Sum_probs=38.2

Q ss_pred             Ccccccc--ccccccChhHHHHhHhhh-cCCccccc--cccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCC
Q psy12165        358 KPYACRI--CARLLGNGVKVSEHIKLH-GEHLVNCR--VCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCS  432 (537)
Q Consensus       358 ~~~~C~~--C~~~f~~~~~l~~H~~~H-~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~  432 (537)
                      ++|.|++  |++.|.+...|..|++.| ++++|.|+  .|++.|.....|..|+++|++           +++|.|+.|+
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~   72 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG-----------HRPFQCQKCD   72 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHC-----------CCCEECSSSS
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCC-----------CCCccCCCCC
Confidence            3445554  555555555555555544 44445554  355555555555555555444           3445555555


Q ss_pred             CCCCChHHHHHHH
Q psy12165        433 KEWPSRKFMWQHL  445 (537)
Q Consensus       433 ~~f~~~~~l~~H~  445 (537)
                      +.|.+...|..|+
T Consensus        73 ~~f~~~~~l~~H~   85 (89)
T 2wbs_A           73 RAFSRSDHLALHM   85 (89)
T ss_dssp             CEESSHHHHHHHG
T ss_pred             cccCCHHHHHHHH
Confidence            5555555555554

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.50  E-value=1.1e-14  Score=108.90  Aligned_cols=78  Identities=22%  Similarity=0.288  Sum_probs=47.8

Q ss_pred             Cccc--CCCCCCCCChHHHHHHHHhhcCCCCcccccc--cccccCCHHHHHHHHHhhCCCCcccccCCccccc---cccc
Q psy12165        425 PVTC--DLCSKEWPSRKFMWQHLIRSHKAVAGLACGV--CLKISETYEALALHLDQAHPGYFAEEVDNPTCEV---CGRY  497 (537)
Q Consensus       425 ~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~---C~~~  497 (537)
                      ||.|  +.|++.|.+...|..|+ ..|.++++|.|+.  |++.|.+...|..|++. |.+        |.|+.   |++.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~--------~~C~~~~~C~~~   70 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAG--------YPCKKDDSCSFV   70 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-HHS--------EECCSCSSCCCE
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHH-hCC--------CCCCCCCCCCCc
Confidence            3566  55666666666666665 5566666666655  66666666666666653 321        66666   6666


Q ss_pred             ccChhHHHHHHhhhh
Q psy12165        498 HNARPKLESHLAVHV  512 (537)
Q Consensus       498 f~~~~~l~~H~~~h~  512 (537)
                      |.+...|..|+++|+
T Consensus        71 f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           71 GKTWTLYLKHVAECH   85 (85)
T ss_dssp             ESSHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHhcC
Confidence            666666666666553

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.49  E-value=2.3e-14  Score=107.10  Aligned_cols=77  Identities=27%  Similarity=0.581  Sum_probs=54.7

Q ss_pred             cccc--ccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCC--CCCCCCChHHHHHHHHhhcCCCCcccccc--
Q psy12165        386 LVNC--RVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDL--CSKEWPSRKFMWQHLIRSHKAVAGLACGV--  459 (537)
Q Consensus       386 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--  459 (537)
                      ||.|  +.|++.|.....|..|+++|++           +++|.|+.  |++.|.+...|..|+ ..|.+   |.|..  
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~---~~C~~~~   65 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ-----------QLPYECPHEGCDKRFSLPSRLKRHE-KVHAG---YPCKKDD   65 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT-----------TCCEECCSTTCCCEESSHHHHHHHH-HHHHS---EECCSCS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC-----------CCCeeCCCCCCcCccCCHHHHHHHH-HHhCC---CCCCCCC
Confidence            4667  6677777777777777777776           56677766  777777777777776 55555   77777  


Q ss_pred             -cccccCCHHHHHHHHHhh
Q psy12165        460 -CLKISETYEALALHLDQA  477 (537)
Q Consensus       460 -C~~~f~~~~~l~~H~~~~  477 (537)
                       |++.|.+...|..|++.+
T Consensus        66 ~C~~~f~~~~~l~~H~~~h   84 (85)
T 2j7j_A           66 SCSFVGKTWTLYLKHVAEC   84 (85)
T ss_dssp             SCCCEESSHHHHHHHHHHC
T ss_pred             CCCCccCCHHHHHHHHHhc
Confidence             777777777777777643

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=4.1e-14  Score=103.97  Aligned_cols=68  Identities=25%  Similarity=0.544  Sum_probs=46.2

Q ss_pred             CCcccccc--ccccccChhHHHHhHh-hh-cCCcccccc--ccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCC
Q psy12165        357 KKPYACRI--CARLLGNGVKVSEHIK-LH-GEHLVNCRV--CGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDL  430 (537)
Q Consensus       357 ~~~~~C~~--C~~~f~~~~~l~~H~~-~H-~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~  430 (537)
                      +++|.|..  |++.|.+...|..|++ .| ++++|.|++  |++.|.....|..|+++|++           +++|.|++
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-----------~~~~~C~~   73 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD-----------TRDYICEF   73 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHT-----------SCCCSCCS
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCC-----------CCCeeCCC
Confidence            45666665  7777777777777766 56 666677766  77777777777777776666           55677777


Q ss_pred             CCCCC
Q psy12165        431 CSKEW  435 (537)
Q Consensus       431 C~~~f  435 (537)
                      |++.|
T Consensus        74 C~k~F   78 (79)
T 2dlk_A           74 SGPSS   78 (79)
T ss_dssp             SSCCC
T ss_pred             CCCCC
Confidence            76666

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.8e-14  Score=107.99  Aligned_cols=79  Identities=20%  Similarity=0.331  Sum_probs=35.4

Q ss_pred             HhHhhh-cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcc
Q psy12165        377 EHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGL  455 (537)
Q Consensus       377 ~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~  455 (537)
                      .|+++| +++||.|++|++.|.....|..|++.|+...       ..+++|.|++|++.|.....|..|+ ..|.++.++
T Consensus         5 ~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~-------~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~~~   76 (86)
T 1x6h_A            5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN-------FVPAAFVCSKCGKTFTRRNTMARHA-DNCAGPDGV   76 (86)
T ss_dssp             CCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS-------CCCCCEECSSSCCEESCHHHHHHHH-HHCCCCCSC
T ss_pred             cccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc-------CCCcceECCCCCChhCCHHHHHHHH-HHccCCCCc
Confidence            344444 4444555555555555555555544443310       0013444444444444444444444 444444444


Q ss_pred             cccccccc
Q psy12165        456 ACGVCLKI  463 (537)
Q Consensus       456 ~C~~C~~~  463 (537)
                      .|..|+..
T Consensus        77 ~~~~~~~~   84 (86)
T 1x6h_A           77 EGENSGPS   84 (86)
T ss_dssp             CCCCCCCC
T ss_pred             ccCCCCCC
Confidence            44444443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4e-14  Score=104.07  Aligned_cols=70  Identities=21%  Similarity=0.444  Sum_probs=56.1

Q ss_pred             CCCcccCC--CCCCCCChHHHHHHHHhhcCCCCcccccc--cccccCCHHHHHHHHHhhCCCCcccccCCcccccccccc
Q psy12165        423 ELPVTCDL--CSKEWPSRKFMWQHLIRSHKAVAGLACGV--CLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYH  498 (537)
Q Consensus       423 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f  498 (537)
                      +++|.|+.  |++.|.+...|..|++..|.++++|.|..  |++.|.+...|..|++ .|.+     +++|.|++|+++|
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C~k~F   78 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSD-----TRDYICEFSGPSS   78 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHH-HHHT-----SCCCSCCSSSCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHH-HhCC-----CCCeeCCCCCCCC
Confidence            56788886  88888888888888744788888888887  8888888888888887 5555     6788888888877

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=4.3e-14  Score=99.72  Aligned_cols=64  Identities=14%  Similarity=0.313  Sum_probs=54.7

Q ss_pred             HhhcCCCCcccccccccccCCHHHHHHHHHhhC-CCCcccccCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        446 IRSHKAVAGLACGVCLKISETYEALALHLDQAH-PGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       446 ~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H-~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ...|+++++|.|+.|++.|.+...|..|++..| .+     +++|+|+.|++.|.+...|..|+++|+|+
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~-----~~~~~C~~C~k~f~~~~~L~~H~~~~H~i   66 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN-----VKVYPCPFCFKEFTRKDNMTAHVKIIHKI   66 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSS-----CCCEECTTTCCEESCHHHHHHHHHHHTC-
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCC-----CcCeECCCCCCccCCHHHHHHHHHHHcCC
Confidence            357888899999999999999999999998667 45     68999999999999999999999999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=5e-14  Score=105.49  Aligned_cols=80  Identities=26%  Similarity=0.404  Sum_probs=52.3

Q ss_pred             HHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCC---CcccccccccccCCHHHHHHHHHhhC
Q psy12165        402 LKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAV---AGLACGVCLKISETYEALALHLDQAH  478 (537)
Q Consensus       402 L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~---~~~~C~~C~~~f~~~~~l~~H~~~~H  478 (537)
                      |..|+++|++           +++|.|++|++.|.....|..|++..|...   ++|.|..|++.|.+...|..|++ .|
T Consensus         3 ~~~H~~~H~~-----------~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~-~h   70 (86)
T 1x6h_A            3 SGSSGRTHTG-----------EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD-NC   70 (86)
T ss_dssp             TTCCSTTCCC-----------CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHH-HC
T ss_pred             cccccceecC-----------CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHH-Hc
Confidence            3456666666           567777777777777777777764444443   56777777777777777777776 44


Q ss_pred             CCCcccccCCcccccccccc
Q psy12165        479 PGYFAEEVDNPTCEVCGRYH  498 (537)
Q Consensus       479 ~~~~~~~~~~~~C~~C~~~f  498 (537)
                      .+     ++++.|..|+.+|
T Consensus        71 ~~-----~~~~~~~~~~~~~   85 (86)
T 1x6h_A           71 AG-----PDGVEGENSGPSS   85 (86)
T ss_dssp             CC-----CCSCCCCCCCCCC
T ss_pred             cC-----CCCcccCCCCCCC
Confidence            44     4667777776654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=2.6e-13  Score=103.07  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=53.8

Q ss_pred             cccChhHHHHhHhhh-cCCccccccccccC-CChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHH
Q psy12165        368 LLGNGVKVSEHIKLH-GEHLVNCRVCGSIF-HSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHL  445 (537)
Q Consensus       368 ~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  445 (537)
                      +|.....|..|.+.| ++++|.|++|++.| .....|..|+++| +           +++|.|++|++.|.....|..|+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~-----------~k~~~C~~Cgk~F~~~~~L~~H~   82 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K-----------QEMFTCHHCGKQLRSLAGMKYHV   82 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-C-----------CCCCCCSSSCCCCSSHHHHHHHH
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C-----------CCCeECCCCCCeeCCHHHHHHHh
Confidence            455666677777766 67777777777777 7777777777777 5           56777777777777777777774


Q ss_pred             HhhcCCCCccc
Q psy12165        446 IRSHKAVAGLA  456 (537)
Q Consensus       446 ~~~H~~~~~~~  456 (537)
                      ...|+++..|.
T Consensus        83 ~~~H~~~p~~~   93 (96)
T 2ctd_A           83 MANHNSLPSGP   93 (96)
T ss_dssp             HHHTCCCSSCS
T ss_pred             HHhcCCCCCCC
Confidence            36776554443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.3e-13  Score=105.09  Aligned_cols=69  Identities=23%  Similarity=0.364  Sum_probs=42.4

Q ss_pred             CCCCcccCCCCCCCCChHHHHHHHHhhc---CCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCccccccc
Q psy12165        422 PELPVTCDLCSKEWPSRKFMWQHLIRSH---KAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCG  495 (537)
Q Consensus       422 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H---~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~  495 (537)
                      +++||.|+.|++.|.....|..|++..|   .+++||.|..|++.|.....|..|+...|++     ++||.|.++.
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htg-----ekpy~C~~~~   86 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG-----EENFKLTMVK   86 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTT-----CCCEEEEECC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCC-----CCCeeCCccc
Confidence            3556666666666666666666664356   4456666666666666666666663235655     5666666543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=7.8e-14  Score=106.27  Aligned_cols=71  Identities=15%  Similarity=0.197  Sum_probs=48.3

Q ss_pred             cCCccccccccccCCChHHHHHHHH-hccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccc
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLE-EHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCL  461 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  461 (537)
                      |++||.|+.||+.|.....|..|++ +|++..        +++||.|++|++.|.....|..|+...|++++||.|.++.
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~--------~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVV--------LNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCC--------CSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCC--------CCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            5677777777777777777777776 363200        0457777777777777777777733677777777777643

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=4.1e-14  Score=108.53  Aligned_cols=77  Identities=16%  Similarity=0.207  Sum_probs=60.2

Q ss_pred             CCCChHHHHHHHHhhcCCCCcccccccccccC-CHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhh
Q psy12165        434 EWPSRKFMWQHLIRSHKAVAGLACGVCLKISE-TYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       434 ~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~-~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      .+.....+..|+ ..|.++++|.|..|++.|. +...|..|++.++..     +++|.|++|++.|.++..|..|+++|+
T Consensus         5 s~~~~~~~~~h~-~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~-----~~~~~C~~C~k~F~~~~~L~~H~~~h~   78 (98)
T 2gqj_A            5 SSGPGGPEEQWQ-RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKL-----QDALKCQHCRKQFKSKAGLNYHTMAEH   78 (98)
T ss_dssp             CCCCCCSCSHHH-HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHH-----HHHHSCSSSCCCCSCHHHHHHHHHHHS
T ss_pred             CCCCCCcHHHHH-HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCC-----CCCEECCCCCCccCCHHHHHHHHHHHc
Confidence            344555667776 7888888888888888888 888888888754431     478888888888888888888888888


Q ss_pred             CCCc
Q psy12165        513 GLDK  516 (537)
Q Consensus       513 g~~~  516 (537)
                      |+++
T Consensus        79 ~~kp   82 (98)
T 2gqj_A           79 SAKP   82 (98)
T ss_dssp             CSCS
T ss_pred             CCCC
Confidence            8776

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=4.9e-14  Score=102.88  Aligned_cols=68  Identities=19%  Similarity=0.320  Sum_probs=48.5

Q ss_pred             HHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        443 QHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       443 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      .|+ ..|+++++|.|..|++.|.+...|..|++..|.+    +.++|+|++|++.|.+...|..|+++|++..
T Consensus         5 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~----~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            5 SSG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE----NVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCC-CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS----SCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             ccc-cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCC----CCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            454 6777777777777777777777777777656654    1267777777777777777777777766654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2e-13  Score=99.55  Aligned_cols=62  Identities=23%  Similarity=0.336  Sum_probs=37.2

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTC  491 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C  491 (537)
                      +++|.|++|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|++ .|.+     ++||+|
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~-----~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHR-RTHTGEKPYKCDECGKAFIQRSHLIGHHR-VHTG-----SGPSSG   77 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHH-TTTCCSCSEECSSSCCEESSHHHHHHHGG-GSCC-----CCCCCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHH-HHcCCCcCeeCCCCCCccCCHHHHHHHHH-HhCC-----CCCCCC
Confidence            45566666666666666666665 45666666666666666666666666655 4544     455655

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2.4e-13  Score=97.10  Aligned_cols=64  Identities=19%  Similarity=0.209  Sum_probs=55.1

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCCcC
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDKS  517 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~~  517 (537)
                      .|.++++|.|..|++.|.+...|..|++ .|.+     +++|+|++|++.|.+...|..|+++|+|+++.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHER-IHCT-----DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHG-GGCC-----SCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHH-HcCC-----CCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            4678888999999999999999999987 5666     68899999999999999999999999988763

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.41  E-value=1.5e-13  Score=111.69  Aligned_cols=51  Identities=24%  Similarity=0.327  Sum_probs=27.8

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHh
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQ  476 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  476 (537)
                      ++||.|++|++.|.....|..|+ ..|  ++||.|..|++.|.+...|..|++.
T Consensus        72 ~~~~~C~~C~k~f~~~~~l~~H~-~~H--~~~~~C~~C~k~f~~~~~l~~H~~~  122 (129)
T 2wbt_A           72 ISQFVCPLCLMPFSSSVSLKQHI-RYT--EHTKVCPVCKKEFTSTDSALDHVCK  122 (129)
T ss_dssp             HCSEECTTTCCEESSHHHHHHHH-HHT--CCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCeECCCCCcccCCHhHHHHHH-HHC--CCCCCCCCCCcccCCHHHHHHHHHH
Confidence            34555555555555555555554 344  4555555555555555555555553

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=3e-13  Score=97.10  Aligned_cols=64  Identities=22%  Similarity=0.320  Sum_probs=54.4

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      .+|.++++|.|.+|++.|.+...|..|++ .|.+     +++|+|++|++.|.+...|..|+++|+|...
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~-----~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTG-----EKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHH-GGGC-----SCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHH-hcCC-----CCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            46788889999999999999999999987 5655     6889999999999999999999999988643

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.39  E-value=3.4e-13  Score=97.51  Aligned_cols=63  Identities=24%  Similarity=0.409  Sum_probs=44.6

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      .+.++++|.|..|++.|.+...|..|++ .|.+     +++|+|++|++.|.+...|..|+++|+|+++
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~-----~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKT-VHTG-----EKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHH-HHCC-----CCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHH-HcCC-----CCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            4556667777777777777777777776 4544     5677777777777777777777777777664

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.38  E-value=7.9e-14  Score=113.35  Aligned_cols=69  Identities=17%  Similarity=0.402  Sum_probs=53.4

Q ss_pred             CChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        436 PSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       436 ~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      .....|..|+  .|.+++||.|..|++.|.....|..|++ .|       ++||.|++|++.|.+...|..|+++|+|+
T Consensus        58 ~~~~~l~~h~--~h~~~~~~~C~~C~k~f~~~~~l~~H~~-~H-------~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           58 DESSYLYRLL--ASKAISQFVCPLCLMPFSSSVSLKQHIR-YT-------EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTHHHHHHHH--HHHHHCSEECTTTCCEESSHHHHHHHHH-HT-------CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHH--HhCCCCCeECCCCCcccCCHhHHHHHHH-HC-------CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            4566666665  4777888888888888888888888887 45       26788888888888888888888888876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=1.3e-12  Score=95.24  Aligned_cols=63  Identities=25%  Similarity=0.424  Sum_probs=42.3

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      .+.++++|.|..|++.|.+...|..|++ .|.+     +++|+|++|++.|.....|..|+++|+|+++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p   74 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRR-THTG-----EKPYKCDECGKAFIQRSHLIGHHRVHTGSGP   74 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCC-----SCSEECSSSCCEESSHHHHHHHGGGSCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHH-HcCC-----CcCeeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            3445666777777777777777777765 4554     5667777777777777777777777777665

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=2.4e-13  Score=104.22  Aligned_cols=80  Identities=20%  Similarity=0.268  Sum_probs=70.0

Q ss_pred             cCCChHHHHHHHHhhcCCCCCccccccCCccc-ChHHHHHHHHhcCCCCCCCCccccccCC-CceeecccchhhccChHH
Q psy12165        105 YYSRSTHLWKHVNRVHKGHPDVTCRICSKVSS-SRGHLEKHLIAHDNPNTEVDEPQMNEFG-ESVHICHLCQKQFKQNWL  182 (537)
Q Consensus       105 ~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~~~~~~~~~~-~~~~~C~~C~~~f~~~~~  182 (537)
                      .+.....+..|+ ..|.++++|.|++|++.|. ....|..|++.|+              + +++|.|.+|++.|.....
T Consensus         5 s~~~~~~~~~h~-~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~--------------~~~~~~~C~~C~k~F~~~~~   69 (98)
T 2gqj_A            5 SSGPGGPEEQWQ-RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQ--------------KLQDALKCQHCRKQFKSKAG   69 (98)
T ss_dssp             CCCCCCSCSHHH-HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHH--------------HHHHHHSCSSSCCCCSCHHH
T ss_pred             CCCCCCcHHHHH-HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHc--------------CCCCCEECCCCCCccCCHHH
Confidence            355566677887 7899999999999999999 9999999999996              5 889999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCC
Q psy12165        183 LQKHKKTCKGPKRPTSP  199 (537)
Q Consensus       183 l~~H~~~h~~~~~~~~~  199 (537)
                      |..|++.|+++++....
T Consensus        70 L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           70 LNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             HHHHHHHHSCSCSSCCC
T ss_pred             HHHHHHHHcCCCCCCCC
Confidence            99999999988764433

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=1.4e-13  Score=100.47  Aligned_cols=67  Identities=22%  Similarity=0.428  Sum_probs=47.0

Q ss_pred             HHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHHHhhcCCC-CcccccccccccCCHHHHHHHHHhhCCC
Q psy12165        403 KVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHLIRSHKAV-AGLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       403 ~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      .+|+++|++           ++||.|++|++.|.+...|..|+...|.++ ++|.|..|++.|.+...|..|++.+|+.
T Consensus         4 ~~H~~~H~~-----------~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            4 GSSGRTHSG-----------EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCSC-----------CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CccccccCC-----------CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            345566665           567777777777777777777765566654 6777777777777777777777766665

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=5.1e-13  Score=97.94  Aligned_cols=57  Identities=23%  Similarity=0.422  Sum_probs=35.5

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCC
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      .++|.|++|++.|.+...|..|+ +.|++++||.|.+|++.|.+...|.+|++..|++
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHL-RLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHH-HTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCEECCCCCCCcCcHHHHhhhh-hhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            44566666666666666666665 5566666666666666666666666666555654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=6.2e-13  Score=100.92  Aligned_cols=74  Identities=20%  Similarity=0.355  Sum_probs=61.3

Q ss_pred             CCCCChHHHHHHHHhhcCCCCccccccccccc-CCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHH-Hhh
Q psy12165        433 KEWPSRKFMWQHLIRSHKAVAGLACGVCLKIS-ETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESH-LAV  510 (537)
Q Consensus       433 ~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f-~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~  510 (537)
                      ..|.....|..|. ..|.++++|.|..|++.| .+...|..|++ .| +     +++|.|.+|++.|..+..|..| +++
T Consensus        14 ~~~~~~~~~~~~~-~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~-----~k~~~C~~Cgk~F~~~~~L~~H~~~~   85 (96)
T 2ctd_A           14 PVYAAGSLEEQWY-LEIVDKGSVSCPTCQAVGRKTIEGLKKHME-NC-K-----QEMFTCHHCGKQLRSLAGMKYHVMAN   85 (96)
T ss_dssp             CSSCTTCHHHHHH-HHHHHTSCEECTTTCSCEESSHHHHHHHHH-HH-C-----CCCCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             CCCCCchHHHHHH-HHhcCCCCcCCCCCCCCcccCHHHHHHHHH-HH-C-----CCCeECCCCCCeeCCHHHHHHHhHHh
Confidence            3567777788886 677788889999999999 88999999988 45 6     6889999999999999999999 888


Q ss_pred             hhCC
Q psy12165        511 HVGL  514 (537)
Q Consensus       511 h~g~  514 (537)
                      |++.
T Consensus        86 H~~~   89 (96)
T 2ctd_A           86 HNSL   89 (96)
T ss_dssp             TCCC
T ss_pred             cCCC
Confidence            8764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=1e-12  Score=94.92  Aligned_cols=52  Identities=19%  Similarity=0.368  Sum_probs=25.8

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      +++|+|+.|++.|.+...|..|+ ..|.++++|.|..|++.|.+...|..|++
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   66 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFNRPANLKTHTR   66 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHH-HHHCCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             CCCeECCCCCceeCCHHHHHHHH-HHcCCCCCEECCCCCchhCCHHHHHHHHH
Confidence            34455555555555555555554 44444445555555555555555555544

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=2.2e-12  Score=94.57  Aligned_cols=63  Identities=19%  Similarity=0.259  Sum_probs=42.3

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHH-hhhhCCC
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHL-AVHVGLD  515 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~g~~  515 (537)
                      ..+...++|.|++|++.|.+...|.+|++ .|.+     ++||.|++|++.|.++..|..|+ ++|+++.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~-----~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLR-LLHA-----AQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHH-TTSC-----SSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhh-hccC-----CCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34555666777777777777777777776 4544     56777777777777777777775 4566553

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.33  E-value=1.1e-12  Score=89.40  Aligned_cols=56  Identities=18%  Similarity=0.316  Sum_probs=40.2

Q ss_pred             cccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        454 GLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       454 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      ||.|..|++.|.+...|..|++ .|.+     +++|.|+.|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-THTD-----VRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSS-----CCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-hcCC-----CCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            4677777777777777777776 4554     567777777777777777777777777665

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.33  E-value=6.8e-13  Score=90.39  Aligned_cols=56  Identities=27%  Similarity=0.443  Sum_probs=30.4

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhC
Q psy12165        452 VAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       452 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      +++|.|..|++.|.+...|..|++ .|.+     ++||.|++|++.|.+...|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLR-THTG-----EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHH-HHHC-----CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHH-HcCC-----CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            345566666666666666666655 3433     4556666666666666666666665553

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.30  E-value=1.9e-12  Score=88.13  Aligned_cols=53  Identities=25%  Similarity=0.588  Sum_probs=25.7

Q ss_pred             CccccccccccccChhHHHHhHhhh-cCCccccccccccCCChHHHHHHHHhcc
Q psy12165        358 KPYACRICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHT  410 (537)
Q Consensus       358 ~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~  410 (537)
                      ++|.|++|++.|.+...|..|+++| +++||.|++|++.|.....|..|+++|+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4455555555555555555555544 4445555555555555555555554443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=1.7e-12  Score=93.10  Aligned_cols=52  Identities=27%  Similarity=0.395  Sum_probs=25.0

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      +++|+|++|++.|.....|..|+ ..|.++++|.|.+|++.|.+...|..|++
T Consensus        12 ~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   63 (72)
T 1x6e_A           12 EKPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNSGLINHQR   63 (72)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-HGGGCSCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCccCCCCCCccCCHHHHHHHH-HhcCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            34444444444444444444444 34444444444444444444444444444

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=4.4e-12  Score=87.28  Aligned_cols=55  Identities=24%  Similarity=0.617  Sum_probs=33.5

Q ss_pred             CcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCC
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      ||.|+.|++.|.+...|..|+ ..|.++++|.|..|++.|.+...|..|++..|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHH-HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            466666666666666666665 4566666666666666666666666665445554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=5.2e-12  Score=90.03  Aligned_cols=63  Identities=27%  Similarity=0.317  Sum_probs=46.8

Q ss_pred             hcCCCCCccccccCCcccChHHHHHHHHhcCCCCCCCCccccccCCCceeecccchhhccChHHHHHHHhhcCCCCC
Q psy12165        119 VHKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKR  195 (537)
Q Consensus       119 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  195 (537)
                      .|.++++|.|++|++.|.+...|..|++.|.              ++++|+|++|++.|.....|..|++.|+++++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~--------------~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHC--------------TDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGC--------------CSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcC--------------CCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            3566677777777777777777777777775              56777777777777777777777777776653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=1.1e-12  Score=94.54  Aligned_cols=68  Identities=22%  Similarity=0.350  Sum_probs=54.8

Q ss_pred             HHHHHHHHhhcCCCCccccc--ccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhh
Q psy12165        439 KFMWQHLIRSHKAVAGLACG--VCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       439 ~~l~~H~~~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      ..|..|+...|.++++|.|+  .|++.|.+...|..|++ .|.+     +++|.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTG-----QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHH-HHHC-----CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHH-hhCC-----CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45666777788889999997  59999999999999987 5655     688999999999999999999998874

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=3.7e-12  Score=89.61  Aligned_cols=56  Identities=23%  Similarity=0.501  Sum_probs=39.8

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhc-CCCCcccccccccccCCHHHHHHHHHhhC
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSH-KAVAGLACGVCLKISETYEALALHLDQAH  478 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H-~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  478 (537)
                      ++||.|+.|++.|.+...|..|++..| .++++|.|+.|++.|.+...|..|++.+|
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            567777777777777777777764446 56777777777777777777777777655

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=5.9e-12  Score=91.95  Aligned_cols=64  Identities=20%  Similarity=0.357  Sum_probs=36.9

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHh-hhhCCC
Q psy12165        449 HKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLA-VHVGLD  515 (537)
Q Consensus       449 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~g~~  515 (537)
                      |+++++|.|.+|++.|.+...|..|++.++..   .++++|.|++|++.|.....|..|++ .|.++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~---~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAET---VAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHH---TTTCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc---CCCcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            55666666666666666666666666533210   01356666666666666666666663 344443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=1.2e-11  Score=85.05  Aligned_cols=55  Identities=27%  Similarity=0.498  Sum_probs=33.7

Q ss_pred             cccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHH-hhhhCC
Q psy12165        454 GLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHL-AVHVGL  514 (537)
Q Consensus       454 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~g~  514 (537)
                      ||.|..|++.|.+...|..|++ .|.+     +++|.|+.|++.|.+...|..|+ ++|.|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~-~h~~-----~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYR-SHTN-----EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHH-TTTS-----SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHH-HhCC-----CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5666666666666666666665 3544     45666666666666666666665 455543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.22  E-value=1.2e-11  Score=83.98  Aligned_cols=49  Identities=22%  Similarity=0.424  Sum_probs=25.0

Q ss_pred             cccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        426 VTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       426 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      |.|+.|++.|.+...|..|+ ..|.++++|.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   50 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKHMK   50 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH-HHTSSCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CcCCCCcCcCCCHHHHHHHH-HhcCCCCCccCCCCCchhcCHHHHHHHHH
Confidence            44555555555555555554 34555555555555555555555555544

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=8.5e-12  Score=89.77  Aligned_cols=53  Identities=32%  Similarity=0.790  Sum_probs=30.8

Q ss_pred             CCccccc--cccccccChhHHHHhHhhh-cCCccccccccccCCChHHHHHHHHhc
Q psy12165        357 KKPYACR--ICARLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEH  409 (537)
Q Consensus       357 ~~~~~C~--~C~~~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h  409 (537)
                      +++|.|+  .|++.|.....|..|+++| ++++|.|++|++.|.....|..|+++|
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            4555554  3666666555666665555 555566666666666666666665554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.5e-11  Score=88.54  Aligned_cols=64  Identities=19%  Similarity=0.406  Sum_probs=49.6

Q ss_pred             cCCCCCccccccCCcccChHHHHHHHHhcCCCCCCCCccccccCCCceeecccchhhccChHHHHHHHhhcCCCC
Q psy12165        120 HKGHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKHKKTCKGPK  194 (537)
Q Consensus       120 H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  194 (537)
                      |.++++|.|++|++.|.....|..|++.|++.           .++++|.|.+|++.|.....|..|++.+|...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~-----------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAET-----------VAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHH-----------TTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc-----------CCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            67788888888888888888888888887510           02678888888888888888888886655544

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.3e-13  Score=99.61  Aligned_cols=23  Identities=26%  Similarity=0.167  Sum_probs=10.0

Q ss_pred             CcccccccccccCCHHHHHHHHH
Q psy12165        453 AGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       453 ~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ++|.|..|++.|.+...|..|++
T Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~~   60 (73)
T 2ctu_A           38 KTPMCEKCRKDSCQEAALNKDEG   60 (73)
T ss_dssp             SSCCCHHHHHTCSCCCSSCCCSS
T ss_pred             CCCCCCCCChhhcCHHHHHHHHH
Confidence            34444444444444444444433

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.08  E-value=1.6e-10  Score=87.87  Aligned_cols=60  Identities=18%  Similarity=0.276  Sum_probs=32.9

Q ss_pred             cccccccccCCChHHHHHHHHh-ccCCCCCccCCCCCCCC--------cccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        387 VNCRVCGSIFHSEPELKVHLEE-HTDVPETKEQKPRPELP--------VTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       387 ~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~~~~~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      |.|..|++.|.....|..|+++ |.+           +++        |.|++|++.|.....|..|+ ..|++++||.|
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~-----------~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   93 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVG-----------GPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKSGPS   93 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTC-----------CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH-HHHHTCCCCSS
T ss_pred             CcccccccccCCHHHHHHHHHHhccC-----------CCCCCccceeccCCCCCCcccCCHHHHHHHH-HhcCCCCCCCC
Confidence            4566666666666666666655 444           222        55555555555555555554 45555555555


Q ss_pred             c
Q psy12165        458 G  458 (537)
Q Consensus       458 ~  458 (537)
                      .
T Consensus        94 ~   94 (95)
T 2ej4_A           94 S   94 (95)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=7.2e-13  Score=95.57  Aligned_cols=48  Identities=15%  Similarity=0.268  Sum_probs=22.4

Q ss_pred             CccccccccccccChhHHHHhHhhhcCCccccccccccCCChHHHHHHHHhccC
Q psy12165        358 KPYACRICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       358 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ++|.|++|++.|.....|..      +++|.|++|++.|.....|..|+++|++
T Consensus        17 ~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~   64 (73)
T 2ctu_A           17 RSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESG   64 (73)
T ss_dssp             SEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCC
T ss_pred             CCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcC
Confidence            34444444444444333333      3445555555555555555555555444

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.06  E-value=2e-10  Score=87.41  Aligned_cols=57  Identities=26%  Similarity=0.375  Sum_probs=37.8

Q ss_pred             ccccccccccCCHHHHHHHHHhhCCCCcccccCC--------cccccccccccChhHHHHHHhhhhCCCc
Q psy12165        455 LACGVCLKISETYEALALHLDQAHPGYFAEEVDN--------PTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       455 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      |.|..|++.|.+...|..|++..|.+     .++        |.|++|++.|.+...|..|+++|+|+++
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~-----~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   90 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVG-----GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS   90 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTC-----CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC
T ss_pred             CcccccccccCCHHHHHHHHHHhccC-----CCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            45666666666666666666543554     333        7777777777777777777777777766

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=7.9e-11  Score=82.60  Aligned_cols=58  Identities=22%  Similarity=0.272  Sum_probs=39.2

Q ss_pred             CCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccc-cccccccChhHHHHHHhhhhCCC
Q psy12165        450 KAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCE-VCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       450 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      -+++||.|..|++.|. ...|..|++.  .+     ++||+|+ .|+++|..++.|..|+++|....
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~--~~-----~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ--CP-----RLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH--CS-----SSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH--cC-----CcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            3456677777777777 7777777663  33     5677777 77777777777777777766543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.9e-10  Score=80.64  Aligned_cols=50  Identities=24%  Similarity=0.322  Sum_probs=25.4

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc-ccccccCCHHHHHHHHH
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG-VCLKISETYEALALHLD  475 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~-~C~~~f~~~~~l~~H~~  475 (537)
                      ++||.|+.|++.|. ...|..|++ . .+++||.|. .|++.|.....|..|++
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~-~-~~~~p~~C~~~C~k~f~~~~~L~~H~~   58 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQY-Q-CPRLPVACPNQCGVGTVAREDLPGHLK   58 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHH-H-CSSSEEECTTCCSCCEEETTTHHHHHH
T ss_pred             CCCeeccccCCccC-HHHHHHHHH-H-cCCcCccCCcccCcccccHHHHHHHHH
Confidence            44555555555555 555555542 2 445555555 55555555555555544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.98  E-value=1.8e-10  Score=74.13  Aligned_cols=34  Identities=29%  Similarity=0.483  Sum_probs=17.3

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG   37 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCC
Confidence            34444 44555555555555555555555555554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=4.5e-10  Score=74.97  Aligned_cols=43  Identities=19%  Similarity=0.373  Sum_probs=20.2

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccccccC
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCLKISE  465 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f~  465 (537)
                      ++||.|++|++.|.....|..|++..|.++++|.|.+|++.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            3444444444444444444444422444444444444444443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2e-10  Score=73.89  Aligned_cols=34  Identities=29%  Similarity=0.504  Sum_probs=17.3

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG   37 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCC
Confidence            34444 44555555555555555555555555554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2e-10  Score=73.95  Aligned_cols=34  Identities=35%  Similarity=0.568  Sum_probs=16.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG   37 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCC
Confidence            33344 44444444444444444444444444444

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=73.67  Aligned_cols=29  Identities=34%  Similarity=0.672  Sum_probs=14.0

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoq_A            9 GEKPFKCDICGKSFCGRSRLNRHSMVHTA   37 (46)
T ss_dssp             SSCSCCCSSSCCCCSSHHHHHHHHHHTTC
T ss_pred             CCCCcCCCcCCchhCCHHHHHHHHHHcCC
Confidence            44444444444444444444444444444

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.97  E-value=1.8e-10  Score=74.17  Aligned_cols=37  Identities=14%  Similarity=0.118  Sum_probs=19.7

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||+|++|++.|.....|..|+ ..|++++||.|+.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em0_A           10 EKTWKCRECDMCFSQASSLRLHQ-NVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHG-GGGSSSSCSCSSCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHH-HHcCCCCCcCCCCC
Confidence            44555555555555555555554 44555555555544

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.7e-10  Score=74.19  Aligned_cols=34  Identities=32%  Similarity=0.555  Sum_probs=17.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG   37 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSS
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcC
Confidence            34444 45555555555555555555555555554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=74.03  Aligned_cols=37  Identities=16%  Similarity=0.282  Sum_probs=18.4

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|..|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHG-GGTSCCCCCSCCCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHh-hhcCCCCCCCCCCC
Confidence            44455555555555555555554 44555555555444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=74.03  Aligned_cols=34  Identities=29%  Similarity=0.511  Sum_probs=18.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG   37 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCC
Confidence            44444 45555555555555555555555555554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=74.09  Aligned_cols=34  Identities=29%  Similarity=0.418  Sum_probs=19.2

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG   37 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCC
Confidence            44445 55555555555555555555555555555

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.4e-10  Score=73.52  Aligned_cols=34  Identities=29%  Similarity=0.409  Sum_probs=19.4

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK   37 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCC
Confidence            44455 55555555555555555555555555555

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.2e-10  Score=72.93  Aligned_cols=29  Identities=34%  Similarity=0.676  Sum_probs=15.3

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++||+.|.....|..|+++|++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (44)
T 2emx_A            7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAE   35 (44)
T ss_dssp             SCCCEECSSSSCEESSHHHHHHHHHHHTS
T ss_pred             CCcCccCCCCCcccCCHHHHHHHHHHhCC
Confidence            44555555555555555555555555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=73.61  Aligned_cols=34  Identities=32%  Similarity=0.425  Sum_probs=17.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG   37 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCC
Confidence            44444 45555555555555555555555555554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=74.05  Aligned_cols=34  Identities=26%  Similarity=0.463  Sum_probs=19.1

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG   37 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTT
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCC
Confidence            44444 55555555555555555555555555555

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=74.13  Aligned_cols=34  Identities=26%  Similarity=0.346  Sum_probs=20.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG   37 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCC
Confidence            44455 55566666666666666666666666655

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=73.66  Aligned_cols=37  Identities=22%  Similarity=0.290  Sum_probs=18.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||+|++|++.|.....|..|+ ..|++++||.|+.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A           10 EKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHH-TTTTTSCCSCCCCC
T ss_pred             CCCeeCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            44455555555555555555554 44555555555444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.95  E-value=2.1e-10  Score=73.78  Aligned_cols=34  Identities=29%  Similarity=0.541  Sum_probs=19.1

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG   37 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCC
Confidence            44444 55555555555555555555555555555

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.9e-10  Score=73.13  Aligned_cols=29  Identities=34%  Similarity=0.599  Sum_probs=13.9

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2epz_A            9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTG   37 (46)
T ss_dssp             CCCSBCCTTTCCCBSSHHHHHHHHTTTTT
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHhCC
Confidence            44444444444444444444444444444

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=73.67  Aligned_cols=34  Identities=32%  Similarity=0.526  Sum_probs=19.8

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG   37 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCC
Confidence            44455 55556666666666666666666665555

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=73.54  Aligned_cols=37  Identities=22%  Similarity=0.346  Sum_probs=18.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|..|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytr_A           10 EKPYKCNECGKAFSQTSKLARHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCTTCCTTTCCCCSSHHHHHHHH-TTTTTCSCCCSCCC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            44455555555555555555554 44555555555444

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.9e-10  Score=74.04  Aligned_cols=34  Identities=29%  Similarity=0.459  Sum_probs=19.9

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++||+.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR   37 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcC
Confidence            44455 55556666666666666666666666555

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.95  E-value=2.6e-10  Score=73.30  Aligned_cols=33  Identities=33%  Similarity=0.501  Sum_probs=16.0

Q ss_pred             Hhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        379 IKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       379 ~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++| +++||.|++|++.|.....|..|+++|++
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG   37 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHHHcCC
Confidence            3344 44445555555555555555555554444

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.4e-10  Score=72.80  Aligned_cols=37  Identities=24%  Similarity=0.495  Sum_probs=18.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A           10 EKPYGCSECGKAFSSKSYLIIHM-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSCBCSSSCCBCSCHHHHHHHH-TTTCCSCSSCCCCC
T ss_pred             CCCcCCCccChhhCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            44455555555555555555554 44555555555444

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.9e-10  Score=74.02  Aligned_cols=37  Identities=16%  Similarity=0.254  Sum_probs=17.1

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A           10 TKSHQCHECGRGFTLKSHLNQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHH-TTTSCSCCSSCCCC
T ss_pred             CCCeECCcCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34444444444444444444443 34444444444443

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.1e-10  Score=72.95  Aligned_cols=37  Identities=24%  Similarity=0.310  Sum_probs=17.3

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||.|++|++.|.....|..|+ ..|++++||.|..|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A           10 EKPYKCEDCGKGYNRRLNLDMHQ-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHG-GGGGSCCCCCSCCC
T ss_pred             CCCeeCcccCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            34444444444444444444443 34444444444443

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.1e-10  Score=73.77  Aligned_cols=34  Identities=29%  Similarity=0.489  Sum_probs=17.3

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG   37 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence            33444 44555555555555555555555555554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.95  E-value=1.9e-10  Score=74.05  Aligned_cols=37  Identities=24%  Similarity=0.372  Sum_probs=16.9

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||.|++|++.|.....|..|+ ..|++++||.|+.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A           10 VKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHG-GGSSSCCCSCCTTC
T ss_pred             CCceECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34444444444444444444443 34444444444443

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.5e-10  Score=73.41  Aligned_cols=34  Identities=29%  Similarity=0.492  Sum_probs=16.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG   37 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCC
Confidence            33444 44455555555555555555555555444

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2e-10  Score=73.92  Aligned_cols=34  Identities=32%  Similarity=0.483  Sum_probs=19.4

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG   37 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCC
Confidence            44445 55555555555555555555555555555

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.2e-10  Score=73.69  Aligned_cols=34  Identities=29%  Similarity=0.524  Sum_probs=19.1

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG   37 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCC
Confidence            44444 55555555555555555555555555555

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.2e-10  Score=72.90  Aligned_cols=34  Identities=26%  Similarity=0.400  Sum_probs=18.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG   37 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCC
Confidence            34444 45555555555555555555555555555

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.5e-10  Score=73.41  Aligned_cols=34  Identities=32%  Similarity=0.600  Sum_probs=16.9

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG   37 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSS
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCC
Confidence            33444 44455555555555555555555555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.5e-10  Score=73.40  Aligned_cols=34  Identities=26%  Similarity=0.485  Sum_probs=16.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG   37 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCC
Confidence            33344 44444444444444444444444444444

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.3e-10  Score=73.64  Aligned_cols=34  Identities=26%  Similarity=0.428  Sum_probs=16.8

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG   37 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCC
Confidence            33444 44455555555555555555555555544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.4e-10  Score=73.51  Aligned_cols=34  Identities=29%  Similarity=0.516  Sum_probs=16.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++||+.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD   37 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCS
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence            33444 44455555555555555555555555444

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.1e-10  Score=72.98  Aligned_cols=29  Identities=34%  Similarity=0.572  Sum_probs=13.9

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em7_A            9 GEKPYKCEECGKGFICRRDLYTHHMVHTG   37 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHHHHGGGGTT
T ss_pred             CCcCccCCCccchhCCHHHHHHHHHHhCC
Confidence            44444444444444444444444444444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=73.38  Aligned_cols=34  Identities=29%  Similarity=0.512  Sum_probs=16.8

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG   37 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            34444 44455555555555555555555555544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.92  E-value=5.7e-10  Score=79.77  Aligned_cols=52  Identities=19%  Similarity=0.363  Sum_probs=28.9

Q ss_pred             CCCcccCC--CCCCCCChHHHHHHHHhhcCCCCcccccc--cccccCCHHHHHHHHH
Q psy12165        423 ELPVTCDL--CSKEWPSRKFMWQHLIRSHKAVAGLACGV--CLKISETYEALALHLD  475 (537)
Q Consensus       423 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~  475 (537)
                      .++|.|+.  |++.|.....|..|+ ..|.++++|.|.+  |++.|.....|..|++
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHT-RTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHH-HHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             cCceeCCCCCCccccCCHHHHHHHH-HhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            44555555  555555555555555 4555555555543  5555555555555543

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2e-10  Score=73.94  Aligned_cols=34  Identities=29%  Similarity=0.514  Sum_probs=17.9

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG   37 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHS
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCC
Confidence            34444 45555555555555555555555555555

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=4.3e-10  Score=72.30  Aligned_cols=29  Identities=28%  Similarity=0.580  Sum_probs=14.2

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2enc_A            9 GEKPFKCEECGKGFYTNSQCYSHQRSHSG   37 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCcCCCCCCCcCCChHHHHHHHHHhCC
Confidence            44444444444444444444444444444

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.91  E-value=3.6e-10  Score=72.69  Aligned_cols=37  Identities=22%  Similarity=0.346  Sum_probs=16.7

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||.|++|++.|.....|..|+ ..|.+++||.|..|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A           10 EKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHG-GGGTSCCCCSTTCC
T ss_pred             CcCeECCccccccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            33444444444444444444443 34444444444443

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.1e-10  Score=72.99  Aligned_cols=34  Identities=29%  Similarity=0.483  Sum_probs=18.1

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG   37 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCS
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCC
Confidence            34444 45555555555555555555555555554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.2e-10  Score=72.35  Aligned_cols=34  Identities=29%  Similarity=0.357  Sum_probs=18.5

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMG   37 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCC
Confidence            34444 45555555555555555555555555555

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=9.1e-10  Score=73.49  Aligned_cols=48  Identities=21%  Similarity=0.203  Sum_probs=33.8

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccC
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNA  500 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~  500 (537)
                      .|.++++|.|..|++.|.....|.+|++..|.+     ++||+|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~-----~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-----ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCC-----CCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCC-----CCCccCCCCCCCCCC
Confidence            456667777777777777777777777656665     577777777777765

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.9e-10  Score=73.13  Aligned_cols=34  Identities=29%  Similarity=0.497  Sum_probs=19.2

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG   37 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSS
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCC
Confidence            44444 55555555555555555555555555555

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.9e-10  Score=73.97  Aligned_cols=37  Identities=27%  Similarity=0.408  Sum_probs=16.5

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A           10 EKPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            33444444444444444444443 34444444444443

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.89  E-value=5.9e-10  Score=71.65  Aligned_cols=34  Identities=26%  Similarity=0.477  Sum_probs=18.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG   37 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            44445 55555555555555555555555555555

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.1e-10  Score=72.38  Aligned_cols=34  Identities=29%  Similarity=0.463  Sum_probs=16.4

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG   37 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTT
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC
Confidence            33444 44445555555555555555555544444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5e-10  Score=71.98  Aligned_cols=33  Identities=27%  Similarity=0.445  Sum_probs=18.3

Q ss_pred             Hhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        379 IKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       379 ~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++| +++||.|++|++.|.....|..|+++|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG   37 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHHHHcC
Confidence            3444 45555555555555555555555555555

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.89  E-value=5.9e-10  Score=71.61  Aligned_cols=29  Identities=31%  Similarity=0.517  Sum_probs=14.3

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2el6_A            9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTR   37 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            44444455555555444445555444444

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.9e-10  Score=71.66  Aligned_cols=37  Identities=19%  Similarity=0.269  Sum_probs=18.2

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||.|++|++.|.....|..|+ ..|++++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           10 EKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCBTTTTBCCSCHHHHHHHH-HHCCSSSCCCCCCC
T ss_pred             CCCeECCCCCCccCchHHHHHHH-HhcCCCCCCCCCCC
Confidence            34455555555555555555554 44445555555444

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.9e-10  Score=71.72  Aligned_cols=38  Identities=16%  Similarity=0.190  Sum_probs=19.4

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||.|++|++.|.....|..|++..|++++||.|..|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A           10 KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            44555555555555555555554225555555555544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.6e-10  Score=71.39  Aligned_cols=34  Identities=26%  Similarity=0.472  Sum_probs=17.1

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG   37 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCC
Confidence            34444 44555555555555555555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.9e-10  Score=71.02  Aligned_cols=42  Identities=19%  Similarity=0.246  Sum_probs=20.1

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|.+|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMR-THSG-----EKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHT-TTCC-----SCSSCCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34444555555555555555555555544 3433     344555444

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.3e-10  Score=71.20  Aligned_cols=37  Identities=27%  Similarity=0.409  Sum_probs=18.0

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||+|++|++.|.....|..|+ ..|++++||.|..|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           10 EKPFKCDICGKSFCGRSRLNRHS-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHH-HHTTCCCSSSCCCC
T ss_pred             CCCcCCCcCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34455555555555555555553 34444455554443

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.8e-10  Score=71.07  Aligned_cols=34  Identities=29%  Similarity=0.473  Sum_probs=16.4

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG   37 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCC
Confidence            33444 44445555555555555555555444444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8e-10  Score=71.02  Aligned_cols=41  Identities=20%  Similarity=0.167  Sum_probs=19.5

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      .|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQR-IHTG-----ENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHT-TTTT-----SCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHH-HcCC-----CCCCCCCCC
Confidence            4444445555555555555555555544 3433     344554444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.87  E-value=6.8e-10  Score=71.34  Aligned_cols=37  Identities=24%  Similarity=0.392  Sum_probs=18.2

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||.|++|++.|.....|..|+ ..|++++||.|+.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A           10 EKPYECKECGKAFSQTTHLIQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCBCSSSCCBCSCHHHHHHHH-HHHSSCCCSSCCCC
T ss_pred             CCceECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34455555555555555555554 34444555555443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.6e-10  Score=71.11  Aligned_cols=37  Identities=24%  Similarity=0.270  Sum_probs=18.4

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|..|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A           10 EKPFDCIDCGKAFSDHIGLNQHR-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSBCCTTTCCCBSSHHHHHHHH-TTTTTCCCCSSCCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            44455555555555555555554 44555555555444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.2e-10  Score=71.24  Aligned_cols=37  Identities=19%  Similarity=0.301  Sum_probs=18.9

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||.|++|++.|.....|..|+ ..|.++++|.|..|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eov_A           10 EKPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHH-HHHSCCSSCCSCCC
T ss_pred             CCCccCCccChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            44555555555555555555554 44555555555444

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.8e-10  Score=71.06  Aligned_cols=34  Identities=21%  Similarity=0.320  Sum_probs=19.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG   37 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGS
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCC
Confidence            34444 55555555555555555555555555555

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.9e-10  Score=71.65  Aligned_cols=42  Identities=21%  Similarity=0.277  Sum_probs=20.5

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C   46 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQR-IHSG-----KKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHG-GGSS-----CCCSCSSCC
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHH-HhcC-----CCCCCCCCC
Confidence            34445555555555555555555555544 3433     345555444

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.86  E-value=6e-10  Score=71.58  Aligned_cols=37  Identities=22%  Similarity=0.303  Sum_probs=20.7

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ely_A           10 EKPFKCVECGKGFSRRSALNVHH-KLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSBCCSSSCCCBSSTTHHHHHH-HHHSCCSSCSCCCC
T ss_pred             CCCcccCccCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            45555555555555555555554 45555555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=9.1e-10  Score=70.72  Aligned_cols=34  Identities=32%  Similarity=0.554  Sum_probs=19.9

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG   37 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCC
Confidence            44445 55566666666666666666666666655

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.7e-10  Score=71.72  Aligned_cols=42  Identities=19%  Similarity=0.194  Sum_probs=22.0

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQR-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHT-TTCC-----CCCCSCCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHh-hcCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3444     455555554

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=6e-10  Score=71.61  Aligned_cols=42  Identities=17%  Similarity=0.125  Sum_probs=20.8

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C   46 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHHT-TTSC-----SCCSSCCCC
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34445555555555555555555555544 3443     445555544

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.85  E-value=6.2e-10  Score=71.55  Aligned_cols=34  Identities=26%  Similarity=0.417  Sum_probs=16.2

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG   37 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSS
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCC
Confidence            33444 44444444444444444444444444444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.3e-10  Score=71.50  Aligned_cols=42  Identities=24%  Similarity=0.249  Sum_probs=21.4

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~-----~~~~~C~~C   46 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQR-IHTG-----VKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHHG-GGSC-----CCSCSSCCC
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHHH-HcCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3443     455555544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.3e-10  Score=71.21  Aligned_cols=42  Identities=19%  Similarity=0.158  Sum_probs=20.2

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C   46 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQR-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHHG-GGCC-----CSCCSSCCC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHHH-hcCC-----CCCCCCCCC
Confidence            34444455555555555555555555544 3433     344555444

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=5.3e-10  Score=71.06  Aligned_cols=42  Identities=14%  Similarity=0.193  Sum_probs=22.3

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAE-----EKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHH-HHTS-----SCSCSCCCC
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3443     455555554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.8e-10  Score=71.70  Aligned_cols=42  Identities=19%  Similarity=0.112  Sum_probs=20.9

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|.+|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQR-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHH-HHSC-----CCTTSSSCC
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34455555555555555555555555544 3333     345555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.8e-10  Score=71.32  Aligned_cols=42  Identities=19%  Similarity=0.220  Sum_probs=21.1

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-----~k~~~C~~c   46 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQK-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGG-GTSC-----SSCSCCCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34455555555555555555555555544 3433     445555544

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=7.2e-10  Score=71.22  Aligned_cols=37  Identities=22%  Similarity=0.375  Sum_probs=17.8

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|+|++|++.|.....|..|+ ..|++++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A           10 EKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHG-GGGTTCCCSSTTCC
T ss_pred             CcCccCCCccchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            34455555555554444555553 44444444444443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.84  E-value=7.9e-10  Score=71.04  Aligned_cols=34  Identities=29%  Similarity=0.434  Sum_probs=16.5

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG   37 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTS
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCC
Confidence            33444 44445555555555555555555544444

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.7e-10  Score=70.84  Aligned_cols=42  Identities=19%  Similarity=0.234  Sum_probs=21.7

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~c   46 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQQ-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHH-TTSS-----CCSCCSCCC
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3443     455555544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.6e-10  Score=71.12  Aligned_cols=42  Identities=21%  Similarity=0.173  Sum_probs=21.5

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-----~k~~~C~~c   46 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQL-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHT-TTCC-----CCCSCCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCC-----CCCCCCCCC
Confidence            34555555555555555555555555544 3443     455555544

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.2e-10  Score=70.72  Aligned_cols=42  Identities=17%  Similarity=0.101  Sum_probs=23.2

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~c   46 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQK-IHTK-----QKPSGPSSG   46 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHH-HTSC-----CCCSSCSCC
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHH-HcCC-----CCCCCCCCC
Confidence            44555555555555555555555555554 4444     455555554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=7.6e-10  Score=71.11  Aligned_cols=42  Identities=21%  Similarity=0.162  Sum_probs=20.8

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.....|..|++ .|.+     ++||+|+.|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQR-VHMG-----EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHT-TTCC-----SCSSCCSCC
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34445555555555555555555555544 3443     445555544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=6.7e-10  Score=71.37  Aligned_cols=42  Identities=19%  Similarity=0.138  Sum_probs=22.3

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQR-THAG-----EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHH-HHTT-----SCCSCSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHH-HcCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3443     455555554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=8e-10  Score=71.02  Aligned_cols=41  Identities=17%  Similarity=0.079  Sum_probs=19.7

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      .|+++++|.|..|++.|.....|..|++ .|.+     ++||+|++|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQR-THVD-----DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHH-HCCS-----CCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            4444445555555555555555555544 3433     344555444

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.8e-10  Score=71.66  Aligned_cols=42  Identities=24%  Similarity=0.285  Sum_probs=21.5

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQV-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHH-HHHC-----CSCCSCCCC
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHH-HcCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3333     455555544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=7.8e-10  Score=71.06  Aligned_cols=42  Identities=19%  Similarity=0.146  Sum_probs=21.3

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRR-IHTG-----YRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHH-HHTC-----CCSSCSSCC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHH-HcCC-----CCCCCCCCC
Confidence            34555555555555555555555555544 3433     455555544

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.2e-10  Score=70.92  Aligned_cols=37  Identities=24%  Similarity=0.271  Sum_probs=18.1

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||.|++|++.|.....|..|+ ..|.+++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytm_A           10 EKPYKCMECGKAFGDNSSCTQHQ-RLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSSSBTTTTBCCSSHHHHHHHH-HHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            44455555555555555555554 34444455555444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.82  E-value=8.5e-10  Score=70.89  Aligned_cols=42  Identities=19%  Similarity=0.225  Sum_probs=21.5

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.....|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~c   46 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQK-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHT-GGGC-----CCCCSSSCC
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHH-hcCC-----CCCCCCCCC
Confidence            34555555555555555555555555544 3433     455555544

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.2e-10  Score=70.96  Aligned_cols=42  Identities=19%  Similarity=0.164  Sum_probs=21.8

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||.|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C   46 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQR-VHTG-----EKPSGPSSG   46 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGG-GGSC-----CCCSCCCCC
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHH-HcCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3443     455555544

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.3e-09  Score=70.38  Aligned_cols=34  Identities=26%  Similarity=0.394  Sum_probs=17.6

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHH-hccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLE-EHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|++ +|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   38 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG   38 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCC
Confidence            34444 4555555555555555555555555 5544

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1e-09  Score=70.51  Aligned_cols=42  Identities=19%  Similarity=0.102  Sum_probs=22.0

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSG-----EKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHH-HSCC-----SSCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3444     455555554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=6.5e-10  Score=71.44  Aligned_cols=42  Identities=19%  Similarity=0.105  Sum_probs=20.6

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHLK-RHFR-----EKSSGPSSG   46 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHHH-HHHS-----TTSSCCSCC
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHHH-HHcC-----CCCCCCCCC
Confidence            34455555555555555555555555544 2333     345555544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.81  E-value=4.6e-09  Score=74.95  Aligned_cols=58  Identities=22%  Similarity=0.358  Sum_probs=44.9

Q ss_pred             hcCCCCcccccc--cccccCCHHHHHHHHHhhCCCCcccccCCccccc--ccccccChhHHHHHHhhh
Q psy12165        448 SHKAVAGLACGV--CLKISETYEALALHLDQAHPGYFAEEVDNPTCEV--CGRYHNARPKLESHLAVH  511 (537)
Q Consensus       448 ~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  511 (537)
                      .+...++|.|..  |++.|.....|..|++ .|.+     +++|+|++  |++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTG-----EKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHH-HHSS-----SCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHH-hcCC-----CCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345667788877  8888888888888887 5655     67888865  888888888888888765

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8.7e-10  Score=70.83  Aligned_cols=42  Identities=19%  Similarity=0.200  Sum_probs=22.9

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWR-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHH-HHSS-----SSCSSCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHH-HHCC-----CCCCCCCCC
Confidence            44555555555555555555555555555 3443     455555554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=7.7e-10  Score=71.09  Aligned_cols=42  Identities=19%  Similarity=0.164  Sum_probs=24.6

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C   46 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQK-VHTG-----ERPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHT-TSCS-----CCSSCCSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHH-hhCC-----CCCCCCCCC
Confidence            45556666666666666666666666655 4544     456666555

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=7.4e-10  Score=71.17  Aligned_cols=42  Identities=21%  Similarity=0.191  Sum_probs=21.7

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-----~k~~~C~~c   46 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQK-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHHH-HHHC-----SSCSSSCCC
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHHH-hcCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3433     455555544

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1e-09  Score=70.53  Aligned_cols=42  Identities=24%  Similarity=0.196  Sum_probs=21.4

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.....|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQV-LHMG-----QKNSGPSSG   46 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHH-HHSC-----CSCCCTTCC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3433     455555544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=6.2e-10  Score=71.53  Aligned_cols=34  Identities=26%  Similarity=0.451  Sum_probs=17.6

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG   37 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSS
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            44444 45555555555555555555555555554

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.80  E-value=1.4e-09  Score=69.82  Aligned_cols=34  Identities=29%  Similarity=0.475  Sum_probs=19.3

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG   37 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC
Confidence            44445 55555555555555555555555555555

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.80  E-value=1.4e-09  Score=69.86  Aligned_cols=37  Identities=19%  Similarity=0.286  Sum_probs=17.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|..|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2el6_A           10 VNPYKCSQCEKSFSGKLRLLVHQ-RMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHH-GGGCCSSCCSCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34444444444444444444443 44444444444443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.80  E-value=1.9e-09  Score=67.62  Aligned_cols=29  Identities=31%  Similarity=0.669  Sum_probs=13.6

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (42)
T 2el5_A            7 GENPYECSECGKAFNRKDQLISHQRTHAG   35 (42)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHGGGCC
T ss_pred             CCCCccCCCcChhhCCHHHHHHHHHhcCC
Confidence            44444444444444444444444444444

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=6.5e-10  Score=71.45  Aligned_cols=37  Identities=22%  Similarity=0.349  Sum_probs=19.2

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      ++||.|++|++.|.....|..|+ ..|++++||.|..|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2yu8_A           10 EKPYKCNECGKVFTQNSHLARHR-RVHTGGKPSGPSSG   46 (46)
T ss_dssp             CSSEECSSSCCEESSSHHHHHHT-HHHHSCCCSCSCCC
T ss_pred             CCCeECCcCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            44555555555555555555554 44555555555544

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.5e-09  Score=67.05  Aligned_cols=34  Identities=24%  Similarity=0.517  Sum_probs=17.7

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      ++||.|++|++.|.....|..|+ ..|+++++|.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   41 (42)
T 2yte_A            8 EKPYSCAECKETFSDNNRLVQHQ-KMHTVKSGPSS   41 (42)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHH-HHTSCCSSCCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            44555555555555555555554 44555555554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.7e-09  Score=69.42  Aligned_cols=35  Identities=20%  Similarity=0.358  Sum_probs=18.2

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|+|++|++.|.....|..|+ ..|++++||.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2enf_A           10 EKPYKCNECGKVFTQNSHLVRHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHH-TTTTTSSCCCCS
T ss_pred             CcCeECCCCCcccCCHHHHHHHH-HhhCCCCCCCCC
Confidence            44555555555555555555554 455555555553

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2e-09  Score=69.07  Aligned_cols=35  Identities=23%  Similarity=0.371  Sum_probs=16.4

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ep1_A           10 EKPYECSDCGKSFIKKSQLHVHQ-RIHTGENPSGPS   44 (46)
T ss_dssp             CCSSCCSSSCCCCSSHHHHHHHH-GGGSSSCCCSSS
T ss_pred             CCCcCCCCCCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            34444444444444444444444 344444444443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.8e-09  Score=69.31  Aligned_cols=35  Identities=20%  Similarity=0.359  Sum_probs=17.5

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq2_A           10 GKPYQCNECGKAFSQTSKLARHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             SCSSSCCSSCCCCSSHHHHHHHG-GGGCCCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            34455555555555555555554 445555555543

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.4e-09  Score=69.78  Aligned_cols=41  Identities=20%  Similarity=0.179  Sum_probs=20.2

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEV  493 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~  493 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~   45 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQK-IHTG-----EKPSGPSS   45 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHT-TTTT-----SCCCCTTC
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCC-----CCCCCCCC
Confidence            34445555555555555555555555544 3433     44555544

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=69.17  Aligned_cols=34  Identities=24%  Similarity=0.477  Sum_probs=15.8

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      ++||.|++|++.|.....|..|+ ..|++++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2yth_A           10 EKPFQCEECGKRFTQNSHLHSHQ-RVHTGEKPSGP   43 (46)
T ss_dssp             SSSBCCSSSCCCBSSHHHHHHHG-GGGTTCCCSSC
T ss_pred             CcCCCCCCCCcccCCHHHHHHHH-HhcCCCCCCCC
Confidence            34444444444444444444443 34444444444

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=8.9e-10  Score=70.78  Aligned_cols=42  Identities=19%  Similarity=0.197  Sum_probs=24.9

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      .+|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQR-THTG-----EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHH-HHSS-----CCCSSSCCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHH-HcCC-----CCCCCCCCC
Confidence            45566666666666666666666666655 3444     456666655

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=3.6e-09  Score=67.49  Aligned_cols=29  Identities=31%  Similarity=0.696  Sum_probs=13.4

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   35 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDG   35 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHccC
Confidence            34444444444444444444444444444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=69.32  Aligned_cols=34  Identities=29%  Similarity=0.530  Sum_probs=19.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG   37 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCC
Confidence            44444 55555555555555555555555555555

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.7e-09  Score=69.38  Aligned_cols=34  Identities=26%  Similarity=0.547  Sum_probs=18.2

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG   37 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC
Confidence            44444 45555555555555555555555555555

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2e-09  Score=69.14  Aligned_cols=35  Identities=20%  Similarity=0.349  Sum_probs=18.4

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHH-TTTSCSCCSSTT
T ss_pred             CcCeECCCCCcccCChhHHHHHh-HhcCCCCCCCCC
Confidence            44555555555555555555554 455555555553

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.6e-09  Score=68.56  Aligned_cols=35  Identities=20%  Similarity=0.343  Sum_probs=16.8

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2emg_A           10 ENPFICSECGKVFTHKTNLIIHQ-KIHTGERPSGPS   44 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHH-TTTSCCCCSCSC
T ss_pred             CCCEECCccCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            34444545555554444454444 444444444443

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.7e-09  Score=69.39  Aligned_cols=34  Identities=29%  Similarity=0.482  Sum_probs=16.4

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG   37 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC
Confidence            33344 44445555555555555555555544444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.2e-09  Score=68.91  Aligned_cols=34  Identities=26%  Similarity=0.478  Sum_probs=17.9

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG   37 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC
Confidence            34444 45555555555555555555555555554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.4e-09  Score=68.73  Aligned_cols=35  Identities=26%  Similarity=0.427  Sum_probs=18.9

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|+|++|++.|.....|..|+ ..|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHH-TTTSSSCCCCTT
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            44555555555555555555554 455555555554

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.4e-09  Score=67.96  Aligned_cols=34  Identities=24%  Similarity=0.354  Sum_probs=15.9

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      ++||.|++|++.|.....|..|+ ..|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2eoh_A           10 KKPYECKECRKTFIQIGHLNQHK-RVHTGERSSGP   43 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHH-HHCSSCCSCST
T ss_pred             CCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            34444444444444444444443 34444444444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.3e-09  Score=68.80  Aligned_cols=35  Identities=20%  Similarity=0.323  Sum_probs=17.7

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq1_A           10 EKPYKCNECGKAFRAHSNLTTHQ-VIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCTTTTCCCSSHHHHHHHH-TTTCCSCCSSCC
T ss_pred             CCCeECCcCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            44455555555555555555554 445555555543

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.2e-09  Score=70.15  Aligned_cols=42  Identities=19%  Similarity=0.120  Sum_probs=21.0

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|.++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQR-VHTG-----EKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHH-HHHC-----CCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHH-HHcC-----CCCCCCCCC
Confidence            34455555555555555555555555554 3333     345555544

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.2e-09  Score=68.89  Aligned_cols=29  Identities=34%  Similarity=0.684  Sum_probs=13.7

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytf_A            9 GEKPFECSECQKAFNTKSNLIVHQRTHTG   37 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHHHHHHTSCS
T ss_pred             CCCCcCCCCCCcccCCHHHHHHHHHHhCC
Confidence            44444444444444444444444444444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.6e-09  Score=68.56  Aligned_cols=34  Identities=32%  Similarity=0.532  Sum_probs=19.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG   37 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHS
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCC
Confidence            44445 55556666666666666666666666555

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3e-09  Score=68.26  Aligned_cols=34  Identities=26%  Similarity=0.468  Sum_probs=17.8

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| ++++|.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG   37 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCS
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC
Confidence            34444 45555555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.7e-09  Score=68.49  Aligned_cols=37  Identities=24%  Similarity=0.347  Sum_probs=20.0

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           10 EKPYKCDVCHKSFRYGSSLTVHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-TTTSSSCCCSCCCC
T ss_pred             CCCeeCcccCcccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            44555555555555555555554 45555555555544

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.1e-09  Score=69.01  Aligned_cols=35  Identities=23%  Similarity=0.414  Sum_probs=16.7

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~p~~C~   44 (46)
T 2yts_A           10 EKPYICNECGKSFIQKSHLNRHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHG-GGTSSCCSSCCC
T ss_pred             CcCEECCCCChhhCChHHHHHHH-HhcCCCCCcCCC
Confidence            34444444444444444444443 444444444443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.1e-09  Score=69.03  Aligned_cols=34  Identities=35%  Similarity=0.567  Sum_probs=20.1

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ   37 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCC
Confidence            44455 55566666666666666666666666655

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.4e-09  Score=68.74  Aligned_cols=34  Identities=29%  Similarity=0.548  Sum_probs=18.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG   37 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCC
Confidence            44444 55555555555555555555555555555

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.8e-09  Score=67.76  Aligned_cols=29  Identities=34%  Similarity=0.678  Sum_probs=13.6

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2en9_A            9 GKKLFKCNECKKTFTQSSSLTVHQRIHTG   37 (46)
T ss_dssp             SSCCCBCTTTCCBCSSHHHHHHHHHHHTS
T ss_pred             CCCCEECCccCcccCCHHHHHHHHHHcCC
Confidence            44444444444444444444444444444

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3e-09  Score=68.23  Aligned_cols=35  Identities=23%  Similarity=0.410  Sum_probs=19.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      ++||+|++|++.|.....|..|+ ..|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eon_A           10 EKPYKCQVCGKAFRVSSHLVQHH-SVHSGERPSGPS   44 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHT-TTTTSCCSCTTS
T ss_pred             CcccCCCCCCcccCcHHHHHHHH-HhcCCCCCCCCC
Confidence            44555555555555555555554 455555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.3e-09  Score=68.84  Aligned_cols=34  Identities=29%  Similarity=0.469  Sum_probs=16.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG   37 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSS
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence            33344 44444444444444444444444444444

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.7e-09  Score=67.70  Aligned_cols=34  Identities=26%  Similarity=0.613  Sum_probs=18.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2en7_A           10 MKPYVCNECGKAFRSKSYLIIHT-RTHTGESGPSS   43 (44)
T ss_dssp             SSSSCCTTTCCCCSSHHHHHHHH-TTTCCSSSSCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHh-hhcCCCCCCCC
Confidence            44555555555555555555554 45555555555

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.7e-09  Score=67.74  Aligned_cols=34  Identities=29%  Similarity=0.505  Sum_probs=16.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG   37 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTT
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCC
Confidence            33344 44444444444444444444444444444

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.9e-09  Score=68.29  Aligned_cols=37  Identities=22%  Similarity=0.291  Sum_probs=17.5

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           10 EKPYQCSECGKSFSGSYRLTQHW-ITHTREKPSGPSSG   46 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHH-THHHHCCCCSCCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            34444444444444444444444 34444444444443

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3e-09  Score=67.52  Aligned_cols=34  Identities=26%  Similarity=0.517  Sum_probs=16.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG   37 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSS
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCC
Confidence            33344 44444444444444444444444444444

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.73  E-value=3.5e-10  Score=77.95  Aligned_cols=49  Identities=16%  Similarity=0.257  Sum_probs=29.1

Q ss_pred             HhHhhh-cCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChH
Q psy12165        377 EHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRK  439 (537)
Q Consensus       377 ~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~  439 (537)
                      .|+++| +++||.|++||+.|.....|.   ++|++           ++||+|++|++.|....
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~-----------~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPM-----------TGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETT-----------TTEEBCSSSCCBCEECT
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCC-----------CCCEECCCCCCccccCc
Confidence            455555 566666666666666655554   55555           55666666666665443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=2.9e-09  Score=67.58  Aligned_cols=34  Identities=24%  Similarity=0.396  Sum_probs=16.8

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR   37 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC
Confidence            33444 44455555555555555555555555544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.73  E-value=2.7e-09  Score=71.11  Aligned_cols=45  Identities=16%  Similarity=0.244  Sum_probs=30.6

Q ss_pred             ccccChhHHHHhHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        367 RLLGNGVKVSEHIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       367 ~~f~~~~~l~~H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +.|.....|..|+++| +++||.|++||+.|.....|..|+++|++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            4555666666676666 66677777777777777777777777666

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.5e-09  Score=68.60  Aligned_cols=42  Identities=24%  Similarity=0.213  Sum_probs=22.5

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.....|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~~   46 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLR-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHH-HHCC-----CCSSCSSCC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            34555555555555555555555555554 3443     455555543

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=4.8e-09  Score=65.73  Aligned_cols=28  Identities=14%  Similarity=0.261  Sum_probs=14.2

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      .|++++||.|..|++.|.+...|..|++
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~   31 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQK   31 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            4444555555555555555555555544

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3e-09  Score=68.23  Aligned_cols=34  Identities=29%  Similarity=0.458  Sum_probs=17.8

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR   37 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCC
Confidence            34444 45555555555555555555555555554

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=8.7e-09  Score=66.68  Aligned_cols=38  Identities=21%  Similarity=0.368  Sum_probs=20.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACGVCL  461 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~  461 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|.+|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C~   47 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHK-LSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHG-GGSCSCCCCCSCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHH-HhcCCCCCccCCCCC
Confidence            44555555555555555555554 455555555555554

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.5e-09  Score=67.92  Aligned_cols=34  Identities=29%  Similarity=0.482  Sum_probs=16.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG   37 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCC
Confidence            33444 44455555555555555555555555544

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=4.3e-09  Score=66.73  Aligned_cols=34  Identities=26%  Similarity=0.500  Sum_probs=15.7

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      +++|.|+.|++.|.....|..|+ ..|.+++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2emb_A           10 RKRYECSKCQATFNLRKHLIQHQ-KTHAAKSGPSS   43 (44)
T ss_dssp             CSSEECTTTCCEESCHHHHHHHG-GGGCCCCCTTC
T ss_pred             CCCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCC
Confidence            33444444444444444444443 34444444444

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=5.8e-09  Score=66.87  Aligned_cols=34  Identities=29%  Similarity=0.482  Sum_probs=17.5

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG   37 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC
Confidence            34444 45555555555555555555555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.70  E-value=3.8e-09  Score=66.23  Aligned_cols=28  Identities=18%  Similarity=0.240  Sum_probs=14.0

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      .|+++++|.|..|++.|.+...|..|++
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~   31 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQR   31 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHG
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHH
Confidence            4444455555555555555555555544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.70  E-value=1.6e-09  Score=72.29  Aligned_cols=49  Identities=14%  Similarity=0.134  Sum_probs=36.7

Q ss_pred             cccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        462 KISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       462 ~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      +.|.....|..|++ .|.+     +++|.|++|++.|.....|..|+++|+|+++
T Consensus         4 k~~~~~~~l~~h~~-~H~~-----~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   52 (54)
T 1yui_A            4 KRAKHPPGTEKPRS-RSQS-----EQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             CCCSCSSCCCCCHH-HHTS-----SCCEECTTTCCEESSHHHHHHHHHHHTTTSC
T ss_pred             cccCCCcchhhHHH-hcCC-----CCCccCCCCCcccCCHHHHHHHHHHhccCCC
Confidence            45666666777776 5655     6788888888888888888888888888765

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=4.5e-09  Score=65.85  Aligned_cols=34  Identities=24%  Similarity=0.501  Sum_probs=18.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      ++||+|++|++.|.....|..|+ ..|++++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2eos_A            9 EKPYPCEICGTRFRHLQTLKSHL-RIHTGSGPSSG   42 (42)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHT-TTTSCCSSTTC
T ss_pred             CCCEECCCCCCccCCHHHHHHHH-HhcCCCCCCCC
Confidence            44555555555555555555554 45555555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=6.3e-09  Score=66.70  Aligned_cols=34  Identities=29%  Similarity=0.495  Sum_probs=17.3

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG   37 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCC
Confidence            34444 44555555555555555555555555554

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=9.2e-09  Score=65.53  Aligned_cols=41  Identities=15%  Similarity=0.250  Sum_probs=19.6

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      .|+++++|.|..|++.|.....|..|++ .|.+     +++|.|++|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~-----~~~~~C~~c   44 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDG-----SVGKSGPSS   44 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHH-HHSC-----CCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHH-HccC-----CCCCCCcCC
Confidence            3444445555555555555555555544 3333     344555544

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=6.2e-09  Score=66.71  Aligned_cols=34  Identities=26%  Similarity=0.437  Sum_probs=18.4

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG   37 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            44444 55555555555555555555555555555

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=2.9e-09  Score=66.76  Aligned_cols=34  Identities=26%  Similarity=0.530  Sum_probs=19.0

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      ++||.|++|++.|.....|..|+ ..|++++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIVHI-RVHTGSGPSSG   42 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHTTG-GGTSCCSCCCC
T ss_pred             CCCeeCCCccchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            44555555555555555555554 45555555554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=6.7e-09  Score=66.55  Aligned_cols=34  Identities=29%  Similarity=0.532  Sum_probs=17.9

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG   37 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCC
Confidence            44444 45555555555555555555555555554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=8.4e-09  Score=66.09  Aligned_cols=43  Identities=19%  Similarity=0.250  Sum_probs=39.5

Q ss_pred             CCCCccccccccccccccccchHHHHHhHHhhCcccccccccccc
Q psy12165          2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVH   46 (537)
Q Consensus         2 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~c   46 (537)
                      +..|++++||.|++|++.|.....|..|++.|  .++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H--~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITH--TREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHH--HHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHc--CCCCCCCCCCC
Confidence            46799999999999999999999999999998  67899999876

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=7.5e-09  Score=65.58  Aligned_cols=34  Identities=18%  Similarity=0.398  Sum_probs=15.9

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   43 (44)
T 2eou_A           10 KTTSECQECGKIFRHSSLLIEHQ-ALHAGESGPSS   43 (44)
T ss_dssp             SCCCCCTTTCCCCSSHHHHHHHH-HHHTTSCCCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHH-HHHCCCCCCCC
Confidence            34444444444444444444443 34444444444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.9e-09  Score=66.83  Aligned_cols=35  Identities=29%  Similarity=0.478  Sum_probs=20.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2enh_A           10 EKPYECDVCRKAFSHHASLTQHQ-RVHSGEKPSGPS   44 (46)
T ss_dssp             SSSCBCTTTCCBCSSSHHHHHHG-GGSCCSCCCCCC
T ss_pred             CCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            45566666666666666666664 456666666554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7.4e-09  Score=66.35  Aligned_cols=34  Identities=32%  Similarity=0.550  Sum_probs=17.4

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG   37 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            34444 44555555555555555555555555554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.68  E-value=6.3e-09  Score=65.19  Aligned_cols=29  Identities=31%  Similarity=0.551  Sum_probs=13.3

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         8 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQ   36 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTTC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHhhhcCC
Confidence            34444444444444444444444444444

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.68  E-value=6.8e-10  Score=76.48  Aligned_cols=53  Identities=19%  Similarity=0.239  Sum_probs=37.6

Q ss_pred             HHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHH
Q psy12165        443 QHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLE  505 (537)
Q Consensus       443 ~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~  505 (537)
                      .|+ ..|++++||.|+.|++.|.....|.    ..|.+     ++||+|++|++.|....++.
T Consensus         4 ~h~-~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~-----~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            4 TDE-RDSTNRASFKCPVCSSTFTDLEANQ----LFDPM-----TGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCS-SSCCSSSEEECSSSCCEEEHHHHHH----HEETT-----TTEEBCSSSCCBCEECTTCS
T ss_pred             hHH-HHcCCCCCccCCCCCchhccHHHhH----hhcCC-----CCCEECCCCCCccccCcccc
Confidence            454 5677777888888888887777665    36665     67788888888887666543

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=1.1e-08  Score=66.25  Aligned_cols=43  Identities=23%  Similarity=0.270  Sum_probs=35.4

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccc
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGR  496 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~  496 (537)
                      .|.++++|.|.+|++.|.+...|..|++ .|.+     ++||+|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKL-SHSG-----EKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGG-GSCS-----CCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHH-hcCC-----CCCccCCCCCC
Confidence            4677888888888888888888888887 6766     68888888875

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7.9e-09  Score=66.21  Aligned_cols=34  Identities=32%  Similarity=0.510  Sum_probs=19.5

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG   37 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC
Confidence            44455 55555555555555555555555555555

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.5e-09  Score=65.61  Aligned_cols=29  Identities=21%  Similarity=0.298  Sum_probs=14.6

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ..|+++++|.|..|++.|.+...|..|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTR   33 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHT
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhh
Confidence            34445555555555555555555555544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.3e-09  Score=66.36  Aligned_cols=29  Identities=34%  Similarity=0.694  Sum_probs=14.3

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eon_A            9 GEKPYKCQVCGKAFRVSSHLVQHHSVHSG   37 (46)
T ss_dssp             SCCSCBCSSSCCBCSSHHHHHHHTTTTTS
T ss_pred             CCcccCCCCCCcccCcHHHHHHHHHhcCC
Confidence            44445555555555555555555444444

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=4.4e-09  Score=65.92  Aligned_cols=29  Identities=34%  Similarity=0.674  Sum_probs=13.9

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         8 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   36 (42)
T 2en2_A            8 GEKPYKCETCGARFVQVAHLRAHVLIHTG   36 (42)
T ss_dssp             SSCSEECTTTCCEESSHHHHHHHTHHHHS
T ss_pred             CCCCEeCCCcChhhCCHHHHHHHHHHcCC
Confidence            44444444444444444444444444444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=8e-09  Score=66.19  Aligned_cols=34  Identities=29%  Similarity=0.494  Sum_probs=17.4

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG   37 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCC
Confidence            44444 44555555555555555555555555544

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.9e-09  Score=65.96  Aligned_cols=34  Identities=24%  Similarity=0.349  Sum_probs=19.6

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG   37 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC
Confidence            44455 55556666666666666666666555555

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.7e-09  Score=66.26  Aligned_cols=34  Identities=29%  Similarity=0.498  Sum_probs=18.3

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG   37 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCC
Confidence            44444 55555555555555555555555555555

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=3.5e-09  Score=67.91  Aligned_cols=34  Identities=29%  Similarity=0.426  Sum_probs=18.6

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER   37 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHH
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCC
Confidence            44444 55555555555555555555555555555

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.1e-09  Score=66.15  Aligned_cols=35  Identities=17%  Similarity=0.260  Sum_probs=18.9

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|.|++|++.|.....|..|+ ..|++++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2en9_A           10 KKLFKCNECKKTFTQSSSLTVHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCBCTTTCCBCSSHHHHHHHH-HHHTSSCCCSCC
T ss_pred             CCCEECCccCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            44555555555555555555554 455555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=6.3e-09  Score=66.68  Aligned_cols=35  Identities=20%  Similarity=0.320  Sum_probs=17.2

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|+|++|++.|.....|..|+ ..|++++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytp_A           10 ERHYECSECGKAFARKSTLIMHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-TTTSCCCCCSSC
T ss_pred             CCCeECCcCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            44455555555555555555554 444455555443

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=5.8e-09  Score=66.84  Aligned_cols=29  Identities=24%  Similarity=0.202  Sum_probs=14.5

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ..|+++++|.|..|++.|.....|..|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRR   33 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHH
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHH
Confidence            34444555555555555555555555544

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=7e-09  Score=66.48  Aligned_cols=34  Identities=29%  Similarity=0.420  Sum_probs=16.5

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG   37 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSS
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCC
Confidence            33444 44455555555555555555555544444

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=7.2e-09  Score=66.41  Aligned_cols=33  Identities=27%  Similarity=0.429  Sum_probs=16.3

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCC
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~   37 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQR-THTG   37 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHH-TSCS
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhCC
Confidence            34445555555555555555555555544 3443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.64  E-value=5.8e-09  Score=66.87  Aligned_cols=29  Identities=24%  Similarity=0.255  Sum_probs=15.1

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ..|+++++|.|..|++.|.+...|..|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQR   33 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHH
Confidence            34455555555555555555555555544

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.6e-08  Score=64.76  Aligned_cols=42  Identities=21%  Similarity=0.235  Sum_probs=30.7

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQR-IHTG-----EKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHT-TTSS-----SCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            45677777777777777777777777776 5655     577777776

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=6.7e-09  Score=65.83  Aligned_cols=29  Identities=21%  Similarity=0.265  Sum_probs=14.9

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ..|+++++|.|..|++.|.+...|..|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQK   33 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHT
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence            34455555555555555555555555544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=6e-09  Score=66.80  Aligned_cols=29  Identities=24%  Similarity=0.316  Sum_probs=14.8

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ..|+++++|.|..|++.|.+...|..|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQA   33 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHH
Confidence            34445555555555555555555555544

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=8e-09  Score=65.47  Aligned_cols=33  Identities=27%  Similarity=0.410  Sum_probs=16.7

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCC
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~   37 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQR-THTG   37 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHH-HTTT
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHH-HhCC
Confidence            34455555555555555555555555554 3443

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=8.7e-09  Score=64.52  Aligned_cols=33  Identities=24%  Similarity=0.386  Sum_probs=16.7

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCC
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~   36 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTG   36 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTT-TTSC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHH-hcCC
Confidence            34455555555555555555555555544 3443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=8.6e-09  Score=66.05  Aligned_cols=29  Identities=21%  Similarity=0.255  Sum_probs=14.6

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ..|+++++|.|..|++.|.....|..|++
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQR   33 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHG
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHh
Confidence            34445555555555555555555555544

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=6.8e-09  Score=66.52  Aligned_cols=40  Identities=25%  Similarity=0.287  Sum_probs=20.6

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCE  492 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~  492 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+     ++||+|+
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~-----~~~~~C~   44 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQK-THTG-----EKPSGPS   44 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHH-HHCC-----CCCCCSC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHH-HhCC-----CCCCCCC
Confidence            34555555555555555555555555554 3433     4555554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=7e-09  Score=64.97  Aligned_cols=29  Identities=21%  Similarity=0.284  Sum_probs=14.6

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ..|+++++|.|..|++.|.+...|..|++
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2ytb_A            4 GSSGGEKPYRCDQCGKAFSQKGSLIVHIR   32 (42)
T ss_dssp             CCCCSCCSBCCTTTTCCBSSHHHHHTTGG
T ss_pred             cccCCCCCeeCCCccchhCCHHHHHHHHH
Confidence            34445555555555555555555555544

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=8.8e-09  Score=66.00  Aligned_cols=35  Identities=26%  Similarity=0.408  Sum_probs=16.7

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLTQHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-TTTSSCCSSCSC
T ss_pred             CCCeECCCCCCccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            34444544444444444444444 444444444443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=4.5e-09  Score=66.66  Aligned_cols=34  Identities=26%  Similarity=0.338  Sum_probs=16.7

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR   37 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCC
Confidence            33444 44455555555555555555555555544

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=8.5e-09  Score=65.32  Aligned_cols=34  Identities=29%  Similarity=0.665  Sum_probs=16.3

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      ++||.|++|++.|.....|..|+ ..|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2yu5_A           10 ENPFKCSKCDRVFTQRNYLVQHE-RTHARKSGPSS   43 (44)
T ss_dssp             CCSEECSSSSCEESSSHHHHHHH-HHCCCCCSSCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHh-HhcCCCCCCCC
Confidence            34444444444444444444444 34444444444

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=7.7e-09  Score=66.27  Aligned_cols=35  Identities=23%  Similarity=0.372  Sum_probs=17.4

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      ++||+|++|++.|.....|..|+ ..|+++++|.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yto_A           10 EKPYKCSDCGKAFTRKSGLHIHQ-QSHTGERHSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-HHHTCCCBTTTB
T ss_pred             CCCEECcccCCccCCHhHHHHHH-HHcCCCCCCCCC
Confidence            44455555555555555555554 445555555443

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=9.3e-09  Score=65.14  Aligned_cols=34  Identities=18%  Similarity=0.281  Sum_probs=17.3

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAA   37 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence            34444 44555555555555555555555555554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=6.9e-09  Score=66.51  Aligned_cols=29  Identities=21%  Similarity=0.138  Sum_probs=14.8

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHH
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ..|+++++|.|..|++.|.+...|..|++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eor_A            5 SSGTGEKPYNCEECGKAFIHDSQLQEHQR   33 (46)
T ss_dssp             SSSSCCCSEECTTTCCEESSHHHHHHHHH
T ss_pred             cCcCCCcCccCCCCCCCcCCHHHHHHHHH
Confidence            34445555555555555555555555544

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.5e-08  Score=64.90  Aligned_cols=29  Identities=31%  Similarity=0.613  Sum_probs=14.8

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||.|++|++.|.....|..|+++|++
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2enh_A            9 GEKPYECDVCRKAFSHHASLTQHQRVHSG   37 (46)
T ss_dssp             CSSSCBCTTTCCBCSSSHHHHHHGGGSCC
T ss_pred             CCCCcCCCCcCchhCCHHHHHHHHHHhCC
Confidence            44455555555555555555555555544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.2e-08  Score=64.59  Aligned_cols=34  Identities=29%  Similarity=0.602  Sum_probs=16.5

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      ++||.|++|++.|.....|..|+ ..|++++||.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~~   43 (44)
T 2epv_A           10 EKPYECNECGKAFIWKSLLIVHE-RTHAGVSGPSS   43 (44)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-GGGSSCSCCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHH-hHhcCCCCCCC
Confidence            34455555555555555555554 44444444444

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.5e-08  Score=65.61  Aligned_cols=37  Identities=24%  Similarity=0.346  Sum_probs=18.0

Q ss_pred             CCCcccC--CCCCCCCChHHHHHHHHhhcCCCCccccccc
Q psy12165        423 ELPVTCD--LCSKEWPSRKFMWQHLIRSHKAVAGLACGVC  460 (537)
Q Consensus       423 ~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  460 (537)
                      +++|+|+  .|++.|.....|..|+ ..|++++||.|..|
T Consensus        10 ~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A           10 EKPFACTWPGCGWRFSRSDELSRHR-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHH-TTSCCCCSCSSCCC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4445554  4555555555555554 44555555555444

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.60  E-value=2.6e-08  Score=62.61  Aligned_cols=34  Identities=9%  Similarity=0.145  Sum_probs=15.9

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      +++|.|+.|++.|.....|..|+ ..|++++||.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   41 (43)
T 2yrm_A            8 NGAFFCNECDCRFSEEASLKRHT-LQTHSDKSGPS   41 (43)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHH-HHHTCTTCSSS
T ss_pred             CCCEECCCCCCeeCChHHHHHHH-HhhCCCCCccC
Confidence            34444444444444444444443 34444444444

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2e-08  Score=64.27  Aligned_cols=35  Identities=23%  Similarity=0.214  Sum_probs=18.0

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|+|++|++.|.....|..|+ ..|++++||.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eom_A           10 ERGHRCSDCGKFFLQASNFIQHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCSSSCCCCSSHHHHHHHH-HHHSSCCCSSCC
T ss_pred             CCCcCCCCCCCeeCChHHHHHHH-HHhCCCCCCCCC
Confidence            44555555555555555555554 445555555553

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.7e-08  Score=61.85  Aligned_cols=41  Identities=27%  Similarity=0.267  Sum_probs=36.8

Q ss_pred             CCCCCccccccccccccccccchHHHHHhHHhhCccccccccc
Q psy12165          1 MVHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSC   43 (537)
Q Consensus         1 ~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C   43 (537)
                      |...|++++||.|++|++.|.....|..|++.|  .++++|.|
T Consensus         1 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H--~~~k~~~C   41 (41)
T 2ept_A            1 GSSGSSGQRVYECQECGKSFRQKGSLTLHERIH--TGSGPSSG   41 (41)
T ss_dssp             CCSSCCCCCCEECSSSCCEESSHHHHHHHGGGC--CCCSCSCC
T ss_pred             CCCccCCCCCeECCCCCCCcCCHHHHHHHHHHh--CCCCCcCC
Confidence            457899999999999999999999999999987  56788876

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.1e-08  Score=65.61  Aligned_cols=34  Identities=24%  Similarity=0.390  Sum_probs=16.3

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCcccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLAC  457 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C  457 (537)
                      +++|.|++|++.|.....|..|+ ..|.+++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2eq3_A           10 EKPYECNQCGKAFSVRSSLTTHQ-AIHTGKKPSGP   43 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHH-TTSCCCCCCCS
T ss_pred             CCCeECCCCChhhCCHHHHHHHH-HHhCCCCCCCC
Confidence            34444444444444444444444 44444444444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.59  E-value=1.1e-08  Score=64.07  Aligned_cols=33  Identities=24%  Similarity=0.289  Sum_probs=17.0

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCC
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      ..|+++++|.|..|++.|.+...|..|++ .|.+
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~   36 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQ   36 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHH-HTTC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhh-hcCC
Confidence            34555555555555555555555555554 3443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=7.7e-09  Score=66.27  Aligned_cols=40  Identities=23%  Similarity=0.193  Sum_probs=22.5

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccc
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCE  492 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~  492 (537)
                      ..|+++++|.|..|++.|.....|..|++ .|.+     ++||+|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-----~~~~~C~   44 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLR-VHTQ-----ETLSGPS   44 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHH-HHSS-----CCSSSCC
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHH-HhCC-----CCCCCCC
Confidence            45555556666666666666666666655 3443     4555554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.7e-08  Score=63.90  Aligned_cols=33  Identities=24%  Similarity=0.394  Sum_probs=17.8

Q ss_pred             Hhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        379 IKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       379 ~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++| +++||.|++|++.|.....|..|+++|++
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAG   37 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCC
Confidence            3444 45555555555555555555555555555

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=1.2e-08  Score=65.26  Aligned_cols=35  Identities=29%  Similarity=0.483  Sum_probs=18.2

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCC-CCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKA-VAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~-~~~~~C~  458 (537)
                      ++||.|++|++.|.....|..|+ ..|++ ++||.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~~C~   45 (46)
T 2eoy_A           10 EKCFKCNKCEKTFSCSKYLTQHE-RIHTRGVKSGPSS   45 (46)
T ss_dssp             SCCEECSSSCCEESSSHHHHHHH-TTCCSCCTTSSSC
T ss_pred             CCCEECcCCCCcCCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            44555555555555555555554 44555 5555553

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=2.4e-09  Score=76.68  Aligned_cols=67  Identities=19%  Similarity=0.127  Sum_probs=52.8

Q ss_pred             HHHHHHHhhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        440 FMWQHLIRSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       440 ~l~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      .|..|+ ..|.+.+++.|.+|+..|. ...|..|+  .|.+     .+||.|+.|++.|. ...|..|+++|++...
T Consensus         4 ~L~~H~-~~~c~~r~~~C~~C~~~~~-~~~L~~H~--~~c~-----~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A            4 GSSGHE-ETECPLRLAVCQHCDLELS-ILKLKEHE--DYCG-----ARTELCGNCGRNVL-VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             CCSCCC-CCCCCCCCEECSSSCCEEC-HHHHHHHH--HHHH-----HCEEECSSSCCEEE-TTGGGTHHHHBTTBSS
T ss_pred             HHHhhC-cccCCCcccCCcccChHhh-HHHHHHHH--hHcC-----CCceEcccCCCcCc-HHHHHHHHHHccCCcC
Confidence            456675 6788888899999988884 88888887  3444     68889999998876 5888899988888754

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.1e-08  Score=65.44  Aligned_cols=35  Identities=29%  Similarity=0.487  Sum_probs=20.4

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|+|++|++.|.....|..|+ ..|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emz_A           10 ERPFKCNECGKGFGRRSHLAGHL-RLHSREKSSGPS   44 (46)
T ss_dssp             CCSCCCSSSCCCCSSHHHHHHHH-HHHHHTTCCCSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            45566666666666666666664 455555555554

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.6e-08  Score=64.44  Aligned_cols=35  Identities=20%  Similarity=0.411  Sum_probs=16.6

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      +++|+|++|++.|.....|..|+ ..|+++++|.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (45)
T 2epu_A           10 QKPFECTHCGKSFRAKGNLVTHQ-RIHTGEKSGPSS   44 (45)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHH-TTTSSCCCCCSC
T ss_pred             CcCccCCCCCCccCChHHHHHHH-HHhCCCCCCCCC
Confidence            34444444444444444444443 444444444443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.55  E-value=4.9e-08  Score=61.36  Aligned_cols=41  Identities=20%  Similarity=0.345  Sum_probs=37.2

Q ss_pred             CCCCccccccccccccccccchHHHHHhHHhhCcccccccccc
Q psy12165          2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQ   44 (537)
Q Consensus         2 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~   44 (537)
                      ...|++++||.|++|++.|.....|.+|++.|  .++++|.|.
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H--~~~k~~~C~   42 (43)
T 2yrm_A            2 SSGSSGNGAFFCNECDCRFSEEASLKRHTLQT--HSDKSGPSS   42 (43)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHHHHH--TCTTCSSSC
T ss_pred             CcCcCCCCCEECCCCCCeeCChHHHHHHHHhh--CCCCCccCC
Confidence            35789999999999999999999999999998  567899985

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=3.7e-08  Score=59.36  Aligned_cols=31  Identities=32%  Similarity=0.464  Sum_probs=28.0

Q ss_pred             ccCCccccc--ccccccChhHHHHHHhhhhCCC
Q psy12165        485 EVDNPTCEV--CGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       485 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +++||+|+.  |+++|.+++.|..|+++|+|++
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            379999986  9999999999999999999874

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.1e-08  Score=63.46  Aligned_cols=34  Identities=29%  Similarity=0.426  Sum_probs=18.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++|++.|.....|..|+++|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG   37 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcC
Confidence            44444 45555555555555555555555555554

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=3.9e-08  Score=61.43  Aligned_cols=40  Identities=23%  Similarity=0.160  Sum_probs=36.1

Q ss_pred             CCCCccccccccccccccccchHHHHHhHHhhCccccccccc
Q psy12165          2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSC   43 (537)
Q Consensus         2 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C   43 (537)
                      +..|++++||.|++|++.|.....|..|++.|  .++++|.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H--~~~~~~~C   42 (42)
T 2en2_A            3 SGSSGGEKPYKCETCGARFVQVAHLRAHVLIH--TGSGPSSG   42 (42)
T ss_dssp             CCCCCSSCSEECTTTCCEESSHHHHHHHTHHH--HSCCSSCC
T ss_pred             CcccCCCCCEeCCCcChhhCCHHHHHHHHHHc--CCCCCCCC
Confidence            46789999999999999999999999999988  66788876

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=5.5e-08  Score=62.15  Aligned_cols=42  Identities=17%  Similarity=0.247  Sum_probs=37.8

Q ss_pred             CCCCccccccccccccccccchHHHHHhHHhhCccccccccccc
Q psy12165          2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQV   45 (537)
Q Consensus         2 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~   45 (537)
                      +..|++++||.|++|++.|.....|..|++.|  .++++|.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H--~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIH--TGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHH--SSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHh--CCCCCCCCCC
Confidence            46789999999999999999999999999998  5678999963

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=4.4e-09  Score=75.26  Aligned_cols=12  Identities=25%  Similarity=0.573  Sum_probs=4.5

Q ss_pred             CCCccccccccc
Q psy12165        451 AVAGLACGVCLK  462 (537)
Q Consensus       451 ~~~~~~C~~C~~  462 (537)
                      ++++|.|+.|++
T Consensus        40 ~~~~~~C~~C~~   51 (75)
T 2d9k_A           40 GARTELCGNCGR   51 (75)
T ss_dssp             HHCEEECSSSCC
T ss_pred             CCCceEcccCCC
Confidence            333333333333

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=5.8e-08  Score=62.04  Aligned_cols=41  Identities=20%  Similarity=0.278  Sum_probs=36.9

Q ss_pred             CCCCccccccccccccccccchHHHHHhHHhhCccc-ccccccc
Q psy12165          2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTM-QRRYSCQ   44 (537)
Q Consensus         2 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~-~~~~~C~   44 (537)
                      +..|++++||.|++|++.|.....|..|++.|  .+ +++|.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H--~~~~~~~~C~   45 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIH--TRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTC--CSCCTTSSSC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHc--CCCCCCCCCC
Confidence            46789999999999999999999999999987  56 7899985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=5.9e-08  Score=61.34  Aligned_cols=41  Identities=20%  Similarity=0.301  Sum_probs=36.8

Q ss_pred             CCCCccccccccccccccccchHHHHHhHHhhCcccccccccc
Q psy12165          2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQ   44 (537)
Q Consensus         2 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~   44 (537)
                      +..|++++||.|++|++.|.....|..|++.|  .++++|.|.
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H--~~~~~~~C~   44 (44)
T 2eox_A            4 GSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH--TRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCEEETTTTEEESSSHHHHTTHHHH--CCCCCCSCC
T ss_pred             CcCCCCCCCeECcccCcccCCHHHHHHHHHHh--CCCCCCCCC
Confidence            46789999999999999999999999999998  567888883

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=6.6e-08  Score=61.77  Aligned_cols=41  Identities=20%  Similarity=0.238  Sum_probs=37.2

Q ss_pred             CCCCccccccccccccccccchHHHHHhHHhhCcccccccccc
Q psy12165          2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQ   44 (537)
Q Consensus         2 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~   44 (537)
                      +..|++++||.|++|++.|.....|..|++.|  .++++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H--~~~~~~~C~   44 (46)
T 2en3_A            4 GSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH--ERTDPSGPS   44 (46)
T ss_dssp             CCCSCCCCSEECSSSCCEESSSHHHHHHHHHH--HHSCCSSCS
T ss_pred             ccccCCCCCeeCcccChhhCCHHHHHHHHHHh--CCCCCCCCC
Confidence            45789999999999999999999999999998  667899985

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=9.6e-08  Score=64.52  Aligned_cols=32  Identities=22%  Similarity=0.146  Sum_probs=23.8

Q ss_pred             ccCCccccc--ccccccChhHHHHHH-hhhhCCCc
Q psy12165        485 EVDNPTCEV--CGRYHNARPKLESHL-AVHVGLDK  516 (537)
Q Consensus       485 ~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~g~~~  516 (537)
                      +++||+|.+  |+++|.+.+.|..|+ ++|+|+++
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP   58 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP   58 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC
Confidence            467777765  888887777788886 57777776

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.47  E-value=5.5e-08  Score=58.78  Aligned_cols=29  Identities=21%  Similarity=0.342  Sum_probs=25.4

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ++||+|+.|++.|.+...|..|+++|+|+
T Consensus         9 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            9 IKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            78899999999999999999999988874

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=7.5e-08  Score=58.16  Aligned_cols=31  Identities=16%  Similarity=0.278  Sum_probs=27.5

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ++||.|+.|++.|.+...|..|+++|+|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            7 GRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            7899999999999999999999999998763

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.46  E-value=8.1e-08  Score=57.15  Aligned_cols=31  Identities=19%  Similarity=0.345  Sum_probs=26.7

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      +++|.|+.|++.|.+...|..|+++|+|+++
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6889999999999999999999999888753

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=1.1e-07  Score=61.46  Aligned_cols=42  Identities=21%  Similarity=0.200  Sum_probs=30.7

Q ss_pred             hhcCCCCccccc--ccccccCCHHHHHHHHHhhCCCCcccccCCcccccc
Q psy12165        447 RSHKAVAGLACG--VCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVC  494 (537)
Q Consensus       447 ~~H~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C  494 (537)
                      ..|+++++|.|.  .|++.|.....|..|++ .|.+     ++||+|++|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-----~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSG-----VKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHT-TSCC-----CCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHH-HhCC-----CCCCCCCCC
Confidence            456777777776  67777777777777776 5665     677777766

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.46  E-value=9.1e-08  Score=56.94  Aligned_cols=31  Identities=19%  Similarity=0.324  Sum_probs=27.1

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ++||.|+.|++.|.....|..|+++|+|+++
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6889999999999999999999999988753

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=1.1e-07  Score=60.47  Aligned_cols=39  Identities=21%  Similarity=0.249  Sum_probs=19.9

Q ss_pred             hcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccc
Q psy12165        448 SHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCE  492 (537)
Q Consensus       448 ~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~  492 (537)
                      .|+++++|.|..|++.|.....|..|++ .|.+     ++||.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-----~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQR-IHTG-----EKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHT-TTSS-----CCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHH-HhCC-----CCCCCCC
Confidence            4455555555555555555555555544 3443     4555554

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.3e-07  Score=58.58  Aligned_cols=31  Identities=23%  Similarity=0.449  Sum_probs=14.7

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ++||+|++|++.|.+...|..|+++|+|+++
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   38 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGP   38 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSC
T ss_pred             CCCeECCCCCCCcCCHHHHHHHHHHhCCCCC
Confidence            3444444444444444444444444444443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.41  E-value=1.7e-07  Score=54.81  Aligned_cols=30  Identities=20%  Similarity=0.357  Sum_probs=27.3

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      +||.|+.|++.|.....|..|+++|+|+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            479999999999999999999999999876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.39  E-value=1.5e-07  Score=57.59  Aligned_cols=31  Identities=26%  Similarity=0.392  Sum_probs=26.2

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ++||.|+.|++.|.+.+.|..|+++|+|+++
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            6788888888888888888888888888776

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.4e-07  Score=55.42  Aligned_cols=30  Identities=23%  Similarity=0.391  Sum_probs=26.7

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      ++||+|++|++.|.....|..|+++|+|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            789999999999999999999999998863

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.1e-07  Score=56.13  Aligned_cols=30  Identities=23%  Similarity=0.470  Sum_probs=27.4

Q ss_pred             cCCcccccccccccCh-hHHHHHHhhhhCCC
Q psy12165        486 VDNPTCEVCGRYHNAR-PKLESHLAVHVGLD  515 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~-~~l~~H~~~h~g~~  515 (537)
                      ++||+|+.|++.|... ..|..|+++|+|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            7899999999999999 99999999999864

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.35  E-value=4.4e-07  Score=61.34  Aligned_cols=39  Identities=18%  Similarity=0.235  Sum_probs=26.4

Q ss_pred             CCCCCcccCC--CCCCCCChHHHHHHHHhhcCCCCcccccc
Q psy12165        421 RPELPVTCDL--CSKEWPSRKFMWQHLIRSHKAVAGLACGV  459 (537)
Q Consensus       421 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~~  459 (537)
                      .+++||+|+.  |+++|.....|..|++++|++++||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4466777754  77777777777777656677777776643

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.7e-07  Score=54.57  Aligned_cols=30  Identities=23%  Similarity=0.526  Sum_probs=27.2

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +++|.|++|++.|.+...|..|+++|+|++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            789999999999999999999999998864

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.33  E-value=2.5e-07  Score=55.77  Aligned_cols=34  Identities=21%  Similarity=0.357  Sum_probs=21.0

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|+.|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            44455 56666666666666666666666666654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.4e-07  Score=55.42  Aligned_cols=30  Identities=20%  Similarity=0.232  Sum_probs=26.0

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      ++||+|++|++.|.....|..|+++|+|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            688999999999999999999999888763

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=3.2e-07  Score=54.91  Aligned_cols=30  Identities=17%  Similarity=0.359  Sum_probs=25.3

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      ++||+|+.|++.|.....|..|+++|+|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            688888888888888888888888888753

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=4.3e-07  Score=54.32  Aligned_cols=30  Identities=27%  Similarity=0.491  Sum_probs=26.9

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      ++||.|+.|++.|.....|..|+++|+|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            689999999999999999999999998863

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.27  E-value=5.6e-07  Score=50.66  Aligned_cols=29  Identities=28%  Similarity=0.487  Sum_probs=25.7

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|+.|++.|.....|..|+++|+|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.26  E-value=4.6e-07  Score=55.33  Aligned_cols=37  Identities=19%  Similarity=0.268  Sum_probs=32.2

Q ss_pred             CccccccccccccccccchHHHHHhHHhhCccccccccc
Q psy12165          5 HKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSC   43 (537)
Q Consensus         5 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C   43 (537)
                      |++++||.|++|++.|.....|..|++.|  .++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H--~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVH--RRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTT--CCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHc--CCCcccee
Confidence            57899999999999999999999999987  56677765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.24  E-value=4.6e-07  Score=51.04  Aligned_cols=29  Identities=17%  Similarity=0.296  Sum_probs=25.8

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|+.|++.|.....|..|+++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            47899999999999999999999998863

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.23  E-value=8.8e-07  Score=51.69  Aligned_cols=26  Identities=23%  Similarity=0.381  Sum_probs=12.5

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ||.|++||+.|.....|..|+++|++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~   27 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHEL   27 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTT
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCC
Confidence            44444444444444444444444444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.22  E-value=8.3e-07  Score=50.35  Aligned_cols=30  Identities=17%  Similarity=0.377  Sum_probs=26.7

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ++|.|+.|++.|.....|..|+++|+|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            479999999999999999999999998753

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=4.9e-07  Score=51.35  Aligned_cols=29  Identities=24%  Similarity=0.398  Sum_probs=25.2

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|+.|++.|.....|..|+++|+|++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            68899999999999999999999988763

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=4.1e-07  Score=54.80  Aligned_cols=29  Identities=17%  Similarity=0.259  Sum_probs=22.8

Q ss_pred             cCCcccccccccccChhHHHHH-HhhhhCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESH-LAVHVGL  514 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H-~~~h~g~  514 (537)
                      ++||+|+.|+++|..+..|..| +++|+|+
T Consensus         7 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            7 GHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            6778888888888888888888 7777764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.21  E-value=5.9e-07  Score=50.52  Aligned_cols=29  Identities=28%  Similarity=0.608  Sum_probs=26.1

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|+.|++.|.....|..|+++|+|++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47999999999999999999999999864

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=7.2e-07  Score=53.66  Aligned_cols=33  Identities=21%  Similarity=0.421  Sum_probs=30.6

Q ss_pred             CCCCccccccccccccccccchHHHHHhHHhhC
Q psy12165          2 VHGHKEEAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         2 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      +.+|++++||.|++|++.|.....|..|++.|+
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            467999999999999999999999999999884

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=8.6e-07  Score=49.79  Aligned_cols=29  Identities=24%  Similarity=0.541  Sum_probs=26.5

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|+.|++.|.....|..|+++|+|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47999999999999999999999999864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.20  E-value=8.9e-07  Score=53.62  Aligned_cols=31  Identities=23%  Similarity=0.225  Sum_probs=28.0

Q ss_pred             cCCcccc--cccccccChhHHHHHHhhhhCCCc
Q psy12165        486 VDNPTCE--VCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ++||+|+  .|+++|.+...|..|+++|+|+++
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            6899999  499999999999999999999876

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.20  E-value=8e-07  Score=53.47  Aligned_cols=30  Identities=27%  Similarity=0.588  Sum_probs=27.1

Q ss_pred             cCCccccc--ccccccChhHHHHHHhhhhCCC
Q psy12165        486 VDNPTCEV--CGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       486 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      ++||.|++  |++.|.+.+.|..|+++|+|++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            78999985  9999999999999999999864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=4.7e-07  Score=50.54  Aligned_cols=27  Identities=33%  Similarity=0.781  Sum_probs=23.1

Q ss_pred             CCcccccccccccChhHHHHHHhhhhC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      +||+|+.|++.|.....|..|+++|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            678888888888888888888888875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.17  E-value=9.1e-07  Score=50.72  Aligned_cols=29  Identities=24%  Similarity=0.494  Sum_probs=25.4

Q ss_pred             CCcccc--cccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCE--VCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~--~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|+  .|+++|.+...|..|+++|+|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            478998  89999999999999999998863

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.17  E-value=6e-07  Score=57.72  Aligned_cols=31  Identities=29%  Similarity=0.636  Sum_probs=24.7

Q ss_pred             cCCcccccccccccChhHHHHHHh-hhhCCCc
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLA-VHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~g~~~  516 (537)
                      ++||.|.+|++.|.....|..|++ +|+|+..
T Consensus         5 ~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            5 DKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             TSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            788889999999988888999988 8888765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.17  E-value=1.2e-06  Score=50.63  Aligned_cols=29  Identities=17%  Similarity=0.253  Sum_probs=26.4

Q ss_pred             CCcccc--cccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCE--VCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~--~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|+  .|++.|.+...|..|+++|+|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            689999  89999999999999999999863

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.4e-07  Score=52.29  Aligned_cols=29  Identities=24%  Similarity=0.516  Sum_probs=25.5

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||+|+.|++.|.....|..|+++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47899999999999999999999998863

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.16  E-value=9.7e-08  Score=55.47  Aligned_cols=30  Identities=13%  Similarity=0.195  Sum_probs=27.5

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      +||+|+.|++.|.+.+.|..|+++|+|+++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            479999999999999999999999999876

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.16  E-value=9e-07  Score=48.79  Aligned_cols=27  Identities=26%  Similarity=0.477  Sum_probs=22.5

Q ss_pred             CcccccccccccChhHHHHHHhhhhCC
Q psy12165        488 NPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       488 ~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ||+|+.|++.|.+...|..|+++|+|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            588999999999999999999998873

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.15  E-value=8.9e-07  Score=52.32  Aligned_cols=27  Identities=22%  Similarity=0.272  Sum_probs=25.4

Q ss_pred             CCccccccccccccccccchHHHHHhH
Q psy12165          4 GHKEEAALSCGNCLKVFRDNLSLLKHV   30 (537)
Q Consensus         4 ~~~~~~~~~C~~C~~~f~~~~~L~~H~   30 (537)
                      ++.+|+||.|+.|+++|...+.|.+|+
T Consensus         2 ~~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            2 SLLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CSSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCCccCeECCCCCCccCCHhHccCcC
Confidence            467899999999999999999999997

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=1.4e-06  Score=52.28  Aligned_cols=29  Identities=28%  Similarity=0.485  Sum_probs=20.9

Q ss_pred             cCCcccccc--ccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRV--CGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +++||+|++  |+++|..++.|..|+++|++
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            566777765  77777777777777777766

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.13  E-value=6.8e-08  Score=71.26  Aligned_cols=58  Identities=17%  Similarity=0.141  Sum_probs=37.9

Q ss_pred             hhcCCCCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        447 RSHKAVAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       447 ~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ..|+++++|.|..|++.|.....|..|++ .|.+     ++||+|..|.    ....|..|.++|.|.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~-----ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLN-IHNE-----EFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHH-HHHH-----HHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHH-HhCC-----CCCcccchhh----hHHHHHhhhcccccc
Confidence            35667777777777777777777777766 4554     5677775543    455566666776664

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.42  E-value=3.2e-07  Score=52.20  Aligned_cols=29  Identities=24%  Similarity=0.453  Sum_probs=25.9

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|+.|++.|.+...|..|+++|+|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            68999999999999999999999998763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=6.4e-07  Score=49.49  Aligned_cols=26  Identities=15%  Similarity=0.345  Sum_probs=21.4

Q ss_pred             CCcccccccccccChhHHHHHHhhhh
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      +||+|+.|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            67888888888888888888888774

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=9.4e-07  Score=48.76  Aligned_cols=26  Identities=19%  Similarity=0.410  Sum_probs=21.8

Q ss_pred             CCcccccccccccChhHHHHHHhhhh
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      +||.|+.|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            67888888888888888888888774

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.11  E-value=1.6e-06  Score=51.29  Aligned_cols=31  Identities=19%  Similarity=0.490  Sum_probs=28.8

Q ss_pred             CCccccccccccccccccchHHHHHhHHhhC
Q psy12165          4 GHKEEAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         4 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      +|++++||.|++|++.|.....|..|++.|.
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            4789999999999999999999999999874

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.09  E-value=1.8e-06  Score=51.09  Aligned_cols=31  Identities=32%  Similarity=0.652  Sum_probs=28.8

Q ss_pred             CCccccccccccccccccchHHHHHhHHhhC
Q psy12165          4 GHKEEAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         4 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      +|++++||.|++|++.|.....|..|++.|+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            4789999999999999999999999999874

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.07  E-value=1.2e-06  Score=64.62  Aligned_cols=43  Identities=9%  Similarity=0.195  Sum_probs=38.9

Q ss_pred             CCCccccccccccccccccchHHHHHhHHhhCcccccccccccce
Q psy12165          3 HGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHPTMQRRYSCQVHI   47 (537)
Q Consensus         3 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~C~~c~   47 (537)
                      ..|++++||.|++|++.|.....|..|++.|  .++++|.|..|.
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~H--t~ekp~~C~~~~   60 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIH--NEEFQKRAKRQE   60 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHH--HHHHHHHCCCCS
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHh--CCCCCcccchhh
Confidence            4588999999999999999999999999998  678999998765

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.05  E-value=3.3e-06  Score=57.86  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=25.5

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ++||+|..|++.|.++..|..|+++|+|...
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            6888888888888888888888888888643

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.3e-06  Score=51.41  Aligned_cols=32  Identities=13%  Similarity=0.209  Sum_probs=29.2

Q ss_pred             CCCCccccccccccccccccchHHHHHh-HHhh
Q psy12165          2 VHGHKEEAALSCGNCLKVFRDNLSLLKH-VEEE   33 (537)
Q Consensus         2 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H-~~~~   33 (537)
                      ++.|++++||.|++|++.|.....|..| ++.|
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            4579999999999999999999999999 7765

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.03  E-value=2e-06  Score=48.72  Aligned_cols=29  Identities=28%  Similarity=0.450  Sum_probs=24.3

Q ss_pred             CCcccccccccccChhHHHHH-HhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESH-LAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H-~~~h~g~~  515 (537)
                      +||.|+.|++.|.+...|..| +++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            478899999999999999999 68888763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=8.4e-07  Score=48.44  Aligned_cols=26  Identities=27%  Similarity=0.539  Sum_probs=22.0

Q ss_pred             CCcccccccccccChhHHHHHHhhhh
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      +||.|+.|++.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47888899999988888998888874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=4e-06  Score=49.87  Aligned_cols=31  Identities=13%  Similarity=0.202  Sum_probs=29.0

Q ss_pred             CCccccccccccccccccchHHHHHhHHhhC
Q psy12165          4 GHKEEAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         4 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      +|++++||.|++|++.|.....|..|++.|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            5889999999999999999999999999873

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=4.1e-06  Score=49.86  Aligned_cols=31  Identities=16%  Similarity=0.329  Sum_probs=29.0

Q ss_pred             CCCccccccccccccccccchHHHHHhHHhh
Q psy12165          3 HGHKEEAALSCGNCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus         3 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   33 (537)
                      .+|++++||.|++|++.|.....|..|++.|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            4688999999999999999999999999986

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.94  E-value=3.6e-06  Score=49.66  Aligned_cols=23  Identities=17%  Similarity=0.260  Sum_probs=15.0

Q ss_pred             CCCcccCCCCCCCCChHHHHHHH
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHL  445 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~  445 (537)
                      ++||.|+.|+++|...+.|..|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            55666666666666666666664

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.93  E-value=5.3e-06  Score=49.35  Aligned_cols=32  Identities=16%  Similarity=0.305  Sum_probs=29.3

Q ss_pred             CCCccccccccccccccccchHHHHHhHHhhC
Q psy12165          3 HGHKEEAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         3 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      .+|++++||.|++|++.|.....|..|++.|.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            36889999999999999999999999999863

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.93  E-value=5.1e-06  Score=45.65  Aligned_cols=25  Identities=20%  Similarity=0.433  Sum_probs=14.0

Q ss_pred             CccccccccccCCChHHHHHHHHhc
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEH  409 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h  409 (537)
                      +||.|+.||+.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4555555555555555555555554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.93  E-value=6e-06  Score=49.09  Aligned_cols=31  Identities=19%  Similarity=0.234  Sum_probs=28.9

Q ss_pred             CCccccccccccccccccchHHHHHhHHhhC
Q psy12165          4 GHKEEAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         4 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      +|++++||.|++|++.|.....|..|++.|.
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            5789999999999999999999999999873

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.92  E-value=4.7e-06  Score=49.96  Aligned_cols=31  Identities=23%  Similarity=0.355  Sum_probs=29.0

Q ss_pred             CCCccccccccccccccccch-HHHHHhHHhh
Q psy12165          3 HGHKEEAALSCGNCLKVFRDN-LSLLKHVEEE   33 (537)
Q Consensus         3 ~~~~~~~~~~C~~C~~~f~~~-~~L~~H~~~~   33 (537)
                      .+|++++||.|++|++.|... ..|..|++.|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H   33 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAH   33 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhc
Confidence            468899999999999999999 9999999987

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.90  E-value=4.2e-06  Score=46.04  Aligned_cols=25  Identities=20%  Similarity=0.433  Sum_probs=13.6

Q ss_pred             CccccccccccCCChHHHHHHHHhc
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEH  409 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h  409 (537)
                      +||.|++||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4555555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.89  E-value=5.8e-06  Score=45.85  Aligned_cols=26  Identities=31%  Similarity=0.668  Sum_probs=14.0

Q ss_pred             CccccccccccCCChHHHHHHHHhcc
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEHT  410 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h~  410 (537)
                      +||.|++|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            34555555555555555555555543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.88  E-value=6e-06  Score=49.82  Aligned_cols=35  Identities=17%  Similarity=0.423  Sum_probs=30.2

Q ss_pred             Cccccccccc--cccccccchHHHHHhHHhhCccccccc
Q psy12165          5 HKEEAALSCG--NCLKVFRDNLSLLKHVEEEHPTMQRRY   41 (537)
Q Consensus         5 ~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~h~~~~~~~   41 (537)
                      |++++||.|.  .|++.|.....|.+|++.|  .++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H--~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKH--EMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHH--HTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHh--CCCCCC
Confidence            6789999999  5999999999999999987  455554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=7.1e-06  Score=48.75  Aligned_cols=31  Identities=26%  Similarity=0.421  Sum_probs=28.7

Q ss_pred             CCccccccccccccccccchHHHHHhHHhhC
Q psy12165          4 GHKEEAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         4 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      +|++++||.|++|++.|.....|..|++.|.
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            5788999999999999999999999999873

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.87  E-value=2.9e-05  Score=53.12  Aligned_cols=31  Identities=23%  Similarity=0.584  Sum_probs=24.6

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccCCC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTDVP  413 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  413 (537)
                      +++||.|.+|++.|.....|..|+++|++..
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            5678888888888888888888888887753

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.86  E-value=3.2e-06  Score=53.95  Aligned_cols=30  Identities=20%  Similarity=0.335  Sum_probs=26.3

Q ss_pred             cCCcccc--cccccccChhHHHHHHhhhhCCC
Q psy12165        486 VDNPTCE--VCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       486 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      ++||+|+  .|+++|.+.+.|..|+++|+|++
T Consensus        16 ~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            7899996  69999999999999999998864

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.85  E-value=5.8e-06  Score=46.24  Aligned_cols=27  Identities=41%  Similarity=0.699  Sum_probs=23.4

Q ss_pred             CCcccc--cccccccChhHHHHHHhhhhC
Q psy12165        487 DNPTCE--VCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       487 ~~~~C~--~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      ++|.|+  .|++.|.+.+.|..|+++|+|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468899  999999999999999998875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.80  E-value=1.4e-05  Score=51.19  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=20.7

Q ss_pred             cCCCCcccccccccccCCHHHHHHHHHhhCCC
Q psy12165        449 HKAVAGLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       449 H~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      |+++++|.|.+|++.|.....|..|++..|.+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            56666666666666666666666666545554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.74  E-value=2e-05  Score=43.93  Aligned_cols=26  Identities=35%  Similarity=0.649  Sum_probs=16.0

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ||.|++|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            55666666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=1.6e-05  Score=44.71  Aligned_cols=27  Identities=30%  Similarity=0.559  Sum_probs=15.1

Q ss_pred             CccccccccccCCChHHHHHHHHhccC
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +||.|+.|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            455555555555555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.71  E-value=1.9e-05  Score=43.19  Aligned_cols=26  Identities=23%  Similarity=0.519  Sum_probs=14.1

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ||.|++|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35555555555555555555555543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.70  E-value=1.6e-05  Score=44.35  Aligned_cols=26  Identities=23%  Similarity=0.470  Sum_probs=16.2

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            56666666666666666666666654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.70  E-value=2e-06  Score=49.67  Aligned_cols=29  Identities=17%  Similarity=0.440  Sum_probs=14.1

Q ss_pred             CcccCCCCCCCCChHHHHHHHHhhcCCCCc
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHLIRSHKAVAG  454 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~  454 (537)
                      ||.|+.|++.|.....|..|+ ..|++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~-~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHI-KTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSST-TSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHH-HHHccCCC
Confidence            344555555555555555554 44444444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.68  E-value=3e-05  Score=43.58  Aligned_cols=27  Identities=22%  Similarity=0.668  Sum_probs=13.2

Q ss_pred             CcccCCCCCCCCChHHHHHHHHhhcCC
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHLIRSHKA  451 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  451 (537)
                      ||.|+.|++.|.....|..|+...|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            355555555555555555553244443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.86  E-value=5.7e-06  Score=44.96  Aligned_cols=24  Identities=29%  Similarity=0.620  Sum_probs=12.4

Q ss_pred             ccccccccccCCChHHHHHHHHhc
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEH  409 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h  409 (537)
                      ||.|++||+.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555444

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.67  E-value=3.1e-05  Score=43.48  Aligned_cols=26  Identities=19%  Similarity=0.411  Sum_probs=14.8

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ||.|++|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcc
Confidence            45555555555555555555555554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.65  E-value=2.3e-05  Score=46.79  Aligned_cols=30  Identities=20%  Similarity=0.285  Sum_probs=27.7

Q ss_pred             CCcccccccccc--ccccccchHHHHHhHHhh
Q psy12165          4 GHKEEAALSCGN--CLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus         4 ~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~   33 (537)
                      .|++++||.|.+  |++.|.....|.+|++.|
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   33 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWH   33 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            378999999995  999999999999999987

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.63  E-value=2.6e-05  Score=43.43  Aligned_cols=26  Identities=38%  Similarity=0.758  Sum_probs=15.9

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ||.|++|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            55666666666666666666666554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.62  E-value=2.6e-05  Score=43.36  Aligned_cols=26  Identities=31%  Similarity=0.525  Sum_probs=14.3

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            45555555555555555555555544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.61  E-value=3.8e-05  Score=44.01  Aligned_cols=27  Identities=22%  Similarity=0.471  Sum_probs=14.8

Q ss_pred             Cccccc--cccccCCChHHHHHHHHhccC
Q psy12165        385 HLVNCR--VCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       385 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +||.|+  .|++.|.....|..|+++|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            455555  555555555555555555554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.58  E-value=0.00013  Score=49.62  Aligned_cols=56  Identities=16%  Similarity=0.312  Sum_probs=35.4

Q ss_pred             cccc--cccccCCHHHHHHHHHhhCCCCccc-ccCCcccc--cccccccChhHHHHHHhhh
Q psy12165        456 ACGV--CLKISETYEALALHLDQAHPGYFAE-EVDNPTCE--VCGRYHNARPKLESHLAVH  511 (537)
Q Consensus       456 ~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~-~~~~~~C~--~C~~~f~~~~~l~~H~~~h  511 (537)
                      .|..  |++.|.+...|..|+...|.+...+ +..+|.|.  -|++.+.....|..|++..
T Consensus         3 ~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            3 KCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4544  6777777777777776566552211 12367776  5777777777777777754

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.70  E-value=1.1e-05  Score=45.06  Aligned_cols=26  Identities=31%  Similarity=0.704  Sum_probs=15.0

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ||.|++|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45555666666555556666555554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.54  E-value=9.9e-06  Score=51.62  Aligned_cols=34  Identities=15%  Similarity=0.410  Sum_probs=23.3

Q ss_pred             hHhhh-cCCccccc--cccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCR--VCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |...| +++||.|+  .|++.|...+.|..|+++|++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            33445 67777774  577777777777777777765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.68  E-value=1.2e-05  Score=45.31  Aligned_cols=27  Identities=26%  Similarity=0.405  Sum_probs=14.4

Q ss_pred             CccccccccccCCChHHHHHHHHhccC
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +||.|+.|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            345555555555555555555555543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.53  E-value=7.6e-05  Score=42.29  Aligned_cols=26  Identities=35%  Similarity=0.609  Sum_probs=11.6

Q ss_pred             ccccc--cccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCR--VCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~--~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ||.|+  .||+.|.....|..|+++|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            34443  444444444444444444443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.40  E-value=7.5e-05  Score=41.44  Aligned_cols=25  Identities=32%  Similarity=0.635  Sum_probs=14.6

Q ss_pred             ccccc--cccccCCChHHHHHHHHhcc
Q psy12165        386 LVNCR--VCGSIFHSEPELKVHLEEHT  410 (537)
Q Consensus       386 ~~~C~--~C~~~f~~~~~L~~H~~~h~  410 (537)
                      ||.|+  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  56666666666666655554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.38  E-value=0.00036  Score=47.37  Aligned_cols=48  Identities=23%  Similarity=0.439  Sum_probs=30.2

Q ss_pred             CCCCCCChHHHHHHHHhhcCCCC------ccccc--ccccccCCHHHHHHHHHhhC
Q psy12165        431 CSKEWPSRKFMWQHLIRSHKAVA------GLACG--VCLKISETYEALALHLDQAH  478 (537)
Q Consensus       431 C~~~f~~~~~l~~H~~~~H~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~H  478 (537)
                      |++.|.+...|..|+...|.+.+      +|.|.  -|++.+.....|..|++..|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            66666666666666655665443      56665  46666666666666666544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.00  E-value=0.0054  Score=48.22  Aligned_cols=26  Identities=19%  Similarity=0.428  Sum_probs=20.8

Q ss_pred             CCccccccccccccChhHHHHhH--hhh
Q psy12165        357 KKPYACRICARLLGNGVKVSEHI--KLH  382 (537)
Q Consensus       357 ~~~~~C~~C~~~f~~~~~l~~H~--~~H  382 (537)
                      .+++.|.+|+..|.+.+.+..|.  +.|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH   57 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKH   57 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHH
Confidence            46688888888888888888887  456

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.83  E-value=0.0029  Score=48.60  Aligned_cols=30  Identities=20%  Similarity=0.352  Sum_probs=27.7

Q ss_pred             CCccccccccccccccccchHHHHHhHHhh
Q psy12165          4 GHKEEAALSCGNCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus         4 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   33 (537)
                      .|++++||.|..|++.|.+...|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            478999999999999999999999999865

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.70  E-value=0.015  Score=45.59  Aligned_cols=65  Identities=17%  Similarity=0.229  Sum_probs=46.2

Q ss_pred             CceeecccchhhccChHHHHHHH--hhcCC----------CCCC--------CCCCCCCCCCCccccccchhccCCHHHH
Q psy12165        165 ESVHICHLCQKQFKQNWLLQKHK--KTCKG----------PKRP--------TSPLPEPDEDGIFRCKKCVKVFVNPDIY  224 (537)
Q Consensus       165 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~~----------~~~~--------~~~~~~~~~~~~~~C~~C~~~f~~~~~l  224 (537)
                      .+++.|.+|+..|.+...+..|.  +.|..          ...+        ............|.|..|++.|.+...|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHH
Confidence            46789999999999999999998  33311          0000        0000112335578999999999999999


Q ss_pred             HHHHH
Q psy12165        225 KKHLK  229 (537)
Q Consensus       225 ~~H~~  229 (537)
                      ..|+.
T Consensus       110 ~~H~~  114 (127)
T 1zu1_A          110 ESHYI  114 (127)
T ss_dssp             HHHHT
T ss_pred             HHHHC
Confidence            99975

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.54  E-value=0.022  Score=47.53  Aligned_cols=75  Identities=16%  Similarity=0.258  Sum_probs=35.9

Q ss_pred             cccccccChhHHHHhHhhhcCCccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHH
Q psy12165        364 ICARLLGNGVKVSEHIKLHGEHLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQ  443 (537)
Q Consensus       364 ~C~~~f~~~~~l~~H~~~H~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  443 (537)
                      .|+..+. ...|..|+..=.-.++.|+.|+..+ ....|..|+...-.           .++-.|+.|+..+ ....|..
T Consensus        89 GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~-----------~r~~~C~~C~~~~-~~~~l~~  154 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCP-----------RRQVSCDNCAASM-AFEDKEI  154 (170)
T ss_dssp             TCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCT-----------TCEEECTTTCCEE-EGGGHHH
T ss_pred             CCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCC-----------CCCeECCCCCCcc-CHHHHHh
Confidence            3444433 3345555432244455565555554 44445555543333           3445566665555 4455555


Q ss_pred             HHHhhcCCCC
Q psy12165        444 HLIRSHKAVA  453 (537)
Q Consensus       444 H~~~~H~~~~  453 (537)
                      |. .+++|+.
T Consensus       155 H~-~~~~~~~  163 (170)
T 3hcs_A          155 HD-QNCPLAL  163 (170)
T ss_dssp             HH-TTCCC--
T ss_pred             HH-HhCcChh
Confidence            54 4554443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.53  E-value=0.0081  Score=36.32  Aligned_cols=27  Identities=22%  Similarity=0.223  Sum_probs=24.2

Q ss_pred             ccccccccccccccchHHHHHhHHhhC
Q psy12165          8 EAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         8 ~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      ..+|.|+.|+..|.....|+.||+-.-
T Consensus        10 ~~~~~CPrCn~~f~~~~sLr~HmkycC   36 (49)
T 2e72_A           10 GGRKICPRCNAQFRVTEALRGHMCYCC   36 (49)
T ss_dssp             SSCCCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred             CCceeCCcccccccchHHHHhhhhhcC
Confidence            379999999999999999999998553

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.07  E-value=0.015  Score=32.91  Aligned_cols=28  Identities=29%  Similarity=0.607  Sum_probs=25.0

Q ss_pred             ccccCCCcCcCCChHHHHHHHHhhcCCC
Q psy12165         96 MYVCDLCPKYYSRSTHLWKHVNRVHKGH  123 (537)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  123 (537)
                      -|.||+|.+.|.+...|..|+...|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            3899999999999999999999888753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.00  E-value=0.025  Score=34.24  Aligned_cols=31  Identities=13%  Similarity=0.177  Sum_probs=26.2

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCCc
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLDK  516 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~  516 (537)
                      ..+|.|+.|+..|.....|+.||+-.-++..
T Consensus        10 ~~~~~CPrCn~~f~~~~sLr~HmkycCp~~v   40 (49)
T 2e72_A           10 GGRKICPRCNAQFRVTEALRGHMCYCCPEMV   40 (49)
T ss_dssp             SSCCCCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred             CCceeCCcccccccchHHHHhhhhhcCcchh
Confidence            3689999999999999999999997666543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.92  E-value=0.0064  Score=46.71  Aligned_cols=24  Identities=25%  Similarity=0.520  Sum_probs=15.6

Q ss_pred             cCCcccccccccccChhHHHHHHh
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLA  509 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~  509 (537)
                      +++|.|..|++.|.+...|..|++
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CcceEcccCcchhCCHHHHHHHHh
Confidence            566666666666666666666654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.54  E-value=0.017  Score=48.31  Aligned_cols=98  Identities=17%  Similarity=0.263  Sum_probs=62.9

Q ss_pred             ccCCCcCcCCCh-----HHHHHHHHhhcCCCCCccc--cccCCcccChHHHHHHHHhcCCCCCCCCccccccCCCceeec
Q psy12165         98 VCDLCPKYYSRS-----THLWKHVNRVHKGHPDVTC--RICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHIC  170 (537)
Q Consensus        98 ~C~~C~~~f~~~-----~~l~~H~~~~H~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~C  170 (537)
                      .||.|...+...     ..+..-+     ..-.+.|  .-|+..+. ...|..|+..-               .-.+..|
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i-----~~l~v~C~n~GC~~~~~-~~~l~~H~~~C---------------~~~~v~C  113 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREI-----LSLMVKCPNEGCLHKME-LRHLEDHQAHC---------------EFALMDC  113 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHH-----HTSEEECCSTTCCCEEE-GGGHHHHHTTC---------------TTSEEEC
T ss_pred             CCCCCccCcchhhhhhhHHHHHHH-----hhcccCCCCCCCCceec-HhHHHHHHhcC---------------CceeeEC
Confidence            788888776543     1222222     1234667  45777665 56777887554               3567788


Q ss_pred             ccchhhccChHHHHHHHhhcCCCCCCCCCCCCCCCCCccccccchhccCCHHHHHHHHHhc
Q psy12165        171 HLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVFVNPDIYKKHLKHS  231 (537)
Q Consensus       171 ~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  231 (537)
                      +.|+..+ ....|..|+...-+.+             +..|+.|+..+. ...|..|....
T Consensus       114 ~~C~~~~-~r~~l~~H~~~~C~~r-------------~~~C~~C~~~~~-~~~l~~H~~~~  159 (170)
T 3hcs_A          114 PQCQRPF-QKFHINIHILKDCPRR-------------QVSCDNCAASMA-FEDKEIHDQNC  159 (170)
T ss_dssp             TTTCCEE-EGGGHHHHHHHTCTTC-------------EEECTTTCCEEE-GGGHHHHHTTC
T ss_pred             CCCChHH-HHHHHHHHhhhhCCCC-------------CeECCCCCCccC-HHHHHhHHHhC
Confidence            8888877 5667888887665555             567888888764 45567776543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.38  E-value=0.03  Score=31.71  Aligned_cols=26  Identities=27%  Similarity=0.571  Sum_probs=16.6

Q ss_pred             cccccccccccCCHHHHHHHHHhhCC
Q psy12165        454 GLACGVCLKISETYEALALHLDQAHP  479 (537)
Q Consensus       454 ~~~C~~C~~~f~~~~~l~~H~~~~H~  479 (537)
                      +|-|+.|.+.|.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            46666666666666666666666664

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.04  E-value=0.22  Score=26.99  Aligned_cols=24  Identities=29%  Similarity=0.509  Sum_probs=17.2

Q ss_pred             cccccccccCCHHHHHHHHHhhCC
Q psy12165        456 ACGVCLKISETYEALALHLDQAHP  479 (537)
Q Consensus       456 ~C~~C~~~f~~~~~l~~H~~~~H~  479 (537)
                      -|.+|.+.+..-.+|..|++..|.
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            477777777777777777776663

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=89.19  E-value=0.25  Score=28.05  Aligned_cols=26  Identities=23%  Similarity=0.313  Sum_probs=22.9

Q ss_pred             ccccccccccccccccchHHHHHhHH
Q psy12165          6 KEEAALSCGNCLKVFRDNLSLLKHVE   31 (537)
Q Consensus         6 ~~~~~~~C~~C~~~f~~~~~L~~H~~   31 (537)
                      .+...+.|..|+.+|.+..+++.|.+
T Consensus         4 ~~~~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            4 AEVMKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCCCCSEETTTTEECSSHHHHHHHHH
T ss_pred             CccCcCeeccccceehhhHHHhhhhe
Confidence            35678999999999999999999965

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.72  E-value=0.33  Score=26.34  Aligned_cols=25  Identities=32%  Similarity=0.674  Sum_probs=22.4

Q ss_pred             ccccccccccccchHHHHHhHHhhC
Q psy12165         10 ALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus        10 ~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      .--|..|.+.|++-..|..|+++.|
T Consensus         9 kqhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3469999999999999999999876

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=82.96  E-value=2.2  Score=26.65  Aligned_cols=45  Identities=20%  Similarity=0.406  Sum_probs=29.1

Q ss_pred             cccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCC-CCCChHHHHHHH
Q psy12165        387 VNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSK-EWPSRKFMWQHL  445 (537)
Q Consensus       387 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~-~f~~~~~l~~H~  445 (537)
                      ..|++|..-.-+...|..|....-.              =+||+|-. .-++.++|+.|.
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~--------------gqCPYC~~~~e~tesAlQaHf   49 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCIN--------------GQCPYCMTITEATESALQAHY   49 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTT--------------TBCTTTCCBCCSSHHHHHHHH
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCC--------------CCCCcccCcCCcCHHHHHHHH
Confidence            3577777777777777777766544              45777643 346667777776

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.18  E-value=1.5  Score=24.86  Aligned_cols=22  Identities=23%  Similarity=0.338  Sum_probs=20.6

Q ss_pred             ccccccchhccCCHHHHHHHHH
Q psy12165        208 IFRCKKCVKVFVNPDIYKKHLK  229 (537)
Q Consensus       208 ~~~C~~C~~~f~~~~~l~~H~~  229 (537)
                      .+.|..|+..|.+...+..|.+
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhhhe
Confidence            6899999999999999999987

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=81.17  E-value=0.98  Score=31.10  Aligned_cols=49  Identities=24%  Similarity=0.346  Sum_probs=28.9

Q ss_pred             CCCCccccccCCcccChHHHHHHHHhcCCCCCCCCccccccCCCceeecccchhhccChHHHHHH
Q psy12165        122 GHPDVTCRICSKVSSSRGHLEKHLIAHDNPNTEVDEPQMNEFGESVHICHLCQKQFKQNWLLQKH  186 (537)
Q Consensus       122 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  186 (537)
                      ....|.|+.|+..+. +..|..|...-.              +...|.|..|++.|.. ..++.|
T Consensus         7 ~MV~F~C~~Cgd~lK-K~kv~~H~~~Cr--------------~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            7 GMVFFTCNACGESVK-KIQVEKHVSNCR--------------NCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CCCEEEESSSCCEEE-TTHHHHHHHHCT--------------TCCEEEETTTTEEEEG-GGTTTC
T ss_pred             ceeEEEcCCCCCeee-cccchhHHhhCC--------------CCCcEEecccCCeeCC-CCEeCE
Confidence            344566777776666 455666765542              3345777777777764 344445

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=80.97  E-value=0.33  Score=33.09  Aligned_cols=19  Identities=11%  Similarity=0.463  Sum_probs=11.9

Q ss_pred             cccCCCCCCCCChHHHHHHH
Q psy12165        426 VTCDLCSKEWPSRKFMWQHL  445 (537)
Q Consensus       426 ~~C~~C~~~f~~~~~l~~H~  445 (537)
                      -+||+||... ....|...|
T Consensus         9 ~~~PlCG~~L-~W~eLIeQM   27 (95)
T 2k5c_A            9 AKCPICGSPL-KWEELIEEM   27 (95)
T ss_dssp             EECSSSCCEE-CHHHHHHHS
T ss_pred             ccCCcCCCcc-CHHHHHHHH
Confidence            5677777766 455555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	537
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.5
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.5
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.11
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.11
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.1
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.1
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.06
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.05
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.04
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.95
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.95
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.92
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.88
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.86
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.84
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.83
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.83
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.82
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.82
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.81
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.8
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.79
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.76
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.68
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.66
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.62
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.61
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.6
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.59
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.54
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.48
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.45
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.44
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.42
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.42
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.38
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.28
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.27
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.2
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.19
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.12
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.11
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.08
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.02
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.97
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.96
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.93
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.83
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.83
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.75
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.68
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.61
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.59
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.59
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.59
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.53
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.49
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.46
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.45
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.43
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.43
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.34
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.26
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.23
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.2
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.18
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.01
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.99
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.96
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.94
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.89
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.82
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.81
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.81
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.8
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.72
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.64
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.59
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.46
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.41
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.39
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.26
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.13
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	96.11
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.91
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.87
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.85
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.82
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.7
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.52
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.52
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.51
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.36
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.07
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.9
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.56
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.47
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.34
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.16
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.9
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.7
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.44
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.37
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.29
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.9
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.78
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.09
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	91.38
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.85
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.71
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.71
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.57
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.3
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	89.14
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.83
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.54
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.55
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	87.47
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	87.36
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	86.99
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	86.04
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	84.76
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	84.38
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	84.18
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	83.71
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.88
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	82.56

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.1e-15  Score=96.68  Aligned_cols=53  Identities=25%  Similarity=0.453  Sum_probs=41.7

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccccccccccChhHHHHHHhhh
Q psy12165        452 VAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVH  511 (537)
Q Consensus       452 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  511 (537)
                      ++||.|. |++.|..+..|..|++ .|++     ++||.|++||++|.+.+.|..||++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~-~Ht~-----ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMS-MHLG-----LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHH-HHSC-----CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhh-cccc-----ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4678884 8888888888888876 6776     67888888888888888888888776

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=5.8e-15  Score=95.93  Aligned_cols=49  Identities=24%  Similarity=0.632  Sum_probs=25.3

Q ss_pred             CccccccccccCCChHHHHHHHHhccCCCCCccCCCCCCCCcccCCCCCCCCChHHHHHHH
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEHTDVPETKEQKPRPELPVTCDLCSKEWPSRKFMWQHL  445 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  445 (537)
                      +||.|. ||+.|.....|..|+++|++           ++||.|++||++|.....|..|+
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~-----------ekpy~C~~C~k~F~~~~~L~~H~   50 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLG-----------LRPYGCGVCGKKFKMKHHLVGHM   50 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSC-----------CCSEECTTTSCEESSSHHHHHHH
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhcccc-----------ccCCcCCCcCCEecCHHHHHHHH
Confidence            455552 55555555555555555555           44555555555555555555554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2e-11  Score=71.19  Aligned_cols=36  Identities=19%  Similarity=0.442  Sum_probs=20.2

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      ++||+|++||+.|.....|..|++.+|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            345555555555555555555554455555555554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.7e-11  Score=68.42  Aligned_cols=33  Identities=30%  Similarity=0.502  Sum_probs=29.8

Q ss_pred             hCCCCcccccCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        477 AHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       477 ~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      +|++     ++||+|..|+++|.+++.|..|+++|+|+
T Consensus         1 IHTg-----ekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSG-----EKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTT-----CCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCC-----CCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            3666     89999999999999999999999999985

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.10  E-value=1.9e-11  Score=66.21  Aligned_cols=29  Identities=28%  Similarity=0.487  Sum_probs=27.4

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||+|++|+++|++++.|.+||++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=1.5e-11  Score=65.68  Aligned_cols=28  Identities=25%  Similarity=0.557  Sum_probs=26.8

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      ++||+|++|+++|.+++.|..||++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4899999999999999999999999998

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=6.5e-11  Score=68.97  Aligned_cols=36  Identities=22%  Similarity=0.300  Sum_probs=20.9

Q ss_pred             CCcccccccccccCCHHHHHHHHHhhCCCCcccccCCcccc
Q psy12165        452 VAGLACGVCLKISETYEALALHLDQAHPGYFAEEVDNPTCE  492 (537)
Q Consensus       452 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~  492 (537)
                      ++||.|..|++.|.....|.+|++.+|++     ++||+|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~-----ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTS-----ERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCC-----CCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCC-----CcCcCCc
Confidence            45566666666666666666665545555     5566554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5e-11  Score=64.35  Aligned_cols=29  Identities=17%  Similarity=0.355  Sum_probs=27.5

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|++|+++|.+++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999985

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=1.6e-11  Score=71.96  Aligned_cols=36  Identities=19%  Similarity=0.328  Sum_probs=31.0

Q ss_pred             HHHhhCCCCcccccCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        473 HLDQAHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       473 H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      |++ .|++     ++||+|+.||++|...++|..|+++|+|+
T Consensus         3 H~~-~Ht~-----ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEW-QQRE-----RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCS-CCCC-----SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCc-ccCC-----CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            444 6666     89999999999999999999999999985

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.7e-10  Score=66.34  Aligned_cols=33  Identities=18%  Similarity=0.360  Sum_probs=27.6

Q ss_pred             hCCCCcccccCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        477 AHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       477 ~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      +|+|     ++||+|++|+++|..++.|..|+++|+++
T Consensus         2 ~HTg-----ekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTG-----EKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCC-----CCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCC-----CCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5666     78888888888888888888888888875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.95  E-value=1.7e-10  Score=65.28  Aligned_cols=29  Identities=21%  Similarity=0.391  Sum_probs=25.4

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ++||+|++|++.|+++++|..||++|++.
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CccccCCCCCCcccChHHHHHHccccCCc
Confidence            78999999999999999999999988864

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.2e-10  Score=68.11  Aligned_cols=34  Identities=24%  Similarity=0.409  Sum_probs=22.8

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+++| +++||.|++||++|...++|..|+++|++
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            55566 66666666666666666666666666665

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.92  E-value=1.7e-10  Score=66.88  Aligned_cols=32  Identities=22%  Similarity=0.364  Sum_probs=27.0

Q ss_pred             hCCCCcccccCCcccccccccccChhHHHHHHhhhhC
Q psy12165        477 AHPGYFAEEVDNPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       477 ~H~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      .|++     ++||+|+.|+++|.++++|..|+++|.+
T Consensus         5 ~HTg-----eKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           5 GSTG-----IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TTCC-----SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             ccCC-----ccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            6766     7888888888888888888888888875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=3.9e-10  Score=65.38  Aligned_cols=34  Identities=21%  Similarity=0.357  Sum_probs=23.1

Q ss_pred             hHhhh-cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        378 HIKLH-GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       378 H~~~H-~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |.++| |++||+|++|+++|..+++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            45566 67777777777777777777777776654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=6.6e-10  Score=61.89  Aligned_cols=29  Identities=34%  Similarity=0.571  Sum_probs=19.5

Q ss_pred             cCCccccccccccCCChHHHHHHHHhccC
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |++||+|.+||++|...+.|..|+++|++
T Consensus         4 gekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           4 GEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            56666666666666666666666666665

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=6.2e-10  Score=59.28  Aligned_cols=28  Identities=29%  Similarity=0.636  Sum_probs=21.3

Q ss_pred             CCccccccccccCCChHHHHHHHHhccC
Q psy12165        384 EHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       384 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+||+|++|+++|..+++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5677777777777777777777777765

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=9e-10  Score=59.70  Aligned_cols=28  Identities=25%  Similarity=0.507  Sum_probs=26.2

Q ss_pred             CCccccc--ccccccChhHHHHHHhhhhCC
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      +||+|++  |+++|.+.+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5899999  999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=6.4e-10  Score=57.46  Aligned_cols=26  Identities=23%  Similarity=0.479  Sum_probs=24.5

Q ss_pred             CCcccccccccccChhHHHHHHhhhh
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      +||+|+.||++|...+.|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999996

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=9.4e-10  Score=63.04  Aligned_cols=33  Identities=21%  Similarity=0.412  Sum_probs=30.7

Q ss_pred             CCCccccccccccccccccchHHHHHhHHhhCc
Q psy12165          3 HGHKEEAALSCGNCLKVFRDNLSLLKHVEEEHP   35 (537)
Q Consensus         3 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~   35 (537)
                      ++|++|+||+|++|++.|.....|.+|++.+|.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            579999999999999999999999999988773

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1e-09  Score=63.01  Aligned_cols=32  Identities=31%  Similarity=0.548  Sum_probs=30.5

Q ss_pred             CCCccccccccccccccccchHHHHHhHHhhC
Q psy12165          3 HGHKEEAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         3 ~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      ++|++|+||.|.+|+++|.....|..|++.|+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            57999999999999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=8e-10  Score=60.05  Aligned_cols=28  Identities=25%  Similarity=0.565  Sum_probs=26.2

Q ss_pred             CCccccc--ccccccChhHHHHHHhhhhCC
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      +||.|++  |+++|++.+.|..|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899988  999999999999999999996

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.1e-09  Score=62.76  Aligned_cols=28  Identities=11%  Similarity=0.226  Sum_probs=17.0

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      ++||+|++|+++|.++++|..|++.+++
T Consensus         6 ekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           6 EKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CCCEeCCCCcccccchHHHHHHcccccC
Confidence            5666666666666666666666554444

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=1.2e-09  Score=61.78  Aligned_cols=30  Identities=20%  Similarity=0.510  Sum_probs=28.8

Q ss_pred             CCccccccccccccccccchHHHHHhHHhh
Q psy12165          4 GHKEEAALSCGNCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus         4 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   33 (537)
                      +|++|+||+|++|++.|.....|.+|++.|
T Consensus         1 g~TGekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           1 GSSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCCccccCCCCCCcccChHHHHHHcccc
Confidence            589999999999999999999999999987

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.9e-09  Score=59.16  Aligned_cols=29  Identities=24%  Similarity=0.477  Sum_probs=26.2

Q ss_pred             CCccccc--ccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +||.|++  |+++|++.++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5899964  9999999999999999999985

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.68  E-value=6.2e-09  Score=56.14  Aligned_cols=27  Identities=33%  Similarity=0.632  Sum_probs=17.6

Q ss_pred             CccccccccccCCChHHHHHHHHhccC
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +||.|++||++|...+.|..|+++|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC
Confidence            466666666666666666666666665

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.66  E-value=6.3e-10  Score=68.12  Aligned_cols=39  Identities=15%  Similarity=0.261  Sum_probs=32.4

Q ss_pred             HHHHHHhhCCCCcccccCCccccc--ccccccChhHHHHHHhhhhCCC
Q psy12165        470 LALHLDQAHPGYFAEEVDNPTCEV--CGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       470 l~~H~~~~H~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      |..|+.  |.+     ++||+|++  |+++|..++.|..|+++|+|++
T Consensus         7 l~~h~~--h~g-----ekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK--EMP-----DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCE--EET-----TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhh--ccC-----CCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            445552  555     79999988  9999999999999999999975

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.2e-08  Score=54.85  Aligned_cols=27  Identities=22%  Similarity=0.501  Sum_probs=18.1

Q ss_pred             CccccccccccCCChHHHHHHHHhccC
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +||.|++||++|..++.|..|+++|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            466666666666666666666666666

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=7.2e-09  Score=53.46  Aligned_cols=26  Identities=31%  Similarity=0.521  Sum_probs=17.6

Q ss_pred             CccccccccccCCChHHHHHHHHhcc
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEHT  410 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h~  410 (537)
                      +||+|..||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46667777777777777777766664

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.60  E-value=7.3e-09  Score=55.48  Aligned_cols=27  Identities=30%  Similarity=0.662  Sum_probs=25.3

Q ss_pred             CCccccc--ccccccChhHHHHHHhhhhC
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g  513 (537)
                      +||+|++  |+++|.+.+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899988  99999999999999999997

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.1e-08  Score=49.58  Aligned_cols=26  Identities=38%  Similarity=0.894  Sum_probs=23.8

Q ss_pred             CcccccccccccChhHHHHHHhhhhC
Q psy12165        488 NPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       488 ~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      |.+|++|++.|+++..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46899999999999999999999987

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.8e-08  Score=57.37  Aligned_cols=25  Identities=36%  Similarity=0.763  Sum_probs=12.9

Q ss_pred             ccccc--ccccCCChHHHHHHHHhccC
Q psy12165        387 VNCRV--CGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       387 ~~C~~--C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |.|+.  ||++|.....|++|+++|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg   28 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD   28 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC
Confidence            34444  55555555555555555555

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.48  E-value=4.3e-08  Score=53.84  Aligned_cols=29  Identities=17%  Similarity=0.238  Sum_probs=25.8

Q ss_pred             cCCccccc--ccccccChhHHHHHHhhhhCC
Q psy12165        486 VDNPTCEV--CGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       486 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ++||.|++  |+++|++.+.|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            47999988  999999999999999999863

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=2.5e-08  Score=56.74  Aligned_cols=32  Identities=22%  Similarity=0.586  Sum_probs=20.0

Q ss_pred             cccCC--CCCCCCChHHHHHHHHhhcCCCCccccc
Q psy12165        426 VTCDL--CSKEWPSRKFMWQHLIRSHKAVAGLACG  458 (537)
Q Consensus       426 ~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~C~  458 (537)
                      |.|+.  |+++|.....|..|+ ++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~-r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhcccc-CeeCCCCCEeCC
Confidence            55655  666666666666665 556666666665

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=6.8e-08  Score=52.16  Aligned_cols=27  Identities=30%  Similarity=0.568  Sum_probs=17.6

Q ss_pred             Ccccccc--ccccCCChHHHHHHHHhccC
Q psy12165        385 HLVNCRV--CGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       385 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +||.|++  |+++|...+.|++|+++|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            4666666  66666666666666666665

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.42  E-value=1e-08  Score=62.63  Aligned_cols=38  Identities=16%  Similarity=0.481  Sum_probs=28.2

Q ss_pred             hHHHHhHhhh-cCCcccccc--ccccCCChHHHHHHHHhccC
Q psy12165        373 VKVSEHIKLH-GEHLVNCRV--CGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       373 ~~l~~H~~~H-~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ..|..|+. | +++||.|++  |+++|...++|..|+++|++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            34556664 5 778888876  88888888888888888877

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=3.9e-08  Score=51.90  Aligned_cols=26  Identities=23%  Similarity=0.520  Sum_probs=24.1

Q ss_pred             CCccccc--ccccccChhHHHHHHhhhh
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  512 (537)
                      +||.|++  |+++|++.++|+.|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899998  9999999999999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=7.5e-08  Score=52.12  Aligned_cols=27  Identities=30%  Similarity=0.637  Sum_probs=19.0

Q ss_pred             Ccccccc--ccccCCChHHHHHHHHhccC
Q psy12165        385 HLVNCRV--CGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       385 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  411 (537)
                      +||.|++  ||++|...+.|..|+++|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            4677766  77777777777777777765

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.3e-07  Score=46.97  Aligned_cols=29  Identities=24%  Similarity=0.424  Sum_probs=24.1

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ++||+|..|.++-.+.+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            36888888888888888888888888874

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=2.9e-07  Score=50.21  Aligned_cols=30  Identities=27%  Similarity=0.450  Sum_probs=24.3

Q ss_pred             CCcccccccccccccCHHHHHHHHHhcccc
Q psy12165        264 EEYKCLIPGCKKYFRTKLDCQKHCREHKTV  293 (537)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  293 (537)
                      +||.|++++|++.|...+.|..|+++|+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            478888888888888888888888888765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.20  E-value=4.5e-07  Score=49.68  Aligned_cols=28  Identities=21%  Similarity=0.502  Sum_probs=18.3

Q ss_pred             CCcccccc--ccccCCChHHHHHHHHhccC
Q psy12165        384 EHLVNCRV--CGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       384 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |+||.|++  |+++|....+|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            45666666  66666666666666666664

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=3e-07  Score=49.08  Aligned_cols=29  Identities=28%  Similarity=0.641  Sum_probs=25.5

Q ss_pred             CCcccccccccccccCHHHHHHHHHhccc
Q psy12165        264 EEYKCLIPGCKKYFRTKLDCQKHCREHKT  292 (537)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  292 (537)
                      +||.|.+++|++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            47899999999999999999999998864

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=7.8e-07  Score=43.01  Aligned_cols=26  Identities=38%  Similarity=0.759  Sum_probs=17.8

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |.+|++|++.|..+..|+.||+.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777776654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=4.3e-07  Score=47.82  Aligned_cols=26  Identities=27%  Similarity=0.538  Sum_probs=15.5

Q ss_pred             Ccccccc--ccccCCChHHHHHHHHhcc
Q psy12165        385 HLVNCRV--CGSIFHSEPELKVHLEEHT  410 (537)
Q Consensus       385 ~~~~C~~--C~~~f~~~~~L~~H~~~h~  410 (537)
                      +||.|+.  ||++|....+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3566655  6666666666666666553

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=7.9e-07  Score=44.66  Aligned_cols=27  Identities=22%  Similarity=0.566  Sum_probs=22.7

Q ss_pred             cCCcccccccccccChhHHHHHHhhhh
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      ++||.|++||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478888888888888888888888874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.02  E-value=1.5e-06  Score=43.59  Aligned_cols=27  Identities=33%  Similarity=0.591  Sum_probs=17.4

Q ss_pred             CCccccccccccCCChHHHHHHHHhcc
Q psy12165        384 EHLVNCRVCGSIFHSEPELKVHLEEHT  410 (537)
Q Consensus       384 ~~~~~C~~C~~~f~~~~~L~~H~~~h~  410 (537)
                      ++||.|++||+.|......++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            456666666666666666666666653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.3e-06  Score=43.00  Aligned_cols=27  Identities=22%  Similarity=0.475  Sum_probs=24.7

Q ss_pred             CCcccccccccccChhHHHHHHhhhhC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      +||+|..|+++-...+.|+.|+|+|.+
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs~   28 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHSD   28 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCcccccccchhcchhhHhhhhhcccC
Confidence            799999999999999999999999863

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.9e-06  Score=42.79  Aligned_cols=28  Identities=32%  Similarity=0.641  Sum_probs=22.2

Q ss_pred             CCccccccccccCCChHHHHHHHHhccC
Q psy12165        384 EHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       384 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ++||+|.+|++.....+.|..|++.|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4678888888888888888888888776

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=2.5e-06  Score=43.40  Aligned_cols=28  Identities=29%  Similarity=0.642  Sum_probs=21.0

Q ss_pred             CCccccccccccCCChHHHHHHHHhccC
Q psy12165        384 EHLVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       384 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      ++||.|++|+.+|..+..+..|+++|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4677777777777777777777777766

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.5e-06  Score=43.41  Aligned_cols=29  Identities=24%  Similarity=0.510  Sum_probs=24.4

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ++||.|++|...|.++..+.-|.|.|.|-
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            37888888888888888888888888873

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=3.6e-06  Score=42.96  Aligned_cols=27  Identities=19%  Similarity=0.426  Sum_probs=21.8

Q ss_pred             CCccccc--ccccccChhHHHHHHhhhhC
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g  513 (537)
                      +||.|.+  |+++++..+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4788877  88888888888888887765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=3.9e-06  Score=41.46  Aligned_cols=26  Identities=35%  Similarity=0.636  Sum_probs=23.4

Q ss_pred             cccccccccccChhHHHHHHhhhhCC
Q psy12165        489 PTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      ..|..||++|...+.|++|+.+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35899999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.75  E-value=8.3e-06  Score=38.89  Aligned_cols=24  Identities=29%  Similarity=0.541  Sum_probs=18.4

Q ss_pred             cccccccccccChhHHHHHHhhhh
Q psy12165        489 PTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      |+|..|.++|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            577778888888888888877774

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.5e-05  Score=39.86  Aligned_cols=27  Identities=26%  Similarity=0.522  Sum_probs=23.2

Q ss_pred             cccccccccccChhHHHHHHhhhhCCC
Q psy12165        489 PTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      |.|+.|+......+-|..|+|.|+|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            788889988888999999999988863

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=1.6e-05  Score=41.41  Aligned_cols=30  Identities=30%  Similarity=0.593  Sum_probs=17.0

Q ss_pred             CccccccccccccChhHHHHhHhhh-cCCcc
Q psy12165        358 KPYACRICARLLGNGVKVSEHIKLH-GEHLV  387 (537)
Q Consensus       358 ~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~  387 (537)
                      +...|.+||++|.+...|.+|...| +++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3445556666666555555555555 55554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.1e-05  Score=40.26  Aligned_cols=24  Identities=17%  Similarity=0.390  Sum_probs=19.6

Q ss_pred             CcccccccccccChhHHHHHHhhh
Q psy12165        488 NPTCEVCGRYHNARPKLESHLAVH  511 (537)
Q Consensus       488 ~~~C~~C~~~f~~~~~l~~H~~~h  511 (537)
                      ||.|..|..+|.++++|..||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            678888888888888888888753

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=3.2e-05  Score=38.80  Aligned_cols=27  Identities=15%  Similarity=0.372  Sum_probs=17.2

Q ss_pred             CCcccccccccccChhHHHHHHhhhhC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVG  513 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g  513 (537)
                      +||+|.+|.+.....++|+.|+++-++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            366666666666666666666665544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.59  E-value=2.6e-05  Score=37.84  Aligned_cols=26  Identities=23%  Similarity=0.415  Sum_probs=22.2

Q ss_pred             ccccccccccChhHHHHHHhhhhCCC
Q psy12165        490 TCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       490 ~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      +|+.|.+.|.++--|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888888874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=5.1e-05  Score=38.05  Aligned_cols=27  Identities=15%  Similarity=0.324  Sum_probs=13.9

Q ss_pred             CcccCCCCCCCCChHHHHHHHHhhcCC
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHLIRSHKA  451 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  451 (537)
                      ||+|.+|.+.....++|..|++..|..
T Consensus         2 py~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             Cccccccccccccchhhhhhhhccccc
Confidence            455555555555555555555444443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=3.8e-05  Score=39.16  Aligned_cols=28  Identities=29%  Similarity=0.706  Sum_probs=20.1

Q ss_pred             CCcccccccccccccCHHHHHHHHHhcc
Q psy12165        264 EEYKCLIPGCKKYFRTKLDCQKHCREHK  291 (537)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  291 (537)
                      +||.|.+++|++.+..+++|++|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4677777777777777777777777654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=4.1e-05  Score=37.60  Aligned_cols=26  Identities=23%  Similarity=0.483  Sum_probs=16.5

Q ss_pred             CccccccccccCCChHHHHHHHHhcc
Q psy12165        385 HLVNCRVCGSIFHSEPELKVHLEEHT  410 (537)
Q Consensus       385 ~~~~C~~C~~~f~~~~~L~~H~~~h~  410 (537)
                      +||+|..|++.-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            46666666666666666666666654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=4e-05  Score=38.14  Aligned_cols=29  Identities=31%  Similarity=0.492  Sum_probs=24.1

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      +..|.|..|...|.++-.|+.||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            35688888888888888888888888874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=4.1e-05  Score=38.34  Aligned_cols=28  Identities=18%  Similarity=0.292  Sum_probs=20.5

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      +||+|++|..-.++.++|..|++.-+|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4777778877777777888777766553

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=3.6e-05  Score=38.56  Aligned_cols=26  Identities=23%  Similarity=0.505  Sum_probs=15.3

Q ss_pred             CcccCCCCCCCCChHHHHHHHHhhcC
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHLIRSHK  450 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~~~~H~  450 (537)
                      ||+|+.|++.....++|..|++..|.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            56666666666666666666655553

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=5.3e-05  Score=39.44  Aligned_cols=24  Identities=33%  Similarity=0.724  Sum_probs=12.4

Q ss_pred             ccccccccCCChHHHHHHHHhccC
Q psy12165        388 NCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       388 ~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      .|+.||+.|.....|.+|...|.+
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~   30 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSG   30 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCS
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCC
Confidence            455555555555555555555554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=6.3e-05  Score=37.54  Aligned_cols=23  Identities=22%  Similarity=0.544  Sum_probs=16.2

Q ss_pred             ccccccccccCCChHHHHHHHHh
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEE  408 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~  408 (537)
                      ||.|..|+++|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56677777777777777777764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=8.7e-05  Score=36.58  Aligned_cols=24  Identities=38%  Similarity=0.621  Sum_probs=14.8

Q ss_pred             ccccccccCCChHHHHHHHHhccC
Q psy12165        388 NCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       388 ~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      .|..||++|...+.|++|..+|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            466666666666666666666654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00019  Score=35.79  Aligned_cols=25  Identities=36%  Similarity=0.589  Sum_probs=14.9

Q ss_pred             cccccccccCCChHHHHHHHHhccC
Q psy12165        387 VNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       387 ~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      |.|+.||......+.|+.|++.|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            4566666666666666666666655

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.18  E-value=0.0001  Score=36.61  Aligned_cols=26  Identities=23%  Similarity=0.418  Sum_probs=21.9

Q ss_pred             CCccccc--ccccccChhHHHHHHhhhh
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  512 (537)
                      .||+|++  |++.|...+.|++|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5788887  9999999999999988873

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.01  E-value=0.00025  Score=35.23  Aligned_cols=27  Identities=30%  Similarity=0.583  Sum_probs=22.9

Q ss_pred             CCcccccccccccccCHHHHHHHHHhc
Q psy12165        264 EEYKCLIPGCKKYFRTKLDCQKHCREH  290 (537)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~~~h  290 (537)
                      .||.|.-++|++.|+.++.|.+|...|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            478888888999999999998888765

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00027  Score=38.66  Aligned_cols=30  Identities=27%  Similarity=0.645  Sum_probs=27.0

Q ss_pred             CCCCcccccccccccccCHHHHHHHHHhcc
Q psy12165        262 DNEEYKCLIPGCKKYFRTKLDCQKHCREHK  291 (537)
Q Consensus       262 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  291 (537)
                      .++||.|..|+|+..|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            478999999999999999999999988775

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.96  E-value=0.00024  Score=35.45  Aligned_cols=28  Identities=21%  Similarity=0.371  Sum_probs=24.1

Q ss_pred             CCccccc--ccccccChhHHHHHHhhhhCC
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      +||.|..  |++.|++...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677766  999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.94  E-value=0.00031  Score=33.37  Aligned_cols=21  Identities=24%  Similarity=0.534  Sum_probs=8.6

Q ss_pred             ccccccccCCChHHHHHHHHh
Q psy12165        388 NCRVCGSIFHSEPELKVHLEE  408 (537)
Q Consensus       388 ~C~~C~~~f~~~~~L~~H~~~  408 (537)
                      +|..|..+|..++.|.+|.+.
T Consensus         2 kcglcersfveksalsrhqrv   22 (26)
T d1znfa_           2 KCGLCERSFVEKSALSRHQRV   22 (26)
T ss_dssp             BCSSSCCBCSSHHHHHHHGGG
T ss_pred             cccchHHHHHHHHHHHHHHHh
Confidence            344444444444444444433

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.89  E-value=0.00025  Score=39.22  Aligned_cols=30  Identities=27%  Similarity=0.409  Sum_probs=24.9

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      .+.|+|.+|++.|.+...|--||+.|...+
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            367899999999999999999998886553

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00014  Score=37.35  Aligned_cols=28  Identities=39%  Similarity=0.678  Sum_probs=22.7

Q ss_pred             CCcccccccccccccCHHHHHHHH-Hhcc
Q psy12165        264 EEYKCLIPGCKKYFRTKLDCQKHC-REHK  291 (537)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~  291 (537)
                      +||.|.+++|.+.|+..++-.+|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            478888888999998888888886 6664

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.81  E-value=0.00037  Score=35.76  Aligned_cols=27  Identities=26%  Similarity=0.568  Sum_probs=14.0

Q ss_pred             cccccccccccCCHHHHHHHHHhhCCC
Q psy12165        454 GLACGVCLKISETYEALALHLDQAHPG  480 (537)
Q Consensus       454 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  480 (537)
                      ||.|.+|+..|+.+.-|.+|....|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            345555555555555555555555543

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.81  E-value=0.0004  Score=32.99  Aligned_cols=22  Identities=32%  Similarity=0.747  Sum_probs=10.8

Q ss_pred             CcccCCCCCCCCChHHHHHHHH
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHLI  446 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~~  446 (537)
                      ||+|..|+..|-.+.+|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            3445555555545555555543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.80  E-value=0.00035  Score=35.87  Aligned_cols=27  Identities=26%  Similarity=0.752  Sum_probs=17.8

Q ss_pred             CcccCCCCCCCCChHHHHHHHHhhcCC
Q psy12165        425 PVTCDLCSKEWPSRKFMWQHLIRSHKA  451 (537)
Q Consensus       425 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  451 (537)
                      ||.|.+|++.|+.+.-|.+|..+.|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            466666666666666666666666654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.72  E-value=0.00067  Score=33.67  Aligned_cols=26  Identities=35%  Similarity=0.774  Sum_probs=12.5

Q ss_pred             ccccccccccCCChHHHHHHHHhccC
Q psy12165        386 LVNCRVCGSIFHSEPELKVHLEEHTD  411 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~~~h~~  411 (537)
                      .|.|..|...|..+..|+.||-.|++
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            34444444444444444444444443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.64  E-value=0.00068  Score=37.46  Aligned_cols=29  Identities=24%  Similarity=0.525  Sum_probs=17.7

Q ss_pred             CCCcccCCCCCCCCChHHHHHHHHhhcCCC
Q psy12165        423 ELPVTCDLCSKEWPSRKFMWQHLIRSHKAV  452 (537)
Q Consensus       423 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  452 (537)
                      .+.|.|.+|++.|.+-++|--|+ ..|..+
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~-~~Hr~~   31 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHM-NVHRRD   31 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHH-HTTCCS
T ss_pred             CCccCCCCCCCccCCcccccchH-hhhcch
Confidence            34566666666666666666665 555443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.59  E-value=0.00057  Score=33.06  Aligned_cols=26  Identities=31%  Similarity=0.709  Sum_probs=24.0

Q ss_pred             ecccchhhccChHHHHHHHhhcCCCC
Q psy12165        169 ICHLCQKQFKQNWLLQKHKKTCKGPK  194 (537)
Q Consensus       169 ~C~~C~~~f~~~~~l~~H~~~h~~~~  194 (537)
                      +|+.|.++|.++.-|+.|-+.|.|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999998864

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00083  Score=37.11  Aligned_cols=25  Identities=20%  Similarity=0.497  Sum_probs=20.3

Q ss_pred             cCCccccccccccCCChHHHHHHHH
Q psy12165        383 GEHLVNCRVCGSIFHSEPELKVHLE  407 (537)
Q Consensus       383 ~~~~~~C~~C~~~f~~~~~L~~H~~  407 (537)
                      |-+||.|.+|++.|.+...+.+|.-
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4578888888888888888888864

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.41  E-value=0.0012  Score=31.27  Aligned_cols=22  Identities=18%  Similarity=0.283  Sum_probs=11.0

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy12165        454 GLACGVCLKISETYEALALHLD  475 (537)
Q Consensus       454 ~~~C~~C~~~f~~~~~l~~H~~  475 (537)
                      ||+|.-|...|-.+.+|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4455555555555555555544

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00042  Score=35.57  Aligned_cols=27  Identities=19%  Similarity=0.363  Sum_probs=20.5

Q ss_pred             CCccccc--ccccccChhHHHHHH-hhhhC
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHL-AVHVG  513 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~g  513 (537)
                      +||.|++  |.++|++.++-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4778877  888888888888886 67654

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0011  Score=32.53  Aligned_cols=25  Identities=20%  Similarity=0.458  Sum_probs=18.3

Q ss_pred             CcccccccccccChhHHHHHHhhhh
Q psy12165        488 NPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       488 ~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      |-+|+.|.++.+++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3467777777777777777777774

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.13  E-value=0.0017  Score=31.66  Aligned_cols=22  Identities=27%  Similarity=0.439  Sum_probs=19.6

Q ss_pred             CcccccccccccChhHHHHHHh
Q psy12165        488 NPTCEVCGRYHNARPKLESHLA  509 (537)
Q Consensus       488 ~~~C~~C~~~f~~~~~l~~H~~  509 (537)
                      ||+|..||+.+.++.+|.+|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999999964

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.00042  Score=42.93  Aligned_cols=46  Identities=26%  Similarity=0.367  Sum_probs=35.5

Q ss_pred             cCCcccccccccccChhHHHHHHhhhhCCCcCCccccccchhhHHHHhhhcC
Q psy12165        486 VDNPTCEVCGRYHNARPKLESHLAVHVGLDKSQTLLHKCIWTRHIRATLLRK  537 (537)
Q Consensus       486 ~~~~~C~~C~~~f~~~~~l~~H~~~h~g~~~~~~~~~~~~~~~~~~~~~~~~  537 (537)
                      ...|+|.+|+-.|-+...|..|+..|..+      .++-..+...|.+||+|
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hnee------fqkra~rqerrkqllsk   61 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNEE------FQKRAKRQERRKQLLSK   61 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHH------HHHHCCCCSCCCCCCCC
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccHH------HHHHHHHHHHHHHHHHH
Confidence            36799999999999999999999999865      33444455566666665

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.91  E-value=0.0019  Score=30.79  Aligned_cols=22  Identities=14%  Similarity=0.475  Sum_probs=17.9

Q ss_pred             cccccccccccChhHHHHHHhh
Q psy12165        489 PTCEVCGRYHNARPKLESHLAV  510 (537)
Q Consensus       489 ~~C~~C~~~f~~~~~l~~H~~~  510 (537)
                      |.|++|-+.|+++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888764

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0024  Score=31.36  Aligned_cols=24  Identities=17%  Similarity=0.263  Sum_probs=22.3

Q ss_pred             ccccccccccccchHHHHHhHHhh
Q psy12165         10 ALSCGNCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus        10 ~~~C~~C~~~f~~~~~L~~H~~~~   33 (537)
                      |-+|+.|+++.+++++|+-|.+.|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            568999999999999999999887

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.85  E-value=0.0032  Score=29.95  Aligned_cols=24  Identities=21%  Similarity=0.491  Sum_probs=16.3

Q ss_pred             ccccccccccCCHHHHHHHHHhhC
Q psy12165        455 LACGVCLKISETYEALALHLDQAH  478 (537)
Q Consensus       455 ~~C~~C~~~f~~~~~l~~H~~~~H  478 (537)
                      |.|++|-+.|+.+.++..|++..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            567777777777777777766554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.82  E-value=0.0019  Score=32.12  Aligned_cols=29  Identities=24%  Similarity=0.513  Sum_probs=25.2

Q ss_pred             CCcccccccccccccCHHHHHHHHHhccc
Q psy12165        264 EEYKCLIPGCKKYFRTKLDCQKHCREHKT  292 (537)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  292 (537)
                      +||.|..++|++.|.+.--|.+|...|.+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            47889889999999999999999888875

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.70  E-value=0.0031  Score=30.85  Aligned_cols=24  Identities=21%  Similarity=0.408  Sum_probs=14.8

Q ss_pred             cccCCCCCCCCChHHHHHHHHhhc
Q psy12165        426 VTCDLCSKEWPSRKFMWQHLIRSH  449 (537)
Q Consensus       426 ~~C~~C~~~f~~~~~l~~H~~~~H  449 (537)
                      |+|+.|+.....+++|+.|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            566666666666666666665554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0035  Score=34.57  Aligned_cols=27  Identities=26%  Similarity=0.350  Sum_probs=24.0

Q ss_pred             ccccccccccccccccchHHHHHhHHh
Q psy12165          6 KEEAALSCGNCLKVFRDNLSLLKHVEE   32 (537)
Q Consensus         6 ~~~~~~~C~~C~~~f~~~~~L~~H~~~   32 (537)
                      ++-+||.|.+|++.|-.+.++.+|.-.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            456899999999999999999999754

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0044  Score=33.78  Aligned_cols=26  Identities=35%  Similarity=0.703  Sum_probs=12.3

Q ss_pred             CCcccccc--ccccCCChHHHHHHHHhc
Q psy12165        384 EHLVNCRV--CGSIFHSEPELKVHLEEH  409 (537)
Q Consensus       384 ~~~~~C~~--C~~~f~~~~~L~~H~~~h  409 (537)
                      ++||.|..  |+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            34444422  555555555555554444

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0054  Score=29.96  Aligned_cols=26  Identities=23%  Similarity=0.491  Sum_probs=19.9

Q ss_pred             cccccccccccCCHHHHHHHHHhhCC
Q psy12165        454 GLACGVCLKISETYEALALHLDQAHP  479 (537)
Q Consensus       454 ~~~C~~C~~~f~~~~~l~~H~~~~H~  479 (537)
                      .|.|+.|+-.-..+.+|+.|++..|+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            36788888888888888888877663

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.36  E-value=0.0058  Score=29.73  Aligned_cols=21  Identities=24%  Similarity=0.545  Sum_probs=10.3

Q ss_pred             ccccccccccCCChHHHHHHH
Q psy12165        386 LVNCRVCGSIFHSEPELKVHL  406 (537)
Q Consensus       386 ~~~C~~C~~~f~~~~~L~~H~  406 (537)
                      ||+|..||+.+..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            344555555555555554443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.0088  Score=34.26  Aligned_cols=26  Identities=27%  Similarity=0.514  Sum_probs=23.9

Q ss_pred             CCcccccccccccChhHHHHHHhhhh
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      ..|.|..|++.|+....|++|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            57999999999999999999999886

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.90  E-value=0.009  Score=30.25  Aligned_cols=30  Identities=20%  Similarity=0.461  Sum_probs=26.0

Q ss_pred             CCcccccccccccccCHHHHHHHHHhcccc
Q psy12165        264 EEYKCLIPGCKKYFRTKLDCQKHCREHKTV  293 (537)
Q Consensus       264 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  293 (537)
                      +.|.|++++|+-.|+..-.|..|+-.|+++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            458899999999999999999999888763

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.011  Score=31.48  Aligned_cols=24  Identities=29%  Similarity=0.294  Sum_probs=19.2

Q ss_pred             cccccccccChhHHHHHHhhhhCC
Q psy12165        491 CEVCGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       491 C~~C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      |+.=++.|..+-.|..|||+|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333456799999999999999985

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.47  E-value=0.014  Score=29.54  Aligned_cols=28  Identities=36%  Similarity=0.595  Sum_probs=24.6

Q ss_pred             CCccccc--ccccccChhHHHHHHhhhhCC
Q psy12165        487 DNPTCEV--CGRYHNARPKLESHLAVHVGL  514 (537)
Q Consensus       487 ~~~~C~~--C~~~f~~~~~l~~H~~~h~g~  514 (537)
                      +.|.|++  |+..|.....|.-|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4678877  999999999999999999985

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.34  E-value=0.013  Score=28.40  Aligned_cols=26  Identities=27%  Similarity=0.530  Sum_probs=22.8

Q ss_pred             cccccccccccccCHHHHHHHHHhcc
Q psy12165        266 YKCLIPGCKKYFRTKLDCQKHCREHK  291 (537)
Q Consensus       266 ~~C~~~~C~~~f~~~~~l~~H~~~h~  291 (537)
                      |.|-+++|++.|.....|..|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            67888999999999999999987764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.16  E-value=0.016  Score=33.21  Aligned_cols=28  Identities=39%  Similarity=0.627  Sum_probs=24.9

Q ss_pred             cccccccccccccccchHHHHHhHHhhC
Q psy12165          7 EEAALSCGNCLKVFRDNLSLLKHVEEEH   34 (537)
Q Consensus         7 ~~~~~~C~~C~~~f~~~~~L~~H~~~~h   34 (537)
                      +...|.|-.|++.|++...|+.|..+|-
T Consensus         3 E~~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           3 EAGILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ccceeeccccccccCCHHHHhHhHHhcC
Confidence            4467899999999999999999999874

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.90  E-value=0.015  Score=30.40  Aligned_cols=29  Identities=24%  Similarity=0.471  Sum_probs=23.3

Q ss_pred             CCcccccccccccChhHHHHHHhhhhCCC
Q psy12165        487 DNPTCEVCGRYHNARPKLESHLAVHVGLD  515 (537)
Q Consensus       487 ~~~~C~~C~~~f~~~~~l~~H~~~h~g~~  515 (537)
                      ..|.|..|++.|+++..+.+|-...+|.+
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g~d   31 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAGPD   31 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCCCC
Confidence            35788888888888888888888777754

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.70  E-value=0.043  Score=28.62  Aligned_cols=27  Identities=22%  Similarity=0.495  Sum_probs=18.1

Q ss_pred             CccccccCCcccChHHHHHHHHhcCCC
Q psy12165        125 DVTCRICSKVSSSRGHLEKHLIAHDNP  151 (537)
Q Consensus       125 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  151 (537)
                      .|.|..|++.|..+..+.+|.....++
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            366777777777777777776665543

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.44  E-value=0.022  Score=29.44  Aligned_cols=23  Identities=26%  Similarity=0.353  Sum_probs=20.8

Q ss_pred             ccccccccccccccchHHHHHhH
Q psy12165          8 EAALSCGNCLKVFRDNLSLLKHV   30 (537)
Q Consensus         8 ~~~~~C~~C~~~f~~~~~L~~H~   30 (537)
                      ...|.|.-|+..|++.+.|..|.
T Consensus         6 parf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHT
T ss_pred             ccceeccccceeecChhHHHhhh
Confidence            45799999999999999999995

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.37  E-value=0.034  Score=27.45  Aligned_cols=25  Identities=24%  Similarity=0.599  Sum_probs=20.8

Q ss_pred             ccccccccccccCHHHHHHHHHhcc
Q psy12165        267 KCLIPGCKKYFRTKLDCQKHCREHK  291 (537)
Q Consensus       267 ~C~~~~C~~~f~~~~~l~~H~~~h~  291 (537)
                      .|++++|++.|++..-|..|....+
T Consensus         2 ~cdf~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHGG
T ss_pred             CCCCCCchhhhccHHHHHhHHHHHH
Confidence            4788999999999999998876543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.29  E-value=0.025  Score=27.80  Aligned_cols=19  Identities=42%  Similarity=0.823  Sum_probs=17.4

Q ss_pred             cccccccchHHHHHhHHhh
Q psy12165         15 NCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus        15 ~C~~~f~~~~~L~~H~~~~   33 (537)
                      -|++.|.+.++++.|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3999999999999999876

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.90  E-value=0.038  Score=29.40  Aligned_cols=29  Identities=28%  Similarity=0.561  Sum_probs=20.4

Q ss_pred             Cccccccccccc---ccCHHHHHHHHHhcccc
Q psy12165        265 EYKCLIPGCKKY---FRTKLDCQKHCREHKTV  293 (537)
Q Consensus       265 ~~~C~~~~C~~~---f~~~~~l~~H~~~h~~~  293 (537)
                      .|.|.+.+|.+.   |.....|..|++.|+++
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            466776677644   77778888888887653

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.068  Score=26.45  Aligned_cols=26  Identities=27%  Similarity=0.461  Sum_probs=18.6

Q ss_pred             ccccCCCcCcCCChHHHHHHHHhhcC
Q psy12165         96 MYVCDLCPKYYSRSTHLWKHVNRVHK  121 (537)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~~H~  121 (537)
                      .|.|..|++...+...++.|+...|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            46777777777777777777765554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.09  E-value=0.046  Score=28.18  Aligned_cols=22  Identities=27%  Similarity=0.466  Sum_probs=19.7

Q ss_pred             CccccCCCcCcCCChHHHHHHH
Q psy12165         95 AMYVCDLCPKYYSRSTHLWKHV  116 (537)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~  116 (537)
                      ..|.|+-||-.|++.+.|..|.
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            3689999999999999999996

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.38  E-value=0.14  Score=25.33  Aligned_cols=25  Identities=20%  Similarity=0.408  Sum_probs=15.9

Q ss_pred             CcccccccccccChhHHHHHHhhhh
Q psy12165        488 NPTCEVCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       488 ~~~C~~C~~~f~~~~~l~~H~~~h~  512 (537)
                      .|.|..|++...+...++-|+...+
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            3667777777777777777744333

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.85  E-value=0.13  Score=25.42  Aligned_cols=25  Identities=32%  Similarity=0.635  Sum_probs=16.2

Q ss_pred             cccCC--CCCCCCChHHHHHHHHhhcC
Q psy12165        426 VTCDL--CSKEWPSRKFMWQHLIRSHK  450 (537)
Q Consensus       426 ~~C~~--C~~~f~~~~~l~~H~~~~H~  450 (537)
                      |.|+.  |+.+|.++.++.+|..+.|.
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhcc
Confidence            55544  77777777777777655553

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.71  E-value=0.1  Score=25.17  Aligned_cols=19  Identities=26%  Similarity=0.551  Sum_probs=15.0

Q ss_pred             ccccccChhHHHHHHhhhh
Q psy12165        494 CGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       494 C~~~f~~~~~l~~H~~~h~  512 (537)
                      |+++|.....|+.|+-+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            8888888888888877775

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.71  E-value=0.059  Score=34.53  Aligned_cols=27  Identities=22%  Similarity=0.421  Sum_probs=24.0

Q ss_pred             cccccccccccccccchHHHHHhHHhh
Q psy12165          7 EEAALSCGNCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus         7 ~~~~~~C~~C~~~f~~~~~L~~H~~~~   33 (537)
                      +...|.|..|++.|.+...|..|+++.
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ksK   38 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRSK   38 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCEEecccccCccCCHHHHHHHHccc
Confidence            456799999999999999999999864

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.57  E-value=0.15  Score=25.00  Aligned_cols=24  Identities=38%  Similarity=0.724  Sum_probs=18.7

Q ss_pred             ccccccccccccCHHHHHHHHHhc
Q psy12165        267 KCLIPGCKKYFRTKLDCQKHCREH  290 (537)
Q Consensus       267 ~C~~~~C~~~f~~~~~l~~H~~~h  290 (537)
                      .|+-.+|++.|...+.+++|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            355567888888888888888776

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.30  E-value=0.095  Score=33.52  Aligned_cols=26  Identities=27%  Similarity=0.577  Sum_probs=23.4

Q ss_pred             CCceeecccchhhccChHHHHHHHhh
Q psy12165        164 GESVHICHLCQKQFKQNWLLQKHKKT  189 (537)
Q Consensus       164 ~~~~~~C~~C~~~f~~~~~l~~H~~~  189 (537)
                      |...|-|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            56679999999999999999999864

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.14  E-value=0.085  Score=29.17  Aligned_cols=14  Identities=43%  Similarity=0.729  Sum_probs=7.6

Q ss_pred             CCcccccccccccc
Q psy12165        357 KKPYACRICARLLG  370 (537)
Q Consensus       357 ~~~~~C~~C~~~f~  370 (537)
                      ++.|.|++||..+.
T Consensus         3 ~~~~~C~vCG~i~~   16 (37)
T d1nnqa2           3 KKVYICPICGYTAV   16 (37)
T ss_dssp             SCEEECTTTCCEEE
T ss_pred             CcEEECCCCCCEec
Confidence            34556666665543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.83  E-value=0.09  Score=32.98  Aligned_cols=41  Identities=22%  Similarity=0.391  Sum_probs=29.4

Q ss_pred             cCCCceeecccchhhccChHHHHHHHhhcCCCCCCCCCCCCCCCCCccccccchhcc
Q psy12165        162 EFGESVHICHLCQKQFKQNWLLQKHKKTCKGPKRPTSPLPEPDEDGIFRCKKCVKVF  218 (537)
Q Consensus       162 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~C~~C~~~f  218 (537)
                      ......|+|+.|+++|.....+.. +..-               .+.|.|..|+-..
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~~L-~d~~---------------~~~F~C~~C~~el   49 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEANQL-FDPM---------------TGTFRCTFCHTEV   49 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHHH-EETT---------------TTEEBCSSSCCBC
T ss_pred             cccCCceECCCCCCCcchhhHHHh-cCcC---------------CCeEEecCCCCEE
Confidence            346778999999999988776654 2221               2269999998653

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.54  E-value=0.2  Score=24.74  Aligned_cols=24  Identities=17%  Similarity=0.414  Sum_probs=15.0

Q ss_pred             cccc--cccccccChhHHHHHHhhhh
Q psy12165        489 PTCE--VCGRYHNARPKLESHLAVHV  512 (537)
Q Consensus       489 ~~C~--~C~~~f~~~~~l~~H~~~h~  512 (537)
                      |+|+  .|+..|+++.+++.|...-+
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            4453  37777777777777765433

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.55  E-value=0.23  Score=25.89  Aligned_cols=28  Identities=25%  Similarity=0.666  Sum_probs=21.3

Q ss_pred             CccccCCCcCcCCChHHHHHHHHhhcCC
Q psy12165         95 AMYVCDLCPKYYSRSTHLWKHVNRVHKG  122 (537)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~  122 (537)
                      ..|+|.+|.+++...+++-+|+...|..
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             cEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            3678888888888888888887766653

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.99  E-value=0.083  Score=33.13  Aligned_cols=37  Identities=14%  Similarity=0.341  Sum_probs=27.6

Q ss_pred             CccccCCCcCcCCChHHHHHHHHhhcCCCCCccccccCCcc
Q psy12165         95 AMYVCDLCPKYYSRSTHLWKHVNRVHKGHPDVTCRICSKVS  135 (537)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~f  135 (537)
                      ..|+||.|+++|+....++    ..-.....|.|..|+-..
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~----L~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBC
T ss_pred             CceECCCCCCCcchhhHHH----hcCcCCCeEEecCCCCEE
Confidence            4799999999998776553    234455679999997654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.04  E-value=0.26  Score=25.72  Aligned_cols=26  Identities=19%  Similarity=0.436  Sum_probs=16.4

Q ss_pred             CcccccccccccCCHHHHHHHHHhhC
Q psy12165        453 AGLACGVCLKISETYEALALHLDQAH  478 (537)
Q Consensus       453 ~~~~C~~C~~~f~~~~~l~~H~~~~H  478 (537)
                      ..|+|.+|.+.++...++-+|....|
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            34666666666666666666666555

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.76  E-value=0.6  Score=26.40  Aligned_cols=32  Identities=22%  Similarity=0.323  Sum_probs=27.5

Q ss_pred             CCCceeecccchhhccChHHHHHHHhhcCCCC
Q psy12165        163 FGESVHICHLCQKQFKQNWLLQKHKKTCKGPK  194 (537)
Q Consensus       163 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  194 (537)
                      ..+.|-.|++|+.......+|++|+..-|-.+
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            46889999999999999999999998765443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.38  E-value=0.34  Score=29.72  Aligned_cols=28  Identities=14%  Similarity=0.389  Sum_probs=25.3

Q ss_pred             ccccccccccccccccchHHHHHhHHhh
Q psy12165          6 KEEAALSCGNCLKVFRDNLSLLKHVEEE   33 (537)
Q Consensus         6 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~   33 (537)
                      .....|.|..|+..|.+...|..|+..|
T Consensus        14 ~~s~~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1          14 LQNSTYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             CCCSCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             cCCceeeechhHHHHhhHHHHHHHHHhc
Confidence            3557899999999999999999999887

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.18  E-value=0.48  Score=26.78  Aligned_cols=29  Identities=28%  Similarity=0.469  Sum_probs=18.5

Q ss_pred             CCCCcccCCCCCCCCChHHHHHHHHhhcC
Q psy12165        422 PELPVTCDLCSKEWPSRKFMWQHLIRSHK  450 (537)
Q Consensus       422 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  450 (537)
                      ++.|-.|++|+.......+|+.|+...|-
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            35566677777666666667776655553

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=83.71  E-value=0.24  Score=27.02  Aligned_cols=12  Identities=33%  Similarity=0.603  Sum_probs=5.6

Q ss_pred             Cccccccccccc
Q psy12165        358 KPYACRICARLL  369 (537)
Q Consensus       358 ~~~~C~~C~~~f  369 (537)
                      +.|.|++||.+.
T Consensus         4 ~~~vC~vCGyi~   15 (36)
T d1yuza2           4 KFHLCPICGYIH   15 (36)
T ss_dssp             CEEECSSSCCEE
T ss_pred             CEEECCCCCCEe
Confidence            344555554443

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.88  E-value=0.38  Score=25.32  Aligned_cols=27  Identities=22%  Similarity=0.482  Sum_probs=16.9

Q ss_pred             CcccccchhcccCcHHHHHHHhhcCCC
Q psy12165        299 TNYCNFCADLFTNRKKLWLHLKSTHKD  325 (537)
Q Consensus       299 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  325 (537)
                      ...|-.|-++|.+..++.+|+...|..
T Consensus         3 kltclecmrtfkssfsiwrhqvevhnq   29 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHNQ   29 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheeccc
Confidence            345666666666666666666655554

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.56  E-value=1.1  Score=25.93  Aligned_cols=29  Identities=21%  Similarity=0.351  Sum_probs=17.2

Q ss_pred             CCCcccCC--CCCCCCChHHHHHHHHhhcCC
Q psy12165        423 ELPVTCDL--CSKEWPSRKFMWQHLIRSHKA  451 (537)
Q Consensus       423 ~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~  451 (537)
                      -+||.|-.  |...|+-..+|..|.+.+|..
T Consensus        18 yrpyrcvhqgc~aaftiq~nlilhy~avh~s   48 (61)
T d1x3ca1          18 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKS   48 (61)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS
T ss_pred             CCceeeeccchhhhhhhhhhHHHHHHHHhhh
Confidence            45566655  666666666666666655544