Psyllid ID: psy12166

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSARIN
Secondary Structure (PSIPRED)
cccccEEEHHHHcccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccHHHHcccccccccEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccEcccEccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccEcccccccccccHHHHHHHHHccccccEEEccccc
Coil and Loop (DISEMBL)
MDCGWKKTAYEiglgipaeplfrfdrtkphscdlcgktYTLAKHLWGhvksahqghpsvtcnvcgrTFSSIANLAehkrsrhgiTGFVVSARIN
Flexible Loop (DISEMBL)
mdcgwkktayeiglgipaeplfrfdRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANlaehkrsrhgitgfvvsarin
Low Complexity Region (SEG)
MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSARIN
Disordered region (IsUnstruct)
**CGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV*****
Disordered Region (DISOPRED)
MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA***
Disordered Region (DISEMBL)
MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSARIN
Disordered Region (DISPRO)
**C*WKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSARIN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	94	2.2.26 [Sep-21-2011]
Q15776	578	Zinc finger protein 192 O	yes	N/A	0.585	0.095	0.482	3e-08
A2T736	578	Zinc finger protein 192 O	yes	N/A	0.585	0.095	0.482	3e-08
A1YG60	578	Zinc finger protein 192 O	N/A	N/A	0.585	0.095	0.482	3e-08
P49910	485	Zinc finger protein 165 O	no	N/A	0.563	0.109	0.425	6e-07
Q5SXM1	525	Zinc finger protein 678 O	no	N/A	0.542	0.097	0.461	1e-06
Q9HBT8	521	Zinc finger protein 286A	no	N/A	0.542	0.097	0.442	3e-06
Q9UC06	446	Zinc finger protein 70 OS	no	N/A	0.585	0.123	0.428	4e-06
Q86XU0	584	Zinc finger protein 677 O	no	N/A	0.670	0.107	0.343	5e-06
Q96MU6	729	Zinc finger protein 778 O	no	N/A	0.659	0.085	0.349	5e-06
Q8BIF9	381	Zinc finger protein 787 O	no	N/A	0.638	0.157	0.393	5e-06

>sp|Q15776|ZN192_HUMAN Zinc finger protein 192 OS=Homo sapiens GN=ZNF192 PE=1 SV=2

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           KP+ CD CGKT+  + HL GH +S H G     CN CGR FS  + L EH+R   G
Sbjct: 460 KPYECDECGKTFRRSSHLIGHQRS-HTGEKPYKCNECGRAFSQKSGLIEHQRIHTG 514

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|A2T736|ZN192_PANTR Zinc finger protein 192 OS=Pan troglodytes GN=ZNF192 PE=3 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           KP+ CD CGKT+  + HL GH +S H G     CN CGR FS  + L EH+R   G
Sbjct: 460 KPYECDECGKTFRRSSHLIGHQRS-HTGEKPYKCNECGRAFSQKSGLIEHQRIHTG 514

May be involved in transcriptional regulation.

Pan troglodytes (taxid: 9598)

>sp|A1YG60|ZN192_PANPA Zinc finger protein 192 OS=Pan paniscus GN=ZNF192 PE=3 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           KP+ CD CGKT+  + HL GH +S H G     CN CGR FS  + L EH+R   G
Sbjct: 460 KPYECDECGKTFRRSSHLIGHQRS-HTGEKPYKCNECGRAFSQKSGLIEHQRIHTG 514

May be involved in transcriptional regulation.

Pan paniscus (taxid: 9597)

>sp|P49910|ZN165_HUMAN Zinc finger protein 165 OS=Homo sapiens GN=ZNF165 PE=1 SV=1

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)

Query: 26  RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
           R KP+ C  CGKT+ ++ HL  H +  H G     C+ CGR FS  +NL++H+R
Sbjct: 424 REKPYECSECGKTFRVSSHLIRHFR-IHTGEKPYECSECGRAFSQSSNLSQHQR 476

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5SXM1|ZN678_HUMAN Zinc finger protein 678 OS=Homo sapiens GN=ZNF678 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
           KP+ C+ CGKT+    HL  H K  H G     C  CGRTF+  +NL +HKR
Sbjct: 319 KPYQCEECGKTFNRCSHLSSH-KRIHTGEKPYKCEECGRTFTQFSNLTQHKR 369

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9HBT8|Z286A_HUMAN Zinc finger protein 286A OS=Homo sapiens GN=ZNF286A PE=2 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
           KP+ C  CGKT++ + HL  H +  H G     CN CG+TFS  +N A+H+R
Sbjct: 408 KPYECSECGKTFSQSTHLVQHQR-IHTGEKPYECNECGKTFSRSSNFAKHQR 458

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UC06|ZNF70_HUMAN Zinc finger protein 70 OS=Homo sapiens GN=ZNF70 PE=2 SV=2

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           KPH CDLCGK +    HL  H +  H G     C+ CG+ FS  +NL EH+++  G
Sbjct: 278 KPHECDLCGKAFCHRSHLIRHQR-IHTGKKPYKCDECGKAFSQSSNLIEHRKTHTG 332

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q86XU0|ZN677_HUMAN Zinc finger protein 677 OS=Homo sapiens GN=ZNF677 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGF 87
           KP+ C+ CGK +    HLWGH +  H G     CN C + F+  ++L +HKR   G   +
Sbjct: 345 KPYKCNECGKAFIQRSHLWGHER-IHTGEKPYKCNECDKAFAERSSLTQHKRIHTGEKPY 403

Query: 88  VVSA 91
           + + 
Sbjct: 404 ICNE 407

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q96MU6|ZN778_HUMAN Zinc finger protein 778 OS=Homo sapiens GN=ZNF778 PE=2 SV=3

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGF 87
           KP+ C +CGK +T + HL  H+++ H G     C  CG+ F+S ++L EH+R+  G   +
Sbjct: 587 KPYECKVCGKAFTTSSHLIVHIRT-HTGEKPYICKECGKAFASSSHLIEHRRTHTGEKPY 645

Query: 88  VVS 90
           + +
Sbjct: 646 ICN 648

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BIF9|ZN787_MOUSE Zinc finger protein 787 OS=Mus musculus GN=Znf787 PE=2 SV=3

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGF 87
           KP++C  CGK ++ + +L  H +  H G    TC  CGR+F+   +LA+H+RS  G+  F
Sbjct: 120 KPYACSECGKRFSWSSNLMQHQR-IHTGEKPYTCPDCGRSFTQSKSLAKHRRSHSGLKPF 178

Query: 88  V 88
           V
Sbjct: 179 V 179

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
345479552	2163	PREDICTED: hypothetical protein LOC10067	0.563	0.024	0.553	3e-14
307204038	2358	Zinc finger protein Xfin [Harpegnathos s	0.585	0.023	0.553	6e-14
328793464	2082	PREDICTED: hypothetical protein LOC72691	0.563	0.025	0.553	7e-14
307180446	2218	Zinc finger protein 91 [Camponotus flori	0.563	0.023	0.553	9e-14
332023786	2181	Zinc finger protein Xfin [Acromyrmex ech	0.563	0.024	0.553	1e-13
350409409	1953	PREDICTED: hypothetical protein LOC10074	0.765	0.036	0.473	1e-12
340713787	1457	PREDICTED: zinc finger protein Xfin-like	0.765	0.049	0.473	2e-12
322792476	1669	hypothetical protein SINV_80660 [Solenop	0.563	0.031	0.553	4e-12
270008760	1122	hypothetical protein TcasGA2_TC015347 [T	0.648	0.054	0.453	1e-07
281339216	460	hypothetical protein PANDA_017418 [Ailur	0.542	0.110	0.480	2e-07

>gi|345479552|ref|XP_003423975.1| PREDICTED: hypothetical protein LOC100678349 [Nasonia vitripennis]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 41/56 (73%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           +P+ CDLC K+Y+ AKH WGHV + H+GHP+VTC  C R +S+  NL EH +SRH 
Sbjct: 266 RPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHA 321

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204038|gb|EFN82942.1| Zinc finger protein Xfin [Harpegnathos saltator]

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 42/56 (75%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           +P+ CDLC K+Y+ AKH WGHV ++H+GHP+VTC  C R +S+  NL EH +SRH 
Sbjct: 228 RPYQCDLCHKSYSTAKHRWGHVSTSHRGHPAVTCGYCSRIYSTRINLEEHVKSRHA 283

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328793464|ref|XP_001122633.2| PREDICTED: hypothetical protein LOC726916 [Apis mellifera]

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 41/56 (73%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           +P+ CDLC K+Y+ AKH WGHV + H+GHP+VTC  C R +S+  NL EH +SRH 
Sbjct: 367 RPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHA 422

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180446|gb|EFN68472.1| Zinc finger protein 91 [Camponotus floridanus]

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 41/56 (73%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           +P+ CDLC K+Y+ AKH WGHV + H+GHP+VTC  C R +S+  NL EH +SRH 
Sbjct: 275 RPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRCNLDEHIKSRHA 330

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332023786|gb|EGI64010.1| Zinc finger protein Xfin [Acromyrmex echinatior]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 41/56 (73%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           +P+ CDLC K+Y+ AKH WGHV + H+GHP+VTC  C R +S+  NL EH +SRH 
Sbjct: 272 RPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRYNLDEHIKSRHA 327

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409409|ref|XP_003488726.1| PREDICTED: hypothetical protein LOC100747641 [Bombus impatiens]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 12  IGLG-IPAEPLFRFDRT---KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRT 67
           +G G +  E +   D T   +P+ CDLC K+Y+ AKH WGHV + H+GHP+VTC  C R 
Sbjct: 240 VGAGDVIGEKVLTDDHTSYKRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRI 299

Query: 68  FSSIANLAEHKRSRHG 83
           +S+  NL EH +SRH 
Sbjct: 300 YSTRTNLEEHIKSRHA 315

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340713787|ref|XP_003395417.1| PREDICTED: zinc finger protein Xfin-like [Bombus terrestris]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 4/76 (5%)

Query: 12  IGLG-IPAEPLFRFDRT---KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRT 67
           +G G +  E +   D T   +P+ CDLC K+Y+ AKH WGHV + H+GHP+VTC  C R 
Sbjct: 240 VGAGDVIGEKVLTDDHTSYKRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRI 299

Query: 68  FSSIANLAEHKRSRHG 83
           +S+  NL EH +SRH 
Sbjct: 300 YSTRTNLEEHIKSRHA 315

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322792476|gb|EFZ16460.1| hypothetical protein SINV_80660 [Solenopsis invicta]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 41/56 (73%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           +P+ CDLC K+Y+ AKH WGHV + H+GHP+VTC  C R +S+  NL EH +SRH 
Sbjct: 227 RPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRYNLDEHIKSRHA 282

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270008760|gb|EFA05208.1| hypothetical protein TcasGA2_TC015347 [Tribolium castaneum]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 3/64 (4%)

Query: 22  FRFDRTKPHS---CDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHK 78
           F   R   HS   CDLC K Y    HLW HV   H+GHPS+TC +C +T +S  +LA+H 
Sbjct: 419 FSTHRRSQHSIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCYKTSASKYHLAQHF 478

Query: 79  RSRH 82
              H
Sbjct: 479 NKIH 482

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|281339216|gb|EFB14800.1| hypothetical protein PANDA_017418 [Ailuropoda melanoleuca]

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
           KP+ C++CGK + +  HLWGH +  H G     CNVCG+ FS  +NL +HKR
Sbjct: 290 KPYKCNVCGKDFMIRSHLWGHER-IHTGEKPYKCNVCGKAFSECSNLVQHKR 340

Source: Ailuropoda melanoleuca

Species: Ailuropoda melanoleuca

Genus: Ailuropoda

Family: Ursidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
RGD|1308983	588	Zfp192 "zinc finger protein 19	0.585	0.093	0.482	2.2e-10
UNIPROTKB|I3LNU1	481	I3LNU1 "Uncharacterized protei	0.585	0.114	0.446	3.7e-10
UNIPROTKB|J9PA54	474	LOC100684340 "Uncharacterized	0.585	0.116	0.428	5.9e-10
UNIPROTKB|J9NXL5	559	ZNF808 "Uncharacterized protei	0.585	0.098	0.446	2.1e-09
UNIPROTKB|E2R7J3	577	ZNF192 "Uncharacterized protei	0.585	0.095	0.482	4.6e-09
UNIPROTKB|A6QQG2	578	ZNF192 "Uncharacterized protei	0.585	0.095	0.482	4.7e-09
UNIPROTKB|Q15776	578	ZKSCAN8 "Zinc finger protein w	0.585	0.095	0.482	4.7e-09
UNIPROTKB|J9NT74	412	ZNF260 "Uncharacterized protei	0.606	0.138	0.465	5.6e-09
UNIPROTKB|F1RZZ7	814	F1RZZ7 "Uncharacterized protei	0.585	0.067	0.464	5.9e-09
UNIPROTKB|F1Q138	279	ZNF500 "Uncharacterized protei	0.744	0.250	0.364	6.1e-09

RGD|1308983 Zfp192 "zinc finger protein 192" [Rattus norvegicus (taxid:10116)]

 Score = 144 (55.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
 Identities = 27/56 (48%), Positives = 33/56 (58%)

Query:    28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
             KP+ CD CGKT+  + HL GH +S H G     CN CGR FS  + L EH+R   G
Sbjct:   470 KPYECDECGKTFRRSSHLIGHQRS-HTGEKPYKCNECGRAFSQKSGLIEHQRIHTG 524

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

UNIPROTKB|I3LNU1 I3LNU1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 153 (58.9 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query:    28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
             KP+ C++CGK + +  HLWGH ++ H G     C+ CG+ FS  +NLA+HKR   G
Sbjct:   307 KPYKCNVCGKDFMIRSHLWGHERT-HTGERPYKCDECGKAFSEHSNLAQHKRIHTG 361

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9PA54 LOC100684340 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 151 (58.2 bits), Expect = 5.9e-10, P = 5.9e-10
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query:    28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
             KP+ C++CGK + +  HLWGH +  H G     C+ CG+ FS  +NL +HKR   G
Sbjct:   304 KPYKCNVCGKDFMIRSHLWGHER-IHTGEKPYKCDECGKAFSECSNLVQHKRIHSG 358

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9NXL5 ZNF808 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 147 (56.8 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 25/56 (44%), Positives = 35/56 (62%)

Query:    28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
             KP +C++CGK + +   LWGH +  H G     C+ CG+ FSS +NLA+HKR   G
Sbjct:   389 KPFTCNVCGKNFMIPSQLWGHER-IHTGEKPYKCSECGKAFSSGSNLAQHKRIHSG 443

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E2R7J3 ZNF192 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 144 (55.7 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 27/56 (48%), Positives = 33/56 (58%)

Query:    28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
             KP+ CD CGKT+  + HL GH +S H G     CN CGR FS  + L EH+R   G
Sbjct:   459 KPYECDECGKTFRRSSHLIGHQRS-HTGEKPYKCNECGRAFSQKSGLIEHQRIHTG 513

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|A6QQG2 ZNF192 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 144 (55.7 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 27/56 (48%), Positives = 33/56 (58%)

Query:    28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
             KP+ CD CGKT+  + HL GH +S H G     CN CGR FS  + L EH+R   G
Sbjct:   460 KPYECDECGKTFRRSSHLIGHQRS-HTGEKPYKCNECGRAFSQKSGLIEHQRIHTG 514

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q15776 ZKSCAN8 "Zinc finger protein with KRAB and SCAN domains 8" [Homo sapiens (taxid:9606)]

 Score = 144 (55.7 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 27/56 (48%), Positives = 33/56 (58%)

Query:    28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
             KP+ CD CGKT+  + HL GH +S H G     CN CGR FS  + L EH+R   G
Sbjct:   460 KPYECDECGKTFRRSSHLIGHQRS-HTGEKPYKCNECGRAFSQKSGLIEHQRIHTG 514

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|J9NT74 ZNF260 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 141 (54.7 bits), Expect = 5.6e-09, P = 5.6e-09
 Identities = 27/58 (46%), Positives = 34/58 (58%)

Query:    26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
             R KPH CD CGKT+ L ++L  H K  H G  S  C  CG+ FS +++L  H RS  G
Sbjct:    23 REKPHECDECGKTFNLKQNLIEH-KKMHTGEKSHECTECGKVFSRVSSLTLHLRSHMG 79

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1RZZ7 F1RZZ7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 145 (56.1 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 26/56 (46%), Positives = 32/56 (57%)

Query:    28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
             KPH CD+CGK +    HL GH ++ H G     C+ CGR F   ANLA H+R   G
Sbjct:   335 KPHQCDMCGKVFHRRSHLTGHQRT-HSGEKPFQCSECGRVFREKANLASHQRIHAG 389

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1Q138 ZNF500 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 119 (46.9 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
 Identities = 27/74 (36%), Positives = 39/74 (52%)

Query:    13 GLGIPAEPLFRFD--RT-KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFS 69
             G+  P +PL R    R  KP++C  CGK ++   HL  H ++ H G     C VCG+ FS
Sbjct:    80 GMTRPEQPLERGGPRRVEKPYTCPECGKGFSKTSHLTKHQRT-HTGERPYKCQVCGKGFS 138

Query:    70 SIANLAEHKRSRHG 83
               +N + H+R   G
Sbjct:   139 DRSNFSTHQRVHTG 152

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	94
cd11674	1166	cd11674, lambda-1, inner capsid protein lambda-1 o	5e-05

>gnl|CDD|212564 cd11674, lambda-1, inner capsid protein lambda-1 or VP3

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 49 VKSAHQGHPSV-TCNVCGRTFSSIANLAEHKRSRHGI 84
           K A   +PS   CNVC   FSS+  LAEH+R+ H I
Sbjct: 63 SKKATPINPSSYVCNVCMAEFSSMDQLAEHQRTTHSI 99

The reovirus inner capsid protein lambda-1 displays nucleoside triphosphate phosphohydrolase (NTPase), RNA-5'-triphosphatase (RTPase), and RNA helicase activity and may play a role in the transcription of the virus genome, the unwinding or reannealing of double-stranded RNA during RNA synthesis. The RTPase activity constitutes the first step in the capping of RNA, resulting in a 5'-diphosphorylated RNA plus-strand. lambda1 is an Orthoreovirus core protein, VP3 is the homologous core protein in Aquareoviruses. Length = 1166

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	94
KOG2462|consensus	279		99.9
KOG2462|consensus	279		99.81
KOG3623|consensus	1007		99.66
KOG3623|consensus	1007		99.6
KOG3576|consensus	267		99.47
KOG3576|consensus	267		99.44
PHA02768	55	hypothetical protein; Provisional	99.22
PHA00733	128	hypothetical protein	99.21
KOG1074|consensus	958		99.17
KOG3608|consensus	467		99.08
KOG3608|consensus	467		99.0
KOG1074|consensus	958		99.0
PHA00616	44	hypothetical protein	98.95
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.9
PLN03086	567	PRLI-interacting factor K; Provisional	98.86
PHA00616	44	hypothetical protein	98.76
PHA02768	55	hypothetical protein; Provisional	98.71
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.71
PHA00732	79	hypothetical protein	98.7
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.55
PLN03086	567	PRLI-interacting factor K; Provisional	98.39
PHA00733	128	hypothetical protein	98.38
KOG3993|consensus	500		98.35
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.33
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.12
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.12
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	98.07
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.96
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.95
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.94
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.82
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.79
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.68
smart00355	26	ZnF_C2H2 zinc finger.	97.54
KOG3993|consensus	500		97.45
smart00355	26	ZnF_C2H2 zinc finger.	97.34
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.29
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.22
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.17
PRK04860	160	hypothetical protein; Provisional	97.14
PHA00732	79	hypothetical protein	97.06
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.96
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.94
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.64
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.41
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.22
PRK04860	160	hypothetical protein; Provisional	95.83
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.38
COG5048	467	FOG: Zn-finger [General function prediction only]	95.35
KOG1146|consensus	1406		95.08
KOG2186|consensus	276		94.68
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.15
COG4049	65	Uncharacterized protein containing archaeal-type C	93.92
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.22
PHA00626	59	hypothetical protein	92.22
COG5189	423	SFP1 Putative transcriptional repressor regulating	91.97
KOG4173|consensus	253		91.94
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	91.84
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	90.95
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	90.41
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	90.38
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	90.33
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	90.2
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	89.04
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	88.11
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	87.71
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	87.55
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	86.93
COG1592	166	Rubrerythrin [Energy production and conversion]	86.6
PRK06266	178	transcription initiation factor E subunit alpha; V	85.98
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	85.79
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	85.75
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	85.43
smart00531	147	TFIIE Transcription initiation factor IIE.	84.92
COG4957	148	Predicted transcriptional regulator [Transcription	81.89
COG5048	467	FOG: Zn-finger [General function prediction only]	81.59
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	80.95
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	80.91
PF14353	128	CpXC: CpXC protein	80.85
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	80.74
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	80.58

>KOG2462|consensus

Probab=99.90  E-value=1.3e-24  Score=126.57  Aligned_cols=87  Identities=22%  Similarity=0.499  Sum_probs=79.0

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      +.|++|++.|..-.. +..|+++|+  -++.|.+||+.|.+.+-|+.|+ +.|++||||.|+.|++.|...++|..|+++
T Consensus       162 ~~C~~C~K~YvSmpA-LkMHirTH~--l~c~C~iCGKaFSRPWLLQGHi-RTHTGEKPF~C~hC~kAFADRSNLRAHmQT  237 (279)
T KOG2462|consen  162 FSCKYCGKVYVSMPA-LKMHIRTHT--LPCECGICGKAFSRPWLLQGHI-RTHTGEKPFSCPHCGKAFADRSNLRAHMQT  237 (279)
T ss_pred             ccCCCCCceeeehHH-HhhHhhccC--CCcccccccccccchHHhhccc-ccccCCCCccCCcccchhcchHHHHHHHHh
Confidence            578999998887333 367888888  5899999999999999999999 799999999999999999999999999999


Q ss_pred             hcCCCCceEee
Q psy12166         81 RHGITGFVVSA   91 (94)
Q Consensus        81 ~~~~k~~~C~~   91 (94)
                      |.+.|.|.|..
T Consensus       238 HS~~K~~qC~~  248 (279)
T KOG2462|consen  238 HSDVKKHQCPR  248 (279)
T ss_pred             hcCCccccCcc
Confidence            99999999975

>KOG2462|consensus

Probab=99.81  E-value=1.2e-20  Score=110.11  Aligned_cols=78  Identities=26%  Similarity=0.505  Sum_probs=71.3

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      .+|..||+.|..+ =+++.|+++|+|||||.|+.|++.|...++|+.|| ..|.+.|.|+|..|+|+|...+.|.+|...
T Consensus       188 c~C~iCGKaFSRP-WLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHm-QTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  188 CECGICGKAFSRP-WLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHM-QTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             cccccccccccch-HHhhcccccccCCCCccCCcccchhcchHHHHHHH-HhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            4699999998863 34578999999999999999999999999999999 799999999999999999999999999764

>KOG3623|consensus

Probab=99.66  E-value=7.1e-18  Score=109.13  Aligned_cols=66  Identities=27%  Similarity=0.504  Sum_probs=48.2

Q ss_pred             CCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEeee
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSAR   92 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~~   92 (94)
                      .+.+|.|+.|++.|...++|.+|- ..|++.+||+|.+|.+.|+++.+|.-|+|.|.|+|||.|+.+
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHK-YEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKC  956 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHK-YEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKC  956 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhh-hhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhh
Confidence            345777777777777777777775 677777777777777777777777777777777777777654

>KOG3623|consensus

Probab=99.60  E-value=1.9e-16  Score=102.72  Aligned_cols=77  Identities=22%  Similarity=0.494  Sum_probs=70.3

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR   79 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~   79 (94)
                      +-|+-|++.|.-..++ .+|.-.|+|++||+|.+|.+.|..+..|..|. +.|.++|||+|..|++.|.+++.+..||-
T Consensus       895 yaCDqCDK~FqKqSSL-aRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHk-RLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSL-ARHKYEHSGQRPYQCIICKKAFKHKHHLTEHK-RLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             chHHHHHHHHHhhHHH-HHhhhhhcCCCCcccchhhHhhhhhhhhhhhh-hhccCCCcchhhhhhhhcccccchHhhhc
Confidence            4588899888876665 57788999999999999999999999999998 79999999999999999999999999975

>KOG3576|consensus

Probab=99.47  E-value=1.8e-15  Score=85.68  Aligned_cols=64  Identities=27%  Similarity=0.642  Sum_probs=40.1

Q ss_pred             CCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      +...|.|.+|++.|....-|.+|+ ..|...+.+.|..||+.|.....|..|+++|+|.+||+|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~-kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~  177 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHL-KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCS  177 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHh-hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchh
Confidence            345566666666666666666666 4566666666666666666666666666666666666664

>KOG3576|consensus

Probab=99.44  E-value=1.3e-14  Score=82.24  Aligned_cols=81  Identities=23%  Similarity=0.485  Sum_probs=72.2

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.|..|++.|....-+ ..|+..|...+.|-|..||+.|...-+|.+|+ +.|++.+||.|..|+++|.+.-.|..|.+.
T Consensus       118 ftCrvCgK~F~lQRml-nrh~kch~~vkr~lct~cgkgfndtfdlkrh~-rthtgvrpykc~~c~kaftqrcsleshl~k  195 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRML-NRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHT-RTHTGVRPYKCSLCEKAFTQRCSLESHLKK  195 (267)
T ss_pred             eeeehhhhhhhHHHHH-HHHhhhccHHHHHHHhhccCcccchhhhhhhh-ccccCccccchhhhhHHHHhhccHHHHHHH
Confidence            5788999888875543 57889999999999999999999999999999 799999999999999999999999999876


Q ss_pred             hcC
Q psy12166         81 RHG   83 (94)
Q Consensus        81 ~~~   83 (94)
                      -+|
T Consensus       196 vhg  198 (267)
T KOG3576|consen  196 VHG  198 (267)
T ss_pred             HcC
Confidence            554

>PHA02768 hypothetical protein; Provisional

Probab=99.22  E-value=6.1e-12  Score=57.62  Aligned_cols=43  Identities=21%  Similarity=0.468  Sum_probs=38.4

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHH
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANL   74 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l   74 (94)
                      -|+|+.||+.|...++|..|+ +.|+  +++.|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~-r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHL-RKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHH-HhcC--CcccCCcccceeccccee
Confidence            489999999999999999999 6788  689999999999977655

>PHA00733 hypothetical protein

Probab=99.21  E-value=2.3e-11  Score=65.47  Aligned_cols=56  Identities=25%  Similarity=0.526  Sum_probs=49.5

Q ss_pred             CCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         25 DRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        25 ~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      .+++||.|+.|++.|.....|..|+ ..+  +.++.|..|++.|.....|..|+...++
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~-r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHI-RYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHH-hcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            3478999999999999999999998 555  3579999999999999999999988765

>KOG1074|consensus

Probab=99.17  E-value=1.9e-12  Score=85.41  Aligned_cols=54  Identities=28%  Similarity=0.645  Sum_probs=28.5

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      |.+|.+|.+...-...|+.|. +.|++++||+|.+||+.|..+.+|+.|+.+|..
T Consensus       605 PNqCiiC~rVlSC~saLqmHy-rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka  658 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHY-RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKA  658 (958)
T ss_pred             ccceeeeeecccchhhhhhhh-hcccCcCccccccccchhccccchhhccccccc
Confidence            445555555555555555555 455555555555555555555555555555443

>KOG3608|consensus

Probab=99.08  E-value=9.9e-12  Score=75.69  Aligned_cols=79  Identities=19%  Similarity=0.393  Sum_probs=45.5

Q ss_pred             CCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCc--cccccCCHHHHHHHHH
Q psy12166          2 DCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEHKR   79 (94)
Q Consensus         2 ~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~--C~~~f~~~~~l~~h~~   79 (94)
                      .|+-|+.+-....++..+.+..|...+||+|..|++.+.....|.+|. ..|. +..|+|..  |..++.....+..|++
T Consensus       265 kCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~-~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~  342 (467)
T KOG3608|consen  265 KCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHV-QVHS-KTVYQCEHPDCHYSVRTYTQMRRHFL  342 (467)
T ss_pred             cccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHH-Hhcc-ccceecCCCCCcHHHHHHHHHHHHHH
Confidence            455555554444444344444555666666666666666666666665 4555 44566655  6666666666666655


Q ss_pred             Hhc
Q psy12166         80 SRH   82 (94)
Q Consensus        80 ~~~   82 (94)
                      .++
T Consensus       343 evh  345 (467)
T KOG3608|consen  343 EVH  345 (467)
T ss_pred             Hhc
Confidence            543

>KOG3608|consensus

Probab=99.00  E-value=2.3e-10  Score=69.89  Aligned_cols=86  Identities=19%  Similarity=0.297  Sum_probs=71.0

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.|.-|.+.|..+.- +..|++.|.  +.|+|++|+......++|..|++..|...+||.|..|.+.+...+.|++|..+
T Consensus       238 fqC~~C~KrFaTekl-L~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~  314 (467)
T KOG3608|consen  238 FQCAQCFKRFATEKL-LKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV  314 (467)
T ss_pred             hHHHHHHHHHhHHHH-HHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHh
Confidence            456666666665433 356667776  57999999999999999999998899999999999999999999999999998


Q ss_pred             hcCCCCceEe
Q psy12166         81 RHGITGFVVS   90 (94)
Q Consensus        81 ~~~~k~~~C~   90 (94)
                      |. +..|.|+
T Consensus       315 HS-~~~y~C~  323 (467)
T KOG3608|consen  315 HS-KTVYQCE  323 (467)
T ss_pred             cc-ccceecC
Confidence            87 6778885

>KOG1074|consensus

Probab=99.00  E-value=1.4e-10  Score=76.85  Aligned_cols=81  Identities=22%  Similarity=0.486  Sum_probs=66.2

Q ss_pred             CCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCC----CeecC---ccccccCCHHHH
Q psy12166          2 DCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHP----SVTCN---VCGRTFSSIANL   74 (94)
Q Consensus         2 ~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~----~~~c~---~C~~~f~~~~~l   74 (94)
                      +|-+|-........ ++.|+++|+|++||+|.+||+.|+.+-+|+.|+ .+|....    .+.|+   +|-+.|...-.|
T Consensus       607 qCiiC~rVlSC~sa-LqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  607 QCIICLRVLSCPSA-LQMHYRTHTGERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ceeeeeecccchhh-hhhhhhcccCcCccccccccchhccccchhhcc-cccccCccccccccCCchhhhcccccccccc
Confidence            35555555555444 368999999999999999999999999999999 8887654    46788   899999999999


Q ss_pred             HHHHHHhcCC
Q psy12166         75 AEHKRSRHGI   84 (94)
Q Consensus        75 ~~h~~~~~~~   84 (94)
                      ..|++.|.+.
T Consensus       685 pQhIriH~~~  694 (958)
T KOG1074|consen  685 PQHIRIHLGG  694 (958)
T ss_pred             cceEEeecCC
Confidence            9999998843

>PHA00616 hypothetical protein

Probab=98.95  E-value=6.7e-10  Score=48.67  Aligned_cols=31  Identities=26%  Similarity=0.430  Sum_probs=15.0

Q ss_pred             eecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      |+|+.||+.|.....+..|++.|+|++++.|
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            4444444444444444444444444444444

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.90  E-value=1.3e-09  Score=42.99  Aligned_cols=26  Identities=35%  Similarity=0.824  Sum_probs=21.5

Q ss_pred             HHHhHHHhhcCCCCCeecCccccccCC
Q psy12166         44 HLWGHVKSAHQGHPSVTCNVCGRTFSS   70 (94)
Q Consensus        44 ~l~~H~~~~h~~~~~~~c~~C~~~f~~   70 (94)
                      +|.+|+ ..|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~-~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHM-RTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHH-HHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHh-hhcCCCCCCCCCCCcCeeCc
Confidence            478888 68999999999999988863

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.86  E-value=2.3e-09  Score=69.46  Aligned_cols=82  Identities=20%  Similarity=0.399  Sum_probs=62.0

Q ss_pred             CCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCC----------H
Q psy12166          2 DCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSS----------I   71 (94)
Q Consensus         2 ~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~----------~   71 (94)
                      .|..|+..+..  ..+..|+..+.  .++.|+ ||+.+ ....|..|+ ..|...+++.|.+|+..+..          .
T Consensus       455 ~C~~Cgk~f~~--s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~-~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~  527 (567)
T PLN03086        455 HCEKCGQAFQQ--GEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQ-ASTCPLRLITCRFCGDMVQAGGSAMDVRDRL  527 (567)
T ss_pred             cCCCCCCccch--HHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhh-hccCCCCceeCCCCCCccccCccccchhhhh
Confidence            57888777642  33356666664  689999 99755 568899998 78888999999999988852          3


Q ss_pred             HHHHHHHHHhcCCCCceEee
Q psy12166         72 ANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        72 ~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ..|..|..+. |.+++.|..
T Consensus       528 s~Lt~HE~~C-G~rt~~C~~  546 (567)
T PLN03086        528 RGMSEHESIC-GSRTAPCDS  546 (567)
T ss_pred             hhHHHHHHhc-CCcceEccc
Confidence            4788898875 888998853

>PHA00616 hypothetical protein

Probab=98.76  E-value=4.1e-09  Score=46.20  Aligned_cols=34  Identities=18%  Similarity=0.299  Sum_probs=31.1

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      ||+|+.||+.|.....|..|+ ..|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~-r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHL-LSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHH-HHhcCCCccceeE
Confidence            689999999999999999999 6888889988775

>PHA02768 hypothetical protein; Provisional

Probab=98.71  E-value=9.1e-09  Score=47.21  Aligned_cols=30  Identities=20%  Similarity=0.553  Sum_probs=26.5

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      .|.|+.||+.|...++|..|+++|.  ++|+|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc   34 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKL   34 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccC
Confidence            5899999999999999999999999  45544

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.71  E-value=6.1e-08  Score=44.78  Aligned_cols=52  Identities=29%  Similarity=0.594  Sum_probs=41.4

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCC-CCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGH-PSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~-~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      .|+|+.|++ ......|..|....|..+ +.+.|++|...+.  .+|..|+..+++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            589999999 455788999987788765 5799999987544  488899887653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.70  E-value=1.2e-08  Score=50.60  Aligned_cols=47  Identities=28%  Similarity=0.544  Sum_probs=37.2

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHh
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~   81 (94)
                      ||.|..|++.|.....|..|++..|.   ++.|+.|++.|..   +..|.++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~~---l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYRR---LNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeCC---hhhhhccc
Confidence            68899999999999999999832455   3589999999984   56676543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.55  E-value=8.2e-09  Score=40.70  Aligned_cols=24  Identities=25%  Similarity=0.595  Sum_probs=20.9

Q ss_pred             CCCcccCCCCCCccccccccccCC
Q psy12166         18 AEPLFRFDRTKPHSCDLCGKTYTL   41 (94)
Q Consensus        18 ~~~~~~h~~~~~~~c~~c~~~f~~   41 (94)
                      ..|++.|++++||.|+.|++.|.+
T Consensus         3 ~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    3 RRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHhhhcCCCCCCCCCCCcCeeCc
Confidence            357889999999999999999863

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.39  E-value=7.6e-07  Score=58.14  Aligned_cols=60  Identities=15%  Similarity=0.453  Sum_probs=50.0

Q ss_pred             CCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         25 DRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        25 ~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      ..++++.|+.|++.|. ...|..|+ ..+.  +++.|+ ||+.+ ....|..|+.+|-+++++.|.
T Consensus       449 el~~H~~C~~Cgk~f~-~s~LekH~-~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~  508 (567)
T PLN03086        449 EAKNHVHCEKCGQAFQ-QGEMEKHM-KVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCR  508 (567)
T ss_pred             ccccCccCCCCCCccc-hHHHHHHH-HhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCC
Confidence            3456789999999996 57799998 5553  789999 99755 568899999999999999985

>PHA00733 hypothetical protein

Probab=98.38  E-value=2.3e-07  Score=50.08  Aligned_cols=63  Identities=17%  Similarity=0.129  Sum_probs=48.1

Q ss_pred             CCCCccccccccccCChHHHHhH--HH--hhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGH--VK--SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H--~~--~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      ..+++.|.+|...|.....|..+  +.  ..+.+.++|.|..|++.|.....|..|++.+  +.+|.|.
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~  103 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP  103 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC
Confidence            35789999999888777666555  10  1233478999999999999999999999875  3567775

>KOG3993|consensus

Probab=98.35  E-value=4.9e-08  Score=61.03  Aligned_cols=79  Identities=23%  Similarity=0.400  Sum_probs=58.4

Q ss_pred             CCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCC--------------------------
Q psy12166          3 CGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGH--------------------------   56 (94)
Q Consensus         3 C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~--------------------------   56 (94)
                      |.-|...|+..-.+ .+|.-...-...|+|+.|++.|.-..+|..|. ++|.-.                          
T Consensus       270 CqLCK~kYeD~F~L-AQHrC~RIV~vEYrCPEC~KVFsCPANLASHR-RWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  270 CQLCKEKYEDAFAL-AQHRCPRIVHVEYRCPECDKVFSCPANLASHR-RWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHhhhhHHHH-hhccCCeeEEeeecCCcccccccCchhhhhhh-cccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            55555555553333 44444434445699999999999999999996 788421                          


Q ss_pred             -------CCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         57 -------PSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        57 -------~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                             -.|.|..|++.|.+...|..|+-+|+.
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                   137899999999999999999888763

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.33  E-value=6.7e-07  Score=34.00  Aligned_cols=22  Identities=45%  Similarity=0.943  Sum_probs=11.2

Q ss_pred             eecCccccccCCHHHHHHHHHH
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.|+.|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.12  E-value=1.6e-06  Score=32.91  Aligned_cols=21  Identities=29%  Similarity=0.786  Sum_probs=19.6

Q ss_pred             ccccccccccCChHHHHhHHH
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVK   50 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~   50 (94)
                      |.|+.|++.|.....|..|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            689999999999999999984

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.12  E-value=4.1e-06  Score=31.79  Aligned_cols=23  Identities=35%  Similarity=0.891  Sum_probs=10.8

Q ss_pred             eecCccccccCCHHHHHHHHHHh
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~   81 (94)
                      |.|++|++.|.....|..|+.++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555555555555555555443

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.07  E-value=8.2e-06  Score=36.71  Aligned_cols=34  Identities=29%  Similarity=0.471  Sum_probs=21.1

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCCCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITG   86 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~   86 (94)
                      ..++.|-.|++|+..+.++.+|..|+...++.||
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3456677788888888888888888877777765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.96  E-value=8.6e-06  Score=30.86  Aligned_cols=22  Identities=27%  Similarity=0.797  Sum_probs=18.0

Q ss_pred             ccccccccccCChHHHHhHHHh
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKS   51 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~   51 (94)
                      |.|++|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            6899999999999999999943

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.95  E-value=7.5e-06  Score=32.23  Aligned_cols=20  Identities=40%  Similarity=0.763  Sum_probs=10.0

Q ss_pred             ccccccccccCChHHHHhHH
Q psy12166         30 HSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~   49 (94)
                      |+|..|++.|.....|..|+
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~   21 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHK   21 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCccCCccCChhHHHHHh
Confidence            44555555555555555554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.94  E-value=9.7e-06  Score=41.50  Aligned_cols=73  Identities=21%  Similarity=0.261  Sum_probs=21.8

Q ss_pred             CCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHh
Q psy12166          2 DCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus         2 ~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~   81 (94)
                      +|..|+..+.....+..+....|.-..+     ....+.....+..++ .. .....+.|.+|++.|.....|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-----~~~~l~~~~~~~~~~-~~-~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-----DQKYLVDPNRLLNYL-RK-KVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc-----ccccccccccccccc-cc-ccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5888888877755554333334443222     011122233333333 11 1223699999999999999999999974

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.82  E-value=1.6e-05  Score=31.26  Aligned_cols=26  Identities=50%  Similarity=0.939  Sum_probs=23.4

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      +|.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            58999999999999999999987753

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.79  E-value=6e-06  Score=50.43  Aligned_cols=53  Identities=26%  Similarity=0.608  Sum_probs=42.9

Q ss_pred             CCCccccc--cccccCChHHHHhHHHhhc------------------CCCCCeecCccccccCCHHHHHHHHH
Q psy12166         27 TKPHSCDL--CGKTYTLAKHLWGHVKSAH------------------QGHPSVTCNVCGRTFSSIANLAEHKR   79 (94)
Q Consensus        27 ~~~~~c~~--c~~~f~~~~~l~~H~~~~h------------------~~~~~~~c~~C~~~f~~~~~l~~h~~   79 (94)
                      ++||.|++  |.+.+.....|.-|++.-|                  ...|||+|++|++.++..-.|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            49999997  9999999999998874333                  11379999999999999888887754

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.68  E-value=7e-06  Score=37.85  Aligned_cols=50  Identities=18%  Similarity=0.355  Sum_probs=33.8

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCC-CCCccccccccccCChHHHHhHHHhhc
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDR-TKPHSCDLCGKTYTLAKHLWGHVKSAH   53 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~-~~~~~c~~c~~~f~~~~~l~~H~~~~h   53 (94)
                      |.|++|+..++ ...+..+-...|.. .+.+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~~~~-~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGKGFS-ESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCCccC-HHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            68999999433 34444444555654 35799999998654  48999985433

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.54  E-value=0.00013  Score=27.82  Aligned_cols=19  Identities=32%  Similarity=0.674  Sum_probs=9.5

Q ss_pred             cccccccccCChHHHHhHH
Q psy12166         31 SCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        31 ~c~~c~~~f~~~~~l~~H~   49 (94)
                      .|..|++.|.....|..|+
T Consensus         2 ~C~~C~~~f~~~~~l~~H~   20 (26)
T smart00355        2 RCPECGKVFKSKSALKEHM   20 (26)
T ss_pred             CCCCCcchhCCHHHHHHHH
Confidence            4445555555555555554

>KOG3993|consensus

Probab=97.45  E-value=2.1e-05  Score=49.67  Aligned_cols=54  Identities=33%  Similarity=0.494  Sum_probs=45.2

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      -|-|.+|...|...-.|.+|. -.-....-|+|+.|+|.|+-+.+|..|++.|.-
T Consensus       267 dyiCqLCK~kYeD~F~LAQHr-C~RIV~vEYrCPEC~KVFsCPANLASHRRWHKP  320 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHR-CPRIVHVEYRCPECDKVFSCPANLASHRRWHKP  320 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhcc-CCeeEEeeecCCcccccccCchhhhhhhcccCC
Confidence            478999998888888888884 444445579999999999999999999998853

>smart00355 ZnF_C2H2 zinc finger

Probab=97.34  E-value=0.00028  Score=26.83  Aligned_cols=24  Identities=38%  Similarity=0.750  Sum_probs=21.2

Q ss_pred             eecCccccccCCHHHHHHHHHHhc
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      +.|..|++.|.....+..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            578999999999999999998664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.29  E-value=0.00039  Score=31.36  Aligned_cols=31  Identities=23%  Similarity=0.568  Sum_probs=21.4

Q ss_pred             CCCCCCccccccccccCChHHHHhHHHhhcC
Q psy12166         24 FDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        24 h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      +..+.|..|++|+..+.+..+|.+|++..|.
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            3457899999999999999999999965554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.22  E-value=0.0005  Score=26.11  Aligned_cols=21  Identities=29%  Similarity=0.542  Sum_probs=9.2

Q ss_pred             ecCccccccCCHHHHHHHHHHh
Q psy12166         60 TCNVCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        60 ~c~~C~~~f~~~~~l~~h~~~~   81 (94)
                      .|+.|+.... ...|..|++.+
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCcCC-HHHHHHHHHhh
Confidence            4455554444 44555555443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.17  E-value=0.00039  Score=26.63  Aligned_cols=20  Identities=40%  Similarity=0.899  Sum_probs=10.2

Q ss_pred             ecCccccccCCHHHHHHHHH
Q psy12166         60 TCNVCGRTFSSIANLAEHKR   79 (94)
Q Consensus        60 ~c~~C~~~f~~~~~l~~h~~   79 (94)
                      .|.+|.+.|.....+..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            45555555555555555544

>PRK04860 hypothetical protein; Provisional

Probab=97.14  E-value=0.00033  Score=39.29  Aligned_cols=38  Identities=24%  Similarity=0.516  Sum_probs=27.6

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCH
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSI   71 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~   71 (94)
                      +|.|. |+.   ....+.+|. .++.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~-ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHN-RVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHH-HHhcCCccEECCCCCceeEEe
Confidence            57786 776   455677887 678888888888888766543

>PHA00732 hypothetical protein

Probab=97.06  E-value=0.00055  Score=34.01  Aligned_cols=26  Identities=27%  Similarity=0.510  Sum_probs=22.9

Q ss_pred             CeecCccccccCCHHHHHHHHHH-hcC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRS-RHG   83 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~-~~~   83 (94)
                      ||.|..|++.|.....|..|++. |.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~   27 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL   27 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC
Confidence            57899999999999999999985 554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.96  E-value=0.00073  Score=25.63  Aligned_cols=23  Identities=26%  Similarity=0.495  Sum_probs=17.2

Q ss_pred             ccccccccccCChHHHHhHHHhhc
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAH   53 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h   53 (94)
                      |.|+.|++... ...|.+|++..|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            68999999888 889999985433

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.94  E-value=0.00052  Score=26.26  Aligned_cols=21  Identities=29%  Similarity=0.803  Sum_probs=19.2

Q ss_pred             ccccccccccCChHHHHhHHH
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVK   50 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~   50 (94)
                      |.|.+|+..|.....+..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            679999999999999999983

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.64  E-value=0.0024  Score=24.61  Aligned_cols=18  Identities=39%  Similarity=1.006  Sum_probs=8.7

Q ss_pred             ecCccccccCCHHHHHHHH
Q psy12166         60 TCNVCGRTFSSIANLAEHK   78 (94)
Q Consensus        60 ~c~~C~~~f~~~~~l~~h~   78 (94)
                      .|+.||+.| .++.|..|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            455555555 333344443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.41  E-value=0.0016  Score=25.47  Aligned_cols=20  Identities=30%  Similarity=0.659  Sum_probs=14.3

Q ss_pred             ccccccccccCChHHHHhHH
Q psy12166         30 HSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~   49 (94)
                      |.|..|++.|.....+..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            56777777777777777665

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.22  E-value=0.0056  Score=31.10  Aligned_cols=24  Identities=29%  Similarity=0.630  Sum_probs=20.6

Q ss_pred             CCccccccccccCChHHHHhHHHh
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKS   51 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~   51 (94)
                      ..+.|..|+..|.....|..|++.
T Consensus        49 ~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   49 ESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCCccCCCCcCHHHHHHHHcC
Confidence            369999999999999999999953

>PRK04860 hypothetical protein; Provisional

Probab=95.83  E-value=0.0062  Score=34.27  Aligned_cols=30  Identities=17%  Similarity=0.376  Sum_probs=25.4

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|.|. |+.   ....+..|.+++.|+++|.|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~  148 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRR  148 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCC
Confidence            58898 986   6667889999999999999953

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.38  E-value=0.019  Score=23.52  Aligned_cols=22  Identities=23%  Similarity=0.605  Sum_probs=12.9

Q ss_pred             CeecCccccccCCHHHHHHHHH
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKR   79 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~   79 (94)
                      +|.|.+|.+.|..+..+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3556666666666655555543

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.35  E-value=0.0032  Score=39.63  Aligned_cols=62  Identities=23%  Similarity=0.428  Sum_probs=54.6

Q ss_pred             CCccccccccccCChHHHHhHHHh--hcCCC--CCeecC--ccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKS--AHQGH--PSVTCN--VCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~--~h~~~--~~~~c~--~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .++.|..|...|.....+..|. .  .|..+  +++.|+  .|++.|.....+..|...|.+.+++.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~-~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHL-RSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cCCCCccccCCccccccccccc-cccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            4688899999999999999998 5  79998  999999  7999999999999999999888777664

>KOG1146|consensus

Probab=95.08  E-value=0.026  Score=40.96  Aligned_cols=57  Identities=28%  Similarity=0.444  Sum_probs=46.4

Q ss_pred             CCCCCCccccccccccCChHHHHhHHHhhcCC------------------------CCCeecCccccccCCHHHHHHHHH
Q psy12166         24 FDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQG------------------------HPSVTCNVCGRTFSSIANLAEHKR   79 (94)
Q Consensus        24 h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~------------------------~~~~~c~~C~~~f~~~~~l~~h~~   79 (94)
                      +.-.+.+.|+.|+..|.....|..|++..|..                        .++|.|..|...+....+|..|+.
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            44458899999999999999999999653321                        246889999999999999999976


Q ss_pred             H
Q psy12166         80 S   80 (94)
Q Consensus        80 ~   80 (94)
                      .
T Consensus       540 S  540 (1406)
T KOG1146|consen  540 S  540 (1406)
T ss_pred             H
Confidence            5

>KOG2186|consensus

Probab=94.68  E-value=0.023  Score=34.13  Aligned_cols=45  Identities=24%  Similarity=0.631  Sum_probs=23.7

Q ss_pred             ccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHH
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHK   78 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~   78 (94)
                      |.|..||....- ..+.+|+ ....+ .-|.|..|+..|.. ..+..|.
T Consensus         4 FtCnvCgEsvKK-p~vekH~-srCrn-~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHM-SRCRN-AYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             Eehhhhhhhccc-cchHHHH-HhccC-CeeEEeeccccccc-chhhhhh
Confidence            556666655442 3455565 44444 34666666666666 2334443

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.15  E-value=0.027  Score=23.11  Aligned_cols=10  Identities=40%  Similarity=0.986  Sum_probs=5.9

Q ss_pred             CCeecCcccc
Q psy12166         57 PSVTCNVCGR   66 (94)
Q Consensus        57 ~~~~c~~C~~   66 (94)
                      .++.|++|+.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4566666653

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.92  E-value=0.036  Score=25.55  Aligned_cols=33  Identities=27%  Similarity=0.386  Sum_probs=24.8

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      ....|+.-+.|+-|+..|....++.+|.+..|.
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            345677788888888888888888888755543

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.22  E-value=0.39  Score=25.16  Aligned_cols=25  Identities=32%  Similarity=0.594  Sum_probs=21.9

Q ss_pred             eec----CccccccCCHHHHHHHHHHhcC
Q psy12166         59 VTC----NVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        59 ~~c----~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      |.|    ..|+..+.....+..|.+.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            679    8899999999999999988765

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PHA00626 hypothetical protein

Probab=92.22  E-value=0.15  Score=23.54  Aligned_cols=14  Identities=21%  Similarity=0.335  Sum_probs=10.5

Q ss_pred             CCccccccccccCC
Q psy12166         28 KPHSCDLCGKTYTL   41 (94)
Q Consensus        28 ~~~~c~~c~~~f~~   41 (94)
                      ..|.|+.||+.|+.
T Consensus        22 nrYkCkdCGY~ft~   35 (59)
T PHA00626         22 DDYVCCDCGYNDSK   35 (59)
T ss_pred             cceEcCCCCCeech
Confidence            56888888877764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=91.97  E-value=0.033  Score=34.71  Aligned_cols=24  Identities=33%  Similarity=0.630  Sum_probs=21.3

Q ss_pred             CCCCccccccccccCChHHHHhHH
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      ..+||+|++|++++.....|.-|.
T Consensus       395 ~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         395 KDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCCceeccccchhhccCccceecc
Confidence            459999999999999998888885

>KOG4173|consensus

Probab=91.94  E-value=0.045  Score=32.07  Aligned_cols=53  Identities=25%  Similarity=0.543  Sum_probs=38.7

Q ss_pred             ccccccccccCChHHHHhHHHhhcC---------CCCCeecCc--cccccCCHHHHHHHHHHhc
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQ---------GHPSVTCNV--CGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~---------~~~~~~c~~--C~~~f~~~~~l~~h~~~~~   82 (94)
                      ..|..|.+.|....-|..|+.-.|-         +..-|+|.+  |+..|.+...-..|+...+
T Consensus       107 ~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  107 NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhc
Confidence            4788899999988888888754442         233477765  8888888888888876544

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=91.84  E-value=0.024  Score=33.37  Aligned_cols=44  Identities=25%  Similarity=0.513  Sum_probs=26.2

Q ss_pred             CCccccccccccCChHHHHhHHHhhc---------CCCCC-----eecCccccccCCH
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAH---------QGHPS-----VTCNVCGRTFSSI   71 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h---------~~~~~-----~~c~~C~~~f~~~   71 (94)
                      +...|++|+..|....-.....+...         .+..|     ..|+.||.++...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            56789999988877644433331111         11122     4699999876654

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=90.95  E-value=0.14  Score=28.76  Aligned_cols=41  Identities=20%  Similarity=0.288  Sum_probs=22.7

Q ss_pred             CCCCCCcccccc--CCCCCCCCcccCCCCCCccccccccccCChHH
Q psy12166          1 MDCGWKKTAYEI--GLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKH   44 (94)
Q Consensus         1 ~~C~~~~~~~~~--~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~   44 (94)
                      +.|++|+.....  ....+..  ..... +.++|+.||+.|.....
T Consensus         1 m~cp~c~~~~~~~~~s~~~~~--~~~~~-~~~~c~~c~~~f~~~e~   43 (154)
T PRK00464          1 MRCPFCGHPDTRVIDSRPAED--GNAIR-RRRECLACGKRFTTFER   43 (154)
T ss_pred             CcCCCCCCCCCEeEeccccCC--CCcee-eeeeccccCCcceEeEe
Confidence            469999865421  1111111  11222 34899999999976543

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=90.41  E-value=0.29  Score=20.47  Aligned_cols=32  Identities=25%  Similarity=0.676  Sum_probs=15.3

Q ss_pred             cccccccccCChHHHHhHHHhhcCCCCCeecCcccccc
Q psy12166         31 SCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTF   68 (94)
Q Consensus        31 ~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f   68 (94)
                      .|+.|+..|...+.      .........+|+.|+..|
T Consensus         4 ~Cp~C~~~y~i~d~------~ip~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPNCQAKYEIDDE------KIPPKGRKVRCSKCGHVF   35 (36)
T ss_pred             ECCCCCCEEeCCHH------HCCCCCcEEECCCCCCEe
Confidence            45556555554443      122223345666665544

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=90.38  E-value=0.29  Score=20.56  Aligned_cols=11  Identities=45%  Similarity=1.147  Sum_probs=6.0

Q ss_pred             CeecCcccccc
Q psy12166         58 SVTCNVCGRTF   68 (94)
Q Consensus        58 ~~~c~~C~~~f   68 (94)
                      ..+|+.|+..|
T Consensus        25 ~vrC~~C~~~f   35 (37)
T PF13719_consen   25 KVRCPKCGHVF   35 (37)
T ss_pred             EEECCCCCcEe
Confidence            45566555544

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=90.33  E-value=0.19  Score=27.53  Aligned_cols=26  Identities=38%  Similarity=0.867  Sum_probs=14.9

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCCCC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGITG   86 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~k~   86 (94)
                      ...|.+||+.|..   |..|+..|+|..|
T Consensus        72 ~i~clecGk~~k~---LkrHL~~~~gltp   97 (132)
T PF05443_consen   72 YIICLECGKKFKT---LKRHLRTHHGLTP   97 (132)
T ss_dssp             -EE-TBT--EESB---HHHHHHHTT-S-H
T ss_pred             eeEEccCCcccch---HHHHHHHccCCCH
Confidence            4678888888877   4788888877554

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=90.20  E-value=0.25  Score=23.15  Aligned_cols=32  Identities=19%  Similarity=0.415  Sum_probs=19.9

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCCCCeecCccc
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCG   65 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~   65 (94)
                      ..|.|+.||......-.      .--....+|.|+.||
T Consensus        26 v~F~CPnCGe~~I~Rc~------~CRk~g~~Y~Cp~CG   57 (61)
T COG2888          26 VKFPCPNCGEVEIYRCA------KCRKLGNPYRCPKCG   57 (61)
T ss_pred             eEeeCCCCCceeeehhh------hHHHcCCceECCCcC
Confidence            46888888866554432      122234578888887

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=89.04  E-value=0.36  Score=20.16  Aligned_cols=33  Identities=18%  Similarity=0.543  Sum_probs=15.7

Q ss_pred             ccccccccccCChHHHHhHHHhhcCCCCCeecCcccccc
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTF   68 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f   68 (94)
                      ..|+.|+..|......      .........|+.|+..|
T Consensus         3 ~~CP~C~~~~~v~~~~------~~~~~~~v~C~~C~~~~   35 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQ------LGANGGKVRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEEEeCHHH------cCCCCCEEECCCCCCEE
Confidence            3566666655543321      11111245666666554

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=88.11  E-value=0.57  Score=20.23  Aligned_cols=25  Identities=32%  Similarity=0.631  Sum_probs=14.2

Q ss_pred             CCCCccccccccccCCh----HHHHhHHH
Q psy12166         26 RTKPHSCDLCGKTYTLA----KHLWGHVK   50 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~----~~l~~H~~   50 (94)
                      ++....|..|++.+...    ..|..|++
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~   41 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLK   41 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHH
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhh
Confidence            45667888888777653    66777763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=87.71  E-value=0.3  Score=20.15  Aligned_cols=25  Identities=24%  Similarity=0.643  Sum_probs=14.1

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCcccc
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGR   66 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~   66 (94)
                      .|.|..||+.+...             ..|..|++|+.
T Consensus         2 ~~~C~~CG~i~~g~-------------~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEGE-------------EAPEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeECC-------------cCCCcCcCCCC
Confidence            36677777553321             13557777764

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=87.55  E-value=0.23  Score=29.39  Aligned_cols=26  Identities=23%  Similarity=0.540  Sum_probs=15.5

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      .|.|..|+|.|.....+.+|+..-|.
T Consensus        77 K~~C~lc~KlFkg~eFV~KHI~nKH~  102 (214)
T PF04959_consen   77 KWRCPLCGKLFKGPEFVRKHIFNKHP  102 (214)
T ss_dssp             EEEE-SSS-EESSHHHHHHHHHHH-H
T ss_pred             EECCCCCCcccCChHHHHHHHhhcCH
Confidence            46677777777777777777665443

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=86.93  E-value=0.72  Score=17.77  Aligned_cols=18  Identities=17%  Similarity=0.457  Sum_probs=11.2

Q ss_pred             cccccccccCChHHHHhHH
Q psy12166         31 SCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        31 ~c~~c~~~f~~~~~l~~H~   49 (94)
                      .|++|++.+ ....+..|+
T Consensus         3 ~CPiC~~~v-~~~~in~HL   20 (26)
T smart00734        3 QCPVCFREV-PENLINSHL   20 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHH
Confidence            567777666 445566665

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=86.60  E-value=0.44  Score=27.13  Aligned_cols=23  Identities=39%  Similarity=1.054  Sum_probs=16.0

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCccc
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCG   65 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~   65 (94)
                      .|.|++||+.              +.++.|-.||+||
T Consensus       134 ~~vC~vCGy~--------------~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGYT--------------HEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCCc--------------ccCCCCCcCCCCC
Confidence            5888888743              3336677888887

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=85.98  E-value=0.44  Score=27.40  Aligned_cols=35  Identities=17%  Similarity=0.412  Sum_probs=25.4

Q ss_pred             CCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCC
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSS   70 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~   70 (94)
                      ...-|.|+.|+..|+....+.          -.|.|+.||.....
T Consensus       114 ~~~~Y~Cp~C~~rytf~eA~~----------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        114 NNMFFFCPNCHIRFTFDEAME----------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CCCEEECCCCCcEEeHHHHhh----------cCCcCCCCCCCCee
Confidence            345788999999888766531          26999999976544

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=85.79  E-value=0.58  Score=26.36  Aligned_cols=35  Identities=17%  Similarity=0.308  Sum_probs=24.9

Q ss_pred             CCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCC
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSS   70 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~   70 (94)
                      ...-|.|+.|+..|+....+.          ..|.|+.||.....
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~----------~~F~Cp~Cg~~L~~  140 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME----------LNFTCPRCGAMLDY  140 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH----------cCCcCCCCCCEeee
Confidence            446688988988888766542          26889999865443

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>smart00614 ZnF_BED BED zinc finger

Probab=85.75  E-value=0.89  Score=20.30  Aligned_cols=27  Identities=26%  Similarity=0.644  Sum_probs=18.6

Q ss_pred             CCccccccccccCCh-----HHHHhHHHhhcC
Q psy12166         28 KPHSCDLCGKTYTLA-----KHLWGHVKSAHQ   54 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~-----~~l~~H~~~~h~   54 (94)
                      ..-.|..|++.+...     +.|.+|++..|.
T Consensus        17 ~~a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       17 QRAKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             eEEEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            356788899887655     578888743444

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=85.43  E-value=0.57  Score=27.81  Aligned_cols=31  Identities=23%  Similarity=0.523  Sum_probs=23.1

Q ss_pred             CCCCCccccccccccCChHHHHhHHHhhcCC
Q psy12166         25 DRTKPHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        25 ~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      ..+..|.|..|+|.|.-.....+|+...|..
T Consensus        73 ~~~~K~~C~lc~KlFkg~eFV~KHI~nKH~e  103 (214)
T PF04959_consen   73 EDEDKWRCPLCGKLFKGPEFVRKHIFNKHPE  103 (214)
T ss_dssp             SSSEEEEE-SSS-EESSHHHHHHHHHHH-HH
T ss_pred             HcCCEECCCCCCcccCChHHHHHHHhhcCHH
Confidence            3456799999999999999999999766653

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=84.92  E-value=1  Score=24.97  Aligned_cols=40  Identities=20%  Similarity=0.400  Sum_probs=24.9

Q ss_pred             CCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCC
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSS   70 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~   70 (94)
                      ...-|.|+.|+..|.....+.    .... ...|.|+.||.....
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~----~~d~-~~~f~Cp~Cg~~l~~  135 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQ----LLDM-DGTFTCPRCGEELEE  135 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHH----hcCC-CCcEECCCCCCEEEE
Confidence            345788999998888644322    1112 334899999876543

>COG4957 Predicted transcriptional regulator [Transcription]

Probab=81.89  E-value=0.83  Score=25.10  Aligned_cols=25  Identities=32%  Similarity=0.567  Sum_probs=14.5

Q ss_pred             eecCccccccCCHHHHHHHHHHhcCCCC
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSRHGITG   86 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~~~~k~   86 (94)
                      +.|..+|+.|+.   |.+|+.+|.|-.|
T Consensus        77 IicLEDGkkfKS---LKRHL~t~~gmTP  101 (148)
T COG4957          77 IICLEDGKKFKS---LKRHLTTHYGLTP  101 (148)
T ss_pred             EEEeccCcchHH---HHHHHhcccCCCH
Confidence            345566665543   5667666666443

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=81.59  E-value=1.2  Score=28.12  Aligned_cols=57  Identities=21%  Similarity=0.306  Sum_probs=40.7

Q ss_pred             CCCccccccCCCCCCCCcc--cCCCC--CCcccc--ccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166          4 GWKKTAYEIGLGIPAEPLF--RFDRT--KPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~--~h~~~--~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      ..|...+..... ...+..  .|.++  +++.|+  .|++.|.....+..|. ..|....++.+.
T Consensus       293 ~~~~~~~s~~~~-l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  355 (467)
T COG5048         293 KQCNISFSRSSP-LTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHI-LLHTSISPAKEK  355 (467)
T ss_pred             ccccCCcccccc-ccccccccccccccCCceeeeccCCCccccccccccCCc-ccccCCCccccc
Confidence            333334443333 345566  78888  999999  7999999999999998 778876655443

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=80.95  E-value=0.55  Score=20.26  Aligned_cols=29  Identities=24%  Similarity=0.752  Sum_probs=15.4

Q ss_pred             ccccccccccCChHHHHhHHHhhcCCCCCeecCcccc
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGR   66 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~   66 (94)
                      |.|..||..|.....       ... ..+..|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~-------~~~-~~~~~CP~Cg~   34 (42)
T PF09723_consen    6 YRCEECGHEFEVLQS-------ISE-DDPVPCPECGS   34 (42)
T ss_pred             EEeCCCCCEEEEEEE-------cCC-CCCCcCCCCCC
Confidence            567777766654321       111 34566777664

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=80.91  E-value=1.3  Score=19.42  Aligned_cols=11  Identities=27%  Similarity=0.727  Sum_probs=5.8

Q ss_pred             ccccccccccC
Q psy12166         30 HSCDLCGKTYT   40 (94)
Q Consensus        30 ~~c~~c~~~f~   40 (94)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            55555555443

present in RNA polymerase I, II and III

>PF14353 CpXC: CpXC protein

Probab=80.85  E-value=2.7  Score=22.64  Aligned_cols=19  Identities=26%  Similarity=0.614  Sum_probs=12.8

Q ss_pred             CCccccccccccCChHHHH
Q psy12166         28 KPHSCDLCGKTYTLAKHLW   46 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~   46 (94)
                      ..+.|+.||..|.....+.
T Consensus        37 ~~~~CP~Cg~~~~~~~p~l   55 (128)
T PF14353_consen   37 FSFTCPSCGHKFRLEYPLL   55 (128)
T ss_pred             CEEECCCCCCceecCCCEE
Confidence            4677888887776655543

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=80.74  E-value=0.38  Score=21.59  Aligned_cols=11  Identities=27%  Similarity=0.951  Sum_probs=6.1

Q ss_pred             ccccccccccC
Q psy12166         30 HSCDLCGKTYT   40 (94)
Q Consensus        30 ~~c~~c~~~f~   40 (94)
                      |.|..||..|.
T Consensus         6 y~C~~Cg~~fe   16 (52)
T TIGR02605         6 YRCTACGHRFE   16 (52)
T ss_pred             EEeCCCCCEeE
Confidence            45556665554

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=80.58  E-value=1.8  Score=22.66  Aligned_cols=25  Identities=24%  Similarity=0.413  Sum_probs=21.4

Q ss_pred             Cccc----cccccccCChHHHHhHHHhhc
Q psy12166         29 PHSC----DLCGKTYTLAKHLWGHVKSAH   53 (94)
Q Consensus        29 ~~~c----~~c~~~f~~~~~l~~H~~~~h   53 (94)
                      -|.|    ..|++.......+..|.+..|
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            4899    999999999999999985444

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	94
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-05
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		3e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGF 87
          KP++C  CGK+++ + HL  H ++ H G     C  CG++FS   +L  H+R+  G   +
Sbjct: 20 KPYACPECGKSFSRSDHLAEHQRT-HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGF 87
          KP+ C  CGK+++ + +L  H ++ H G     C  CG++FS  ++L +H+R+  G   +
Sbjct: 3  KPYKCPECGKSFSQSSNLQKHQRT-HTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP+ CD C  ++    +L  H K+ H G     CN+CG  F+  ANL  H R
Sbjct: 16 KPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRH 82
          KP  C +C + ++ + HL  H+++ H G     C++CGR F+       H+  +H
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDIQH 55

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	94
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	9e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	3e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-04
3iyl_X	1214	VP3; non-enveloped virus, membrane penetration pro	2e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-04
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	8e-04

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.7 bits (119), Expect = 7e-10
 Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVK--SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
              C++CG T      L  H +  +         C  CG+ F    ++A H+   H 
Sbjct: 6  SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 3e-09
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSA-HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI 84
            + C +C + YT   +   H  ++  +      C  C + F+   N+  H +  H I
Sbjct: 9  HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 44.0 bits (105), Expect = 1e-07
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP+ CD C  ++    +L  H K+ H G     CN+CG  F+  ANL  H R
Sbjct: 16 KPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
             +C++CGK +    HL  H K +H G    +C VCG  F     ++ H R
Sbjct: 6  SGVACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVR 56

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 40.6 bits (96), Expect = 4e-06
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPS--VTCNVCGRTFSSIANLAEHKRSRHGIT 85
          KP+SC +CG  +     +  HV+S H G       C  CG+ FS   +L  H +  H  +
Sbjct: 34 KPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH--S 90

Query: 86 G 86
          G
Sbjct: 91 G 91

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.3 bits (103), Expect = 1e-07
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSS 70
          KP+ C  CGK ++   HL GH+K  H       C V     SS
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 43.6 bits (104), Expect = 4e-07
 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 28 KPHSCDLCGKTYTLAKHLWGH--VKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP  C  CGK Y   ++L  H      ++     TC+VC  TF     L  H  
Sbjct: 34 KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV 87

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITG 86
              C  C K +    +L  H +  H G     C  CG+ +    NL EH+        
Sbjct: 6  SGVECPTCHKKFLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 40.2 bits (95), Expect = 7e-06
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITG 86
           +  +C +C +T+     L  H+ S H G     C+ C + F    +L  H    H  +G
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMVS-HTGEMPYKCSSCSQQFMQKKDLQSHMIKLH--SG 120

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 42.4 bits (101), Expect = 6e-07
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
           PH C++CGK ++    L  H    H G     C  C    +  ++L +H R
Sbjct: 7  GPHKCEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLR 57

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 40.1 bits (95), Expect = 6e-06
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP+ C  C      +  L  H    H       C +C     + + L  H R
Sbjct: 35 KPYKCKTCDYAAADSSSLNKH-LRIHSDERPFKCQICPYASRNSSQLTVHLR 85

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.4 bits (101), Expect = 8e-07
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          K   C  CG+ +T + +L  H +  H      TC++C + F    +L +H+ 
Sbjct: 16 KEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDHRY 66

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.4 bits (101), Expect = 8e-07
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          +P++CD+C K +    HL  H +  H       C  CG+ F     LA HK 
Sbjct: 44 RPYTCDICHKAFRRQDHLRDH-RYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSV----TCNVCGRTFSSIANLAEHKR 79
          KP++C  C KT+   + L  H K  +     V     C+ CG+TF+    +A H  
Sbjct: 14 KPYACSHCDKTFRQKQLLDMHFKR-YHDPNFVPAAFVCSKCGKTFTRRNTMARHAD 68

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 9e-07
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRH 82
          +   C++C + +   +HL  H +S H       C +C R F+    L  H +  H
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRS-HTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 9e-07
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQG--HPSVTCNVCGRTFSSIANLAEHKRSRH 82
          KP+ C +C   +T +  +  H+             C  C    +  ++L  H R +H
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQ-KHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP  C +C + ++ + HL  H+++ H G     C++CGR F+       H +
Sbjct: 33 KPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 39.8 bits (94), Expect = 7e-06
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 28 KPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          +P++C +  C + ++ +  L  H++  H G     C +C R FS   +L  H R
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIR 55

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 41.6 bits (99), Expect = 1e-06
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          +P+ C  CGK +     +  H    H G     C VCG+ FS  +NL  H R
Sbjct: 28 RPYPCQYCGKRFHQKSDMKKH-TFIHTGEKPHKCQVCGKAFSQSSNLITHSR 78

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 36.6 bits (86), Expect = 8e-05
 Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 32 CDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          C +CGK++  +  L  H    H       C  CG+ F   +++ +H  
Sbjct: 4  CKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSDMKKHTF 50

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.9 bits (97), Expect = 2e-06
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP+ C  CGK ++ +  L  H +  H G     C  CG+ FS  + L  H+R
Sbjct: 13 KPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.4 bits (101), Expect = 3e-06
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP++C  CGK+++ + HL  H +  H G     C  CG++FS   +L  H+R
Sbjct: 20 KPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQR 70

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.0 bits (100), Expect = 3e-06
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
           KP+ C  CGK+++   +L  H +  H G     C  CG++FS +A+L  H+R
Sbjct: 76  KPYKCPECGKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQR 126

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.0 bits (100), Expect = 3e-06
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
           KP++C  CGK+++   HL  H +  H G     C  CG++FS   NL  H+R
Sbjct: 104 KPYACPECGKSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQR 154

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 39.7 bits (94), Expect = 2e-05
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
           KP+ C  CGK+++   +L  H +  H G     C  CG++FS    L  H+R
Sbjct: 132 KPYKCPECGKSFSREDNLHTH-QRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 40.6 bits (96), Expect = 3e-06
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP  C +C + ++ + HL  H+++ H G     C++CGR F+       H+ 
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRD 52

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 36.3 bits (85), Expect = 1e-04
 Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 2/52 (3%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP +CD+CG+ +  +     H        P +  +      S   +L     
Sbjct: 30 KPFACDICGRKFARSDERKRHRDI-QHILP-ILEDKVEELLSKNYHLENEVA 79

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 3e-06
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 28 KPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCN--VCGRTFSSIANLAEHKR 79
              CD   CG+ ++  ++L  H K  H    S +C    CG++F+   +L EH +
Sbjct: 6  SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.1 bits (95), Expect = 4e-06
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          + + CD CGK+++ +  L  H +  H G     C+ CG+ F   ++L  H R
Sbjct: 17 RRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.7 bits (94), Expect = 1e-05
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          K + C  CGK++T       H  S H G     C VCG+ F    +L  H +
Sbjct: 9  KLYPCQ-CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 58

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 37.8 bits (89), Expect = 6e-05
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          +P+ C +CGK + +  HL GH+K  H G     CN+C + F    +   H+ 
Sbjct: 36 RPYGCGVCGKKFKMKHHLVGHMKI-HTGIKPYECNICAKRFMWRDSF--HRH 84

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.9 bits (92), Expect = 1e-05
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 27  TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGIT 85
                C LC   ++ +  L  H++       +  C VC + F+S  +  +H   +H I 
Sbjct: 72  ISQFVCPLCLMPFSSSVSLKQHIRYTEH---TKVCPVCKKEFTSTDSALDHVCKKHNIC 127

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.8 bits (87), Expect = 2e-05
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 32 CDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
          C+ CG        L  H+++ H       C  C  +F +  NL +H +S+  
Sbjct: 4  CEECGIRXKKPSMLKKHIRT-HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 39.8 bits (92), Expect = 3e-05
 Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 2/69 (2%)

Query: 27  TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRH-GIT 85
                 +      +      G   +A  GH    C+VC     S  +L  H  S      
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQ-CHVCSAVLFSPLDLDAHVASHGLHGN 208

Query: 86  GFVVSARIN 94
             + S+ I 
Sbjct: 209 MTLTSSEIQ 217

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEHKR 79
          + H C  CGK +  +  L  H    H G     C    CG+ FS   NL  H R
Sbjct: 33 RVHVCAECGKAFVESSKLKRHQLV-HTGEKPFQCTFEGCGKRFSLDFNLRTHVR 85

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%)

Query: 26 RTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
            +  +C    C K +     +  H+ + H G     C  CG+ F   + L  H+ 
Sbjct: 2  EPRTIACPHKGCTKMFRDNSAMRKHLHT-H-GPRVHVCAECGKAFVESSKLKRHQL 55

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 37.1 bits (87), Expect = 7e-05
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEHKRS 80
           T       CGKTYT + HL  H+++ H G     C+   CG  F+    L  H R 
Sbjct: 4  ATHTCDYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 36.3 bits (85), Expect = 8e-05
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           P  C  C  + +    L  H +  H       CN C       +NL++H +  HG
Sbjct: 8  HPEKCSECSYSCSSKAALRIHERI-HCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 38.0 bits (89), Expect = 8e-05
 Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 8/60 (13%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHP--------SVTCNVCGRTFSSIANLAEHKR 79
                 C +T++    L  HV   H G P           C   G++F +   L  H R
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 28 KPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          KP+ CD   C + ++ +  L  H +  H G     C  C R FS   +L  H R
Sbjct: 35 KPYQCDFKDCERRFSRSDQLKRHQRR-HTGVKPFQCKTCQRKFSRSDHLKTHTR 87

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 28  KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEHKR 79
           KP  C  C + ++ + HL  H ++ H G    +C    C + F+    L  H  
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRT-HTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 28 KPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEHKR 79
          +P  C    C K Y    HL  H +  H G     C+   C R FS    L  H+R
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQR 59

>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_C 3k1q_B Length = 1214

 Score = 37.9 bits (87), Expect = 2e-04
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 61  CNVCGRTFSSIANLAEHKRSRHGI--TGFVVSARIN 94
           CNVC   FS+++ L+EH RS H    +  + +  IN
Sbjct: 119 CNVCNARFSTMSALSEHLRSDHRDDASTLLATPMIN 154

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 35.9 bits (82), Expect = 3e-04
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 1/61 (1%)

Query: 22  FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSR 81
           +R D  +  + +    +    + L    +        + C  CG +F S+ +L+ H    
Sbjct: 45  YRDDNHETDNNNPKRWSKPRKRSLLEM-EGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103

Query: 82  H 82
            
Sbjct: 104 K 104

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 36.4 bits (85), Expect = 4e-04
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 28 KPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSVTCN--VCGRTFSSIANLAEHKRSRHG 83
          KP  C    C K +T   HL  H  + H G  + TC+   C   F++ AN+ +H    H 
Sbjct: 41 KPFPCKEEGCEKGFTSLHHLTRHSLT-HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHN 99

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 35.0 bits (80), Expect = 4e-04
 Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 8/57 (14%)

Query: 27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           +   C  CG  +          +S      +  C  C +     A L + + +  G
Sbjct: 16 DRSQKCSKCGIIFIR--------RSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESG 64

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 34.7 bits (80), Expect = 4e-04
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 20 PLFRFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLA 75
          P     R + H C    CGKTY  + HL  H ++ H G    +C+   C R F+    L+
Sbjct: 8  PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT-HTGEKPFSCSWKGCERRFARSDELS 66

Query: 76 EHKRS 80
           H+R+
Sbjct: 67 RHRRT 71

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 13/59 (22%), Positives = 19/59 (32%), Gaps = 7/59 (11%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSA--HQGHPSVTCNVCG-----RTFSSIANLAEHKR 79
               D C + +   + L  H+ S   H       C+  G     R F +   L  H R
Sbjct: 2  TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 34.9 bits (80), Expect = 5e-04
 Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 8/63 (12%)

Query: 26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPS--------VTCNVCGRTFSSIANLAEH 77
                   C +T++    L  HV   H G P           C   G++F +   L  H
Sbjct: 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81

Query: 78 KRS 80
           R 
Sbjct: 82 IRV 84

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 98

 Score = 34.5 bits (78), Expect = 8e-04
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 31 SCDLCGK-TYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG 83
           C  C   T      L  H++   +   ++ C  C + F S A L  H  + H 
Sbjct: 26 VCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS 79

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	94
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.85
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.83
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.82
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.8
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.8
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.79
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.79
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.79
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.78
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.78
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.77
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.76
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.75
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.75
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.75
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.75
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.75
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.75
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.73
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.73
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.72
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.72
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.72
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.72
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.71
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.71
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.7
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.7
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.7
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.7
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.67
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.67
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.66
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.65
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.64
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.6
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.6
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.58
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.58
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.57
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.56
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.56
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.56
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.56
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.55
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.55
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.55
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.55
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.55
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.55
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.55
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.55
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.55
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.55
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.55
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.54
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.54
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.54
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.54
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.54
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.54
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.54
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.54
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.54
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.54
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.54
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.54
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.54
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.54
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.54
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.54
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.53
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.53
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.53
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.53
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.53
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.53
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.53
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.53
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.53
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.53
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.52
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.52
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.52
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.52
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.52
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.51
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.51
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.5
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.5
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.5
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.49
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.49
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.48
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.48
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.48
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.48
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.48
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.48
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.47
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.47
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.47
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.47
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.47
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.47
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.47
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.47
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.47
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.47
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.47
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.46
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.46
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.46
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.46
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.46
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.46
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.46
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.46
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.46
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.46
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.45
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.45
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.45
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.45
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.45
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.45
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.44
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.44
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.44
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.44
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.44
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.44
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.44
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.43
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.43
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.43
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.43
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.42
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.42
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.42
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.41
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.41
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.41
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.41
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.41
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.4
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.4
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.4
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.39
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.39
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.38
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.38
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.37
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.36
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.36
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.34
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.34
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.33
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.31
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.3
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.27
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.26
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.24
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.24
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.23
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.23
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.21
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.21
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.2
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.19
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.19
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.19
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.17
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.16
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.16
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.15
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.15
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.15
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.14
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.14
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.12
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.11
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.1
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	99.1
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	99.09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.08
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.08
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.07
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.04
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.03
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.03
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.01
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.0
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.0
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.98
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.97
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.95
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.92
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.9
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.9
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.9
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.9
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.87
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.84
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.84
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.81
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.81
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.81
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.79
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.78
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.77
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.76
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.75
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.74
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.74
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.74
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.73
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.71
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.68
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.68
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.67
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.1
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.65
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.65
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.64
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.62
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.61
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.61
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.61
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.61
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.61
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.6
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.59
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.59
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.56
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.53
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.52
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.52
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.51
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.89
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.86
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.79
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.4
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.73
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.31
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.26
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.23
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.59
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.39
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.28
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.99
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.72
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.61
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.8
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.57
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.31
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	94.75
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	94.02
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.59
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	89.43
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	89.09
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	88.77
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.16
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	87.99
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	87.44
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	86.8
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	82.82
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	81.93
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	80.96
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	80.11

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.87  E-value=9.9e-23  Score=95.94  Aligned_cols=58  Identities=31%  Similarity=0.628  Sum_probs=55.5

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      |+||.|.+||+.|.....|..|+ .+|++++||.|.+||+.|...+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR-RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-HHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH-HHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            78999999999999999999999 79999999999999999999999999999999975

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=3.3e-24  Score=115.47  Aligned_cols=84  Identities=23%  Similarity=0.345  Sum_probs=60.5

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.|..|+..|.....+ ..|+++|.+++||.|+.|++.|.....|..|+ ..|+++++|.|++|++.|.....|..|+++
T Consensus        23 y~C~~C~k~F~~~~~L-~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~  100 (133)
T 2lt7_A           23 YICIVCKRSYVCLTSL-RRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHE-IHHTGERRYQCLACGKSFINYQFMSSHIKS  100 (133)
T ss_dssp             EEETTTCCEESCHHHH-HHHHHHHHCCSCEECSSSSCEESSHHHHHHHH-HHHHTCCCEEESSSCCEESSHHHHHHHHHH
T ss_pred             eECCCCCCCcCCHHHH-HHHHHHcCCCCCeeCCccCeecccccchhhhc-cccCCCccccCCCCCCCcCCHHHHHHHhHH
Confidence            4577777777664444 45567777777777777777777777777777 577777777777777777777777777777


Q ss_pred             hcCCCC
Q psy12166         81 RHGITG   86 (94)
Q Consensus        81 ~~~~k~   86 (94)
                      +++++|
T Consensus       101 hh~~~p  106 (133)
T 2lt7_A          101 VHSQDP  106 (133)
T ss_dssp             HTCCCT
T ss_pred             hcCCCC
Confidence            766543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=2.2e-22  Score=108.37  Aligned_cols=76  Identities=17%  Similarity=0.268  Sum_probs=70.1

Q ss_pred             CCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         15 GIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        15 ~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ....++..+|.|+++|.|++|++.|.....|..|+ ..|+++++|.|.+|++.|.....|..|+++|.|++||.|+.
T Consensus         8 ~h~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   83 (133)
T 2lt7_A            8 KHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHF-NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA   83 (133)
T ss_dssp             CCSSEEEEEETTEEEEEETTTCCEESCHHHHHHHH-HHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESS
T ss_pred             HHHhhceeecCCCcCeECCCCCCCcCCHHHHHHHH-HHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCC
Confidence            33456677889999999999999999999999999 78999999999999999999999999999999999999964

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=3.8e-21  Score=94.55  Aligned_cols=70  Identities=24%  Similarity=0.500  Sum_probs=65.5

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      .....+.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus         8 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            8 RSEWQQRERRRYKCDECGKSFSHSSDLSKHR-RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCcCcCCCCCCEECCCCCcccCCHHHHHHHH-HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4456677889999999999999999999999 789999999999999999999999999999999999988

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.85  E-value=2.4e-22  Score=104.05  Aligned_cols=87  Identities=21%  Similarity=0.404  Sum_probs=78.3

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.|..|+..|.....+ ..|++.|.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++
T Consensus        18 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   95 (106)
T 2ee8_A           18 FICKFCGRHFTKSYNL-LIHERTHTDERPYTCDICHKAFRRQDHLRDHR-YIHSKEKPFKCQECGKGFCQSRTLAVHKTL   95 (106)
T ss_dssp             CBCSSSCCBCSSHHHH-HHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHG-GGSCCCCTTSCSSSCCCCSSHHHHHHHHHH
T ss_pred             eECCCCCCccCCHHHH-HHHHHHcCCCCCcCCCCccchhCCHHHHHHHH-HHhCCCCCeECCCcCCcccCHHHHHHHHHH
Confidence            5789998888765444 56788899999999999999999999999998 789999999999999999999999999999


Q ss_pred             hcCCCCceE
Q psy12166         81 RHGITGFVV   89 (94)
Q Consensus        81 ~~~~k~~~C   89 (94)
                      |.++++|..
T Consensus        96 H~~~~~~~~  104 (106)
T 2ee8_A           96 HMQTSSPTA  104 (106)
T ss_dssp             TTSCCCCCC
T ss_pred             hCCCCCCcC
Confidence            999999865

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=9.6e-21  Score=97.71  Aligned_cols=70  Identities=20%  Similarity=0.212  Sum_probs=63.6

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhc---CCCCCeecCccccccCCHHHHHHH-HHHhcCCCCceEee
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAH---QGHPSVTCNVCGRTFSSIANLAEH-KRSRHGITGFVVSA   91 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h---~~~~~~~c~~C~~~f~~~~~l~~h-~~~~~~~k~~~C~~   91 (94)
                      ....+++||.|..|++.|.....|..|++..|   .++++|.|.+|++.|.....|..| +++|.|++||+|+.
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            34568899999999999999999999984468   668999999999999999999999 89999999999974

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.4e-21  Score=103.42  Aligned_cols=90  Identities=23%  Similarity=0.379  Sum_probs=79.0

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHh--hcCCCCCeecCccccccCCHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKS--AHQGHPSVTCNVCGRTFSSIANLAEHK   78 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~--~h~~~~~~~c~~C~~~f~~~~~l~~h~   78 (94)
                      |.|..|+..|.....+ ..|++.|.++++|.|..|++.|.....|..|++.  .+.++++|.|.+|++.|.....|..|+
T Consensus         8 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   86 (124)
T 2dlq_A            8 VECPTCHKKFLSKYYL-KVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM   86 (124)
T ss_dssp             CCCTTTCCCCSSHHHH-HHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCcCCCHHHH-HHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHH
Confidence            5799999888775554 5678889999999999999999999999999843  357789999999999999999999999


Q ss_pred             HHhcCCCCceEee
Q psy12166         79 RSRHGITGFVVSA   91 (94)
Q Consensus        79 ~~~~~~k~~~C~~   91 (94)
                      ++|.++++|+|+.
T Consensus        87 ~~h~~~~~~~C~~   99 (124)
T 2dlq_A           87 VSHTGEMPYKCSS   99 (124)
T ss_dssp             HHHSSSCSEECSS
T ss_pred             HHcCCCCCccCCC
Confidence            9999999999863

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=2.8e-21  Score=98.40  Aligned_cols=85  Identities=19%  Similarity=0.309  Sum_probs=75.2

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.|..|+..|.....+ ..|++.|.++++|.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++
T Consensus         9 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   86 (96)
T 2dmd_A            9 HKCEVCGKCFSRKDKL-KTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-RIHSDERPFKCQICPYASRNSSQLTVHLRS   86 (96)
T ss_dssp             CCBTTTTBCCCCHHHH-HHHGGGCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCCCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             eECCCCCCccCCHHHH-HHHHHhcCCCCCEeCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHHHHH
Confidence            5788998888775444 56788899999999999999999999999998 789999999999999999999999999999


Q ss_pred             hcCCCCc
Q psy12166         81 RHGITGF   87 (94)
Q Consensus        81 ~~~~k~~   87 (94)
                      |+++++.
T Consensus        87 h~~~~~p   93 (96)
T 2dmd_A           87 HTGDSGP   93 (96)
T ss_dssp             CCSCCCC
T ss_pred             hcCCCCC
Confidence            9988754

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.82  E-value=5.4e-22  Score=108.74  Aligned_cols=87  Identities=20%  Similarity=0.436  Sum_probs=64.1

Q ss_pred             CCCCCccccccCCCCCCCCcccCCCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecCc--cccccCCHHHHHHH
Q psy12166          2 DCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEH   77 (94)
Q Consensus         2 ~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~~--C~~~f~~~~~l~~h   77 (94)
                      .|..|+..|.....+ ..|++.|.++++|.|..  |++.|.....|..|+ ..|.++++|.|.+  |++.|.....|..|
T Consensus        64 ~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~k~f~~~~~L~~H  141 (155)
T 2rpc_A           64 ECPREGKSFKAKYKL-VNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK-RTHTGEKPFKCEFEGCDRRFANSSDRKKH  141 (155)
T ss_dssp             TCTTSSCCCSSHHHH-HHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHH-TTTCSSCSBCCSSTTCCCCBSSHHHHHHS
T ss_pred             CCCCcccccCCHHHH-HHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHH-HhhCCCCCccCCCCCCCCccCCHHHHHHH
Confidence            466666666553333 45666777777888877  888888888888887 6777777888876  88888888888888


Q ss_pred             HHHhcCCCCceEe
Q psy12166         78 KRSRHGITGFVVS   90 (94)
Q Consensus        78 ~~~~~~~k~~~C~   90 (94)
                      +++|++++||+|+
T Consensus       142 ~~~H~~~k~~~c~  154 (155)
T 2rpc_A          142 MHVHTSDKSGPSS  154 (155)
T ss_dssp             STTTTSCCCSCSC
T ss_pred             HHHhcCCCCCCCC
Confidence            8888888888775

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=1.1e-21  Score=103.28  Aligned_cols=87  Identities=24%  Similarity=0.450  Sum_probs=78.2

Q ss_pred             CCCCC--CccccccCCCCCCCCcccCCCCCCcccc--ccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHH
Q psy12166          1 MDCGW--KKTAYEIGLGIPAEPLFRFDRTKPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAE   76 (94)
Q Consensus         1 ~~C~~--~~~~~~~~~~~~~~~~~~h~~~~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~   76 (94)
                      |.|.+  |+..|.....+ ..|++.|.++++|.|.  .|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..
T Consensus         7 ~~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~   84 (119)
T 2jp9_A            7 FMCAYPGCNKRYFKLSHL-QMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSRSDHLKT   84 (119)
T ss_dssp             BCCCSTTSCCCBSCHHHH-HHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             eeCCCCCCcchhCCHHHH-HHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHH-HHcCCCCCccCCccCchhCCHHHHHH
Confidence            56887  88877765444 5677889899999999  7999999999999999 68999999999999999999999999


Q ss_pred             HHHHhcCCCCceE
Q psy12166         77 HKRSRHGITGFVV   89 (94)
Q Consensus        77 h~~~~~~~k~~~C   89 (94)
                      |+++|.++++|+|
T Consensus        85 H~~~h~~~~~~~C   97 (119)
T 2jp9_A           85 HTRTHTGEKPFSC   97 (119)
T ss_dssp             HHHHHHTCCCEEC
T ss_pred             HHHHhcCCCCeeC
Confidence            9999999999999

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.82  E-value=6.1e-20  Score=89.56  Aligned_cols=65  Identities=31%  Similarity=0.620  Sum_probs=60.8

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCc
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGF   87 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~   87 (94)
                      ..+.++++|.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|++++||
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHH-HHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHH-HHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4566789999999999999999999999 7899999999999999999999999999999999987

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.81  E-value=1.5e-19  Score=90.19  Aligned_cols=74  Identities=23%  Similarity=0.392  Sum_probs=66.9

Q ss_pred             CCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCC----CCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         17 PAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGH----PSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        17 ~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~----~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +..|+++|.++++|.|..|++.|.....|..|+ ..+...    ++|.|.+|++.|.....|..|+++|++++++.|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~-~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHF-KRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHH-HHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHH-HHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            467899999999999999999999999999998 445443    78999999999999999999999999999998864

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=2.4e-21  Score=96.00  Aligned_cols=81  Identities=28%  Similarity=0.615  Sum_probs=71.2

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.|..|+..+.....+ ..|++.|.++++|.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++
T Consensus         2 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTL-STHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             EECSSSCCEESSHHHH-HHHHHHHHTCCCEECSSSCCEESSHHHHHHHH-HHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             ccCCCCcccccCchhH-HHHHHHcCCCCCeeCCcCChhhCCHHHHHHHH-HHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            4688998888775554 56778888899999999999999999999998 789999999999999999999999999999


Q ss_pred             hcC
Q psy12166         81 RHG   83 (94)
Q Consensus        81 ~~~   83 (94)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=2.4e-21  Score=97.55  Aligned_cols=84  Identities=19%  Similarity=0.477  Sum_probs=69.8

Q ss_pred             CCCCC--CccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHH
Q psy12166          1 MDCGW--KKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHK   78 (94)
Q Consensus         1 ~~C~~--~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~   78 (94)
                      |.|.+  |+..|.....+ ..|++.|.++++|.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+
T Consensus         5 ~~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~   82 (90)
T 1a1h_A            5 YACPVESCDRRFSQSGSL-TRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHT   82 (90)
T ss_dssp             EECCSSSCCCEESSHHHH-HHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             eECCCCCCCCccCCHHHH-HHHHHHhCCCCCccCCCCCcccCCHHHHHHHH-HHcCCCCCccCCCCCchhCCHHHHHHHH
Confidence            35764  77777664443 56778888889999999999999999999998 6899999999999999999999999999


Q ss_pred             HHhcCCCC
Q psy12166         79 RSRHGITG   86 (94)
Q Consensus        79 ~~~~~~k~   86 (94)
                      ++|+++++
T Consensus        83 ~~H~~~k~   90 (90)
T 1a1h_A           83 KIHLRQKD   90 (90)
T ss_dssp             GGGGC---
T ss_pred             HHhcccCC
Confidence            99998763

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.80  E-value=2.8e-21  Score=108.96  Aligned_cols=87  Identities=25%  Similarity=0.512  Sum_probs=58.1

Q ss_pred             CCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHh
Q psy12166          2 DCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus         2 ~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~   81 (94)
                      .|..|+..+.....+ ..|+..|.++++|.|+.|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|
T Consensus        79 ~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  156 (190)
T 2i13_A           79 KCPECGKSFSQRANL-RAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ-RTHTGEKPYKCPECGKSFSREDNLHTHQRTH  156 (190)
T ss_dssp             ECTTTCCEESCHHHH-HHHHHHHHTCCCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCcccCCccCCHHHH-HHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            456666555543332 34556666667777777777777777777776 5666677777777777777777777777777


Q ss_pred             cCCCCceEe
Q psy12166         82 HGITGFVVS   90 (94)
Q Consensus        82 ~~~k~~~C~   90 (94)
                      .++++|+|+
T Consensus       157 ~~~~~~~C~  165 (190)
T 2i13_A          157 TGEKPYKCP  165 (190)
T ss_dssp             HCCCCEECT
T ss_pred             CCCCCeECC
Confidence            777777764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=2.6e-19  Score=86.44  Aligned_cols=65  Identities=22%  Similarity=0.306  Sum_probs=61.0

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCce
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFV   88 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~   88 (94)
                      .|.++++|.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|++++|..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHE-RIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            467789999999999999999999999 78999999999999999999999999999999998864

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=7.8e-19  Score=86.19  Aligned_cols=67  Identities=19%  Similarity=0.399  Sum_probs=61.0

Q ss_pred             CCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCC-CCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         17 PAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGH-PSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        17 ~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~-~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      +..|+++|.+++||.|.+|++.|.....|..|++..|..+ ++|.|.+|++.|.....|..|++++++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999984478875 899999999999999999999998664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.79  E-value=2.4e-20  Score=98.77  Aligned_cols=87  Identities=25%  Similarity=0.474  Sum_probs=74.2

Q ss_pred             CCCC--CCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCc--cccccCCHHHHHH
Q psy12166          1 MDCG--WKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAE   76 (94)
Q Consensus         1 ~~C~--~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~--C~~~f~~~~~l~~   76 (94)
                      |.|.  .|+..|.....+ ..|+..| ++++|.|..|++.|.....|..|+ ..|.++++|.|.+  |++.|.....|..
T Consensus         6 ~~C~~~~C~~~f~~~~~l-~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            6 IACPHKGCTKMFRDNSAM-RKHLHTH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             EECCSTTCCCEESSHHHH-HHHHGGG-SCCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             ccCCCCCCcCccCCHHHH-HHHHHHc-CCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            4577  577777664443 4667778 778999999999999999999998 7899999999986  9999999999999


Q ss_pred             HHHHhcCCCCceEe
Q psy12166         77 HKRSRHGITGFVVS   90 (94)
Q Consensus        77 h~~~~~~~k~~~C~   90 (94)
                      |+++|.++++|.|.
T Consensus        83 H~~~h~~~~~~~C~   96 (124)
T 1ubd_C           83 HVRIHTGDRPYVCP   96 (124)
T ss_dssp             HHHHHHCCCCCCCC
T ss_pred             HHHHhCCCCceECC
Confidence            99999999999984

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.79  E-value=5.2e-19  Score=85.84  Aligned_cols=67  Identities=27%  Similarity=0.465  Sum_probs=61.8

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITG   86 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~   86 (94)
                      .+.++|.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|+++.+
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHH-HhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            3467889999999999999999999999999 789999999999999999999999999999988653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=3.7e-20  Score=94.86  Aligned_cols=74  Identities=19%  Similarity=0.249  Sum_probs=67.5

Q ss_pred             CCCCCCcccCCCCCCccccccccccC-ChHHHHhHHHhhcCC-CCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         15 GIPAEPLFRFDRTKPHSCDLCGKTYT-LAKHLWGHVKSAHQG-HPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        15 ~~~~~~~~~h~~~~~~~c~~c~~~f~-~~~~l~~H~~~~h~~-~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      .....|+++|.++++|.|.+|++.|. ....|..|+ ..|.+ +++|.|.+|++.|.....|..|+++|++++|+.-
T Consensus        10 ~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~-~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           10 GPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHM-EVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHH-HHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             CcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHH-HHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            34467888999999999999999999 999999999 68888 8999999999999999999999999999998653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=8.5e-21  Score=98.47  Aligned_cols=85  Identities=18%  Similarity=0.156  Sum_probs=66.4

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHH-
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR-   79 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~-   79 (94)
                      |.|..|+..|.....+ ..|++.|  +++|.|.+|++.|.....|..|+ . |.++++|.|.+|++.|.....|..|++ 
T Consensus        17 ~~C~~C~~~f~~~~~l-~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~   91 (107)
T 1wjp_A           17 YQCRLCNAKLSSLLEQ-GSHERLC--RNAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTFKSSFSIWRHQVE   91 (107)
T ss_dssp             CBCTTTCCBCSSHHHH-HHHHHHH--HHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEECSSHHHHHHHHHH
T ss_pred             eECCCCCCccCCHHHH-HHHHHHC--CCCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchhCCHHHHHHHHHH
Confidence            5677887777664443 4556666  36788888888888888888887 5 888888888888888888888888886 


Q ss_pred             HhcCCCCceEe
Q psy12166         80 SRHGITGFVVS   90 (94)
Q Consensus        80 ~~~~~k~~~C~   90 (94)
                      +|.++++|.++
T Consensus        92 ~H~~~~~~~~~  102 (107)
T 1wjp_A           92 VHNQNNMAPTS  102 (107)
T ss_dssp             TSCCCCCCCCC
T ss_pred             HcCCCCCCCCC
Confidence            78888888775

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.78  E-value=5.2e-20  Score=103.76  Aligned_cols=88  Identities=28%  Similarity=0.504  Sum_probs=49.9

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.|..|+..+.....+ ..|++.|.++++|.|+.|++.|.....|..|+ ..|.++++|.|++|++.|.....|..|+++
T Consensus        22 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           22 YACPECGKSFSRSDHL-AEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             ---------CCSSHHH-HHGGGCC---CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHH-HHHHHHcCCCCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccCcccCCccCCHHHHHHHHHh
Confidence            3566666666554333 44566666667777777777777777777776 566666667777676666666666666666


Q ss_pred             hcCCCCceEe
Q psy12166         81 RHGITGFVVS   90 (94)
Q Consensus        81 ~~~~k~~~C~   90 (94)
                      |.++++|.|+
T Consensus       100 h~~~~~~~C~  109 (190)
T 2i13_A          100 HTGEKPYACP  109 (190)
T ss_dssp             HHTCCCEECT
T ss_pred             cCCCCCCcCC
Confidence            6666666664

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.3e-19  Score=91.93  Aligned_cols=82  Identities=23%  Similarity=0.467  Sum_probs=68.0

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCC--CCeecCccccccCCHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGH--PSVTCNVCGRTFSSIANLAEHK   78 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~--~~~~c~~C~~~f~~~~~l~~h~   78 (94)
                      |.|..|+..|.....+ ..|+..|.++++|.|..|++.|.....|..|+ ..|.++  ++|.|.+|++.|.....|..|+
T Consensus         8 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~   85 (95)
T 2yt9_A            8 VACEICGKIFRDVYHL-NRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKPYICQSCGKGFSRPDHLNGHI   85 (95)
T ss_dssp             EECSSSCCEESSSHHH-HHHHHHSCSSCSEECSSSCCEESCHHHHHHHH-HHHCCCCCSSBCCSSSCCCBSSHHHHHHHH
T ss_pred             eECCCCCCccCChHHH-HHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH-HHhcCCCCCceECCCccchhCCHHHHHHHH
Confidence            4688888888775554 56778888889999999999999999999998 677776  8899999999999999999998


Q ss_pred             H-HhcCC
Q psy12166         79 R-SRHGI   84 (94)
Q Consensus        79 ~-~~~~~   84 (94)
                      + .|.++
T Consensus        86 ~~~H~~~   92 (95)
T 2yt9_A           86 KQVHSGP   92 (95)
T ss_dssp             HHTSCCC
T ss_pred             HHhcCCC
Confidence            6 56654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.76  E-value=5.6e-20  Score=97.38  Aligned_cols=86  Identities=23%  Similarity=0.417  Sum_probs=71.5

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecC--ccccccCCHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCN--VCGRTFSSIANLAE   76 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~--~C~~~f~~~~~l~~   76 (94)
                      |.|..|+..|.....+ ..|+..|.++++|.|..  |++.|.....|..|+ ..|.++++|.|+  .|++.|.....|..
T Consensus        35 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~  112 (124)
T 1ubd_C           35 HVCAECGKAFVESSKL-KRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKS  112 (124)
T ss_dssp             EECTTTCCEESSHHHH-HHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHH-HHHHCCCCCCCCSTTCCCCCSSTTTTHH
T ss_pred             eECCCCCchhCCHHHH-HHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHH-HHhCCCCceECCCCCCCCccCCHHHHHH
Confidence            4688898888775554 56788999999999986  999999999999999 789999999996  49999999999999


Q ss_pred             HHHHhcCCCCce
Q psy12166         77 HKRSRHGITGFV   88 (94)
Q Consensus        77 h~~~~~~~k~~~   88 (94)
                      |+++|++++++.
T Consensus       113 H~~~H~~~k~~q  124 (124)
T 1ubd_C          113 HILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHC------
T ss_pred             HHHHHcccccCC
Confidence            999999998863

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=4e-18  Score=86.57  Aligned_cols=67  Identities=24%  Similarity=0.520  Sum_probs=63.2

Q ss_pred             CCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         24 FDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        24 h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|.++++|+|+.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   69 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI   69 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHG-GGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSS
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHH-HhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCC
Confidence            46788999999999999999999999 78999999999999999999999999999999999999964

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.4e-18  Score=82.84  Aligned_cols=63  Identities=21%  Similarity=0.463  Sum_probs=57.0

Q ss_pred             cccCCCCCCccccccccccCChHHHHhHHHhhc-CCCCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         21 LFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAH-QGHPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        21 ~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h-~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      +++|.+++||.|+.|++.|.....|..|++..| .++++|.|+.|++.|.....|..|++++++
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            467888999999999999999999999994348 689999999999999999999999999886

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.75  E-value=1.6e-19  Score=98.92  Aligned_cols=88  Identities=20%  Similarity=0.339  Sum_probs=74.9

Q ss_pred             CCCCCCccccccCCCCCCCCccc-CCCCCC--------ccccccccccCChHHHHhHHHhhcCCCCCeecCc--cccccC
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFR-FDRTKP--------HSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFS   69 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~-h~~~~~--------~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~--C~~~f~   69 (94)
                      |.|..|+..|.....+ ..|++. |.++.+        |.|..|++.|.....|..|+ ..|.++++|.|.+  |++.|.
T Consensus        26 ~~C~~C~~~f~~~~~L-~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           26 RPKKSCDRTFSTMHEL-VTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             SSCCCCCCCBSSHHHH-HHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHT-HHHHCCCSEECSCTTTCCEES
T ss_pred             cccccCCcccCCHHHH-HHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHH-HhcCCCCcccCCcCCCCCccC
Confidence            3566688888775554 355555 666554        89999999999999999999 6899999999998  999999


Q ss_pred             CHHHHHHHHHHhcCCCCceEe
Q psy12166         70 SIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        70 ~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      ....|..|+++|.++++|+|+
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~  124 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCE  124 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCS
T ss_pred             CHHHHHHHHHhhCCCCCccCC
Confidence            999999999999999999986

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.75  E-value=5.7e-18  Score=84.67  Aligned_cols=67  Identities=21%  Similarity=0.320  Sum_probs=59.4

Q ss_pred             CCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHH-HhcCCC
Q psy12166         18 AEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR-SRHGIT   85 (94)
Q Consensus        18 ~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~-~~~~~k   85 (94)
                      ...+..+.+.++|.|++|++.|.....|..|+ ..|++++||.|.+|++.|.....|..|++ .|.+|.
T Consensus        17 ~~~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           17 AGVLGLSASAECHLCPVCGESFASKGAQERHL-RLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSCCSSCCCCTTEECTTSCCEESSHHHHHHHH-HTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCCCCEECCCCCCCcCcHHHHhhhh-hhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34456777889999999999999999999999 78999999999999999999999999975 576653

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.75  E-value=4.8e-19  Score=99.80  Aligned_cols=89  Identities=17%  Similarity=0.287  Sum_probs=64.8

Q ss_pred             CCC--CCCccccccCCCCCCCCcccCCCCCCcccc--ccccccCChHHHHhHHHhhc-CCCCCeec--CccccccCCHHH
Q psy12166          1 MDC--GWKKTAYEIGLGIPAEPLFRFDRTKPHSCD--LCGKTYTLAKHLWGHVKSAH-QGHPSVTC--NVCGRTFSSIAN   73 (94)
Q Consensus         1 ~~C--~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~--~c~~~f~~~~~l~~H~~~~h-~~~~~~~c--~~C~~~f~~~~~   73 (94)
                      |.|  ..|+..|.....+ ..|++.|.++++|.|.  .|++.|.....|..|++..| .+.++|.|  ..|++.|.....
T Consensus        43 ~~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~  121 (190)
T 1tf6_A           43 FPCKEEGCEKGFTSLHHL-TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ  121 (190)
T ss_dssp             SCCSSTTCCCCCSSHHHH-HHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHH
T ss_pred             ccCCCCCCChhhCCHHHH-HHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHH
Confidence            356  5566666554333 4566777777788887  78888888888888875556 45677888  778888888888


Q ss_pred             HHHHHHHhcCCCCceEe
Q psy12166         74 LAEHKRSRHGITGFVVS   90 (94)
Q Consensus        74 l~~h~~~~~~~k~~~C~   90 (94)
                      |..|+++|.+++||+|+
T Consensus       122 L~~H~~~H~~~~~~~C~  138 (190)
T 1tf6_A          122 LKVHQFSHTQQLPYECP  138 (190)
T ss_dssp             HHHHHGGGSSSCSSBCC
T ss_pred             HHHHHHHhCCCCCccCC
Confidence            88888888888888875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=3.1e-18  Score=84.21  Aligned_cols=67  Identities=24%  Similarity=0.518  Sum_probs=61.8

Q ss_pred             CCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecCc--cccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         25 DRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        25 ~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +++++|.|..  |++.|.....|..|++..|.++++|.|.+  |++.|.....|..|+++|+++++|+|+.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   73 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   73 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC
Confidence            4678999997  99999999999999943799999999999  9999999999999999999999999974

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.4e-19  Score=98.94  Aligned_cols=73  Identities=27%  Similarity=0.597  Sum_probs=56.9

Q ss_pred             CCCcccCCCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecCc--cccccCCHHHHHHHH-HHhcCCCCceEee
Q psy12166         18 AEPLFRFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEHK-RSRHGITGFVVSA   91 (94)
Q Consensus        18 ~~~~~~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~~--C~~~f~~~~~l~~h~-~~~~~~k~~~C~~   91 (94)
                      ..|++.|.++++|.|.+  |++.|.....|..|+ ..|.++++|.|++  |++.|.....|..|+ ++|.++++|+|+.
T Consensus        56 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  133 (155)
T 2gli_A           56 VVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL  133 (155)
T ss_dssp             HHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHH-HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCS
T ss_pred             HHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHH-HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCC
Confidence            45667777778888874  888888888888887 5788888888887  888888888888887 6788888888753

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=2.9e-19  Score=91.40  Aligned_cols=80  Identities=25%  Similarity=0.471  Sum_probs=50.5

Q ss_pred             CCCC--CccccccCCCCCCCCcccCCCCCCcccc--ccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHH
Q psy12166          2 DCGW--KKTAYEIGLGIPAEPLFRFDRTKPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEH   77 (94)
Q Consensus         2 ~C~~--~~~~~~~~~~~~~~~~~~h~~~~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h   77 (94)
                      .|.+  |+..|.....+ ..|++.|.++++|.|.  .|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|
T Consensus        17 ~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H   94 (100)
T 2ebt_A           17 YCDYPGCTKVYTKSSHL-KAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY-RKHTGAKPFQCGVCNRSFSRSDHLALH   94 (100)
T ss_dssp             ECCSSSCCCEESCHHHH-HHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHH-HHHTSCCSCBCSSSCCBCSSHHHHHHH
T ss_pred             EcCCCCCCCcccCHHHH-HHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCcCccCCHHHHHHH
Confidence            4555  55555443332 4555666666677774  4777777777777776 566666677777777777777777777


Q ss_pred             HHHhcC
Q psy12166         78 KRSRHG   83 (94)
Q Consensus        78 ~~~~~~   83 (94)
                      +++|.+
T Consensus        95 ~~~H~~  100 (100)
T 2ebt_A           95 MKRHQN  100 (100)
T ss_dssp             HHHHCC
T ss_pred             HHHhCC
Confidence            766653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=2.3e-19  Score=90.03  Aligned_cols=79  Identities=28%  Similarity=0.522  Sum_probs=62.9

Q ss_pred             CCCCC--CccccccCCCCCCCCcccCCCCCCcccc--ccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHH
Q psy12166          1 MDCGW--KKTAYEIGLGIPAEPLFRFDRTKPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAE   76 (94)
Q Consensus         1 ~~C~~--~~~~~~~~~~~~~~~~~~h~~~~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~   76 (94)
                      |.|.+  |+..+.....+ ..|++.|.++++|.|+  .|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..
T Consensus         6 ~~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            6 HTCDYAGCGKTYTKSSHL-KAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY-RKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             EECCSTTTCCEESSHHHH-HHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             eeCCCCCCCCcCCCHHHH-HHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCcccCCHHHHHH
Confidence            45777  77777664443 5667778888888886  5888888888888888 67888888888888888888888888


Q ss_pred             HHHHh
Q psy12166         77 HKRSR   81 (94)
Q Consensus        77 h~~~~   81 (94)
                      |+++|
T Consensus        84 H~~~H   88 (89)
T 2wbs_A           84 HMKRH   88 (89)
T ss_dssp             HGGGG
T ss_pred             HHHhh
Confidence            88876

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.8e-18  Score=88.31  Aligned_cols=65  Identities=29%  Similarity=0.538  Sum_probs=33.2

Q ss_pred             CCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         24 FDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        24 h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      |.++++|.| .|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|.++++|+|+
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   69 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN   69 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECS
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHH-HHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCC
Confidence            344455555 4555555555555554 3444455555555555555555555555555555555543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.73  E-value=5.5e-18  Score=78.58  Aligned_cols=57  Identities=23%  Similarity=0.455  Sum_probs=50.4

Q ss_pred             CCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      ++++|.|..|++.|.....|..|+ ..|.++++|.|++|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHL-RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHH-HHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHH-HHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            468999999999999999999999 689999999999999999999999999999874

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=6.2e-19  Score=91.69  Aligned_cols=80  Identities=23%  Similarity=0.465  Sum_probs=70.7

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.| .|+..|.....+ ..|++.|.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++
T Consensus        11 ~~C-~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A           11 YPC-QCGKSFTHKSQR-DRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM-KIHTGIKPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             EEC-TTSCEESSHHHH-HHHHHHHSCCCSEECTTTSCEESSSHHHHHHH-TTTCCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             Eec-cCCCccCCHHHH-HHHHHHcCCCcCccCCCCCcccCCHHHHHHHH-HHcCCCCCeeCCCCcchhcCHHHHHHHHHH
Confidence            468 788877764443 56788899999999999999999999999999 789999999999999999999999999998


Q ss_pred             hcC
Q psy12166         81 RHG   83 (94)
Q Consensus        81 ~~~   83 (94)
                      |++
T Consensus        88 ~~~   90 (110)
T 2csh_A           88 CTK   90 (110)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.72  E-value=1.8e-17  Score=76.78  Aligned_cols=56  Identities=23%  Similarity=0.459  Sum_probs=53.5

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      ||.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHH-HhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            689999999999999999999 78999999999999999999999999999998876

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.8e-17  Score=83.99  Aligned_cols=66  Identities=27%  Similarity=0.596  Sum_probs=61.8

Q ss_pred             CCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCC--CCceEee
Q psy12166         25 DRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI--TGFVVSA   91 (94)
Q Consensus        25 ~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~--k~~~C~~   91 (94)
                      .++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|+++  ++|+|+.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   70 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS   70 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHH-HHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSS
T ss_pred             CCCCCeECCCCCCccCChHHHHHHH-HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCC
Confidence            4678999999999999999999999 7899999999999999999999999999999987  8999863

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=2.9e-18  Score=87.57  Aligned_cols=69  Identities=17%  Similarity=0.289  Sum_probs=60.3

Q ss_pred             CCcccCCCCCCcccccccccc-CChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHH-HHHhcCCCCceE
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTY-TLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEH-KRSRHGITGFVV   89 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f-~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h-~~~~~~~k~~~C   89 (94)
                      .+.+.+.++++|.|..|++.| .....|..|+ ..| ++++|.|.+|++.|.....|..| +++|.++..+.+
T Consensus        24 ~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~-~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           24 QWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHM-ENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HHHHHHHHTSCEECTTTCSCEESSHHHHHHHH-HHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             HHHHHhcCCCCcCCCCCCCCcccCHHHHHHHH-HHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            445567788999999999999 9999999999 688 99999999999999999999999 888887544444

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=8.8e-19  Score=91.75  Aligned_cols=74  Identities=14%  Similarity=0.084  Sum_probs=54.5

Q ss_pred             CCCCCcccCCCCCCccccccccccCChHHHHhHHHhh--cCCCCCee-cCcccccc--CCHHHHHHHHHHhcCCCCceEe
Q psy12166         16 IPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSA--HQGHPSVT-CNVCGRTF--SSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        16 ~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~--h~~~~~~~-c~~C~~~f--~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .+..|+++|.++++|.|..|++.|.....|..|+ ..  |...+++. |.+|++.|  .....|..|+++|.+++||.|+
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHM-NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHH-HHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHH-HHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            3467778888888888888888888888888888 45  55454443 77777776  6667777777777777777765

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.72  E-value=4e-17  Score=84.25  Aligned_cols=68  Identities=22%  Similarity=0.471  Sum_probs=63.1

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ...++++|.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|.++++|+|..
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   78 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE   78 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHH-HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSS
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCC
Confidence            345678999999999999999999999 78999999999999999999999999999999999999964

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=2.7e-18  Score=90.65  Aligned_cols=83  Identities=19%  Similarity=0.352  Sum_probs=70.3

Q ss_pred             CCCCCCccccccCCCCCCCCcc---cCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLF---RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEH   77 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~---~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h   77 (94)
                      |.|..|+..|.....+ ..|+.   .+.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|
T Consensus        36 ~~C~~C~~~f~~~~~l-~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H  113 (124)
T 2dlq_A           36 FECPKCGKCYFRKENL-LEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM-VSHTGEMPYKCSSCSQQFMQKKDLQSH  113 (124)
T ss_dssp             CBCTTTCCBCSSHHHH-HHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHH-HHHSSSCSEECSSSCCEESSHHHHHHH
T ss_pred             eECCCCCchhcCHHHH-HHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCccCCCccchhCCHHHHHHH
Confidence            5799999888775554 34444   356789999999999999999999999 789999999999999999999999999


Q ss_pred             HHH-hcCCC
Q psy12166         78 KRS-RHGIT   85 (94)
Q Consensus        78 ~~~-~~~~k   85 (94)
                      ++. |.+++
T Consensus       114 ~~~~H~~~~  122 (124)
T 2dlq_A          114 MIKLHSGPS  122 (124)
T ss_dssp             HHHTSSCSS
T ss_pred             HHHHCCCCC
Confidence            985 65543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.71  E-value=1.4e-17  Score=83.61  Aligned_cols=65  Identities=26%  Similarity=0.598  Sum_probs=59.6

Q ss_pred             CCCCcccc--ccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         26 RTKPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        26 ~~~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ++++|.|+  .|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|+++|.++++|.|+.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   67 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI   67 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCC
Confidence            36899998  5999999999999999 78999999999999999999999999999999999999863

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.71  E-value=3.3e-17  Score=83.07  Aligned_cols=63  Identities=25%  Similarity=0.403  Sum_probs=58.3

Q ss_pred             CCCccccccccccCChHHHHhHHHhh-cCCCCC--------eecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSA-HQGHPS--------VTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~-h~~~~~--------~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      ...++|..|++.|.....|..|+ .. |.++++        |.|.+|++.|.....|..|+++|++++||+|+
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~-~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHV-TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHH-HHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cCCCcccccccccCCHHHHHHHH-HHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            45688999999999999999999 55 988877        99999999999999999999999999999996

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=3e-17  Score=85.00  Aligned_cols=70  Identities=14%  Similarity=0.205  Sum_probs=63.3

Q ss_pred             CCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         18 AEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        18 ~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ...++.|.++++|.|..|++.|.....|..|+ ..|  .++|.|.+|++.|.....|..|+. |.++++|+|+.
T Consensus         5 ss~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~   74 (107)
T 1wjp_A            5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHE-RLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLE   74 (107)
T ss_dssp             CCCCCCCCCCCCCBCTTTCCBCSSHHHHHHHH-HHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGG
T ss_pred             cccCcccCCCcCeECCCCCCccCCHHHHHHHH-HHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCcc
Confidence            34567889999999999999999999999999 567  478999999999999999999996 99999999964

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=1.6e-17  Score=81.59  Aligned_cols=65  Identities=22%  Similarity=0.378  Sum_probs=57.5

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCC---CCCeecCccccccCCHHHHHHHHH-HhcCCCCce
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQG---HPSVTCNVCGRTFSSIANLAEHKR-SRHGITGFV   88 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~---~~~~~c~~C~~~f~~~~~l~~h~~-~~~~~k~~~   88 (94)
                      .|+++++|.|.+|++.|.....|..|+ ..|.+   +++|.|.+|++.|.....|..|++ .|.++++..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHH-HHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHH-HHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            378899999999999999999999999 67875   899999999999999999999995 566666654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=4.4e-18  Score=93.01  Aligned_cols=89  Identities=17%  Similarity=0.305  Sum_probs=75.6

Q ss_pred             CCCCCCccccccCCCCCCCCcc---cCCCCCCcccccc-----ccccCChHHHHhHHHhhcCCCCCeecCc--cccccCC
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLF---RFDRTKPHSCDLC-----GKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSS   70 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~---~h~~~~~~~c~~c-----~~~f~~~~~l~~H~~~~h~~~~~~~c~~--C~~~f~~   70 (94)
                      +.|+.|+..|.....+ ..|+.   .|.++++|.|..|     ++.|.....|..|+ ..|.++++|.|.+  |++.|..
T Consensus         4 ~~C~~C~~~f~~~~~L-~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQL-VHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM-RRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CCBTTCCCBCSCHHHH-HHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHT-HHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CCcCCCccccCCHHHH-HHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHH-HhcCCCCCccCCCCCCCCcccC
Confidence            3577788888775554 45565   6888899998753     48999999999999 7899999999986  9999999


Q ss_pred             HHHHHHHHHHhcCCCCceEee
Q psy12166         71 IANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        71 ~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ...|..|+++|.++++|.|+.
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~  102 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEH  102 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCS
T ss_pred             HHHHHHHHHHcCCCCCeeCCC
Confidence            999999999999999999973

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.70  E-value=2.1e-17  Score=81.59  Aligned_cols=62  Identities=21%  Similarity=0.523  Sum_probs=58.8

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ||.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|+++|.++++|+|+.
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   62 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV   62 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHH-HHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTT
T ss_pred             CccCCCCcccccCchhHHHHH-HHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCC
Confidence            689999999999999999999 68999999999999999999999999999999999999863

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.2e-16  Score=77.45  Aligned_cols=64  Identities=23%  Similarity=0.558  Sum_probs=57.5

Q ss_pred             CCCcccCCCCCCcccc--ccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhc
Q psy12166         18 AEPLFRFDRTKPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        18 ~~~~~~h~~~~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      ......+.++++|.|+  .|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+++|+
T Consensus         8 ~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            8 NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             chhhccCCCCCccCCcCCCCCCccCCHHHHHHHH-HhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3445668889999997  5999999999999999 78999999999999999999999999998773

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.9e-16  Score=74.03  Aligned_cols=56  Identities=23%  Similarity=0.601  Sum_probs=51.8

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHH-HHhcCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHK-RSRHGI   84 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~-~~~~~~   84 (94)
                      +||.|..|++.|.....|..|+ ..|.++++|.|.+|++.|.....|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5899999999999999999999 7899999999999999999999999997 567765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.66  E-value=2.1e-17  Score=93.10  Aligned_cols=87  Identities=29%  Similarity=0.479  Sum_probs=74.7

Q ss_pred             CCC--CCCccccccCCCCCCCCcccCCCCCCccc--cccccccCChHHHHhHHHhhcCCCCCeecC--ccccccCCHHHH
Q psy12166          1 MDC--GWKKTAYEIGLGIPAEPLFRFDRTKPHSC--DLCGKTYTLAKHLWGHVKSAHQGHPSVTCN--VCGRTFSSIANL   74 (94)
Q Consensus         1 ~~C--~~~~~~~~~~~~~~~~~~~~h~~~~~~~c--~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~--~C~~~f~~~~~l   74 (94)
                      |.|  ..|+..|.....+ ..|++.|.++++|.|  ..|++.|.....|..|+ ..|.++++|.|.  .|++.|.....|
T Consensus        13 ~~C~~~~C~~~f~~~~~L-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           13 YICSFADCGAAYNKNWKL-QAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CBCSSTTTCCBCSSHHHH-HHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             eeCCCCCCcchhCCHHHH-HHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCCCCccCCHHHH
Confidence            467  4577777764443 567888999999999  88999999999999999 789999999999  899999999999


Q ss_pred             HHHH-HHh-cCCCCceE
Q psy12166         75 AEHK-RSR-HGITGFVV   89 (94)
Q Consensus        75 ~~h~-~~~-~~~k~~~C   89 (94)
                      ..|+ +.| .++++|.|
T Consensus        91 ~~H~~~~h~~~~~~~~C  107 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVC  107 (190)
T ss_dssp             HHHHHTTSSTTTSCCEE
T ss_pred             HHHHHHhcCCCcceeeC
Confidence            9999 556 47889999

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=1.8e-18  Score=90.58  Aligned_cols=87  Identities=16%  Similarity=0.250  Sum_probs=71.7

Q ss_pred             CCCCCCccccccCCCCCCCCccc--CCCCCCcc-cccccccc--CChHHHHhHHHhhcCCCCCeecCccccccCCHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFR--FDRTKPHS-CDLCGKTY--TLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLA   75 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~--h~~~~~~~-c~~c~~~f--~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~   75 (94)
                      |.|..|+..|.....+ ..|++.  |.+.+++. |..|++.|  .....|..|+ ..|.++++|.|.+|++.|.....|.
T Consensus        20 ~~C~~C~k~f~~~~~L-~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~   97 (115)
T 2dmi_A           20 FRCKDCSAAYDTLVEL-TVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEME-GKEDAQKVLKCMYCGHSFESLQDLS   97 (115)
T ss_dssp             EEBSSSSCEESSHHHH-HHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC-CSCCCCSSCBCSSSCCBCSSHHHHH
T ss_pred             EECCccCchhcCHHHH-HHHHHHhCccccCCCccCCCCCcccccccHHHHHHHh-hccCCCcceECCCCCCccCCHHHHH
Confidence            4688998888875554 455666  66666554 99999999  8889999998 7899999999999999999999999


Q ss_pred             HHHHHhcCCCCceE
Q psy12166         76 EHKRSRHGITGFVV   89 (94)
Q Consensus        76 ~h~~~~~~~k~~~C   89 (94)
                      .|+++++.......
T Consensus        98 ~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           98 VHMIKTKHYQKVSG  111 (115)
T ss_dssp             HHHHHTTTTTCSCC
T ss_pred             HHHHHhCCcccCCC
Confidence            99999887665543

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.65  E-value=3.2e-17  Score=82.20  Aligned_cols=60  Identities=27%  Similarity=0.680  Sum_probs=38.9

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      +||.|..|++.|.....|..|+ ..|.++++|.|..|++.|.....|..|+++|++ .+|.|
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c   61 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILE   61 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchH
Confidence            5666666666666666666666 456666666666666666666666666666653 44544

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=7.1e-19  Score=85.22  Aligned_cols=68  Identities=15%  Similarity=0.214  Sum_probs=61.3

Q ss_pred             CCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         16 IPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        16 ~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .+..|++.|.++++|.|..|++.|.....|..        +++|.|.+|++.|.....|..|+++|.++++|.|+.
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            45678899999999999999999998877654        779999999999999999999999999999999974

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.64  E-value=4.5e-16  Score=81.60  Aligned_cols=65  Identities=31%  Similarity=0.625  Sum_probs=61.1

Q ss_pred             CCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecC--ccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         25 DRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCN--VCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        25 ~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .++++|.|..  |++.|.....|..|+ ..|.++++|.|.  .|++.|.....|..|+++|.++++|.|+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   70 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK   70 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECT
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHH-HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCC
Confidence            4678999997  999999999999999 689999999999  7999999999999999999999999986

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=8.7e-16  Score=76.80  Aligned_cols=64  Identities=38%  Similarity=0.736  Sum_probs=59.7

Q ss_pred             CCCccccc--cccccCChHHHHhHHHhhcCCCCCeecC--ccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         27 TKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCN--VCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        27 ~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ..+|.|..  |++.|.....|..|+ ..|.++++|.|+  .|++.|.....|..|+++|.++++|+|+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   70 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK   70 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHH-TTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHH-HhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCC
Confidence            46899999  999999999999999 789999999997  59999999999999999999999999963

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.60  E-value=3.2e-17  Score=81.39  Aligned_cols=77  Identities=21%  Similarity=0.349  Sum_probs=57.2

Q ss_pred             CCC--CCCccccccCCCCCCCCcccCCCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecCc---cccccCCHHH
Q psy12166          1 MDC--GWKKTAYEIGLGIPAEPLFRFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNV---CGRTFSSIAN   73 (94)
Q Consensus         1 ~~C--~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~~---C~~~f~~~~~   73 (94)
                      |.|  ..|+..+.....+ ..|++.|.++++|.|+.  |++.|.....|..|+ ..|.+   |.|..   |++.|.....
T Consensus         2 ~~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQL-KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-KVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             EECCSTTCCCEESSHHHH-HHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHH-HHHHS---EECCSCSSCCCEESSHHH
T ss_pred             ccCCCCCCCcccCCHHHH-HHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHH-HHhCC---CCCCCCCCCCCccCCHHH
Confidence            357  5577666654443 45667777788888877  888888888888887 56766   88888   8888888888


Q ss_pred             HHHHHHHhc
Q psy12166         74 LAEHKRSRH   82 (94)
Q Consensus        74 l~~h~~~~~   82 (94)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            888887764

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.60  E-value=3e-15  Score=76.30  Aligned_cols=66  Identities=30%  Similarity=0.632  Sum_probs=60.5

Q ss_pred             CCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecC--ccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         25 DRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCN--VCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        25 ~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ..+++|.|..  |++.|.....|..|+ ..|.++++|.|.  .|++.|.....|..|+++|.++++|+|+.
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   80 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV   80 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHH-HHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSS
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHH-HHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCC
Confidence            3457899996  999999999999999 689999999996  69999999999999999999999999964

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.59  E-value=9.2e-16  Score=81.65  Aligned_cols=59  Identities=22%  Similarity=0.438  Sum_probs=55.3

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      .|.+++||.|..|++.|.....|..|+ ..|  +++|.|.+|++.|.....|..|+++|+|+
T Consensus        68 ~h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           68 ASKAISQFVCPLCLMPFSSSVSLKQHI-RYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHCSEECTTTCCEESSHHHHHHHH-HHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HhCCCCCeECCCCCcccCCHhHHHHHH-HHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            577789999999999999999999999 678  88999999999999999999999999986

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.58  E-value=2.7e-18  Score=86.15  Aligned_cols=80  Identities=13%  Similarity=0.223  Sum_probs=69.1

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHH
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      |.|..|+..|.....+ ..|++.|.++++|.|..|++.|.....|..|+ ..|.+ .++.|..|++.|.....|..|++.
T Consensus         4 ~~C~~C~k~f~~~~~L-~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            4 FQCRICMRNFSRSDHL-TTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             EECTTTCCEESCHHHH-HHHHHHHHCCCCEECTTTCCEESSHHHHHHHH-HHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCccCCHHHH-HHHHHHcCCCCCccCCCCCCccCCHHHHHHHH-HHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4699999888875554 56788899999999999999999999999999 55654 789999999999999999999987


Q ss_pred             hcC
Q psy12166         81 RHG   83 (94)
Q Consensus        81 ~~~   83 (94)
                      +++
T Consensus        81 ~h~   83 (88)
T 1llm_C           81 LKK   83 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            653

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=1.2e-15  Score=72.67  Aligned_cols=59  Identities=17%  Similarity=0.343  Sum_probs=53.8

Q ss_pred             CCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC-ccccccCCHHHHHHHHHHhcCCCC
Q psy12166         25 DRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN-VCGRTFSSIANLAEHKRSRHGITG   86 (94)
Q Consensus        25 ~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~-~C~~~f~~~~~l~~h~~~~~~~k~   86 (94)
                      -+++||.|..|++.|. ...|..|+ .. .++++|.|. .|++.|.....|..|+++|-..++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~-~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQ-YQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHH-HH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHH-HH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4578999999999999 99999999 56 889999999 999999999999999999877654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.57  E-value=6.1e-15  Score=65.37  Aligned_cols=45  Identities=22%  Similarity=0.254  Sum_probs=35.6

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHH-HHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHH-HhcCCCCCCCCCCC
Confidence            4667778888888888888888888888887 67888888888765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=7.4e-15  Score=65.13  Aligned_cols=45  Identities=22%  Similarity=0.315  Sum_probs=34.7

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHS-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHH-HHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4567777778888888888888888888887 67777788877765

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.1e-16  Score=78.61  Aligned_cols=67  Identities=22%  Similarity=0.423  Sum_probs=56.8

Q ss_pred             CCCCC--CccccccCCCCCCCCcc-cCCCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecCccccccC
Q psy12166          1 MDCGW--KKTAYEIGLGIPAEPLF-RFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFS   69 (94)
Q Consensus         1 ~~C~~--~~~~~~~~~~~~~~~~~-~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~   69 (94)
                      |.|.+  |+..+.....+ ..|++ .|.++++|.|..  |++.|.....|..|+ ..|.++++|.|.+|++.|.
T Consensus         8 ~~C~~~~C~~~f~~~~~L-~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            8 MPCDFPGCGRIFSNRQYL-NHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             EECSSTTTCCEESSHHHH-HHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCSSSCCCC
T ss_pred             ccCCCCCCcCccCCHHHH-HHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHH-HHhCCCCCeeCCCCCCCCC
Confidence            35666  88777765544 56677 799999999999  999999999999999 6899999999999999883

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.56  E-value=7.1e-15  Score=65.18  Aligned_cols=45  Identities=18%  Similarity=0.146  Sum_probs=36.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQ-NVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHG-GGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHH-HHcCCCCCcCCCCC
Confidence            4677788888888888888888888888887 67888888888765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=7.9e-15  Score=65.03  Aligned_cols=45  Identities=27%  Similarity=0.359  Sum_probs=36.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHG-GGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHh-hhcCCCCCCCCCCC
Confidence            4667788888888888888888888888887 67888888888775

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.56  E-value=6.2e-15  Score=65.34  Aligned_cols=45  Identities=24%  Similarity=0.320  Sum_probs=36.0

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHG-GGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4667788888888888888888888888887 67888888888765

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.56  E-value=8.3e-15  Score=64.92  Aligned_cols=45  Identities=24%  Similarity=0.389  Sum_probs=35.2

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHH-TTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4667777788888888888888888888887 67888888887765

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.55  E-value=7.3e-15  Score=65.18  Aligned_cols=45  Identities=24%  Similarity=0.369  Sum_probs=31.1

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHH-HHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3556667777777777777777777777776 56777777777655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=7.3e-15  Score=65.16  Aligned_cols=45  Identities=22%  Similarity=0.324  Sum_probs=33.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQ-RIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHH-GGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHH-HHhcCCCCCCCCCC
Confidence            4566777777777777777777777777777 57777777777765

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=8.1e-15  Score=64.96  Aligned_cols=45  Identities=27%  Similarity=0.350  Sum_probs=34.0

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQ-RIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHH-GGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3566777777788888888888777788887 67777777777765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=8.2e-15  Score=64.98  Aligned_cols=45  Identities=24%  Similarity=0.364  Sum_probs=32.2

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQ-QIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHH-HTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4566677777777777777777777777776 56777777777665

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=8.2e-15  Score=64.94  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=34.5

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQ-RTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHH-HHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4567777778888888888888888888887 67777777877765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=7.9e-15  Score=65.04  Aligned_cols=45  Identities=22%  Similarity=0.276  Sum_probs=34.2

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHH-TTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHH-hhcCCCCCCCCCCC
Confidence            4667777777888888888888888888887 67777777777765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=1e-14  Score=64.66  Aligned_cols=45  Identities=22%  Similarity=0.321  Sum_probs=36.7

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHH-TTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            4677788888888888888888888888887 67888888888776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=1e-14  Score=64.60  Aligned_cols=45  Identities=24%  Similarity=0.307  Sum_probs=32.9

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|.+|++.|.....|..|+ ..|.++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHH-HHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            4566777777777777777777777777777 56777777777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=9.2e-15  Score=64.81  Aligned_cols=45  Identities=22%  Similarity=0.287  Sum_probs=30.2

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHH-HHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3556666667777777777777777777776 56666667766654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.55  E-value=7.4e-15  Score=65.16  Aligned_cols=45  Identities=22%  Similarity=0.241  Sum_probs=34.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHH-KLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHH-HHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4667777778888888888888888888887 57777777877765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.55  E-value=1.3e-14  Score=64.39  Aligned_cols=45  Identities=22%  Similarity=0.299  Sum_probs=35.7

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHM-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHH-TTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            4667778888888888888888888888887 67888888888765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1.2e-14  Score=64.40  Aligned_cols=45  Identities=22%  Similarity=0.223  Sum_probs=36.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHR-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHH-TTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4667788888888888888888888888887 67888888888765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1e-14  Score=64.61  Aligned_cols=45  Identities=27%  Similarity=0.383  Sum_probs=33.8

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|+.|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHH-GGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            4566777777788877877777777777777 67777777777765

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=8.3e-15  Score=64.95  Aligned_cols=45  Identities=24%  Similarity=0.305  Sum_probs=34.1

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|.++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQ-LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHH-TTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3566777777888888888888888888887 67777777777765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=8.4e-15  Score=64.98  Aligned_cols=45  Identities=22%  Similarity=0.224  Sum_probs=33.3

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHG-GGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3566777777777777777777777777777 57777777777765

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=7.1e-15  Score=65.16  Aligned_cols=45  Identities=24%  Similarity=0.422  Sum_probs=31.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHH-HHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            3566677777777777777777777777776 56777777777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=6.7e-15  Score=64.69  Aligned_cols=44  Identities=18%  Similarity=0.232  Sum_probs=28.2

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      |+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQ-QTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHH-HHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            345566666666666666666666666666 45666666666654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.54  E-value=7.2e-15  Score=72.74  Aligned_cols=58  Identities=24%  Similarity=0.496  Sum_probs=53.9

Q ss_pred             Cccc--cccccccCChHHHHhHHHhhcCCCCCeecCc--cccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         29 PHSC--DLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        29 ~~~c--~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      ||.|  +.|++.|.....|..|+ ..|.++++|.|++  |++.|.....|..|+++|++   |.|+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~   62 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCK   62 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECC
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCC
Confidence            6889  89999999999999999 7899999999988  99999999999999999998   6664

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=8.5e-15  Score=64.93  Aligned_cols=45  Identities=20%  Similarity=0.299  Sum_probs=30.6

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQ-RTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHH-HHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3556666667777777777777777777776 56776777776655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=9.4e-15  Score=64.81  Aligned_cols=45  Identities=29%  Similarity=0.409  Sum_probs=33.9

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHH-TTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4566777777788888888887777787787 67777777777765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1.2e-14  Score=64.51  Aligned_cols=45  Identities=24%  Similarity=0.264  Sum_probs=35.3

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHG-GGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3567777888888888888888888888887 67888888887765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=1.1e-14  Score=64.59  Aligned_cols=45  Identities=24%  Similarity=0.300  Sum_probs=31.8

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|++.|.+++||.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHR-RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHH-HHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHH-HHcCCCCCCCCCCC
Confidence            3566677777777777777777777777776 56777777777665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.54  E-value=7.9e-15  Score=65.03  Aligned_cols=45  Identities=27%  Similarity=0.364  Sum_probs=30.2

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHW-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHH-HHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHH-HHHCCCCCCCCCCC
Confidence            3556666667777777777777777777776 56666666766654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=1.3e-14  Score=64.28  Aligned_cols=45  Identities=20%  Similarity=0.348  Sum_probs=35.2

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQ-RSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            4567777788888888888888888888887 67888888887765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=9.9e-15  Score=64.71  Aligned_cols=45  Identities=22%  Similarity=0.356  Sum_probs=35.9

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHG-GGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4667778888888888888888888888887 67888888888765

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.54  E-value=1.2e-14  Score=64.46  Aligned_cols=45  Identities=24%  Similarity=0.322  Sum_probs=33.8

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQ-RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHH-TTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4566777777788877888887777777777 67777777777765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.54  E-value=9.7e-15  Score=64.74  Aligned_cols=45  Identities=20%  Similarity=0.251  Sum_probs=30.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHH-TGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3556666667777777777777777777776 56666677766654

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=6.3e-15  Score=65.40  Aligned_cols=45  Identities=22%  Similarity=0.309  Sum_probs=27.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|++.|.+++||.|..|++.|.....|..|+ ..|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHL-KRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHH-HHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            3455566666666666666666666666665 45666666666554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.53  E-value=1.1e-14  Score=64.47  Aligned_cols=45  Identities=24%  Similarity=0.343  Sum_probs=35.6

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHG-GGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            4667778888888888888888888888887 67888888888765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.53  E-value=2.5e-14  Score=69.02  Aligned_cols=60  Identities=33%  Similarity=0.707  Sum_probs=53.6

Q ss_pred             cccCCCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecCc--cccccCCHHHHHHHHHHh
Q psy12166         21 LFRFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNV--CGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        21 ~~~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~~--C~~~f~~~~~l~~h~~~~   81 (94)
                      .......++|.|..  |++.|.....|..|+ ..|.++++|.|.+  |++.|.....|..|+++|
T Consensus         9 ~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A            9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHT-RTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCCEECSSTTTCCEESSHHHHHHHH-HHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCCccccCceeCCCCCCccccCCHHHHHHHH-HhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            44556778999998  999999999999999 7899999999975  999999999999998764

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1e-14  Score=64.63  Aligned_cols=45  Identities=24%  Similarity=0.381  Sum_probs=32.0

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHG-GGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3566677777777777777777777777776 56777777777665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=7.4e-15  Score=65.12  Aligned_cols=44  Identities=23%  Similarity=0.308  Sum_probs=26.2

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      |+++|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQ-VIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHH-HHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            455556666666666666666666666665 45666666665554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=7.1e-15  Score=65.19  Aligned_cols=44  Identities=23%  Similarity=0.326  Sum_probs=26.7

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHH-HHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            455566666666666666666666666665 45666666666554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=1.3e-14  Score=64.37  Aligned_cols=45  Identities=22%  Similarity=0.273  Sum_probs=33.5

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQ-VLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHH-HHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4566777777777777777777777777777 56777777777765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=1.8e-14  Score=64.03  Aligned_cols=45  Identities=22%  Similarity=0.245  Sum_probs=36.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHh-hcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKS-AHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~-~h~~~~~~~c~~C   64 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ . .|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHW-RYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHH-TTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHh-HhhcCCCCCCCCCCC
Confidence            4677788888888888888888888888887 6 7888888888765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.53  E-value=1.8e-14  Score=63.88  Aligned_cols=45  Identities=16%  Similarity=0.155  Sum_probs=32.7

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ-RMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHH-GGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            3566777777777777777777777777776 56777777777665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.53  E-value=8.1e-15  Score=65.01  Aligned_cols=45  Identities=27%  Similarity=0.365  Sum_probs=36.5

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|++.|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4667788888888888888888888888887 67888888888776

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.52  E-value=1.6e-16  Score=74.55  Aligned_cols=55  Identities=24%  Similarity=0.453  Sum_probs=48.5

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      |.|..|+..|.....+ ..|+++|++++||.|.+||+.|.....|..|+ ++|++++
T Consensus         5 y~C~~C~k~F~~~~~L-~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~-~~Htgep   59 (60)
T 4gzn_C            5 FFCNFCGKTYRDASGL-SRHRRAHLGYRPRSCPECGKCFRDQSEVNRHL-KVHQNKP   59 (60)
T ss_dssp             EECTTTCCEESSHHHH-HHHHHHHHTCCCEECTTTCCEESSHHHHHHHG-GGGSCC-
T ss_pred             ccCCCCCCEeCCHHHH-HHHHHHhCCCcCeECCCCCCCcCCHHHHHHHh-CccCCCC
Confidence            5799999999886555 67889999999999999999999999999999 7899875

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.2e-14  Score=64.43  Aligned_cols=45  Identities=24%  Similarity=0.274  Sum_probs=35.2

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|+.|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ-KVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHH-TTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHH-HhhCCCCCCCCCCC
Confidence            4667777788888888888888888888887 67888888887765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.9e-14  Score=63.77  Aligned_cols=45  Identities=24%  Similarity=0.340  Sum_probs=32.1

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHH-TTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4566677777777777777777777777776 56777777777653

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.4e-14  Score=64.32  Aligned_cols=44  Identities=20%  Similarity=0.197  Sum_probs=30.4

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      |+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQ-RLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHH-HHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            456666677777777777777777777776 56666777776655

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.52  E-value=1.4e-14  Score=64.22  Aligned_cols=45  Identities=24%  Similarity=0.336  Sum_probs=30.8

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQ-RTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHH-HHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHH-HHcCCCCCCCCCCC
Confidence            3556666677777777777777777777776 56777777776655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.51  E-value=8.7e-15  Score=64.90  Aligned_cols=45  Identities=27%  Similarity=0.347  Sum_probs=29.9

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHR-RVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHT-HHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            3556666666777777777777777777776 56666666666654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.51  E-value=2.3e-14  Score=65.68  Aligned_cols=49  Identities=33%  Similarity=0.493  Sum_probs=44.4

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSS   70 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~   70 (94)
                      ..|.++++|.|.+|++.|.....|..|++..|.++++|.|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4577889999999999999999999998448999999999999999975

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.50  E-value=1.6e-14  Score=64.04  Aligned_cols=44  Identities=25%  Similarity=0.201  Sum_probs=29.4

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQ-RVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHH-HHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            455666666777777777777766777776 56666666666655

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.50  E-value=1e-14  Score=63.48  Aligned_cols=38  Identities=26%  Similarity=0.586  Sum_probs=21.2

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      .|+++++|.|.+|++.|.....|..|+++|.+++||+|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            45555555555555555555555555555555555555

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.50  E-value=6e-15  Score=67.64  Aligned_cols=51  Identities=24%  Similarity=0.169  Sum_probs=42.2

Q ss_pred             cccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCce
Q psy12166         37 KTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFV   88 (94)
Q Consensus        37 ~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~   88 (94)
                      +.|.....|..|+ ..|+++++|.|.+|++.|.....|..|+++|.|++||+
T Consensus         4 k~~~~~~~l~~h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPR-SRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCH-HHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHH-HhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4566677788887 67888888888888888888888888888888888874

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=4.1e-14  Score=62.68  Aligned_cols=43  Identities=26%  Similarity=0.397  Sum_probs=27.7

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHL-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHH-HHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            455666666666666666666666666666 4566666666654

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.49  E-value=1.1e-14  Score=64.60  Aligned_cols=44  Identities=27%  Similarity=0.463  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSG-SSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCC-CccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.49  E-value=1e-14  Score=64.67  Aligned_cols=42  Identities=24%  Similarity=0.413  Sum_probs=21.7

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHH-HHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            444455555555555555555555555554 345555555544

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.1e-14  Score=64.59  Aligned_cols=42  Identities=26%  Similarity=0.392  Sum_probs=20.9

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |++.|.++++|.|..|++.|.....|..|+ ..|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQ-KTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHH-HHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            344444555555555555555555555554 345555555443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.49  E-value=1.2e-14  Score=63.78  Aligned_cols=38  Identities=29%  Similarity=0.582  Sum_probs=19.5

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      .|+++++|.|.+|++.|.....|..|+++|.+++||+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            6 SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            44445555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.4e-14  Score=64.24  Aligned_cols=42  Identities=21%  Similarity=0.310  Sum_probs=20.3

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHR-RSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHH-HHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            344444445555555555555555555554 344444444443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1e-14  Score=64.69  Aligned_cols=39  Identities=33%  Similarity=0.468  Sum_probs=20.3

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .|+++++|.|.+|++.|.....|..|+++|.+++||+|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            6 SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555553

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.4e-14  Score=64.25  Aligned_cols=44  Identities=23%  Similarity=0.363  Sum_probs=40.9

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSG-SSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSS-CTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             Ccc-cCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.8e-14  Score=62.58  Aligned_cols=40  Identities=23%  Similarity=0.301  Sum_probs=19.7

Q ss_pred             cccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         21 LFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        21 ~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      +++|.+++||.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   41 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQ-KMHTVKSGPSS   41 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHH-HHTSCCSSCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            34444455555555555555555555554 34554444443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.1e-14  Score=64.56  Aligned_cols=39  Identities=26%  Similarity=0.451  Sum_probs=19.0

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .|+++++|.|.+|++.|.....|..|+++|.+++||+|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            6 SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             ccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            344444444444444444444444444444444454443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=1.2e-14  Score=63.88  Aligned_cols=41  Identities=17%  Similarity=0.277  Sum_probs=20.9

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHE-RTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHH-HHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHh-HhcCCCCCCCC
Confidence            344455555555555555555555555554 34555555444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.3e-14  Score=64.36  Aligned_cols=44  Identities=27%  Similarity=0.428  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSG-SSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCC-CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.1e-14  Score=64.51  Aligned_cols=42  Identities=24%  Similarity=0.335  Sum_probs=23.3

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |++.|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQ-ATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHH-HHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHH-HHcCCCCCCCCC
Confidence            445555555555555555555555555555 455555555554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.48  E-value=1.4e-14  Score=64.17  Aligned_cols=44  Identities=27%  Similarity=0.396  Sum_probs=40.9

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            2 SSG-SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             Ccc-cccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1e-14  Score=64.64  Aligned_cols=43  Identities=23%  Similarity=0.359  Sum_probs=27.9

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHG-GGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            3455666666666666666666666666666 566666666665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.2e-14  Score=64.40  Aligned_cols=44  Identities=27%  Similarity=0.477  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ .+|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSG-SSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCC-CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=9.8e-14  Score=61.41  Aligned_cols=44  Identities=27%  Similarity=0.388  Sum_probs=29.3

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHR-GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHH-TTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHH-HhhCCCCCCCCCC
Confidence            3556666667777777777777777777776 5666666666653

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.47  E-value=1.3e-14  Score=64.35  Aligned_cols=44  Identities=27%  Similarity=0.452  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSG-SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSC-SSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCc-cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.1e-14  Score=64.54  Aligned_cols=42  Identities=19%  Similarity=0.248  Sum_probs=26.9

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHH-TTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            455666666666666666666666666666 566666666665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.4e-14  Score=64.18  Aligned_cols=42  Identities=21%  Similarity=0.308  Sum_probs=23.5

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |++.|.++++|.|..|++.|.....|..|+ ..|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQ-RTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHH-HTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            445555555555555555555555555555 455555555554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.4e-14  Score=64.23  Aligned_cols=44  Identities=25%  Similarity=0.389  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.++++|+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            2 SSG-SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCC-CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCC-CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.6e-14  Score=64.00  Aligned_cols=44  Identities=23%  Similarity=0.434  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSG-SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSS-SCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCC-CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.2e-14  Score=64.42  Aligned_cols=43  Identities=23%  Similarity=0.322  Sum_probs=27.6

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQ-RIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHH-GGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3555666666666666666666666666666 556666666665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.6e-14  Score=64.04  Aligned_cols=44  Identities=27%  Similarity=0.427  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            2 SSG-SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCc-ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.9e-14  Score=63.80  Aligned_cols=42  Identities=19%  Similarity=0.243  Sum_probs=23.7

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |++.|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQ-RIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHH-GGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHH-hHhCCCCCCCCC
Confidence            445555555555555555555555555555 455555555554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.6e-14  Score=63.94  Aligned_cols=44  Identities=30%  Similarity=0.453  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            2 SSG-SSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCc-CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.2e-14  Score=64.37  Aligned_cols=44  Identities=25%  Similarity=0.422  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSG-SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCC-cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999973

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.6e-14  Score=63.96  Aligned_cols=44  Identities=27%  Similarity=0.409  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSG-SSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCc-ccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.1e-13  Score=61.26  Aligned_cols=44  Identities=25%  Similarity=0.391  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSG-SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccc-cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999973

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.1e-14  Score=63.87  Aligned_cols=41  Identities=24%  Similarity=0.364  Sum_probs=24.6

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHT-RTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHH-TTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHh-hhcCCCCCCCC
Confidence            455556666666666666666666666665 45666555555

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.7e-14  Score=63.89  Aligned_cols=44  Identities=20%  Similarity=0.387  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            2 SSG-SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCC-CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCC-CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.47  E-value=7e-14  Score=61.93  Aligned_cols=44  Identities=30%  Similarity=0.451  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSG-SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCC-CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999973

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.5e-14  Score=64.10  Aligned_cols=44  Identities=30%  Similarity=0.520  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSG-SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCS-SCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCC-CCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.4e-14  Score=64.16  Aligned_cols=44  Identities=30%  Similarity=0.465  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSG-SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             Ccc-CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.1e-13  Score=61.22  Aligned_cols=43  Identities=23%  Similarity=0.313  Sum_probs=29.1

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQ-KIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHH-TTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3556666667777777777777777777776 566666666665

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=7.5e-14  Score=61.83  Aligned_cols=44  Identities=25%  Similarity=0.399  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSG-SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             Ccc-cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 68999999999999999999999999999999999999963

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=1.1e-13  Score=61.25  Aligned_cols=44  Identities=32%  Similarity=0.488  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSG-SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             Ccc-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=2.1e-14  Score=63.04  Aligned_cols=43  Identities=23%  Similarity=0.335  Sum_probs=39.7

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         1 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GS-SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CC-CCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CC-CCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            44 57899999999999999999999999999999999999974

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=7.2e-15  Score=71.83  Aligned_cols=59  Identities=24%  Similarity=0.444  Sum_probs=51.9

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |.|..|+..|.....+ ..|++.|.++++|.|.+|++.|.....|..|+ ..|++++||.|
T Consensus        19 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~p~~C   77 (77)
T 2cot_A           19 YKCDECGKSFSHSSDL-SKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH-RVHTGSGPSSG   77 (77)
T ss_dssp             SBCSSSCCBCSCHHHH-HHHHTTTCCSCSEECSSSCCEESSHHHHHHHG-GGSCCCCCCCC
T ss_pred             EECCCCCcccCCHHHH-HHHHHHcCCCcCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            5799999888775544 56788999999999999999999999999999 79999999986

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2e-14  Score=63.64  Aligned_cols=44  Identities=23%  Similarity=0.379  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSG-SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCC-CCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=2e-14  Score=63.74  Aligned_cols=42  Identities=24%  Similarity=0.245  Sum_probs=23.5

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHH-HHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            445555555555555555555555555555 455555555554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.47  E-value=9.9e-15  Score=64.71  Aligned_cols=44  Identities=25%  Similarity=0.415  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSG-SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCC-CCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999963

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.6e-14  Score=63.98  Aligned_cols=42  Identities=24%  Similarity=0.363  Sum_probs=20.7

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |++.|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHH-HHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHH-HhcCCCCCCCCC
Confidence            344444455555555555555555555554 344444444443

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.3e-14  Score=64.30  Aligned_cols=43  Identities=23%  Similarity=0.336  Sum_probs=27.4

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQ-VIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHH-TTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3455666666666666666666666666666 566666666654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.6e-14  Score=64.09  Aligned_cols=42  Identities=29%  Similarity=0.468  Sum_probs=26.8

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHG-GGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            455666666666666666666666666666 556666666654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.2e-13  Score=61.13  Aligned_cols=44  Identities=25%  Similarity=0.440  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSG-SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             Ccc-cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.5e-14  Score=64.03  Aligned_cols=42  Identities=26%  Similarity=0.372  Sum_probs=26.2

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHG-GGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHH-HhcCCCCCcCCC
Confidence            455566666666666666666666666665 456666666654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.4e-14  Score=64.16  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            2 SSG-SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCC-cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.7e-14  Score=63.90  Aligned_cols=44  Identities=27%  Similarity=0.390  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSG-SSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCC-CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCc-cccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.1e-13  Score=61.20  Aligned_cols=44  Identities=27%  Similarity=0.381  Sum_probs=31.0

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHH-TTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHh-HhcCCCCCCCCCC
Confidence            3566677777777777777777777777776 5677777776653

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.5e-14  Score=64.06  Aligned_cols=42  Identities=24%  Similarity=0.333  Sum_probs=24.9

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHH-TTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            455555566666666666666666666665 456555565554

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.2e-14  Score=63.53  Aligned_cols=44  Identities=27%  Similarity=0.468  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            2 SSG-SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCC-CCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CCc-cccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            366 68999999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.3e-13  Score=60.99  Aligned_cols=43  Identities=26%  Similarity=0.361  Sum_probs=29.7

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHH-TTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            3556667777777777777777777777776 567777777665

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.6e-14  Score=63.45  Aligned_cols=41  Identities=22%  Similarity=0.385  Sum_probs=24.2

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQ-KTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHH-TTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHH-HHcCCCCCCCC
Confidence            455555566666666666666666666665 45555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=8.3e-14  Score=61.68  Aligned_cols=44  Identities=27%  Similarity=0.422  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSG-SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSC-CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCc-cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            366 68999999999999999999999999999999999999973

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.6e-14  Score=64.05  Aligned_cols=44  Identities=25%  Similarity=0.385  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSG-SSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCC-cCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            366 67999999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=9.7e-14  Score=61.43  Aligned_cols=44  Identities=27%  Similarity=0.481  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSG-SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCC-CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999973

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.46  E-value=9.9e-14  Score=60.22  Aligned_cols=42  Identities=21%  Similarity=0.419  Sum_probs=38.8

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQ-RTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHH-GGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHH-HhcCCCCCCCCC
Confidence            567899999999999999999999999999 789999999884

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.46  E-value=1.3e-14  Score=64.23  Aligned_cols=44  Identities=30%  Similarity=0.422  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSG-SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCC-CCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccc-cCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=9.5e-14  Score=61.42  Aligned_cols=43  Identities=28%  Similarity=0.436  Sum_probs=40.2

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSG-SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCC-CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             Ccc-CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            466 6899999999999999999999999999999999999996

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=2.1e-14  Score=63.66  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=40.5

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSG-SSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCC-CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCC-CCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 68999999999999999999999999999999999999973

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.46  E-value=1.5e-14  Score=64.15  Aligned_cols=44  Identities=23%  Similarity=0.281  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSG-SSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCc-CccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            466 68999999999999999999999999999999999999974

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.9e-14  Score=63.78  Aligned_cols=44  Identities=23%  Similarity=0.396  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSG-SSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccc-cccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            366 68999999999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.1e-13  Score=61.17  Aligned_cols=44  Identities=27%  Similarity=0.448  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSG-SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCS-CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCC-CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            466 68999999999999999999999999999999999999973

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.2e-13  Score=61.07  Aligned_cols=44  Identities=25%  Similarity=0.419  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSG-SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCC-CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.5e-13  Score=60.79  Aligned_cols=43  Identities=28%  Similarity=0.330  Sum_probs=30.9

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHK-RVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHH-HHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3566677777777777777777777777776 567777777765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.9e-14  Score=63.76  Aligned_cols=44  Identities=27%  Similarity=0.428  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSG-SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             Ccc-cCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=1.8e-14  Score=63.86  Aligned_cols=44  Identities=27%  Similarity=0.393  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            2 SSG-SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCc-CCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.5e-13  Score=60.84  Aligned_cols=44  Identities=27%  Similarity=0.428  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSG-SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             Ccc-cccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=1.9e-14  Score=63.20  Aligned_cols=41  Identities=24%  Similarity=0.348  Sum_probs=21.7

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |++.|.++++|.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQ-KTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHG-GGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCC
Confidence            444555555555555555555555555555 44555555544

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.45  E-value=3.7e-14  Score=61.58  Aligned_cols=38  Identities=26%  Similarity=0.434  Sum_probs=18.3

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      .|+++++|.|.+|++.|.....|..|+++|.+++||+|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=1.8e-14  Score=63.81  Aligned_cols=44  Identities=32%  Similarity=0.454  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSG-SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             Ccc-ccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.4e-13  Score=60.30  Aligned_cols=43  Identities=30%  Similarity=0.496  Sum_probs=40.0

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSG-SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSC-CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCC-cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            466 6899999999999999999999999999999999999995

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.5e-14  Score=64.10  Aligned_cols=44  Identities=30%  Similarity=0.486  Sum_probs=40.5

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|.++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSG-SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCc-cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999963

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.6e-13  Score=59.48  Aligned_cols=42  Identities=24%  Similarity=0.392  Sum_probs=38.9

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|.
T Consensus         1 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GS-SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CC-SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CC-cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44 5789999999999999999999999999999999999984

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.45  E-value=2.6e-14  Score=63.35  Aligned_cols=43  Identities=26%  Similarity=0.366  Sum_probs=40.2

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            3 SG-SSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CC-CCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56 68999999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.1e-13  Score=61.23  Aligned_cols=43  Identities=23%  Similarity=0.306  Sum_probs=31.8

Q ss_pred             cccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         21 LFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        21 ~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      +++|.++++|.|..|++.|.....|..|+ ..|.++++|.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHH-TTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            45667777777777777777777777777 57777777777765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.5e-14  Score=62.93  Aligned_cols=43  Identities=28%  Similarity=0.416  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SG-SSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CC-CCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56 68999999999999999999999999999999999999963

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.9e-14  Score=63.13  Aligned_cols=44  Identities=27%  Similarity=0.444  Sum_probs=40.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSG-SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCC-CCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.6e-14  Score=63.32  Aligned_cols=44  Identities=25%  Similarity=0.437  Sum_probs=40.9

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSG-SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CST-TCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             Ccc-cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.7e-14  Score=64.00  Aligned_cols=42  Identities=26%  Similarity=0.415  Sum_probs=21.4

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHL-RLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHH-HHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            344455555555555555555555555554 345555555443

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.2e-13  Score=61.12  Aligned_cols=43  Identities=28%  Similarity=0.462  Sum_probs=32.0

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|+++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHH-SVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHT-TTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHH-HhcCCCCCCCCCC
Confidence            566777777777777777777777777777 5777777777753

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.4e-13  Score=60.86  Aligned_cols=44  Identities=25%  Similarity=0.401  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSG-SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCC-CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCC-cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            366 68999999999999999999999999999999999999973

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.4e-13  Score=60.94  Aligned_cols=44  Identities=27%  Similarity=0.398  Sum_probs=40.5

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~h~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSG-SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCC-CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            356 68999999999999999999999999999999999999973

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.4e-14  Score=63.42  Aligned_cols=44  Identities=23%  Similarity=0.339  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.++++|+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            2 SSG-SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             cCc-ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.3e-14  Score=64.26  Aligned_cols=44  Identities=27%  Similarity=0.439  Sum_probs=40.5

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSG-SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCC-cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            366 67999999999999999999999999999999999999963

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.5e-14  Score=64.07  Aligned_cols=44  Identities=30%  Similarity=0.474  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSG-SSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcC-cCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.7e-14  Score=63.24  Aligned_cols=43  Identities=28%  Similarity=0.425  Sum_probs=40.2

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            3 SG-SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CC-SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CC-CCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56 68999999999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.4e-13  Score=60.81  Aligned_cols=44  Identities=30%  Similarity=0.477  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSG-SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCc-cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999973

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.5e-14  Score=63.40  Aligned_cols=42  Identities=31%  Similarity=0.466  Sum_probs=39.6

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.++++|+|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SG-SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CC-CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CC-CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            56 6799999999999999999999999999999999999996

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.5e-13  Score=60.22  Aligned_cols=43  Identities=21%  Similarity=0.348  Sum_probs=39.8

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQ-RTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHH-HHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHH-HHhCCCCCCCCC
Confidence            5788999999999999999999999999999 789999999884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.7e-14  Score=62.07  Aligned_cols=39  Identities=23%  Similarity=0.409  Sum_probs=23.1

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      ..|+++++|.|.+|++.|.....|..|+++|.+++||+|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            345555566666666666666666666666666666654

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.2e-13  Score=60.52  Aligned_cols=43  Identities=26%  Similarity=0.495  Sum_probs=40.0

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.++++|+|+
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSG-SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSC-CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCc-cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            366 6899999999999999999999999999999999999995

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.2e-14  Score=63.16  Aligned_cols=41  Identities=27%  Similarity=0.447  Sum_probs=25.7

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHI-RVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTG-GGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            455566666666666666666666666666 55666666554

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=3.7e-14  Score=62.85  Aligned_cols=43  Identities=30%  Similarity=0.414  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            3 SG-SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CS-SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CC-cCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            55 67999999999999999999999999999999999999974

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=3.8e-14  Score=62.82  Aligned_cols=43  Identities=23%  Similarity=0.386  Sum_probs=40.0

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 h~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            3 SG-SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             SC-CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CC-cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 67999999999999999999999999999999999999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=4.4e-14  Score=62.02  Aligned_cols=38  Identities=24%  Similarity=0.458  Sum_probs=19.7

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      .|.++++|.|.+|++.|.....|..|+++|.+++||+|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            44444555555555555555555555555555555554

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2e-14  Score=63.64  Aligned_cols=42  Identities=24%  Similarity=0.399  Sum_probs=26.6

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |++.|.++++|.|..|++.|.....|..|+ ..|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQ-AIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHH-TTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            455666666666666666666666666666 566666666654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.9e-14  Score=63.18  Aligned_cols=44  Identities=32%  Similarity=0.477  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~h~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            2 SSG-SSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCS-CCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CCC-CccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            356 68999999999999999999999999999999999999974

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.2e-14  Score=63.51  Aligned_cols=44  Identities=32%  Similarity=0.496  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ .+|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            2 SSG-SSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSS-CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCC-cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.44  E-value=4e-14  Score=62.72  Aligned_cols=43  Identities=23%  Similarity=0.280  Sum_probs=40.0

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ +.|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 h~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            3 SG-SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             SC-CSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CC-CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55 68999999999999999999999999999999999999974

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=3.6e-14  Score=62.86  Aligned_cols=43  Identities=23%  Similarity=0.313  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ +.|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 h~-~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            3 SG-SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CC-SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CC-CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            55 67999999999999999999999999999999999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.44  E-value=1.2e-13  Score=60.88  Aligned_cols=42  Identities=26%  Similarity=0.468  Sum_probs=30.6

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccc
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCG   65 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~   65 (94)
                      .|++++||.|..|++.|.....|..|+ ..|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHH-HHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHH-HHccCCCCCCCcCCC
Confidence            456677777777777777777777777 567777777777764

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=8.5e-14  Score=61.57  Aligned_cols=43  Identities=28%  Similarity=0.425  Sum_probs=40.2

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSG-SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSS-SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCC-cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            466 6899999999999999999999999999999999999996

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.43  E-value=2.4e-14  Score=63.39  Aligned_cols=44  Identities=25%  Similarity=0.403  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSG-SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSC-CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCC-CCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999964

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=4.8e-14  Score=62.44  Aligned_cols=43  Identities=26%  Similarity=0.393  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ +.|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            3 SG-SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CS-SCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CC-CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            55 67999999999999999999999999999999999999974

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=7.9e-14  Score=61.76  Aligned_cols=43  Identities=21%  Similarity=0.244  Sum_probs=29.1

Q ss_pred             cccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         21 LFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        21 ~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      +++|.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHW-ITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHH-THHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            45566667777777777777777777776 56666666766655

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.5e-13  Score=59.64  Aligned_cols=41  Identities=24%  Similarity=0.417  Sum_probs=38.7

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|
T Consensus         2 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SS-GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CC-CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             Cc-cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56 679999999999999999999999999999999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.43  E-value=2e-13  Score=59.20  Aligned_cols=42  Identities=19%  Similarity=0.209  Sum_probs=38.8

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         1 ~H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~k~~~C   42 (42)
T 2epc_A            1 GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQ-RSCSQSGPSSG   42 (42)
T ss_dssp             CCCSCCCSSCCEECSSSCCEESSHHHHHHHH-HHTTCCCCCCC
T ss_pred             CCCccCCCCCCeECCCCCcccCCHHHHHHHh-hhcCCCCCCCC
Confidence            3678899999999999999999999999999 78999999986

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=2.2e-13  Score=59.67  Aligned_cols=43  Identities=23%  Similarity=0.431  Sum_probs=40.0

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.++++|+|+
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSG-SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCS-CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCc-cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            466 6799999999999999999999999999999999999985

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=3e-14  Score=63.12  Aligned_cols=43  Identities=23%  Similarity=0.332  Sum_probs=40.0

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            3 SG-SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CC-CSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CC-CCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            56 68999999999999999999999999999999999999964

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.3e-14  Score=63.57  Aligned_cols=43  Identities=26%  Similarity=0.440  Sum_probs=39.9

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SG-SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CS-SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CC-CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            45 67999999999999999999999999999999999999973

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.5e-13  Score=60.79  Aligned_cols=44  Identities=27%  Similarity=0.426  Sum_probs=40.6

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      .|+++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHL-RVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHH-HHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            5788999999999999999999999999999 7899999999874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=1.9e-13  Score=59.90  Aligned_cols=43  Identities=19%  Similarity=0.329  Sum_probs=40.0

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSG-SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCC-SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             Ccc-cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            466 6899999999999999999999999999999999999985

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.6e-13  Score=59.95  Aligned_cols=44  Identities=27%  Similarity=0.423  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSG-SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCC-CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             Ccc-cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999973

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=4.9e-14  Score=62.41  Aligned_cols=43  Identities=26%  Similarity=0.313  Sum_probs=40.0

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            3 SG-SSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CS-CCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             cc-cccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            55 68999999999999999999999999999999999999963

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.2e-14  Score=63.53  Aligned_cols=39  Identities=28%  Similarity=0.387  Sum_probs=20.3

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .|+++++|.|.+|++.|.....|..|+++|.+++||+|+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            6 SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555553

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=3.2e-14  Score=63.06  Aligned_cols=42  Identities=24%  Similarity=0.348  Sum_probs=29.3

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |+++|.++++|.|.+|++.|.....|..|+ ..|.++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQ-RVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHG-GGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            456666777777777777777777777776 567777777665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.42  E-value=1.7e-13  Score=61.22  Aligned_cols=43  Identities=23%  Similarity=0.411  Sum_probs=37.8

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcccc
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGR   66 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~   66 (94)
                      .+.++++|.|.+|++.|.....|..|+ ..|+++++|.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHK-LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHG-GGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHH-HhcCCCCCccCCCCCC
Confidence            466778999999999999999999998 7899999999999975

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=3.2e-14  Score=61.85  Aligned_cols=41  Identities=22%  Similarity=0.436  Sum_probs=24.3

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHL-RIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHT-TTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHH-HhcCCCCCCCC
Confidence            445555666666666666666666666665 45665555544

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.9e-13  Score=60.49  Aligned_cols=42  Identities=24%  Similarity=0.252  Sum_probs=28.1

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCC-CCCeecC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQG-HPSVTCN   62 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~-~~~~~c~   62 (94)
                      |+++|.+++||.|..|++.|.....|..|+ ..|++ +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHE-RIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHH-TTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            556666666777777777777767777776 56666 6666664

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=6.4e-14  Score=62.06  Aligned_cols=43  Identities=23%  Similarity=0.322  Sum_probs=39.9

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 h~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            3 SG-SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CC-CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CC-CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            45 67999999999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.8e-13  Score=60.55  Aligned_cols=43  Identities=26%  Similarity=0.322  Sum_probs=40.1

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQ-QSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHH-HHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHH-HHcCCCCCCCCC
Confidence            5788899999999999999999999999999 789999999986

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4e-14  Score=62.68  Aligned_cols=43  Identities=26%  Similarity=0.396  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 H~-~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            3 SG-SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CC-CCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CC-cCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            56 67999999999999999999999999999999999999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=2.2e-13  Score=59.16  Aligned_cols=41  Identities=22%  Similarity=0.438  Sum_probs=38.3

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|
T Consensus         2 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SS-GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CC-SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CC-cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45 578999999999999999999999999999999999987

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.4e-13  Score=59.66  Aligned_cols=43  Identities=30%  Similarity=0.471  Sum_probs=39.7

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         3 h~-~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SG-SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CC-CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CC-CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            45 57899999999999999999999999999999999999973

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.5e-13  Score=60.83  Aligned_cols=44  Identities=27%  Similarity=0.385  Sum_probs=40.6

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|+ ..|.++++|.|.+|++.|.....|..|+++|.++++|+|+.
T Consensus         2 ~h~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSG-SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCC-SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCC-cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999973

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.41  E-value=2.6e-14  Score=67.29  Aligned_cols=52  Identities=12%  Similarity=0.167  Sum_probs=45.9

Q ss_pred             CCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHH
Q psy12166         18 AEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIAN   73 (94)
Q Consensus        18 ~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~   73 (94)
                      ..|+++|.+++||.|+.|++.|.....|.    ..|+++++|.|..|++.|....+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCcc
Confidence            56788999999999999999999887775    47999999999999999987654

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.8e-14  Score=63.84  Aligned_cols=44  Identities=23%  Similarity=0.446  Sum_probs=40.7

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSG-SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCC-CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCC-CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            466 68999999999999999999999999999999999999974

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=3.2e-14  Score=62.46  Aligned_cols=41  Identities=24%  Similarity=0.334  Sum_probs=22.1

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQ-KIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTH-HHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHH-HHhCCCCCCCC
Confidence            444555555555555555555555555555 44555555544

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=7.7e-14  Score=61.95  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=40.1

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHH-HhcCCCCceEee
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR-SRHGITGFVVSA   91 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~-~~~~~k~~~C~~   91 (94)
                      |+ ..|+++++|.|.+|++.|.....|..|++ +|.+++||+|+.
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            3 SG-SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CC-CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             cc-cccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            56 68999999999999999999999999999 999999999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=2.2e-13  Score=60.33  Aligned_cols=40  Identities=23%  Similarity=0.349  Sum_probs=19.8

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      +.|.++++|.|..|++.|.....|..|+ ..|+++++|.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHH-HHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHH-HHhCCCCCCCCC
Confidence            3444445555555555555555555554 345555555443

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=4.5e-14  Score=62.54  Aligned_cols=42  Identities=29%  Similarity=0.389  Sum_probs=39.5

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcC-CCCceEe
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG-ITGFVVS   90 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~-~k~~~C~   90 (94)
                      |+ ..|.++++|.|.+|++.|.....|..|+++|.+ ++||+|+
T Consensus         3 H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SG-SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CC-CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             Cc-cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56 679999999999999999999999999999999 9999996

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=1.2e-13  Score=60.67  Aligned_cols=40  Identities=25%  Similarity=0.374  Sum_probs=21.6

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCee
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVT   60 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~   60 (94)
                      |+++|.+++||.|.+|++.|.....|..|+ ..|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~   42 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHE-RTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHH-GGGSSCSCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHH-hHhcCCCCCC
Confidence            445555555555555555555555555555 4555555544

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.40  E-value=1.8e-13  Score=59.07  Aligned_cols=38  Identities=24%  Similarity=0.451  Sum_probs=20.8

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      .|+++++|.|.+|++.|.....|..|+++|.+++||+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            34555555555555555555555555555555555554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=2.7e-13  Score=59.21  Aligned_cols=38  Identities=29%  Similarity=0.378  Sum_probs=20.9

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      |+++++|.|..|++.|.....|..|+++|.+++||+|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44555555555555555555555555555555555553

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=2e-13  Score=59.24  Aligned_cols=41  Identities=27%  Similarity=0.460  Sum_probs=38.2

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHV-LIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHT-HHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHH-HHcCCCCCCCC
Confidence            678899999999999999999999999999 78999999876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.7e-13  Score=60.62  Aligned_cols=43  Identities=19%  Similarity=0.352  Sum_probs=40.0

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|+++|.+++||.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHL-RSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHH-HHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            5788999999999999999999999999999 789999999986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=2e-13  Score=60.15  Aligned_cols=40  Identities=28%  Similarity=0.448  Sum_probs=20.2

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      ++|.++++|.|..|++.|.....|..|+ ..|+++++|.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQ-RIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHH-TTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHH-HHhCCCCCCCCC
Confidence            3444455555555555555555555554 445555555443

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=6.5e-13  Score=58.18  Aligned_cols=43  Identities=19%  Similarity=0.309  Sum_probs=39.3

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      .|++.|.++++|.|..|++.|.....|..|+ ..|+++++|.|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQ-ALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHH-HHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHH-HHHCCCCCCCCC
Confidence            3678889999999999999999999999999 789999999884

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=7.5e-13  Score=58.91  Aligned_cols=44  Identities=20%  Similarity=0.261  Sum_probs=33.2

Q ss_pred             CcccCCCCCCcccc--ccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166         20 PLFRFDRTKPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus        20 ~~~~h~~~~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      +.++|.++++|.|.  .|++.|.....|..|+ ..|+++++|.|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHR-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHH-TTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            45667777788887  7888888888888887 67777777777765

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.1e-13  Score=59.19  Aligned_cols=43  Identities=26%  Similarity=0.458  Sum_probs=39.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||.|.
T Consensus         2 ~H~-~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSG-SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCC-CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCC-cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            366 6899999999999999999999999999999999999983

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=8.2e-13  Score=58.40  Aligned_cols=41  Identities=27%  Similarity=0.467  Sum_probs=38.5

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +.|.++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999999973

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=7.9e-13  Score=57.94  Aligned_cols=42  Identities=29%  Similarity=0.507  Sum_probs=39.1

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      .|+ ..|+++++|.|.+|++.|.....|..|+++|.+++||.|
T Consensus         2 ~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSG-SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCC-CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCC-cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            366 689999999999999999999999999999999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=7.7e-13  Score=58.20  Aligned_cols=40  Identities=30%  Similarity=0.544  Sum_probs=38.1

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      ..|+++++|.|.+|++.|.....|..|+++|.++++|+|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999999996

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.9e-14  Score=74.04  Aligned_cols=63  Identities=11%  Similarity=0.038  Sum_probs=52.9

Q ss_pred             CCCCCCccccccCCCCCCCCcc-cC---CCCCCccccccccccCChHHHHhH-HHhhcCCCCCeecCccc
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLF-RF---DRTKPHSCDLCGKTYTLAKHLWGH-VKSAHQGHPSVTCNVCG   65 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~-~h---~~~~~~~c~~c~~~f~~~~~l~~H-~~~~h~~~~~~~c~~C~   65 (94)
                      |.|..|+..|.....+ ..|++ .|   .+++||.|..||+.|.....|..| + ..|++++||.|.++.
T Consensus        19 y~C~~Cgk~F~~~~~L-~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~-r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           19 YECKYCTFQTPDLNMF-TFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNL-KYHPGEENFKLTMVK   86 (102)
T ss_dssp             EECSSCSCEESCHHHH-HHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHH-HTSTTCCCEEEEECC
T ss_pred             cCCCCCCCccCCHHHH-HHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhcCCCCCeeCCccc
Confidence            4689999888875554 45665 58   568999999999999999999999 7 789999999998754

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=4.1e-14  Score=68.60  Aligned_cols=57  Identities=19%  Similarity=0.414  Sum_probs=49.8

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCe
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSV   59 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~   59 (94)
                      |.|..|+..|.....+ ..|++.|.++++|.|.+|++.|.....|..|+ ..|++++||
T Consensus        18 ~~C~~C~k~f~~~~~l-~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   74 (74)
T 2lce_A           18 YKCDRCQASFRYKGNL-ASHKTVHTGEKPYRCNICGAQFNRPANLKTHT-RIHSGEKPY   74 (74)
T ss_dssp             BCCTTSSCCBSCHHHH-HHHHHHHCCCCSEECTTTCCEESCHHHHHHHH-HHHCCSCCC
T ss_pred             eECCCCCceeCCHHHH-HHHHHHcCCCCCEECCCCCchhCCHHHHHHHH-HhcCCCCCC
Confidence            5799999888875554 56788999999999999999999999999999 789998875

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.7e-13  Score=59.51  Aligned_cols=41  Identities=24%  Similarity=0.379  Sum_probs=38.6

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +.|.++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57889999999999999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=1.5e-12  Score=56.81  Aligned_cols=41  Identities=12%  Similarity=0.111  Sum_probs=37.6

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      +.|.++++|.|..|++.|.....|..|+ ..|+++++|.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHT-LQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHH-HHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHH-HhhCCCCCccCCC
Confidence            4678899999999999999999999999 7899999999864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=6.5e-13  Score=58.68  Aligned_cols=41  Identities=27%  Similarity=0.429  Sum_probs=38.6

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ..|+++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999999974

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=6.4e-14  Score=69.90  Aligned_cols=55  Identities=15%  Similarity=0.226  Sum_probs=48.2

Q ss_pred             CCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166          2 DCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus         2 ~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      .|+.|+..|.....+ ..|+++|.+++||.|.+|++.|.....|.+|++..|+++.
T Consensus        30 ~C~~Cgk~F~~~~~L-~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           30 LCPVCGESFASKGAQ-ERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             ECTTSCCEESSHHHH-HHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             ECCCCCCCcCcHHHH-hhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            589999998886655 6788999999999999999999999999999867888764

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.33  E-value=1.3e-12  Score=57.44  Aligned_cols=41  Identities=29%  Similarity=0.514  Sum_probs=38.4

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .+|+++++|.|.+|++.|.....|..|+++|.++++|.|+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~   43 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS   43 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence            36889999999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=2.2e-12  Score=55.59  Aligned_cols=39  Identities=21%  Similarity=0.298  Sum_probs=36.1

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      ++|.++++|.|..|++.|.....|..|+ ..|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHE-RIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHG-GGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHH-HHhCCCCCcCC
Confidence            4688899999999999999999999999 78999999886

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.30  E-value=1.6e-12  Score=55.46  Aligned_cols=36  Identities=25%  Similarity=0.311  Sum_probs=22.7

Q ss_pred             CCCCCeecCccccccCCHHHHHHHHHHhcCCCCceE
Q psy12166         54 QGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVV   89 (94)
Q Consensus        54 ~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C   89 (94)
                      +++++|.|.+|++.|.....|..|+++|.+++||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            445566666666666666666666666666666654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.4e-13  Score=66.81  Aligned_cols=66  Identities=18%  Similarity=0.325  Sum_probs=54.1

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCC----CCccccccccccCChHHHHhHHHhhcCCCCCeecCcccccc
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRT----KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTF   68 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~----~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f   68 (94)
                      |.|..|+..|.....+ ..|+..+.++    ++|.|..|++.|.....|..|+ ..|.+++++.|..|+..+
T Consensus        16 ~~C~~C~~~f~~~~~l-~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           16 YACSHCDKTFRQKQLL-DMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA-DNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             EECSSSSCEESSHHHH-HHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHH-HHCCCCCSCCCCCCCCCC
T ss_pred             CcCCCCCCccCCHHHH-HHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHH-HHccCCCCcccCCCCCCC
Confidence            4688998888775544 4555554443    7999999999999999999999 789999999999998765

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.26  E-value=4.5e-13  Score=61.68  Aligned_cols=55  Identities=11%  Similarity=0.186  Sum_probs=47.3

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      |.|..|+..|.....+ ..|++.|.++++|.|..|++.|.....|..|+ ..|.+++
T Consensus         2 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~k   56 (57)
T 1bbo_A            2 YICEECGIRXKKPSML-KKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM-KSKAHSK   56 (57)
T ss_dssp             CBCTTTCCBCSSHHHH-HHHHHHTSSCCCEECSSSSCEESSHHHHHHHH-HSSSSCC
T ss_pred             CcCCCCcCcCCCHHHH-HHHHHhcCCCCCccCCCCCchhcCHHHHHHHH-HHhcccC
Confidence            5799999988875554 56788899999999999999999999999999 6787764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=4.5e-12  Score=56.48  Aligned_cols=40  Identities=25%  Similarity=0.578  Sum_probs=37.3

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .+..+++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGP   45 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCC
Confidence            4677899999999999999999999999999999999974

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=9.3e-12  Score=59.33  Aligned_cols=41  Identities=20%  Similarity=0.400  Sum_probs=26.9

Q ss_pred             cCCCCCCccccc--cccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         23 RFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        23 ~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      ..++++||.|..  |++.|....+|..|++++|++++|+.|..
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            345667777754  77777777777777534677777766653

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=3.1e-12  Score=62.32  Aligned_cols=67  Identities=16%  Similarity=0.155  Sum_probs=58.3

Q ss_pred             CCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         15 GIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        15 ~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      ..+..|+.++.+++|+.|..|++.|. ...|..|+  .+.+++++.|+.|++.|.. ..|..|+.++.+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~--~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE--DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH--HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH--hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            34567888899999999999999995 88899997  4788999999999998885 77999999988765

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.8e-12  Score=55.95  Aligned_cols=41  Identities=32%  Similarity=0.548  Sum_probs=38.3

Q ss_pred             hhcCCCCCeecC--ccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         51 SAHQGHPSVTCN--VCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        51 ~~h~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      +.|+++++|.|.  .|++.|.....|..|+++|.+++||+|+.
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            578899999998  89999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.21  E-value=9.1e-12  Score=56.81  Aligned_cols=44  Identities=16%  Similarity=0.258  Sum_probs=39.7

Q ss_pred             CCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCe
Q psy12166         15 GIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSV   59 (94)
Q Consensus        15 ~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~   59 (94)
                      ..+..|++.|.++++|.|..|++.|.....|..|+ ..|+++++|
T Consensus        10 ~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   53 (54)
T 1yui_A           10 PGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHL-ELRHFAKPG   53 (54)
T ss_dssp             SCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHH-HHHTTTSCC
T ss_pred             cchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHH-HHhccCCCC
Confidence            34567889999999999999999999999999999 789999876

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=1.2e-12  Score=66.09  Aligned_cols=58  Identities=14%  Similarity=0.149  Sum_probs=46.2

Q ss_pred             CCCCccccccCCCCCCCCccc-CCCCCC--------ccccccccccCChHHHHhHHHhhcCCCCCeecC
Q psy12166          3 CGWKKTAYEIGLGIPAEPLFR-FDRTKP--------HSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCN   62 (94)
Q Consensus         3 C~~~~~~~~~~~~~~~~~~~~-h~~~~~--------~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~   62 (94)
                      |..|+..|.....+ ..|++. |.++++        |.|..|++.|.....|..|+ ..|+++++|.|.
T Consensus        28 C~~C~k~f~~~~~L-~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   94 (95)
T 2ej4_A           28 KKSCDRTFSTMHEL-VTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKSGPSS   94 (95)
T ss_dssp             CCCCCCCCSSHHHH-HHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH-HHHHTCCCCSSC
T ss_pred             ccccccccCCHHHH-HHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            44556555554333 456776 888777        99999999999999999999 789999999986

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=1e-12  Score=61.08  Aligned_cols=55  Identities=22%  Similarity=0.410  Sum_probs=46.7

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCC
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      |.|..|+..|.....+ ..|++.|.++++|.|+.|++.|.....|..|++..|.++
T Consensus         3 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            3 FVCEVCTRAFARQEHL-KRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             BCCTTTCCCBSCHHHH-HHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCCCCccccCCHHHH-HHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5799999888875554 567888999999999999999999999999975678764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=5.9e-13  Score=63.80  Aligned_cols=57  Identities=14%  Similarity=0.163  Sum_probs=48.3

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCe
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSV   59 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~   59 (94)
                      |.|..|+..|.....+ ..|++.|.++++|.|.+|++.|.....|..|+ ..|.++++.
T Consensus        10 ~~C~~C~k~f~~~~~L-~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~p~   66 (70)
T 1x5w_A           10 EKCSECSYSCSSKAAL-RIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM-KKFHGDMSG   66 (70)
T ss_dssp             EECSSSSCEESSHHHH-HHHHGGGCCSCSEECSSSSCEESSHHHHHHHH-HHHHSSSCC
T ss_pred             eECCCCCcccCCHHHH-HHHHHHcCCCCCEeCCCCCCccCCHHHHHHHH-HHHhCCCCC
Confidence            4689999888875554 57788899999999999999999999999999 678777654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=3.4e-11  Score=57.39  Aligned_cols=39  Identities=15%  Similarity=0.082  Sum_probs=35.3

Q ss_pred             hcCCCCCeecCc--cccccCCHHHHHHHH-HHhcCCCCceEe
Q psy12166         52 AHQGHPSVTCNV--CGRTFSSIANLAEHK-RSRHGITGFVVS   90 (94)
Q Consensus        52 ~h~~~~~~~c~~--C~~~f~~~~~l~~h~-~~~~~~k~~~C~   90 (94)
                      .+++++||.|..  |++.|...++|..|+ ++|+++|||.|-
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            467899999975  999999999999997 689999999984

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1e-12  Score=63.19  Aligned_cols=55  Identities=13%  Similarity=0.132  Sum_probs=48.0

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCcc
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVC   64 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C   64 (94)
                      |.|..|+..|.....+..        +++|.|..|++.|.....|..|+ ..|.++++|.|.+|
T Consensus        19 ~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           19 QKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDE-GNESGKKTSGPSSG   73 (73)
T ss_dssp             EECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCS-SCCCCCCCSSCCCC
T ss_pred             eeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHH-HhhcCCCCCCCCCC
Confidence            468899998887666543        68999999999999999999999 78999999999887

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.7e-11  Score=51.47  Aligned_cols=33  Identities=24%  Similarity=0.436  Sum_probs=17.4

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      |+++++|.|..|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            444555555555555555555555555555544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.17  E-value=4.4e-11  Score=49.48  Aligned_cols=33  Identities=30%  Similarity=0.583  Sum_probs=18.1

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      |+++++|.|..|++.|.....|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            344555555555555555555555555555544

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.16  E-value=3.6e-11  Score=49.39  Aligned_cols=32  Identities=16%  Similarity=0.239  Sum_probs=22.4

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhcCCCCce
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRHGITGFV   88 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~   88 (94)
                      +||.|.+|++.|.....|..|+++|.++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            35677777777777777777777777777664

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.1e-11  Score=61.99  Aligned_cols=52  Identities=17%  Similarity=0.165  Sum_probs=46.2

Q ss_pred             ccCChHHHHhHHHhhcCCCCCeecCcccccc-CCHHHHHHHHHHhcCCCCceEee
Q psy12166         38 TYTLAKHLWGHVKSAHQGHPSVTCNVCGRTF-SSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        38 ~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f-~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|.....|..|+ ..+.++++|.|..|++.| .....|..|+++| ++++|.|+.
T Consensus        15 ~~~~~~~~~~~~-~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~   67 (96)
T 2ctd_A           15 VYAAGSLEEQWY-LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHH   67 (96)
T ss_dssp             SSCTTCHHHHHH-HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSS
T ss_pred             CCCCchHHHHHH-HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCC
Confidence            456667788888 678889999999999999 9999999999999 999999964

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=5.3e-13  Score=66.97  Aligned_cols=65  Identities=11%  Similarity=0.059  Sum_probs=50.2

Q ss_pred             CCCCCCCcccCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         14 LGIPAEPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        14 ~~~~~~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      ..+...+..+|.+++||.|..|++.|.....|..|+ ..|+++++|.|..|.    ....|..|.++|.|
T Consensus        10 r~~~~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           10 RDFIILGNGPRLQNSTYQCKHCDSKLQSTAELTSHL-NIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCCCCCCSCCCCSCEECSSSCCEESSHHHHHHHH-HHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cceeeccccccCCCCCCcCCCCCCEeCCHHHHHHHH-HHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            334445567789999999999999999999999998 789999999997654    33344455666665

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=4e-11  Score=50.30  Aligned_cols=37  Identities=16%  Similarity=0.300  Sum_probs=32.8

Q ss_pred             cccCCCCCCccccccccccCChHHHHhHHHhhcCCCCC
Q psy12166         21 LFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPS   58 (94)
Q Consensus        21 ~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~   58 (94)
                      ++.|.+++||.|..|++.|.....|..|+ ..|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHI-KTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHH-HHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHH-HHHcCCCC
Confidence            35788999999999999999999999999 78888764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.15  E-value=7.4e-11  Score=49.45  Aligned_cols=35  Identities=23%  Similarity=0.345  Sum_probs=22.6

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcCC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      |++.|.+++||.|+.|++.|.....|..|+ ..|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHH-GGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHH-HHhcc
Confidence            455666666677777777776666666666 45544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.14  E-value=6.1e-11  Score=49.10  Aligned_cols=33  Identities=24%  Similarity=0.493  Sum_probs=17.0

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      |+++++|.|.+|++.|.....|..|+++|.+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            344455555555555555555555555555444

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.14  E-value=4.5e-11  Score=50.80  Aligned_cols=37  Identities=19%  Similarity=0.419  Sum_probs=33.1

Q ss_pred             CCCCCCccccccccccCChHHHHhHHHhhcCCCCCeec
Q psy12166         24 FDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTC   61 (94)
Q Consensus        24 h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c   61 (94)
                      |.++++|.|..|++.|.....|..|+ ..|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHM-NVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHH-HTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHH-HHcCCCcccee
Confidence            46789999999999999999999999 78999998865

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=5.5e-11  Score=57.12  Aligned_cols=41  Identities=27%  Similarity=0.535  Sum_probs=38.4

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .+|+++++|.|.+|++.|.....|..|+++|.++++|+|+.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~   47 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLE   47 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCC
Confidence            57889999999999999999999999999999999999964

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=4.6e-11  Score=54.43  Aligned_cols=40  Identities=18%  Similarity=0.291  Sum_probs=36.6

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHH-HhcCCCCceEee
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKR-SRHGITGFVVSA   91 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~-~~~~~k~~~C~~   91 (94)
                      .+.++++|.|.+|++.|.....|..|++ +|.+++||+|+.
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~   46 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   46 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCC
Confidence            4677899999999999999999999997 899999999864

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.8e-12  Score=64.45  Aligned_cols=53  Identities=9%  Similarity=0.076  Sum_probs=45.9

Q ss_pred             ccCChHHHHhHHHhhcCCCCCeecCccccccC-CHHHHHHHHHHhcC-CCCceEee
Q psy12166         38 TYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFS-SIANLAEHKRSRHG-ITGFVVSA   91 (94)
Q Consensus        38 ~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~-~~~~l~~h~~~~~~-~k~~~C~~   91 (94)
                      .+.....+..|+ ..|.++++|.|.+|++.|. ....|..|+++|++ +++|+|+.
T Consensus         5 s~~~~~~~~~h~-~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~   59 (98)
T 2gqj_A            5 SSGPGGPEEQWQ-RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQH   59 (98)
T ss_dssp             CCCCCCSCSHHH-HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS
T ss_pred             CCCCCCcHHHHH-HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCC
Confidence            344445577898 7899999999999999999 99999999999998 99999863

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.10  E-value=4.3e-11  Score=50.21  Aligned_cols=36  Identities=25%  Similarity=0.469  Sum_probs=32.9

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      |+ ..|+++++|.|+.|++.|.....|..|+++|.++
T Consensus         2 H~-~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 ST-RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CS-STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CC-CcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            55 6799999999999999999999999999999874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=99.10  E-value=2.2e-11  Score=51.25  Aligned_cols=25  Identities=32%  Similarity=0.543  Sum_probs=15.0

Q ss_pred             CCCCCeecCccccccCCHHHHHHHH
Q psy12166         54 QGHPSVTCNVCGRTFSSIANLAEHK   78 (94)
Q Consensus        54 ~~~~~~~c~~C~~~f~~~~~l~~h~   78 (94)
                      .+++||.|..|+++|...++|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4455666666666666666666555

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=1.4e-10  Score=48.86  Aligned_cols=35  Identities=26%  Similarity=0.473  Sum_probs=24.9

Q ss_pred             cCCCCCeecC--ccccccCCHHHHHHHHHHhcCCCCc
Q psy12166         53 HQGHPSVTCN--VCGRTFSSIANLAEHKRSRHGITGF   87 (94)
Q Consensus        53 h~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~k~~   87 (94)
                      |+++++|.|.  .|++.|.....|..|+++|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4556677777  4777777777777777777777766

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=1.7e-11  Score=59.61  Aligned_cols=46  Identities=15%  Similarity=0.265  Sum_probs=39.9

Q ss_pred             HHhHHHhhcCCCCCeecCccccccCCHHHHHHHHH-HhcCC-CCceEee
Q psy12166         45 LWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR-SRHGI-TGFVVSA   91 (94)
Q Consensus        45 l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~-~~~~~-k~~~C~~   91 (94)
                      +.+|+ ..|+++++|.|.+|++.|.....|..|++ .|.++ ++|+|+.
T Consensus         3 ~~~H~-~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~   50 (77)
T 2ct1_A            3 SGSSG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPH   50 (77)
T ss_dssp             CCCCC-CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSS
T ss_pred             CCccc-cccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCC
Confidence            45687 78999999999999999999999999997 56664 8999964

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.08  E-value=8.7e-11  Score=53.80  Aligned_cols=37  Identities=30%  Similarity=0.492  Sum_probs=31.6

Q ss_pred             CCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         55 GHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        55 ~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ++++|.|.+|++.|.....|..|+++|.+++||+|+.
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   37 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEF   37 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSS
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCC
Confidence            3578999999999999999999999999999999963

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.07  E-value=1.7e-10  Score=47.62  Aligned_cols=35  Identities=20%  Similarity=0.362  Sum_probs=31.0

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCCC
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPS   58 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~   58 (94)
                      +|.++++|.|..|++.|.....|..|+ ..|.+++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHI-REVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHH-HHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHH-HHHcCCCC
Confidence            367889999999999999999999999 68887764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.06  E-value=1.9e-10  Score=47.59  Aligned_cols=35  Identities=20%  Similarity=0.393  Sum_probs=31.2

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCCC
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPS   58 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~   58 (94)
                      +|.++++|.|..|++.|.....|..|+ ..|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHL-KVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHH-GGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHH-HHcCCCCC
Confidence            467889999999999999999999999 78988764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=9.3e-11  Score=56.33  Aligned_cols=48  Identities=21%  Similarity=0.315  Sum_probs=40.3

Q ss_pred             HHHhHHHhhcCCCCCeecC--ccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         44 HLWGHVKSAHQGHPSVTCN--VCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        44 ~l~~H~~~~h~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .+..|++..+.++++|.|+  .|++.|.....|..|+++|.++++|.|+.
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~   54 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI   54 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC
Confidence            4555665678899999997  59999999999999999999999999963

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=3.7e-10  Score=46.88  Aligned_cols=32  Identities=25%  Similarity=0.332  Sum_probs=17.7

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      |.++++|.|.+|++.|.....|..|+++|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44555555555555555555555555555544

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.03  E-value=1.4e-11  Score=65.32  Aligned_cols=61  Identities=20%  Similarity=0.211  Sum_probs=50.7

Q ss_pred             CCCccccccccccC------ChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         27 TKPHSCDLCGKTYT------LAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        27 ~~~~~c~~c~~~f~------~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ++.+.|.+|++.|.      ....|..|+  .|+++++|.|.+|++.|.....|..|+++|  ++||+|+.
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~  105 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV  105 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTT
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCC
Confidence            45677888776554      567777776  488899999999999999999999999998  89999863

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=3.3e-10  Score=47.13  Aligned_cols=32  Identities=19%  Similarity=0.303  Sum_probs=16.0

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      |+++++|.|.+|++.|.....|..|+++|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            44444555555555555555555555554443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=4.5e-10  Score=46.63  Aligned_cols=32  Identities=25%  Similarity=0.475  Sum_probs=17.7

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      |.++++|.|.+|++.|.....|..|+++|.++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            44455555555555555555555555555544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=2.7e-10  Score=47.66  Aligned_cols=33  Identities=18%  Similarity=0.418  Sum_probs=18.6

Q ss_pred             hcCCCCCeecCccccccCCH-HHHHHHHHHhcCC
Q psy12166         52 AHQGHPSVTCNVCGRTFSSI-ANLAEHKRSRHGI   84 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~-~~l~~h~~~~~~~   84 (94)
                      +|.++++|.|..|++.|... ..|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            34555555555555555555 5555555555554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=8.6e-11  Score=55.40  Aligned_cols=41  Identities=20%  Similarity=0.513  Sum_probs=37.0

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHHHHH-h-cCCCCceEee
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEHKRS-R-HGITGFVVSA   91 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~-~-~~~k~~~C~~   91 (94)
                      ..|+++++|.|..|++.|.....|..|+++ | .++++|+|+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~   45 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF   45 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC
Confidence            568889999999999999999999999998 6 5899999863

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2e-10  Score=55.85  Aligned_cols=40  Identities=25%  Similarity=0.447  Sum_probs=36.5

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcC---CCCceEee
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG---ITGFVVSA   91 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~---~k~~~C~~   91 (94)
                      .|+++++|.|.+|++.|.....|..|+++|.+   +++|.|+.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~   43 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF   43 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCC
Confidence            37889999999999999999999999999986   89999863

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=5.4e-10  Score=47.45  Aligned_cols=32  Identities=13%  Similarity=0.263  Sum_probs=18.1

Q ss_pred             cCCCCCeecCc--cccccCCHHHHHHHHHHhcCC
Q psy12166         53 HQGHPSVTCNV--CGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        53 h~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +.+++||.|..  |++.|.....|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            44555566654  666666666666666555543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.5e-10  Score=47.45  Aligned_cols=33  Identities=15%  Similarity=0.158  Sum_probs=19.6

Q ss_pred             ccCCCCCCccccccccccCChHHHHhH-HHhhcCC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGH-VKSAHQG   55 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H-~~~~h~~   55 (94)
                      ++|.+++||.|..|++.|.....|..| + ..|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVI-QKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHH-HHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHH-HHccC
Confidence            345556666666666666666666666 4 45543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=4.6e-10  Score=46.67  Aligned_cols=31  Identities=13%  Similarity=0.205  Sum_probs=16.0

Q ss_pred             CCCCCCccccccccccCChHHHHhHHHhhcCC
Q psy12166         24 FDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        24 h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      |.+++||.|..|++.|.....|..|+ ..|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHM-LVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHH-TTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHH-HHhcC
Confidence            44445555555555555555555555 34443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=7.9e-10  Score=45.91  Aligned_cols=32  Identities=22%  Similarity=0.364  Sum_probs=19.2

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      |.++++|.|..|++.|.....|..|+++|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            44555666666666666666666666666554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=5.9e-11  Score=59.44  Aligned_cols=41  Identities=15%  Similarity=0.215  Sum_probs=38.3

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ..|+++++|.|.+|++.|.....|..|+++|.+++||+|..
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~   58 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR   58 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch
Confidence            46889999999999999999999999999999999999964

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.97  E-value=6.4e-10  Score=45.52  Aligned_cols=32  Identities=22%  Similarity=0.376  Sum_probs=29.5

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCCCCee
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVT   60 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~   60 (94)
                      +||.|..|++.|.....|..|+ ..|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHI-TLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHH-HHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHH-HHhCCCCCCC
Confidence            5899999999999999999999 7899998875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=9.7e-10  Score=45.64  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=30.8

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      +.|.+++||.|..|++.|.....|..|+ ..|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHM-NRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHH-HHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHH-HHhccCC
Confidence            3578899999999999999999999999 6887653

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.95  E-value=2.5e-11  Score=56.94  Aligned_cols=43  Identities=16%  Similarity=0.210  Sum_probs=37.2

Q ss_pred             HHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         45 LWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        45 l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      |..|+ ..|+++++|.|+.|++.|.....|.   ++|.+++||+|+.
T Consensus         2 L~~h~-~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~   44 (62)
T 1vd4_A            2 IETDE-RDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTF   44 (62)
T ss_dssp             CCCCS-SSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSS
T ss_pred             hhhHH-HHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCC
Confidence            34577 6899999999999999999988876   7899999999963

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=9.2e-10  Score=45.71  Aligned_cols=34  Identities=15%  Similarity=0.237  Sum_probs=31.3

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      .|.++++|.|.+|++.|.....|..|+++|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999998864

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=9.8e-10  Score=45.55  Aligned_cols=35  Identities=23%  Similarity=0.362  Sum_probs=30.7

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      ..|.+++||.|..|++.|.....|..|+ ..|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHL-RKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHH-HHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHH-HHccCCC
Confidence            3578889999999999999999999999 6887653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.92  E-value=9e-10  Score=48.92  Aligned_cols=32  Identities=41%  Similarity=0.695  Sum_probs=21.6

Q ss_pred             CCCCCCccccccccccCChHHHHhHHHh-hcCCC
Q psy12166         24 FDRTKPHSCDLCGKTYTLAKHLWGHVKS-AHQGH   56 (94)
Q Consensus        24 h~~~~~~~c~~c~~~f~~~~~l~~H~~~-~h~~~   56 (94)
                      |++++||.|.+|++.|.....|..|+ . .|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~-~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHY-AHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHH-HHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHh-hhhcCCC
Confidence            56667777777777777777777776 4 66654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=6.5e-10  Score=46.48  Aligned_cols=34  Identities=21%  Similarity=0.329  Sum_probs=30.2

Q ss_pred             ccCCCCCCccccccccccCCh-HHHHhHHHhhcCCC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLA-KHLWGHVKSAHQGH   56 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~-~~l~~H~~~~h~~~   56 (94)
                      ++|.+++||.|..|++.|... ..|..|+ ..|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~-~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHI-WAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHH-HHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHH-HhcCCC
Confidence            467889999999999999999 9999998 678765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.90  E-value=2.1e-09  Score=44.97  Aligned_cols=32  Identities=22%  Similarity=0.534  Sum_probs=20.1

Q ss_pred             cCCCCCeecCc--cccccCCHHHHHHHHHHhcCC
Q psy12166         53 HQGHPSVTCNV--CGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        53 h~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      |+++++|.|.+  |++.|...+.|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45566666663  666666666666666666654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=8.6e-10  Score=46.21  Aligned_cols=34  Identities=18%  Similarity=0.223  Sum_probs=30.8

Q ss_pred             hhcCCCCCeecCccccccCCHHHHHHH-HHHhcCC
Q psy12166         51 SAHQGHPSVTCNVCGRTFSSIANLAEH-KRSRHGI   84 (94)
Q Consensus        51 ~~h~~~~~~~c~~C~~~f~~~~~l~~h-~~~~~~~   84 (94)
                      ..|++++||.|..|++.|.....|..| +++|.++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            368899999999999999999999999 8888874

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=2.3e-11  Score=57.57  Aligned_cols=54  Identities=15%  Similarity=0.224  Sum_probs=43.7

Q ss_pred             CCCCCCccccccCCCCCCCCcccCCCCCCcccc-ccccccCChHHHHhHHHhhcCCCCC
Q psy12166          1 MDCGWKKTAYEIGLGIPAEPLFRFDRTKPHSCD-LCGKTYTLAKHLWGHVKSAHQGHPS   58 (94)
Q Consensus         1 ~~C~~~~~~~~~~~~~~~~~~~~h~~~~~~~c~-~c~~~f~~~~~l~~H~~~~h~~~~~   58 (94)
                      +.|..|+..|. ... +..|+++ .+++||.|+ .|++.|.....|..|+ ..|....+
T Consensus        11 ~~C~~C~k~f~-~~~-L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~-~~hc~~~~   65 (66)
T 2eod_A           11 QPCTYCTKEFV-FDT-IQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHL-KDSCNTAL   65 (66)
T ss_dssp             EECSSSCCEEE-HHH-HHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHH-HTTSSSCC
T ss_pred             eeccccCCccC-HHH-HHHHHHH-cCCcCccCCcccCcccccHHHHHHHH-HhhcccCc
Confidence            46888998888 443 4567777 889999999 9999999999999999 67765543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=8e-10  Score=46.46  Aligned_cols=35  Identities=29%  Similarity=0.483  Sum_probs=31.3

Q ss_pred             CCCCCCcccc--ccccccCChHHHHhHHHhhcCCCCCe
Q psy12166         24 FDRTKPHSCD--LCGKTYTLAKHLWGHVKSAHQGHPSV   59 (94)
Q Consensus        24 h~~~~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~~~   59 (94)
                      |.+++||.|.  .|++.|.....|..|+ ..|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHK-HKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHH-HHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHH-HHhCCCCCC
Confidence            5678999999  5999999999999999 789988876

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.2e-09  Score=44.43  Aligned_cols=34  Identities=29%  Similarity=0.490  Sum_probs=30.0

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      .|.++++|.|..|++.|.....|..|+ ..|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~-~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHK-LLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHH-HHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHH-HHhcCCC
Confidence            467889999999999999999999998 6887653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.7e-09  Score=45.90  Aligned_cols=33  Identities=15%  Similarity=0.152  Sum_probs=29.1

Q ss_pred             cCCCCCCccccc--cccccCChHHHHhHHHhhcCCC
Q psy12166         23 RFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        23 ~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      .+.+++||.|..  |++.|.....|..|+ +.|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~-r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHL-KVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHH-HHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence            357789999986  999999999999999 788875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.87  E-value=1.6e-09  Score=48.12  Aligned_cols=35  Identities=17%  Similarity=0.437  Sum_probs=29.7

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHH-HhcCCCC
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKR-SRHGITG   86 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~-~~~~~k~   86 (94)
                      +|+++++|.|.+|++.|.....|..|++ +|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4788999999999999999999999999 8988754

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.84  E-value=3.7e-09  Score=41.74  Aligned_cols=28  Identities=25%  Similarity=0.521  Sum_probs=16.0

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      ++|.|..|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4555555665566555555555555554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=3.2e-09  Score=44.01  Aligned_cols=34  Identities=21%  Similarity=0.463  Sum_probs=29.7

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      .|.++++|.|..|++.|.....|..|+ ..|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHL-RIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHH-HHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHH-HHhCCCC
Confidence            456789999999999999999999999 6887653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.84  E-value=1.6e-09  Score=45.46  Aligned_cols=26  Identities=19%  Similarity=0.374  Sum_probs=24.3

Q ss_pred             CCCCCCccccccccccCChHHHHhHH
Q psy12166         24 FDRTKPHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        24 h~~~~~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      +.+++||.|..|++.|....+|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46789999999999999999999997

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.81  E-value=6.4e-09  Score=40.75  Aligned_cols=27  Identities=37%  Similarity=0.664  Sum_probs=15.6

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +|.|..|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455555666666655565665555554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.81  E-value=6.7e-11  Score=48.20  Aligned_cols=30  Identities=17%  Similarity=0.307  Sum_probs=17.5

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCe
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSV   59 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~   59 (94)
                      ||.|..|++.|.....|..|+ ..|+++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHI-KTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSST-TSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHH-HHHccCCCC
Confidence            556666666666666666665 455555543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.81  E-value=3.8e-09  Score=41.48  Aligned_cols=27  Identities=19%  Similarity=0.336  Sum_probs=16.7

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +|.|..|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            556666666666666666666666554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.79  E-value=6.9e-09  Score=40.62  Aligned_cols=28  Identities=32%  Similarity=0.723  Sum_probs=19.9

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      +|.|..|++.|.....|..|+++|.+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            5677777777777777777777776653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.78  E-value=3.9e-10  Score=49.85  Aligned_cols=32  Identities=22%  Similarity=0.357  Sum_probs=15.7

Q ss_pred             cCCCCCCcccc--ccccccCChHHHHhHHHhhcCC
Q psy12166         23 RFDRTKPHSCD--LCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        23 ~h~~~~~~~c~--~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      .|.+++||.|.  .|++.|.....|..|+ ..|++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~-~~H~~   45 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHI-QTHLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHH-HHHTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHH-HHccC
Confidence            34445555553  3555555555555554 34443

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.77  E-value=7.6e-09  Score=40.76  Aligned_cols=28  Identities=21%  Similarity=0.468  Sum_probs=16.7

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      +|.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4556666666666666666666665544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.76  E-value=1.1e-08  Score=48.88  Aligned_cols=39  Identities=28%  Similarity=0.502  Sum_probs=35.5

Q ss_pred             hcCCCCCeecCc--cccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         52 AHQGHPSVTCNV--CGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        52 ~h~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      .....++|.|..  |++.|.....|..|+++|.++++|+|+
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   51 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCS   51 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCC
Confidence            355678999998  999999999999999999999999995

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.75  E-value=6.7e-09  Score=40.60  Aligned_cols=27  Identities=22%  Similarity=0.498  Sum_probs=17.4

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            566666666666666666666666654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=1.3e-08  Score=48.20  Aligned_cols=35  Identities=29%  Similarity=0.441  Sum_probs=28.8

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      ..+.+++||.|..|++.|.....|..|+ +.|+++.
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~-r~Htg~~   40 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHE-AQHGVTS   40 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHH-HHHTTTS
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhh-hhhCCCc
Confidence            3467788999999999999999999998 6788753

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.74  E-value=1.1e-08  Score=41.12  Aligned_cols=27  Identities=26%  Similarity=0.582  Sum_probs=12.8

Q ss_pred             CeecC--ccccccCCHHHHHHHHHHhcCC
Q psy12166         58 SVTCN--VCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        58 ~~~c~--~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +|.|.  .|++.|.....|..|+++|.++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            44444  4444444444444444444443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.74  E-value=9.9e-09  Score=41.01  Aligned_cols=27  Identities=33%  Similarity=0.769  Sum_probs=13.3

Q ss_pred             CeecC--ccccccCCHHHHHHHHHHhcCC
Q psy12166         58 SVTCN--VCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        58 ~~~c~--~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      ||.|.  .|++.|.....|..|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            34444  4555555555555555554443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.73  E-value=6.5e-09  Score=43.41  Aligned_cols=33  Identities=36%  Similarity=0.739  Sum_probs=29.0

Q ss_pred             cCCCCCCccccc--cccccCChHHHHhHHHhhcCCC
Q psy12166         23 RFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        23 ~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      .|++++||.|.+  |++.|.....|..|+ ..|+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHL-RWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHH-HHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence            467889999995  999999999999998 678765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.71  E-value=6.3e-10  Score=45.18  Aligned_cols=31  Identities=16%  Similarity=0.427  Sum_probs=28.8

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhcCCCCc
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRHGITGF   87 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~   87 (94)
                      +||.|..|++.|...+.|..|+++|.+++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4799999999999999999999999999987

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.68  E-value=3.2e-09  Score=46.85  Aligned_cols=38  Identities=16%  Similarity=0.242  Sum_probs=33.2

Q ss_pred             hHHHhhcCCCCCeecC--ccccccCCHHHHHHHHHHhcCCC
Q psy12166         47 GHVKSAHQGHPSVTCN--VCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~--~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      .|. ..|+++++|.|.  .|++.|.....|..|+++|.|++
T Consensus         8 ~~~-~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKY-VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGS-CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHH-hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344 468999999996  79999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.68  E-value=1.6e-08  Score=39.35  Aligned_cols=22  Identities=36%  Similarity=0.901  Sum_probs=11.8

Q ss_pred             CCccccccccccCChHHHHhHH
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      +||.|..|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~   23 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHY   23 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHHH
Confidence            3455555555555555555554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=2.2e-09  Score=42.26  Aligned_cols=27  Identities=30%  Similarity=0.731  Sum_probs=14.2

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +|.|..|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            445555555555555555555555443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.67  E-value=2e-08  Score=39.45  Aligned_cols=29  Identities=28%  Similarity=0.692  Sum_probs=26.0

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      ++||.|..|++.|.....|..|+ ..|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~-~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHL-ETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHH-HHhccC
Confidence            47899999999999999999999 678765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=2.8e-09  Score=42.17  Aligned_cols=27  Identities=30%  Similarity=0.532  Sum_probs=14.0

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            455555555555555555555555443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.65  E-value=2.7e-08  Score=38.39  Aligned_cols=22  Identities=32%  Similarity=0.561  Sum_probs=11.8

Q ss_pred             CCccccccccccCChHHHHhHH
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      +||.|..|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~   23 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHL   23 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHH
Confidence            3455555555555555555554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.65  E-value=2.9e-08  Score=47.02  Aligned_cols=35  Identities=17%  Similarity=0.420  Sum_probs=31.6

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCCCC
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITG   86 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~   86 (94)
                      .+..++||.|..|++.|.....|..|+++|+++..
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            46778999999999999999999999999998653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.64  E-value=3.2e-08  Score=38.63  Aligned_cols=28  Identities=21%  Similarity=0.647  Sum_probs=25.1

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      +||.|..|++.|.....|..|+ ..|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHY-RSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHH-HHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHH-HHhcCC
Confidence            4799999999999999999998 678765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.62  E-value=2.1e-08  Score=38.82  Aligned_cols=22  Identities=23%  Similarity=0.493  Sum_probs=12.5

Q ss_pred             CCccccccccccCChHHHHhHH
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      +||.|..|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~   23 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHM   23 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHH
T ss_pred             cCcCCCCCCcccCCHHHHHHHH
Confidence            4555555555555555555555

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.61  E-value=2.4e-08  Score=38.39  Aligned_cols=24  Identities=25%  Similarity=0.573  Sum_probs=12.3

Q ss_pred             ccccccccccCChHHHHhHHHhhcC
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      |.|..|++.|.....|..|+ ..|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~-~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQ-RVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG-GGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHH-HHcC
Confidence            45555555555555555554 3443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.61  E-value=2.3e-08  Score=39.08  Aligned_cols=28  Identities=25%  Similarity=0.474  Sum_probs=25.2

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      +||.|..|++.|.....|..|+ ..|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHI-LLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHH-TGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHH-HHhcCC
Confidence            5799999999999999999999 678765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.61  E-value=3.5e-08  Score=38.04  Aligned_cols=27  Identities=15%  Similarity=0.500  Sum_probs=24.5

Q ss_pred             CCCeecCccccccCCHHHHHHHHHHhc
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      +++|.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999998874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.61  E-value=1.8e-08  Score=39.74  Aligned_cols=27  Identities=30%  Similarity=0.671  Sum_probs=14.1

Q ss_pred             CccccccccccCChHHHHhHHHhhcCC
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      ||.|..|++.|.....|..|+...|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            455555555555555555552134444

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.61  E-value=5.5e-08  Score=38.96  Aligned_cols=29  Identities=34%  Similarity=0.647  Sum_probs=26.0

Q ss_pred             CCCcccc--ccccccCChHHHHhHHHhhcCCC
Q psy12166         27 TKPHSCD--LCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        27 ~~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      ++||.|.  .|++.|.....|..|+ ..|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHK-KSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHH-GGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHH-HHccCC
Confidence            4789999  8999999999999999 788875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.60  E-value=2.5e-08  Score=38.57  Aligned_cols=27  Identities=22%  Similarity=0.500  Sum_probs=24.3

Q ss_pred             CCCeecCccccccCCHHHHHHHHHHhc
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      ++||.|..|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999998763

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.59  E-value=3.8e-08  Score=38.20  Aligned_cols=28  Identities=32%  Similarity=0.680  Sum_probs=25.4

Q ss_pred             CCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      +++|.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999998864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.59  E-value=5.7e-08  Score=38.67  Aligned_cols=29  Identities=34%  Similarity=0.761  Sum_probs=25.6

Q ss_pred             CCcccc--ccccccCChHHHHhHHHhhcCCCC
Q psy12166         28 KPHSCD--LCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        28 ~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      +||.|.  .|++.|.....|..|+ ..|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHH-HHhcCCC
Confidence            479998  9999999999999999 7888753

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.56  E-value=6e-08  Score=38.02  Aligned_cols=29  Identities=17%  Similarity=0.340  Sum_probs=25.5

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      ++|.|..|++.|.....|..|+ ..|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHI-KTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHH-HHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHH-HHHccCC
Confidence            4799999999999999999998 6777654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.53  E-value=7.6e-08  Score=37.83  Aligned_cols=29  Identities=24%  Similarity=0.557  Sum_probs=25.9

Q ss_pred             CCeecCccccccCCHHHHHHH-HHHhcCCC
Q psy12166         57 PSVTCNVCGRTFSSIANLAEH-KRSRHGIT   85 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h-~~~~~~~k   85 (94)
                      ++|.|..|++.|.....|..| +++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            479999999999999999999 68888864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.52  E-value=4e-08  Score=38.27  Aligned_cols=28  Identities=36%  Similarity=0.731  Sum_probs=25.0

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      +||.|..|++.|.....|..|+ ..|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHL-RIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHH-HHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHH-HHhcCC
Confidence            4799999999999999999998 678765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.52  E-value=4.4e-08  Score=38.11  Aligned_cols=28  Identities=29%  Similarity=0.595  Sum_probs=24.9

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      +||.|..|++.|.....|..|+ ..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHL-KIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHH-HHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHH-HHhccC
Confidence            5899999999999999999998 677765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.51  E-value=1.1e-07  Score=36.46  Aligned_cols=27  Identities=26%  Similarity=0.645  Sum_probs=23.7

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +|.|..|++.|.....|..|+++|.++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            588999999999999999999998864

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.89  E-value=1.4e-08  Score=39.80  Aligned_cols=28  Identities=46%  Similarity=0.904  Sum_probs=24.9

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      +||.|..|++.|.....|..|+ ..|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHV-RQHTGE   28 (29)
Confidence            4799999999999999999998 678765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1.8e-08  Score=39.71  Aligned_cols=29  Identities=31%  Similarity=0.550  Sum_probs=25.4

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      ++||.|..|++.|.....|..|+ ..|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~-~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHV-RIHTGE   29 (30)
Confidence            36899999999999999999998 677764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=2.9e-08  Score=37.95  Aligned_cols=21  Identities=33%  Similarity=0.846  Sum_probs=12.1

Q ss_pred             CccccccccccCChHHHHhHH
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      ||.|..||+.|.....|..|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~   22 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHI   22 (26)
Confidence            455555555555555555555

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.40  E-value=2.6e-07  Score=35.86  Aligned_cols=25  Identities=32%  Similarity=0.712  Sum_probs=12.8

Q ss_pred             CeecC--ccccccCCHHHHHHHHHHhc
Q psy12166         58 SVTCN--VCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        58 ~~~c~--~C~~~f~~~~~l~~h~~~~~   82 (94)
                      +|.|.  .|++.|.....|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            34555  55555555555555555443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=4.3e-08  Score=37.44  Aligned_cols=26  Identities=31%  Similarity=0.675  Sum_probs=23.4

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhc
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      +||.|..|++.|.....|..|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47999999999999999999998763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=2.9e-08  Score=48.09  Aligned_cols=45  Identities=22%  Similarity=0.282  Sum_probs=39.3

Q ss_pred             HHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         44 HLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        44 ~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      .|..|+ ..+.+.+++.|..|++.|. ...|..|+ .+.+++||.|..
T Consensus         4 ~L~~H~-~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~   48 (75)
T 2d9k_A            4 GSSGHE-ETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGN   48 (75)
T ss_dssp             CCSCCC-CCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSS
T ss_pred             HHHhhC-cccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEccc
Confidence            466787 6789999999999999995 88899999 899999999863

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.26  E-value=6.8e-06  Score=38.50  Aligned_cols=50  Identities=18%  Similarity=0.301  Sum_probs=42.4

Q ss_pred             ccccccccCChHHHHhHHHhhcCCCC------CeecC--ccccccCCHHHHHHHHHHh
Q psy12166         32 CDLCGKTYTLAKHLWGHVKSAHQGHP------SVTCN--VCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        32 c~~c~~~f~~~~~l~~H~~~~h~~~~------~~~c~--~C~~~f~~~~~l~~h~~~~   81 (94)
                      +..|++.|.....|..|+...|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            34699999999999999866787665      79997  6999999999999998875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.23  E-value=8e-07  Score=34.36  Aligned_cols=26  Identities=23%  Similarity=0.489  Sum_probs=23.3

Q ss_pred             CCcccc--ccccccCChHHHHhHHHhhcC
Q psy12166         28 KPHSCD--LCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        28 ~~~~c~--~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      ++|.|.  .|++.|.....|..|+ ..|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~-~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHK-KIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHH-GGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHH-HHhC
Confidence            478999  9999999999999998 6775

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.59  E-value=5.8e-06  Score=38.74  Aligned_cols=51  Identities=16%  Similarity=0.348  Sum_probs=34.9

Q ss_pred             CCCCCCcccccc--CCCCCCCCc-ccCCCCC------Ccccc--ccccccCChHHHHhHHHhh
Q psy12166          1 MDCGWKKTAYEI--GLGIPAEPL-FRFDRTK------PHSCD--LCGKTYTLAKHLWGHVKSA   52 (94)
Q Consensus         1 ~~C~~~~~~~~~--~~~~~~~~~-~~h~~~~------~~~c~--~c~~~f~~~~~l~~H~~~~   52 (94)
                      |.|.|.++....  ...+ ..|+ ..|.+.+      +|.|.  .|+..+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l-~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDL-QRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHH-HHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHH-HHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            579996555443  3333 3444 4676544      78997  7999999899999999543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.39  E-value=3.2e-05  Score=40.75  Aligned_cols=27  Identities=19%  Similarity=0.357  Sum_probs=15.3

Q ss_pred             cCCCCCCccccccccccCChHHHHhHH
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      .|+|+++|.|..|++.|.+...|..|+
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~   70 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHF   70 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHH
Confidence            345555566656666666555555554

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.28  E-value=6.6e-05  Score=39.57  Aligned_cols=26  Identities=38%  Similarity=0.566  Sum_probs=22.9

Q ss_pred             CCCCeecCccccccCCHHHHHHHHHH
Q psy12166         55 GHPSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus        55 ~~~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      ++++|.|..|++.|.+...|..|+++
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCcceEcccCcchhCCHHHHHHHHhh
Confidence            34589999999999999999999764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.99  E-value=0.0017  Score=34.31  Aligned_cols=52  Identities=27%  Similarity=0.429  Sum_probs=41.4

Q ss_pred             CCccccccccccCChHHHHhHHHh-hc-------------------------------CCCCCeecCccccccCCHHHHH
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKS-AH-------------------------------QGHPSVTCNVCGRTFSSIANLA   75 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~-~h-------------------------------~~~~~~~c~~C~~~f~~~~~l~   75 (94)
                      +++.|.+|...|.+...+..|... .|                               .....|.|..|.+.|.....+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            678999999999999888888621 11                               1234678999999999999999


Q ss_pred             HHHH
Q psy12166         76 EHKR   79 (94)
Q Consensus        76 ~h~~   79 (94)
                      .|..
T Consensus       111 ~H~~  114 (127)
T 1zu1_A          111 SHYI  114 (127)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            8865

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.72  E-value=0.00074  Score=29.37  Aligned_cols=23  Identities=22%  Similarity=0.557  Sum_probs=20.0

Q ss_pred             CCccccccccccCChHHHHhHHH
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVK   50 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~   50 (94)
                      .+|.|+.|+..|.....|..||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            57889999999999999999984

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.61  E-value=0.0041  Score=27.04  Aligned_cols=24  Identities=21%  Similarity=0.332  Sum_probs=21.9

Q ss_pred             CCeecCccccccCCHHHHHHHHHH
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      -++.|+.|++.|.....|..|+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            578999999999999999999983

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.80  E-value=0.0069  Score=33.30  Aligned_cols=57  Identities=14%  Similarity=0.271  Sum_probs=39.1

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCCCCc
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGITGF   87 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~   87 (94)
                      .+..|+.|+..+. ...|..|+ ...-..+...|+.|+..+... .+..|..+..|+.++
T Consensus       109 ~~v~C~~C~~~~~-r~~l~~H~-~~~C~~r~~~C~~C~~~~~~~-~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          109 ALMDCPQCQRPFQ-KFHINIHI-LKDCPRRQVSCDNCAASMAFE-DKEIHDQNCPLALEH  165 (170)
T ss_dssp             SEEECTTTCCEEE-GGGHHHHH-HHTCTTCEEECTTTCCEEEGG-GHHHHHTTCCC----
T ss_pred             eeeECCCCChHHH-HHHHHHHh-hhhCCCCCeECCCCCCccCHH-HHHhHHHhCcChhhh
Confidence            4567888887774 55688887 445556678899998877665 468898888877654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.57  E-value=0.015  Score=23.59  Aligned_cols=25  Identities=28%  Similarity=0.545  Sum_probs=13.0

Q ss_pred             ccccccccccCChHHHHhHHHhhcC
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      |.|++|.+.+.....|..|....|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            5555555555555555555444443

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.31  E-value=0.026  Score=22.82  Aligned_cols=26  Identities=23%  Similarity=0.480  Sum_probs=22.6

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhc
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      ..|.|++|.+.|.....|..|....+
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            35999999999999999999977644

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=94.75  E-value=0.018  Score=27.83  Aligned_cols=48  Identities=23%  Similarity=0.477  Sum_probs=36.3

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHH
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEH   77 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h   77 (94)
                      -..|.|..||..+. +..+..|. ..-.+...|.|..|++.|.... +..|
T Consensus         8 MV~F~C~~Cgd~lK-K~kv~~H~-~~Cr~~~~~SCIDC~~~F~~~~-y~~H   55 (79)
T 1wjv_A            8 MVFFTCNACGESVK-KIQVEKHV-SNCRNCECLSCIDCGKDFWGDD-YKSH   55 (79)
T ss_dssp             CCEEEESSSCCEEE-TTHHHHHH-HHCTTCCEEEETTTTEEEEGGG-TTTC
T ss_pred             eeEEEcCCCCCeee-cccchhHH-hhCCCCCcEEecccCCeeCCCC-EeCE
Confidence            35689999998877 45689997 5666666799999999998643 4444

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=94.02  E-value=0.03  Score=27.59  Aligned_cols=28  Identities=21%  Similarity=0.462  Sum_probs=16.8

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCCCC
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPS   58 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~   58 (94)
                      .....|-+||+.|..   |.+|+ ..+.+..|
T Consensus        19 ~d~iiClecGK~fK~---LkRHL-~~~hgltp   46 (87)
T 2jsp_A           19 DDHIVCLECGGSFKS---LKRHL-TTHHSMTP   46 (87)
T ss_dssp             SSCEECTBTCCEESB---HHHHH-HHTTCSCH
T ss_pred             CCceEecccchhhHH---HHHHH-HHccCCCH
Confidence            344567777777764   56776 55444443

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.59  E-value=0.42  Score=18.86  Aligned_cols=25  Identities=36%  Similarity=0.785  Sum_probs=17.3

Q ss_pred             CccccccccccCChHHHHhHHHhhc
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAH   53 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h   53 (94)
                      .-.|..|.+.++...+|..|++..|
T Consensus         9 kqhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A            9 KQHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3457777778887778888875443

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=89.43  E-value=0.23  Score=22.16  Aligned_cols=20  Identities=30%  Similarity=0.778  Sum_probs=17.7

Q ss_pred             ccccccccccCChHHHHhHH
Q psy12166         30 HSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~   49 (94)
                      -.|.+|+..|.....++.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            58999999999998898887

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=89.09  E-value=0.42  Score=25.05  Aligned_cols=28  Identities=14%  Similarity=0.287  Sum_probs=23.9

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHH
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVK   50 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~   50 (94)
                      .+.+...|.|.+|...|.+...+..|..
T Consensus        87 ~~~~~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           87 SDGEDRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             SSCCCTTTEETTTTEECSSHHHHHHHHT
T ss_pred             ccCCCCCeEcCCCCCEeCCHHHHHHHHC
Confidence            3456678999999999999999999973

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=88.77  E-value=0.29  Score=24.94  Aligned_cols=12  Identities=42%  Similarity=1.088  Sum_probs=6.4

Q ss_pred             CCcccccccccc
Q psy12166         28 KPHSCDLCGKTY   39 (94)
Q Consensus        28 ~~~~c~~c~~~f   39 (94)
                      .|+.|..||+.|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            355555555555

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.16  E-value=0.78  Score=18.63  Aligned_cols=22  Identities=18%  Similarity=0.472  Sum_probs=15.8

Q ss_pred             CCccccccccccCChHHHHhHH
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      .++.|..|+-.|.....+..|.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHK   28 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhh
Confidence            4567777777777777777775

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=87.99  E-value=0.38  Score=20.79  Aligned_cols=29  Identities=34%  Similarity=0.632  Sum_probs=15.3

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCeecCcccc
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGR   66 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~   66 (94)
                      -|.|..||..|+...-         .-.....|++||.
T Consensus         3 iY~C~rCg~~fs~~el---------~~lP~IrCpyCGy   31 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQL---------KVLPGVRCPYCGY   31 (48)
T ss_dssp             --CCCCTTTTCCCCCS---------CCCSSSCCTTTCC
T ss_pred             EEEeeccCCCccHHHH---------hhCCCcccCccCc
Confidence            3677777777765321         1123456777764

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=87.44  E-value=0.57  Score=17.94  Aligned_cols=22  Identities=18%  Similarity=0.345  Sum_probs=15.6

Q ss_pred             CeecCccccccCCHHHHHHHHH
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKR   79 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~   79 (94)
                      .+.|++|.........++.|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            3678888877777777776643

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=86.80  E-value=0.14  Score=24.82  Aligned_cols=40  Identities=23%  Similarity=0.530  Sum_probs=25.0

Q ss_pred             CccccccccccCChHHHHhHHHhhcCC----------------CCCeecCccccccCC
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQG----------------HPSVTCNVCGRTFSS   70 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~----------------~~~~~c~~C~~~f~~   70 (94)
                      ...|++||....... |...| ..-..                +-.|.|+.||.-|..
T Consensus         8 ~~~~PlCG~~L~W~e-LIeQM-L~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG   63 (95)
T 2k5c_A            8 MAKCPICGSPLKWEE-LIEEM-LIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYG   63 (95)
T ss_dssp             CEECSSSCCEECHHH-HHHHS-TTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEET
T ss_pred             cccCCcCCCccCHHH-HHHHH-HhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhc
Confidence            367999998876544 55454 22111                125899999977654

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=82.82  E-value=0.51  Score=26.84  Aligned_cols=26  Identities=31%  Similarity=0.585  Sum_probs=18.9

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCCCCeecCcccc
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGR   66 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~   66 (94)
                      ...|.|..||+.+.-              ..|+.|++|+.
T Consensus       169 ~~~~~C~~CG~i~~g--------------~~p~~CP~C~~  194 (202)
T 1yuz_A          169 DKFHLCPICGYIHKG--------------EDFEKCPICFR  194 (202)
T ss_dssp             CCEEECSSSCCEEES--------------SCCSBCTTTCC
T ss_pred             CcEEEECCCCCEEcC--------------cCCCCCCCCCC
Confidence            357999999877541              34689999874

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=81.93  E-value=1.5  Score=25.14  Aligned_cols=26  Identities=27%  Similarity=0.631  Sum_probs=21.0

Q ss_pred             CCCeecCccccccCC-HHHHHHHHHHh
Q psy12166         56 HPSVTCNVCGRTFSS-IANLAEHKRSR   81 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~-~~~l~~h~~~~   81 (94)
                      ..++.|..|+..|.. -..|+.|+..+
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e  193 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEE  193 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHH
Confidence            347889999999976 88888887765

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=80.96  E-value=0.69  Score=19.17  Aligned_cols=24  Identities=21%  Similarity=0.477  Sum_probs=14.8

Q ss_pred             CCccccccccccCChHHHHhHHHhhc
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAH   53 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h   53 (94)
                      ..+.|+.|+..+.. ..+..|. ..|
T Consensus         8 ~~~~C~~C~~~i~~-~~~~EH~-D~H   31 (39)
T 2i5o_A            8 DQVPCEKCGSLVPV-WDMPEHM-DYH   31 (39)
T ss_dssp             CEEECTTTCCEEEG-GGHHHHH-HHH
T ss_pred             CCcccccccCcCCc-ccccchh-hHH
Confidence            45677777777665 3456665 444

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=80.11  E-value=1.9  Score=22.60  Aligned_cols=29  Identities=24%  Similarity=0.551  Sum_probs=24.3

Q ss_pred             CCCCccccccccccCChHHHHhHHHhhcC
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      ++.+..|-.|...|.....+..|++..|.
T Consensus        12 e~~~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           12 GRQHTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             CCCceeEecCCCcccCHHHHHHHHHHhcC
Confidence            34679999999999999999999966554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	94
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-04

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 6e-06
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKR 79
          K + C  CGK++T       H+   H G     C VCG+ F    +L  H +
Sbjct: 2  KLYPCQ-CGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 7e-04
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV 63
          KP+ C  CGK ++   HL GH+K  H       C V
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	94
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.8
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.58
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.57
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.53
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.51
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.5
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.44
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.43
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.42
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.41
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.4
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.39
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.38
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.37
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.37
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.36
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.35
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.35
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.33
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.3
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.29
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.26
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.23
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.22
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.18
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.17
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.15
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.14
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.08
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.08
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.07
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.99
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.93
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.9
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.85
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.79
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.71
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.7
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.67
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.67
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.66
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.65
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.64
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.62
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.51
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.48
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.46
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.41
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.3
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.17
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.14
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.13
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.07
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.0
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.92
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.9
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.89
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.88
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.85
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.85
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.85
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.81
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.8
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.75
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.74
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.7
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.66
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.64
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.64
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.62
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.6
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.55
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.52
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.52
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.49
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.46
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.39
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.35
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.29
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.27
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.25
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.21
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.1
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.02
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.91
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.89
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.62
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	96.39
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.39
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.36
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	96.0
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.9
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.89
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.83
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.81
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	95.08
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.06
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.8
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.3
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.85
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.74
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.7
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.29
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.1
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	91.08
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.78
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	89.78
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	89.73
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	89.66
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	89.58
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	88.18
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	86.46
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.83

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.5e-20  Score=84.56  Aligned_cols=53  Identities=32%  Similarity=0.614  Sum_probs=50.4

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccccCCHHHHHHHHHHh
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~   81 (94)
                      |+||.|+ ||+.|.....|..|+ .+|++++||.|.+|++.|.....|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~-~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHH-HHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHh-hccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5899995 999999999999998 7999999999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=6.3e-16  Score=64.93  Aligned_cols=35  Identities=20%  Similarity=0.363  Sum_probs=19.7

Q ss_pred             CCCeecCccccccCCHHHHHHHHH-HhcCCCCceEe
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKR-SRHGITGFVVS   90 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~-~~~~~k~~~C~   90 (94)
                      ++||.|.+||+.|...++|..|++ +|+|+|||+|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            455555555555555555555543 45555555553

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.5e-15  Score=63.72  Aligned_cols=38  Identities=37%  Similarity=0.746  Sum_probs=34.8

Q ss_pred             CCCCccccccccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      .++||.|..||+.|....+|.+|++..|++++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            46899999999999999999999856899999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=7.7e-15  Score=61.50  Aligned_cols=37  Identities=24%  Similarity=0.538  Sum_probs=24.6

Q ss_pred             CCcccCCCCCCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         19 EPLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        19 ~~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      .|+++|++++||.|+.||++|...++|..|+ +.|+++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~-r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHR-RTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhC-ccCCCC
Confidence            4566666667777777777777777777776 566654

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.1e-15  Score=63.28  Aligned_cols=37  Identities=24%  Similarity=0.575  Sum_probs=34.8

Q ss_pred             hHHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         47 GHVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        47 ~H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +|+ ..|++++||.|.+||++|...++|..|+++|+||
T Consensus         2 rH~-~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSE-WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCC-SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccC-cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            466 7899999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.2e-14  Score=58.82  Aligned_cols=32  Identities=34%  Similarity=0.691  Sum_probs=20.9

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      |++++||.|.+||++|...+.|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            56666666666666666666666666666654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=7.4e-14  Score=58.08  Aligned_cols=34  Identities=24%  Similarity=0.398  Sum_probs=23.6

Q ss_pred             CcccCCCCCCccccccccccCChHHHHhHHHhhcC
Q psy12166         20 PLFRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        20 ~~~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      |.++|++++||.|..|+++|....+|..|+ ..|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~-r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHH-GGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHH-hcCc
Confidence            456677777777777777777777777776 4554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4.8e-14  Score=56.98  Aligned_cols=33  Identities=30%  Similarity=0.554  Sum_probs=30.7

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      +|++++||.|..||++|.....|..|+ +.|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~-r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhc-cccCCC
Confidence            589999999999999999999999998 789875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1e-13  Score=57.25  Aligned_cols=32  Identities=28%  Similarity=0.553  Sum_probs=16.9

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      +|++++||.|.+|+++|...++|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            35555555555555555555555555555544

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1e-13  Score=57.19  Aligned_cols=32  Identities=22%  Similarity=0.451  Sum_probs=17.6

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcC
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      +|+|++||.|+.|++.|....+|..|++..|+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            45555555555555555555555555533343

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.6e-13  Score=56.68  Aligned_cols=34  Identities=24%  Similarity=0.334  Sum_probs=31.1

Q ss_pred             ccCCCCCCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         22 FRFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        22 ~~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      ++|+|++||.|.+||++|.....|..|+ ..|.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~-r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHF-KRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHH-HHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhC-cccCCC
Confidence            5799999999999999999999999999 678764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.39  E-value=1.4e-13  Score=54.07  Aligned_cols=29  Identities=34%  Similarity=0.610  Sum_probs=17.1

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      +||.|.+|++.|..+++|..|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35566666666666666666666666554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.38  E-value=1e-13  Score=57.64  Aligned_cols=35  Identities=26%  Similarity=0.453  Sum_probs=32.5

Q ss_pred             HHHhhcCCCCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         48 HVKSAHQGHPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        48 H~~~~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      |. +.|++++||.|.+|++.|..+++|..|+++|.+
T Consensus         2 h~-R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 ST-RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CS-STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CC-CccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            55 689999999999999999999999999999875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.7e-13  Score=56.47  Aligned_cols=32  Identities=22%  Similarity=0.594  Sum_probs=26.2

Q ss_pred             eecCc--cccccCCHHHHHHHHHHhcCCCCceEe
Q psy12166         59 VTCNV--CGRTFSSIANLAEHKRSRHGITGFVVS   90 (94)
Q Consensus        59 ~~c~~--C~~~f~~~~~l~~h~~~~~~~k~~~C~   90 (94)
                      |.|+.  |++.|..+.+|..|+++|+|++||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            66765  888888888888888888888888885

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.2e-13  Score=53.43  Aligned_cols=29  Identities=17%  Similarity=0.465  Sum_probs=17.9

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      +||.|.+|++.|..+++|..|+++|+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            35666666666666666666666666654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=2.8e-13  Score=52.68  Aligned_cols=28  Identities=32%  Similarity=0.700  Sum_probs=19.7

Q ss_pred             CCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      ++||.|.+|++.|..+++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4677777777777777777777777765

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.35  E-value=4.3e-13  Score=54.79  Aligned_cols=31  Identities=19%  Similarity=0.458  Sum_probs=18.2

Q ss_pred             CCCCCCccccccccccCChHHHHhHHHhhcCC
Q psy12166         24 FDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        24 h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      |+|++||.|.+|++.|....+|.+|+ +.|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~-r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHL-KVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHH-GGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHc-cccCC
Confidence            45556666666666666666666665 45554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.35  E-value=4.5e-13  Score=54.73  Aligned_cols=32  Identities=25%  Similarity=0.522  Sum_probs=30.2

Q ss_pred             cCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         53 HQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        53 h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      |++++||.|.+|++.|.++++|..|+++|..+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=6.4e-13  Score=54.76  Aligned_cols=33  Identities=21%  Similarity=0.506  Sum_probs=30.0

Q ss_pred             hcCCCCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         52 AHQGHPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        52 ~h~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +|++++||.|++|++.|..+++|..|++.++++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            699999999999999999999999998776654

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=9.4e-13  Score=59.05  Aligned_cols=35  Identities=17%  Similarity=0.465  Sum_probs=32.6

Q ss_pred             CCCeecCccccccCCHHHHHHHHHHhcCCCCceEee
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKRSRHGITGFVVSA   91 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~C~~   91 (94)
                      ++||.|. ||+.|.....|..|+++|.|++||.|+.
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~   35 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGV   35 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCC
Confidence            5899995 9999999999999999999999999963

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.29  E-value=1.4e-12  Score=51.18  Aligned_cols=29  Identities=21%  Similarity=0.618  Sum_probs=27.2

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      +||.|++|+++|...+.|.+|+ +.|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHccccc-CcccCCC
Confidence            6899999999999999999999 7999875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.1e-12  Score=50.60  Aligned_cols=29  Identities=31%  Similarity=0.608  Sum_probs=27.1

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      +||.|.+||++|.+.++|.+|+ +.|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~-r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHI-KTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHH-HGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhc-CccCCcC
Confidence            6899999999999999999999 7999875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=1.6e-12  Score=50.47  Aligned_cols=28  Identities=32%  Similarity=0.828  Sum_probs=25.8

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCC
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      |+||.|++|++.|...++|..|+ +.|++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~-r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHI-RTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHH-HHHHC
T ss_pred             CcCccCCCCcCEecccccccccC-CCccC
Confidence            58999999999999999999999 78864

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.22  E-value=4.8e-13  Score=58.27  Aligned_cols=33  Identities=18%  Similarity=0.331  Sum_probs=18.8

Q ss_pred             cCCCCCeecCc--cccccCCHHHHHHHHHHhcCCC
Q psy12166         53 HQGHPSVTCNV--CGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        53 h~~~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      |++++||.|.+  |++.|..+++|..|+++|+|+|
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            55555555554  5555555555555555555553

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=9.2e-12  Score=47.23  Aligned_cols=25  Identities=32%  Similarity=0.667  Sum_probs=15.2

Q ss_pred             CCeecCccccccCCHHHHHHHHHHh
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~   81 (94)
                      +||.|..||++|..++.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            3566666666666666666666655

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.17  E-value=2.1e-12  Score=56.19  Aligned_cols=41  Identities=20%  Similarity=0.341  Sum_probs=34.7

Q ss_pred             CCCCCCcccCCCCCCccccc--cccccCChHHHHhHHHhhcCCCC
Q psy12166         15 GIPAEPLFRFDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        15 ~~~~~~~~~h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      +.+.+|+ .|.+++||.|..  |++.|...++|..|+ +.|++++
T Consensus         5 ~~l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~-r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHI-QTHLEDR   47 (47)
T ss_dssp             SSGGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHH-HHHTTTC
T ss_pred             chhcchh-hccCCCCeECCcCCCCccccCchHHHhhc-ccccCCC
Confidence            3344555 489999999987  999999999999999 7999875

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.9e-11  Score=48.10  Aligned_cols=28  Identities=32%  Similarity=0.678  Sum_probs=16.8

Q ss_pred             CCeecCc--cccccCCHHHHHHHHHHhcCC
Q psy12166         57 PSVTCNV--CGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        57 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +||.|.+  |++.|..+++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3556655  666666666666666666654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=2.4e-11  Score=47.84  Aligned_cols=28  Identities=36%  Similarity=0.608  Sum_probs=20.8

Q ss_pred             CCeecCc--cccccCCHHHHHHHHHHhcCC
Q psy12166         57 PSVTCNV--CGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        57 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +||.|++  |+++|..+++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4677766  777777777777777777765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.3e-11  Score=49.88  Aligned_cols=33  Identities=33%  Similarity=0.726  Sum_probs=29.7

Q ss_pred             ccccc--cccccCChHHHHhHHHhhcCCCCCeecCc
Q psy12166         30 HSCDL--CGKTYTLAKHLWGHVKSAHQGHPSVTCNV   63 (94)
Q Consensus        30 ~~c~~--c~~~f~~~~~l~~H~~~~h~~~~~~~c~~   63 (94)
                      |.|+.  |++.|.....|.+|+ +.|++++||.|..
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~-r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhcccc-CeeCCCCCEeCCC
Confidence            67775  999999999999999 7899999999963

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=5.1e-11  Score=47.24  Aligned_cols=28  Identities=32%  Similarity=0.743  Sum_probs=15.3

Q ss_pred             CeecC--ccccccCCHHHHHHHHHHhcCCC
Q psy12166         58 SVTCN--VCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        58 ~~~c~--~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      ||.|+  .|++.|...++|..|+++|+|+|
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            45553  25555555555555555555553

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2e-11  Score=46.26  Aligned_cols=26  Identities=35%  Similarity=0.652  Sum_probs=23.8

Q ss_pred             CCccccccccccCChHHHHhHHHhhcC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      +||+|..||+.|...+.|.+|+ +.|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hq-riHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQ-RIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHHH
T ss_pred             CCccCCCCcCeeccCcccccCc-cCCC
Confidence            6999999999999999999998 6763

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=2.4e-10  Score=44.85  Aligned_cols=28  Identities=39%  Similarity=0.892  Sum_probs=25.8

Q ss_pred             CCccccc--cccccCChHHHHhHHHhhcCCC
Q psy12166         28 KPHSCDL--CGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        28 ~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      +||.|..  |+++|...++|..|+ +.|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHL-RSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHH-HHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhc-CcCcCC
Confidence            6899988  999999999999999 789975

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=5.3e-10  Score=44.22  Aligned_cols=29  Identities=34%  Similarity=0.761  Sum_probs=26.1

Q ss_pred             CCcccc--ccccccCChHHHHhHHHhhcCCCC
Q psy12166         28 KPHSCD--LCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        28 ~~~~c~--~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      +||.|+  .|+++|...++|.+|+ +.|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~-r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhc-CcccccC
Confidence            589996  5999999999999999 7899875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=4.3e-10  Score=43.73  Aligned_cols=27  Identities=41%  Similarity=0.736  Sum_probs=17.7

Q ss_pred             CCeecCc--cccccCCHHHHHHHHHHhcC
Q psy12166         57 PSVTCNV--CGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        57 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~   83 (94)
                      +||.|.+  |++.|..+++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4666655  66667777667666666654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2.5e-10  Score=44.84  Aligned_cols=28  Identities=43%  Similarity=0.909  Sum_probs=25.4

Q ss_pred             CCccccc--cccccCChHHHHhHHHhhcCCC
Q psy12166         28 KPHSCDL--CGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        28 ~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      +||.|+.  |+++|...++|..|+ +.|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHV-RIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHH-HHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccc-cccCCC
Confidence            6899987  999999999999999 789875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.85  E-value=1.3e-09  Score=43.34  Aligned_cols=26  Identities=38%  Similarity=0.756  Sum_probs=13.9

Q ss_pred             CCccccc--cccccCChHHHHhHHHhhcC
Q psy12166         28 KPHSCDL--CGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        28 ~~~~c~~--c~~~f~~~~~l~~H~~~~h~   54 (94)
                      +||.|..  |++.|...++|.+|+ +.|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~-r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHh-hhcc
Confidence            4555544  555555555555555 4444

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.79  E-value=3.1e-09  Score=42.17  Aligned_cols=29  Identities=24%  Similarity=0.551  Sum_probs=26.7

Q ss_pred             CCCeecCc--cccccCCHHHHHHHHHHhcCC
Q psy12166         56 HPSVTCNV--CGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        56 ~~~~~c~~--C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      ++||.|.+  |++.|...++|..|+++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57999988  999999999999999999864

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=7.2e-09  Score=37.52  Aligned_cols=25  Identities=36%  Similarity=0.918  Sum_probs=15.3

Q ss_pred             CccccccccccCChHHHHhHHHhhcC
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      |+.|+.|++.|+.++.|..|+ +.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hm-r~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHM-RCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHG-GGCC
T ss_pred             CCccchhhhHhcchhHHHHHh-hccC
Confidence            455666666666666666666 4554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.5e-09  Score=41.10  Aligned_cols=21  Identities=29%  Similarity=0.776  Sum_probs=11.3

Q ss_pred             Cccccc--cccccCChHHHHhHH
Q psy12166         29 PHSCDL--CGKTYTLAKHLWGHV   49 (94)
Q Consensus        29 ~~~c~~--c~~~f~~~~~l~~H~   49 (94)
                      ||.|+.  |+++|...++|.+|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~   24 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHI   24 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHH
Confidence            455544  555555555555555

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=1.4e-08  Score=38.47  Aligned_cols=28  Identities=32%  Similarity=0.656  Sum_probs=17.0

Q ss_pred             CCCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      ++||.|++|...|..++.+..|.+.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3566666666666666666666666554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=7.1e-09  Score=37.52  Aligned_cols=26  Identities=38%  Similarity=0.792  Sum_probs=23.7

Q ss_pred             CeecCccccccCCHHHHHHHHHHhcC
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      |..|++|++.|+.++.|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45799999999999999999999876

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.66  E-value=3e-09  Score=41.27  Aligned_cols=27  Identities=26%  Similarity=0.760  Sum_probs=24.1

Q ss_pred             CCccccc--cccccCChHHHHhHHHhhcCC
Q psy12166         28 KPHSCDL--CGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        28 ~~~~c~~--c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      +||.|..  |+++|...++|.+|+ +.|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~-r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHI-RIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHT-HHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhc-CccCC
Confidence            6899987  999999999999998 67864

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=9.7e-09  Score=39.73  Aligned_cols=30  Identities=30%  Similarity=0.624  Sum_probs=16.6

Q ss_pred             CccccccccccCChHHHHhHHHhhcCCCCCe
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQGHPSV   59 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~   59 (94)
                      ...|.+||+.|.....|.+|. .+|++++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhk-lshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHK-LSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHG-GGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhh-cccCCCCCC
Confidence            345555555555555555554 455555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=1.9e-08  Score=37.50  Aligned_cols=25  Identities=24%  Similarity=0.697  Sum_probs=13.0

Q ss_pred             CCeecCccccccCCHHHHHHHHHHh
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~   81 (94)
                      +||.|.+||+.|..++....|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=5.2e-09  Score=40.19  Aligned_cols=26  Identities=23%  Similarity=0.533  Sum_probs=24.0

Q ss_pred             CCeecCc--cccccCCHHHHHHHHHHhc
Q psy12166         57 PSVTCNV--CGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        57 ~~~~c~~--C~~~f~~~~~l~~h~~~~~   82 (94)
                      +||.|.+  |++.|...++|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899988  9999999999999999985

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=5.6e-08  Score=37.55  Aligned_cols=32  Identities=31%  Similarity=0.718  Sum_probs=29.4

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhcCCCCce
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRHGITGFV   88 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~~~   88 (94)
                      +...|..||+.|.....|..|.-.|.|+|||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45789999999999999999999999999983

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=7.3e-08  Score=35.89  Aligned_cols=27  Identities=30%  Similarity=0.742  Sum_probs=24.3

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcC
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      ++||.|.+||+.|..++...+|. .+|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~-kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHT-KIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-GGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhh-hhcc
Confidence            58999999999999999999998 6764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=5.2e-08  Score=36.82  Aligned_cols=29  Identities=34%  Similarity=0.712  Sum_probs=25.9

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      ++||.|++|+.+|..++.+.-|. ++|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhv-rshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHV-RSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHH-HHHSCC
T ss_pred             CCCcccchHHHHhhccccceEee-ecccCc
Confidence            58999999999999999999999 677664

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=7.9e-08  Score=35.55  Aligned_cols=27  Identities=26%  Similarity=0.614  Sum_probs=14.3

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      +||+|..|.+.....+.|..|+ +.|++
T Consensus         2 rpfkcqlcsy~srnssqltvhl-r~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHL-RSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH-TTCCS
T ss_pred             CcceeeecccccCCchheEEee-ecccC
Confidence            4555555555555555555555 44543

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=1.4e-07  Score=34.85  Aligned_cols=29  Identities=24%  Similarity=0.445  Sum_probs=26.8

Q ss_pred             CCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      ++||.|..|+.....++.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            47999999999999999999999999985

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=5.1e-07  Score=33.47  Aligned_cols=27  Identities=22%  Similarity=0.454  Sum_probs=20.1

Q ss_pred             eecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      |.|+.||....-++.|+.|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            567777777777777777777777753

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=5.1e-07  Score=33.15  Aligned_cols=25  Identities=36%  Similarity=0.720  Sum_probs=15.3

Q ss_pred             ccccccccccCChHHHHhHHHhhcCC
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      +.|..||+.|.-.+.|.+|+ .+|++
T Consensus         3 hvc~ecgkaf~essklkrh~-lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQ-LVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHG-GGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHh-hcccC
Confidence            45666666666666666665 55654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=6e-07  Score=32.96  Aligned_cols=26  Identities=27%  Similarity=0.609  Sum_probs=23.8

Q ss_pred             eecCccccccCCHHHHHHHHHHhcCC
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      ..|..||+.|..++.|..|.-+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46899999999999999999999985

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=2e-06  Score=32.04  Aligned_cols=28  Identities=25%  Similarity=0.428  Sum_probs=15.3

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      +||+|..|.+.....++|..|++..|..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            3555655655555555555555444443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=1.6e-06  Score=32.60  Aligned_cols=21  Identities=48%  Similarity=0.809  Sum_probs=10.1

Q ss_pred             Cccccc--cccccCChHHHHhHH
Q psy12166         29 PHSCDL--CGKTYTLAKHLWGHV   49 (94)
Q Consensus        29 ~~~c~~--c~~~f~~~~~l~~H~   49 (94)
                      ||.|.+  |+++++..++|++|+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~   24 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHV   24 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHH
T ss_pred             CeecccCCCCcccCCHHHHHHHH
Confidence            444443  444555555555554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=2.9e-06  Score=30.64  Aligned_cols=26  Identities=31%  Similarity=0.544  Sum_probs=14.7

Q ss_pred             ecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         60 TCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        60 ~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      +|+.|.+.|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            35555555555555555555555553

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.8e-06  Score=31.93  Aligned_cols=27  Identities=22%  Similarity=0.690  Sum_probs=24.3

Q ss_pred             CCeecCc--cccccCCHHHHHHHHHHhcC
Q psy12166         57 PSVTCNV--CGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        57 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~   83 (94)
                      +||.|.+  |++.+..+++|..|+++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5899987  99999999999999998765

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=7.4e-06  Score=30.43  Aligned_cols=27  Identities=22%  Similarity=0.504  Sum_probs=24.1

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      +||+|..|......+++|..|+.+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            589999999999999999999998554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=4.6e-06  Score=33.81  Aligned_cols=24  Identities=29%  Similarity=0.720  Sum_probs=17.7

Q ss_pred             CCCCccccccccccCChHHHHhHH
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      |-+||.|.+|++.|...+++.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            446777777777777777777775

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.89  E-value=8.3e-06  Score=28.97  Aligned_cols=24  Identities=25%  Similarity=0.573  Sum_probs=16.1

Q ss_pred             ccccccccccCChHHHHhHHHhhcC
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      |.|..|..+|.-++.|.+|+ ++|.
T Consensus         1 ykcglcersfveksalsrhq-rvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQ-RVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG-GGTC
T ss_pred             CcccchHHHHHHHHHHHHHH-Hhhc
Confidence            46677777777777777776 5553

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.88  E-value=8.8e-06  Score=32.66  Aligned_cols=28  Identities=25%  Similarity=0.683  Sum_probs=18.6

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      +.|.|.+|++.|.+...|-.|+ ..|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~-~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHM-NVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHH-HTTCCS
T ss_pred             CccCCCCCCCccCCcccccchH-hhhcch
Confidence            4567777777777777777776 566544

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.85  E-value=5.9e-06  Score=31.31  Aligned_cols=26  Identities=31%  Similarity=0.696  Sum_probs=15.1

Q ss_pred             CccccccccccCChHHHHhHHHhhcC
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      ||.|.+|+..|...+-|.+|....|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            45666666666666666666533443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.85  E-value=1e-05  Score=32.43  Aligned_cols=30  Identities=30%  Similarity=0.452  Sum_probs=26.6

Q ss_pred             CCCeecCccccccCCHHHHHHHHHHhcCCC
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKRSRHGIT   85 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k   85 (94)
                      .+.|.|.+|++.|.+...|-.|+..|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            356999999999999999999999997654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=9.7e-06  Score=29.57  Aligned_cols=26  Identities=27%  Similarity=0.478  Sum_probs=19.6

Q ss_pred             CCccccccccccCChHHHHhHHHhhcC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      +||.|..|.+.....++|..|+ +.|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~-rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHL-RIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHH-HHSC
T ss_pred             CCcccccccchhcchhhHhhhh-hccc
Confidence            5788888888777777888887 5664

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=1.7e-05  Score=32.15  Aligned_cols=26  Identities=23%  Similarity=0.540  Sum_probs=23.2

Q ss_pred             CCCCCeecCccccccCCHHHHHHHHH
Q psy12166         54 QGHPSVTCNVCGRTFSSIANLAEHKR   79 (94)
Q Consensus        54 ~~~~~~~c~~C~~~f~~~~~l~~h~~   79 (94)
                      ++-+||.|.+|++.|...+.+..|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46789999999999999999998864

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.80  E-value=1.2e-05  Score=29.72  Aligned_cols=27  Identities=26%  Similarity=0.599  Sum_probs=15.4

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      ..|.|..|...|...-.|..|| .+|++
T Consensus         3 qvftcs~cqe~f~rrmelr~hm-vshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHM-VSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-HHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeee-ecccC
Confidence            3455666666666655566665 55554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.75  E-value=1.6e-05  Score=28.65  Aligned_cols=26  Identities=27%  Similarity=0.423  Sum_probs=23.3

Q ss_pred             cccccccccCChHHHHhHHHhhcCCCC
Q psy12166         31 SCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        31 ~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      +|+.|.+.|.++..|..|- +.|++++
T Consensus         2 qcp~c~k~f~skyylkvhn-r~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHN-RKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHH-HHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhcc-ccccCCC
Confidence            6899999999999999997 7898874

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.74  E-value=5.5e-06  Score=30.70  Aligned_cols=27  Identities=41%  Similarity=0.736  Sum_probs=16.3

Q ss_pred             CCccccc--cccccCChHHHHhHHHhhcCC
Q psy12166         28 KPHSCDL--CGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        28 ~~~~c~~--c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      +||+|..  |.+.|.....|.+|. ..|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs-~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHS-LTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHH-HHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhh-ccccC
Confidence            3566653  666666666666665 45554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=3.4e-05  Score=28.45  Aligned_cols=27  Identities=22%  Similarity=0.374  Sum_probs=24.2

Q ss_pred             ccccccccccCChHHHHhHHHhhcCCCC
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      |.|+.||..-...+-|.+|+ +.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHI-RsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHI-RTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH-HHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHH-HHhcCCC
Confidence            78999999999999999999 7898763

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.66  E-value=5.2e-05  Score=27.90  Aligned_cols=29  Identities=34%  Similarity=0.518  Sum_probs=26.5

Q ss_pred             CCCeecCccccccCCHHHHHHHHHHhcCC
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +..|.|..|...|...-.|..|+-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45799999999999999999999999985

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=3.6e-05  Score=28.47  Aligned_cols=27  Identities=30%  Similarity=0.570  Sum_probs=18.0

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhcC
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRHG   83 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~~   83 (94)
                      +||.|..|.....++++|..|++.-+|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            367777777777777777777665443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=2.3e-05  Score=27.78  Aligned_cols=24  Identities=29%  Similarity=0.728  Sum_probs=21.7

Q ss_pred             eecCccccccCCHHHHHHHHHHhc
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      |.|..|.++|..++.|..|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578899999999999999999875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=4.3e-05  Score=28.11  Aligned_cols=23  Identities=26%  Similarity=0.590  Sum_probs=10.6

Q ss_pred             CeecCc--cccccCCHHHHHHHHHH
Q psy12166         58 SVTCNV--CGRTFSSIANLAEHKRS   80 (94)
Q Consensus        58 ~~~c~~--C~~~f~~~~~l~~h~~~   80 (94)
                      ||.|+.  |++.|..++.|..|..+
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhc
Confidence            344443  44444444444444443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=4.5e-05  Score=27.74  Aligned_cols=26  Identities=19%  Similarity=0.425  Sum_probs=24.2

Q ss_pred             CCeecCccccccCCHHHHHHHHHHhc
Q psy12166         57 PSVTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        57 ~~~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      +|+.|..|...-..++.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78999999999999999999999885

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=9.6e-06  Score=30.70  Aligned_cols=21  Identities=29%  Similarity=0.727  Sum_probs=10.2

Q ss_pred             CeecCc--cccccCCHHHHHHHH
Q psy12166         58 SVTCNV--CGRTFSSIANLAEHK   78 (94)
Q Consensus        58 ~~~c~~--C~~~f~~~~~l~~h~   78 (94)
                      ||.|.+  |.+.|+..+....|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444444  555555554444443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.55  E-value=3e-05  Score=28.51  Aligned_cols=25  Identities=32%  Similarity=0.646  Sum_probs=21.5

Q ss_pred             CCccccc--cccccCChHHHHhHHHhhc
Q psy12166         28 KPHSCDL--CGKTYTLAKHLWGHVKSAH   53 (94)
Q Consensus        28 ~~~~c~~--c~~~f~~~~~l~~H~~~~h   53 (94)
                      .||.|+.  |+++|...+.|.+|. .+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhe-kvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHE-KVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHH-HHH
T ss_pred             CCccCCccCccccccCHHHHhhhh-hcc
Confidence            5888975  999999999999998 555

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.52  E-value=4.8e-05  Score=28.09  Aligned_cols=28  Identities=25%  Similarity=0.610  Sum_probs=24.6

Q ss_pred             CCeecCc--cccccCCHHHHHHHHHHhcCC
Q psy12166         57 PSVTCNV--CGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        57 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +||.|..  |.+.|.....|..|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4788865  999999999999999999885

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.52  E-value=4.6e-05  Score=27.62  Aligned_cols=22  Identities=36%  Similarity=0.739  Sum_probs=18.7

Q ss_pred             CccccccccccCChHHHHhHHH
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVK   50 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~   50 (94)
                      ||+|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6889999999999999888873

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.49  E-value=4.8e-05  Score=28.72  Aligned_cols=25  Identities=28%  Similarity=0.631  Sum_probs=22.0

Q ss_pred             CeecCccccccCCHHHHHHHHHHhc
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      ||.|.+|++.|...+-|-.|+..-+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            7899999999999999999977543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=7.3e-05  Score=27.54  Aligned_cols=23  Identities=30%  Similarity=0.670  Sum_probs=12.7

Q ss_pred             CeecCccccccCCHHHHHHHHHH
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      ||.|..|..+|..+.+|..|+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            35555555555555555555543

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=3.1e-05  Score=29.25  Aligned_cols=28  Identities=29%  Similarity=0.561  Sum_probs=23.4

Q ss_pred             CCccccc--cccccCChHHHHhHHHhhcCC
Q psy12166         28 KPHSCDL--CGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        28 ~~~~c~~--c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      +||.|..  |.+.|+..+.-.+|+.+.|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5899987  999999999999997566654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=9.3e-05  Score=27.32  Aligned_cols=27  Identities=26%  Similarity=0.544  Sum_probs=23.2

Q ss_pred             CCccccccccccCChHHHHhHHHhhcC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      +||+|..|.--..+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999999888999999999965554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=8.8e-05  Score=26.23  Aligned_cols=21  Identities=29%  Similarity=0.702  Sum_probs=13.9

Q ss_pred             CccccccccccCChHHHHhHH
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      ||.|..|...|.++..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666665

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00023  Score=28.26  Aligned_cols=23  Identities=39%  Similarity=0.690  Sum_probs=13.0

Q ss_pred             CCCcccc--ccccccCChHHHHhHH
Q psy12166         27 TKPHSCD--LCGKTYTLAKHLWGHV   49 (94)
Q Consensus        27 ~~~~~c~--~c~~~f~~~~~l~~H~   49 (94)
                      ++||.|.  .|+.+|...+.|..|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk   28 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHK   28 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhh
Confidence            4566663  3666666666655554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00016  Score=26.58  Aligned_cols=22  Identities=27%  Similarity=0.616  Sum_probs=20.6

Q ss_pred             CccccccccccCChHHHHhHHH
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHVK   50 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~~   50 (94)
                      ||.|..|...|..+.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            7899999999999999999994

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00014  Score=28.90  Aligned_cols=28  Identities=29%  Similarity=0.598  Sum_probs=24.5

Q ss_pred             CCCCeecC--ccccccCCHHHHHHHHHHhc
Q psy12166         55 GHPSVTCN--VCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        55 ~~~~~~c~--~C~~~f~~~~~l~~h~~~~~   82 (94)
                      .++||.|.  -|+..|...+.|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47899995  59999999999999988775

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.10  E-value=0.00023  Score=25.18  Aligned_cols=22  Identities=32%  Similarity=0.572  Sum_probs=15.4

Q ss_pred             ccccccccccCChHHHHhHHHh
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKS   51 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~   51 (94)
                      |+|+.|-+.|..++++..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6677777777777777777643

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.02  E-value=0.0005  Score=24.20  Aligned_cols=23  Identities=22%  Similarity=0.522  Sum_probs=21.0

Q ss_pred             CeecCccccccCCHHHHHHHHHH
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      ||.|..|...|.++..|+.|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            79999999999999999999764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00031  Score=29.32  Aligned_cols=27  Identities=37%  Similarity=0.583  Sum_probs=23.4

Q ss_pred             CCccccccccccCChHHHHhHHHhhcCC
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHVKSAHQG   55 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~~~~h~~   55 (94)
                      ..|+|..|++.|+....|+.|. ..|..
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HE-AQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHE-AQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHH-HHHTT
T ss_pred             ceeeccccccccCCHHHHhHhH-HhcCc
Confidence            4689999999999999999998 66754

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.89  E-value=0.00089  Score=24.97  Aligned_cols=28  Identities=21%  Similarity=0.482  Sum_probs=21.8

Q ss_pred             CCeecCc--cccccCCHHHHHHHHHHhcCC
Q psy12166         57 PSVTCNV--CGRTFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        57 ~~~~c~~--C~~~f~~~~~l~~h~~~~~~~   84 (94)
                      +.|.|.+  |+..|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4567765  888888888888888888875

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.0011  Score=23.89  Aligned_cols=22  Identities=18%  Similarity=0.386  Sum_probs=15.6

Q ss_pred             ccccccccccCChHHHHhHHHh
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKS   51 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~   51 (94)
                      |+|+.|+-....++.|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            6777777777777777777643

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.39  E-value=0.0036  Score=25.93  Aligned_cols=27  Identities=22%  Similarity=0.576  Sum_probs=15.4

Q ss_pred             CCCccccccccccCChHHHHhHHHhhc
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAH   53 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h   53 (94)
                      +.|..|++|+-...++.+|.+|+...|
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            455666666665556666666654444

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0023  Score=23.14  Aligned_cols=23  Identities=35%  Similarity=0.512  Sum_probs=13.4

Q ss_pred             eecCccccccCCHHHHHHHHHHh
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~   81 (94)
                      -.|+.|.++.+.+..|..|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            35555666666666666665554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.36  E-value=0.0031  Score=22.17  Aligned_cols=24  Identities=25%  Similarity=0.563  Sum_probs=21.1

Q ss_pred             eecCccccccCCHHHHHHHHHHhc
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      |.|++|-+.|..++++..|..+.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999987643

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.00  E-value=0.0097  Score=24.59  Aligned_cols=33  Identities=27%  Similarity=0.390  Sum_probs=27.7

Q ss_pred             CCCCCeecCccccccCCHHHHHHHHHHhcCCCC
Q psy12166         54 QGHPSVTCNVCGRTFSSIANLAEHKRSRHGITG   86 (94)
Q Consensus        54 ~~~~~~~c~~C~~~f~~~~~l~~h~~~~~~~k~   86 (94)
                      .++.|..|++|+....++.+|..|+...+=.||
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            456789999999999999999999987654454

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.0044  Score=25.73  Aligned_cols=25  Identities=24%  Similarity=0.719  Sum_probs=21.9

Q ss_pred             CeecCccccccCCHHHHHHHHHHhc
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      .|.|..|++.|.....|..|.-.|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5889999999999999999977654

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0096  Score=21.71  Aligned_cols=24  Identities=33%  Similarity=0.742  Sum_probs=12.5

Q ss_pred             eecCccccccCCHHHHHHHHHHhc
Q psy12166         59 VTCNVCGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        59 ~~c~~C~~~f~~~~~l~~h~~~~~   82 (94)
                      |.|..||+.......+..|....+
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             eechhHHHHHhhccCceEEEeecc
Confidence            445555555555555555544433

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0064  Score=23.24  Aligned_cols=23  Identities=30%  Similarity=0.769  Sum_probs=12.6

Q ss_pred             CeecCccccccCCHHHHHHHHHH
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      .|.|..||+.|.....+..|...
T Consensus         4 afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhhh
Confidence            35555566666555555555443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0039  Score=24.04  Aligned_cols=18  Identities=28%  Similarity=0.325  Sum_probs=9.4

Q ss_pred             ccCCHHHHHHHHHHhcCC
Q psy12166         67 TFSSIANLAEHKRSRHGI   84 (94)
Q Consensus        67 ~f~~~~~l~~h~~~~~~~   84 (94)
                      .|.....|..|+++|+||
T Consensus        16 pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          16 PFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCSSHHHHHHHTHHHHCC
T ss_pred             cchhHHHHHHHHhhcCCC
Confidence            355555555555555543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.08  E-value=0.01  Score=22.71  Aligned_cols=22  Identities=23%  Similarity=0.614  Sum_probs=12.7

Q ss_pred             CCccccccccccCChHHHHhHH
Q psy12166         28 KPHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        28 ~~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      ..|.|.+|.+.++..+++-+|.
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHH
T ss_pred             cEEEeehhhHHHHHHHHHHHHH
Confidence            4455666666666555555554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0055  Score=23.62  Aligned_cols=20  Identities=20%  Similarity=0.280  Sum_probs=15.8

Q ss_pred             ccccCChHHHHhHHHhhcCCC
Q psy12166         36 GKTYTLAKHLWGHVKSAHQGH   56 (94)
Q Consensus        36 ~~~f~~~~~l~~H~~~~h~~~   56 (94)
                      ++.|.....|..|+ ++|+++
T Consensus        14 ~~pf~a~YkLv~H~-R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHM-RRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHT-HHHHCC
T ss_pred             CCcchhHHHHHHHH-hhcCCC
Confidence            34677788999999 688875

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.80  E-value=0.012  Score=22.29  Aligned_cols=21  Identities=38%  Similarity=0.702  Sum_probs=15.3

Q ss_pred             CeecCccccccCCHHHHHHHH
Q psy12166         58 SVTCNVCGRTFSSIANLAEHK   78 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~   78 (94)
                      .|.|.-||-.|+..+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            467777777788777777664

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.30  E-value=0.029  Score=20.19  Aligned_cols=19  Identities=16%  Similarity=0.464  Sum_probs=14.3

Q ss_pred             cccccCCHHHHHHHHHHhc
Q psy12166         64 CGRTFSSIANLAEHKRSRH   82 (94)
Q Consensus        64 C~~~f~~~~~l~~h~~~~~   82 (94)
                      |.+.|...+.+..|+.+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            7778888888777777663

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.01  Score=26.76  Aligned_cols=21  Identities=24%  Similarity=0.493  Sum_probs=11.7

Q ss_pred             CccccccccccCChHHHHhHH
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      -|.|..|++.|.+...|..|+
T Consensus        15 qfYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHT
T ss_pred             EEecccccCccCCHHHHHHHH
Confidence            355555555555555555554

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.036  Score=20.02  Aligned_cols=17  Identities=29%  Similarity=0.483  Sum_probs=8.8

Q ss_pred             ccccccCChHHHHhHHH
Q psy12166         34 LCGKTYTLAKHLWGHVK   50 (94)
Q Consensus        34 ~c~~~f~~~~~l~~H~~   50 (94)
                      .||+.|+....|.-|.+
T Consensus         7 gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTCCEESSHHHHHHHHH
T ss_pred             CchhhhccHHHHHhHHH
Confidence            35555555555555543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.70  E-value=0.028  Score=24.84  Aligned_cols=41  Identities=15%  Similarity=0.285  Sum_probs=28.7

Q ss_pred             cCCCCCCccccccccccCChHHHHhHHHhhcCCCCCeecCccccc
Q psy12166         23 RFDRTKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGRT   67 (94)
Q Consensus        23 ~h~~~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~~   67 (94)
                      .-.....|.|+.|++.|+....+.    ..-...-.|.|..|+..
T Consensus         8 d~~~~~~y~Cp~C~~~ys~Lda~~----L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           8 DSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCB
T ss_pred             ccccCCceECCCCCCCcchhhHHH----hcCcCCCeEEecCCCCE
Confidence            334457899999999999766543    23344457999999753

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.29  E-value=0.059  Score=19.07  Aligned_cols=18  Identities=33%  Similarity=0.660  Sum_probs=8.4

Q ss_pred             cccccCCHHHHHHHHHHh
Q psy12166         64 CGRTFSSIANLAEHKRSR   81 (94)
Q Consensus        64 C~~~f~~~~~l~~h~~~~   81 (94)
                      |++.|..-..|..|+-+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            444444444444444443

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.10  E-value=0.063  Score=19.44  Aligned_cols=24  Identities=25%  Similarity=0.526  Sum_probs=16.2

Q ss_pred             cccc--ccccccCChHHHHhHHHhhc
Q psy12166         30 HSCD--LCGKTYTLAKHLWGHVKSAH   53 (94)
Q Consensus        30 ~~c~--~c~~~f~~~~~l~~H~~~~h   53 (94)
                      |.|.  .|+..|..+.++..|..+.|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            4554  47777888888877775544

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.08  E-value=0.17  Score=19.26  Aligned_cols=24  Identities=21%  Similarity=0.366  Sum_probs=17.8

Q ss_pred             CCCeecCccccccCCHHHHHHHHH
Q psy12166         56 HPSVTCNVCGRTFSSIANLAEHKR   79 (94)
Q Consensus        56 ~~~~~c~~C~~~f~~~~~l~~h~~   79 (94)
                      .+.|.|+.|.+-..+...+..|+.
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHH
Confidence            356778888887788877777764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.78  E-value=0.055  Score=24.24  Aligned_cols=23  Identities=39%  Similarity=0.587  Sum_probs=19.0

Q ss_pred             CeecCccccccCCHHHHHHHHHH
Q psy12166         58 SVTCNVCGRTFSSIANLAEHKRS   80 (94)
Q Consensus        58 ~~~c~~C~~~f~~~~~l~~h~~~   80 (94)
                      .|.|..|.+.|.+...|..|.++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            04689999999999999998654

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.78  E-value=0.34  Score=20.29  Aligned_cols=34  Identities=21%  Similarity=0.473  Sum_probs=26.1

Q ss_pred             CCCCCCccccc--cccccCChHHHHhHHHhhcCCCC
Q psy12166         24 FDRTKPHSCDL--CGKTYTLAKHLWGHVKSAHQGHP   57 (94)
Q Consensus        24 h~~~~~~~c~~--c~~~f~~~~~l~~H~~~~h~~~~   57 (94)
                      ...-+||.|-.  |.-.|+-..+|..|.+.+|...-
T Consensus        15 ~spyrpyrcvhqgc~aaftiq~nlilhy~avh~s~l   50 (61)
T d1x3ca1          15 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDL   50 (61)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCC
T ss_pred             cCCCCceeeeccchhhhhhhhhhHHHHHHHHhhhcC
Confidence            34557888854  88899999999999877887653

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=89.73  E-value=0.051  Score=21.27  Aligned_cols=26  Identities=35%  Similarity=0.743  Sum_probs=16.9

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCCCCeecCcccc
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGR   66 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~   66 (94)
                      ++-|.|..||+..              .++.|-.|++|+.
T Consensus         3 ~~~~vC~vCGyi~--------------~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYIH--------------KGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCEE--------------ESSCCSBCTTTCC
T ss_pred             CCEEECCCCCCEe--------------eCCCCCcCCCCCC
Confidence            4568888888542              2344667888874

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.66  E-value=0.4  Score=21.02  Aligned_cols=28  Identities=18%  Similarity=0.431  Sum_probs=22.8

Q ss_pred             CCCCccccccccccCChHHHHhHHHhhcC
Q psy12166         26 RTKPHSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        26 ~~~~~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      ....|+|..|+-.|.....|..|+ ..|.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl-~~hn   42 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHL-NIHN   42 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHH-HHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHH-Hhcc
Confidence            346799999999999999999997 5554

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.58  E-value=0.048  Score=21.49  Aligned_cols=26  Identities=35%  Similarity=0.703  Sum_probs=16.9

Q ss_pred             CCCccccccccccCChHHHHhHHHhhcCCCCCeecCcccc
Q psy12166         27 TKPHSCDLCGKTYTLAKHLWGHVKSAHQGHPSVTCNVCGR   66 (94)
Q Consensus        27 ~~~~~c~~c~~~f~~~~~l~~H~~~~h~~~~~~~c~~C~~   66 (94)
                      ++.|.|..||+.+              .++.|-.|++|+.
T Consensus         3 ~~~~~C~vCG~i~--------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYTA--------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCEE--------------ESCCCSBCTTTCC
T ss_pred             CcEEECCCCCCEe--------------cCCCCCcCCCCCC
Confidence            3567888888542              2345667888874

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.46  E-value=0.22  Score=20.49  Aligned_cols=21  Identities=29%  Similarity=0.732  Sum_probs=17.7

Q ss_pred             CccccccccccCChHHHHhHH
Q psy12166         29 PHSCDLCGKTYTLAKHLWGHV   49 (94)
Q Consensus        29 ~~~c~~c~~~f~~~~~l~~H~   49 (94)
                      +-.|.+|+..++...+++.|+
T Consensus         6 ~~eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           6 KPECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             CSCCTTTTCCCCSSSCHHHHH
T ss_pred             cccCcccceeeeeecchHhhh
Confidence            468999999998888888886

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.83  E-value=0.73  Score=17.53  Aligned_cols=25  Identities=24%  Similarity=0.587  Sum_probs=15.7

Q ss_pred             ccccccccccCChHHHHhHHHhhcC
Q psy12166         30 HSCDLCGKTYTLAKHLWGHVKSAHQ   54 (94)
Q Consensus        30 ~~c~~c~~~f~~~~~l~~H~~~~h~   54 (94)
                      ..|-.|-..|...-++.+|+-.+|.
T Consensus         4 ltclecmrtfkssfsiwrhqvevhn   28 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEVHN   28 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             ccHHHHHHHHHHHHHHHHhhheecc
Confidence            4566677777777777777633444