Psyllid ID: psy12195

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
Protein Sequence
MSKYQQHLEEHKVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART
Secondary Structure (PSIPRED)
cccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHccccccccccccccEccccHHHEEEEEccccccccccccccccEccccHHHHHHHHHHHcccccccccccccccEccccHHHHEEEEEcccccccccccccccEccccHHHHHEHHcccccccccEcccccccEccccHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccccccccccHHHHHHHHHcccccccccccHccccEccccHHHHHHHHHcccccccEcccc
Coil and Loop (DISEMBL)
MSKYQQHLEEHKVVIIRCETCTRNYESLESLTThlsfkhsnqflmkctncnvlvprdeilphlsiqhcqgttpsiyecnqckektndMTTMLNHYSVKHymdinmscvpcdvlfhNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTlmftcrrcpstflnsatLSKHVkmehnsksyqcnecpeSFERLNKLKRHkfqahndsvhqiqcpycitdfsedkNLIQHIVSVHlgkegtapart
Flexible Loop (DISEMBL)
mskyqqhleehKVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVsvhlgkegtapart
Low Complexity Region (SEG)
MSKYQQHLEEHKVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART
Disordered region (IsUnstruct)
*********EHKVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSK**********************LNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHL**********
Disordered Region (DISOPRED)
*SKYQQHLEEHKVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA****
Disordered Region (DISEMBL)
********EEHKVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART
Disordered Region (DISPRO)
MSKYQQHLEEHKVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKYQQHLEEHKVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	254	2.2.26 [Sep-21-2011]
Q05481	1191	Zinc finger protein 91 OS	no	N/A	0.905	0.193	0.263	8e-15
P17012	799	Zinc finger X-chromosomal	yes	N/A	0.862	0.274	0.292	1e-14
P17010	805	Zinc finger X-chromosomal	no	N/A	0.866	0.273	0.291	2e-14
Q95LI3	801	Zinc finger Y-chromosomal	yes	N/A	0.866	0.274	0.291	3e-14
O62836	800	Zinc finger X-chromosomal	yes	N/A	0.866	0.275	0.291	3e-14
Q6B4Z5	801	Zinc finger Y-chromosomal	no	N/A	0.866	0.274	0.286	3e-14
Q52V16	801	Zinc finger Y-chromosomal	N/A	N/A	0.866	0.274	0.286	5e-14
Q8N988	423	Zinc finger protein 557 O	no	N/A	0.826	0.496	0.276	5e-14
P08048	801	Zinc finger Y-chromosomal	no	N/A	0.866	0.274	0.286	5e-14
Q8TF45	676	Zinc finger protein 418 O	no	N/A	0.858	0.322	0.246	1e-13

>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2

 Score = 80.9 bits (198), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 105/254 (41%), Gaps = 24/254 (9%)

Query: 4    YQQHLEEHKVVIIR-----CETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDE 58
            +   L EHK +  R     CE C + +     LTTH    H+ +   KC  C     +  
Sbjct: 893  WSSTLTEHKRIHTREKTYKCEECGKAFSQPSHLTTHKRM-HTGEKPYKCEECGKAFSQSS 951

Query: 59   ILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKA 118
             L    I H  G  P  Y+C +C +     +T+  H  + H  +    C  C   F   +
Sbjct: 952  TLTTHKIIH-TGEKP--YKCEECGKAFRKSSTLTEH-KIIHTGEKPYKCEECGKAFSQSS 1007

Query: 119  TLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTH-ISQTHTLMFTCRRCPSTFLNSATL 177
            TL +H  +         +C  C    +    L TH I  T    + C  C   F++S+TL
Sbjct: 1008 TLTRHTRMH--TGEKPYKCEECGKAFNRSSKLTTHKIIHTGEKPYKCEECGKAFISSSTL 1065

Query: 178  SKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY----CITDFSEDK 233
            + H ++    K Y+C EC ++F + + L RHK       +H  + PY    C   F E  
Sbjct: 1066 NGHKRIHTREKPYKCEECGKAFSQSSTLTRHK------RLHTGEKPYKCGECGKAFKESS 1119

Query: 234  NLIQHIVSVHLGKE 247
             L +H + +H G++
Sbjct: 1120 ALTKHKI-IHTGEK 1132

Homo sapiens (taxid: 9606)

>sp|P17012|ZFX_MOUSE Zinc finger X-chromosomal protein OS=Mus musculus GN=Zfx PE=1 SV=2

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 94/229 (41%), Gaps = 10/229 (4%)

Query: 18  CETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYE 77
           C+ C        +L TH+  KHS +   KC  C +     + +   ++ H +  T   ++
Sbjct: 572 CQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALVHQESKT---HQ 628

Query: 78  CNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQC 137
           C  C  K+++ + +  H    H  D    C  CD  FH  + L KH+   HK   +  QC
Sbjct: 629 CLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKGKKMH-QC 686

Query: 138 NMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNEC 195
             C   +     L  HI   HT  L F C+RC   F   + L KH+K     K YQC  C
Sbjct: 687 RHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQSELKKHMKTHSGRKVYQCEYC 746

Query: 196 PESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
             S    +  KRH    H  D  H  +C YC   F       QHI+  H
Sbjct: 747 EYSTTDASGFKRHVISIHTKDYPH--RCEYCKKGFRRPSEKNQHIMRHH 793

Probable transcriptional activator.

Mus musculus (taxid: 10090)

>sp|P17010|ZFX_HUMAN Zinc finger X-chromosomal protein OS=Homo sapiens GN=ZFX PE=2 SV=2

 Score = 79.7 bits (195), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 10/230 (4%)

Query: 17  RCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIY 76
           +C+ C        +L TH+  KHS +   KC  C +     + +   ++ H +  T   +
Sbjct: 577 QCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKT---H 633

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           +C  C  K+++ + +  H    H  D    C  CD  FH  + L KH+   HK   +  Q
Sbjct: 634 QCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKGKKMH-Q 691

Query: 137 CNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           C  C   +     L  HI   HT  L F C+RC   F   + L KH+K     K YQC  
Sbjct: 692 CRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQSELKKHMKTHSGRKVYQCEY 751

Query: 195 CPESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
           C  S    +  KRH    H  D  H  +C YC   F       QHI+  H
Sbjct: 752 CEYSTTDASGFKRHVISIHTKDYPH--RCEYCKKGFRRPSEKNQHIMRHH 799

Probable transcriptional activator.

Homo sapiens (taxid: 9606)

>sp|Q95LI3|ZFY_BOVIN Zinc finger Y-chromosomal protein OS=Bos taurus GN=ZFY PE=2 SV=1

 Score = 79.0 bits (193), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 10/230 (4%)

Query: 17  RCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIY 76
           +C+ C        +L TH+  KHS +   KC  C +     + +   ++ H +  T   +
Sbjct: 573 QCQYCEYRSADSSNLKTHVKTKHSKEMSFKCDICLLTFSDTKEVQQHALIHQESKT---H 629

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           +C  C  K+++ + +  H    H  D    C  CD  FH  + L KH+   HK   +  Q
Sbjct: 630 QCVHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKGKKMH-Q 687

Query: 137 CNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           C  C   +     L  HI   HT  L F C+RC   F     L KH+K     K YQC  
Sbjct: 688 CRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCKKGFRQQNELKKHMKTHSGRKVYQCEY 747

Query: 195 CPESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
           C  S    +  KRH    H  D  H  +C YC   F       QHI   H
Sbjct: 748 CEYSTTDASGFKRHVISIHTKDYPH--RCEYCKKGFRRPSEKNQHITRHH 795

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Bos taurus (taxid: 9913)

>sp|O62836|ZFX_BOVIN Zinc finger X-chromosomal protein OS=Bos taurus GN=ZFX PE=2 SV=2

 Score = 79.0 bits (193), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 94/230 (40%), Gaps = 10/230 (4%)

Query: 17  RCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIY 76
           +C+ C        +L TH+  KHS +   KC  C +     + +   ++ H +  T   +
Sbjct: 572 QCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKT---H 628

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           +C  C  K+++ + +  H    H  D    C  CD  FH  + L KH+   HK   +  Q
Sbjct: 629 QCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAA-HKGKKMH-Q 686

Query: 137 CNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           C  C   +     L  HI   HT  L F C+RC   F     L KH+K     K YQC  
Sbjct: 687 CRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEY 746

Query: 195 CPESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
           C  S    +  KRH    H  D  H  +C YC   F       QHI+  H
Sbjct: 747 CEYSTTDASGFKRHVISIHTKDYPH--RCEYCKKGFRRPSEKNQHIMRHH 794

Probable transcriptional activator.

Bos taurus (taxid: 9913)

>sp|Q6B4Z5|ZFY_PANTR Zinc finger Y-chromosomal protein OS=Pan troglodytes GN=ZFY PE=2 SV=1

 Score = 79.0 bits (193), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 96/230 (41%), Gaps = 10/230 (4%)

Query: 17  RCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIY 76
           +C+ C        +L TH+  KHS +  +KC  C +     + +   ++ H +  T   +
Sbjct: 573 QCQYCEYRSADSSNLKTHIKTKHSKEMPLKCDICLLTFSDTKEVQQHTLVHQESKT---H 629

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           +C  C  K+++ + +  H    H  D    C  C+  FH  + L KH+ + HK   +  Q
Sbjct: 630 QCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAV-HKGKKMH-Q 687

Query: 137 CNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           C  C   +     L  HI   HT  L F C+RC   F     L KH+K     K YQC  
Sbjct: 688 CRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEY 747

Query: 195 CPESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
           C  S    +  KRH    H  D  H  +C YC   F       QHI+  H
Sbjct: 748 CEYSTTDASGFKRHVISIHTKDYPH--RCEYCKKGFRRPSEKNQHIMRHH 795

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Pan troglodytes (taxid: 9598)

>sp|Q52V16|ZFY_GORGO Zinc finger Y-chromosomal protein OS=Gorilla gorilla gorilla GN=ZFY PE=3 SV=1

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 95/230 (41%), Gaps = 10/230 (4%)

Query: 17  RCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIY 76
           +C+ C        +L TH+  KHS +   KC  C +     + +   ++ H +  T   +
Sbjct: 573 QCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQQHTLVHQESKT---H 629

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           +C  C  K+++ + +  H    H  D    C  C+  FH  + L KH+ + HK   +  Q
Sbjct: 630 QCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAV-HKGKKMH-Q 687

Query: 137 CNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           C  C   +     L  HI   HT  L F C+RC   F     L KH+K     K YQC  
Sbjct: 688 CRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEY 747

Query: 195 CPESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
           C  S    +  KRH    H  D  H  +C YC   F       QHI+  H
Sbjct: 748 CEYSTTDASGFKRHVISIHTKDYPH--RCEYCKKGFRRPSEKNQHIMRHH 795

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Gorilla gorilla gorilla (taxid: 9595)

>sp|Q8N988|ZN557_HUMAN Zinc finger protein 557 OS=Homo sapiens GN=ZNF557 PE=2 SV=2

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 14/224 (6%)

Query: 18  CETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEIL-PHLSIQHCQGTTPSIY 76
           C  C + + S   LT H    H+ +   +C++C         L PHL I    G  P  Y
Sbjct: 203 CNDCGKTFSSRSYLTVHKRI-HNGEKPYECSDCGKTFSNSSYLRPHLRIH--TGEKP--Y 257

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           +CNQC  +    +    H  V H  + +  C  C   F  +++L  H  +         +
Sbjct: 258 KCNQCFREFRTQSIFTRHKRV-HTGEGHYVCNQCGKAFGTRSSLSSHYSIH--TGEYPYE 314

Query: 137 CNMCSLVLDSKESLVTHISQTHTLM--FTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           C+ C      + +L  HI +THT    +TC  C  +F NS +L+ H ++ +  KSY+C++
Sbjct: 315 CHDCGRTFRRRSNLTQHI-RTHTGEKPYTCNECGKSFTNSFSLTIHRRIHNGEKSYECSD 373

Query: 195 CPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQH 238
           C +SF  L+ +K+H  + H       +C YC   F+ +  L  H
Sbjct: 374 CGKSFNVLSSVKKH-MRTHTGK-KPYECNYCGKSFTSNSYLSVH 415

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P08048|ZFY_HUMAN Zinc finger Y-chromosomal protein OS=Homo sapiens GN=ZFY PE=1 SV=3

 Score = 78.2 bits (191), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 95/230 (41%), Gaps = 10/230 (4%)

Query: 17  RCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIY 76
           +C+ C        +L TH+  KHS +   KC  C +     + +   ++ H +  T   +
Sbjct: 573 QCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQQHTLVHQESKT---H 629

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           +C  C  K+++ + +  H    H  D    C  C+  FH  + L KH+ + HK   +  Q
Sbjct: 630 QCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAV-HKGKKMH-Q 687

Query: 137 CNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           C  C   +     L  HI   HT  L F C+RC   F     L KH+K     K YQC  
Sbjct: 688 CRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEY 747

Query: 195 CPESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
           C  S    +  KRH    H  D  H  +C YC   F       QHI+  H
Sbjct: 748 CEYSTTDASGFKRHVISIHTKDYPH--RCEYCKKGFRRPSEKNQHIMRHH 795

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Homo sapiens (taxid: 9606)

>sp|Q8TF45|ZN418_HUMAN Zinc finger protein 418 OS=Homo sapiens GN=ZNF418 PE=1 SV=2

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 13/231 (5%)

Query: 18  CETCTRNYESLESLTTHLSFKHSNQFLMKCTNCN-VLVPRDEILPHLSIQHCQGTTPSIY 76
           C  C +++   +S++ H    H+ +   +C  C      +  ++ H  +     T    Y
Sbjct: 232 CWECGKSFSKYDSVSNHQRV-HTGKRPYECGECGKSFSHKGSLVQHQRVH----TGKRPY 286

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           EC +C +  +   +++ H  V H  +    C  C   F    TL KH  +         +
Sbjct: 287 ECGECGKSFSHKGSLVQHQRV-HTGERPYECGECGKSFSQNGTLIKHQRVH--TGERPYE 343

Query: 137 CNMCSLVLDSKESLVTH-ISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNEC 195
           C  C      K +L+ H    T    + C  C   F    TL++H ++    + Y+C EC
Sbjct: 344 CEECGKCFTQKGNLIQHQRGHTSERPYECEECGKCFSQKGTLTEHHRVHTRERPYECGEC 403

Query: 196 PESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK 246
            +SF R   L+ H  Q  +      +C  C   FS   NLIQH  S H G+
Sbjct: 404 GKSFSRKGHLRNH--QRGHTGERPYECGECGKSFSRKGNLIQHQRS-HTGE 451

Transcriptional repressor.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
357621869	596	hypothetical protein KGM_10142 [Danaus p	0.799	0.340	0.288	2e-14
297276611	632	PREDICTED: zinc finger protein 726-like	0.901	0.362	0.282	7e-14
395514081	866	PREDICTED: zinc finger protein 470-like	0.846	0.248	0.275	8e-14
9623224	393	zinc finger protein Zfx [Neofelis nebulo	0.866	0.559	0.295	9e-14
395517204	385	PREDICTED: zinc finger protein 3 homolog	0.866	0.571	0.261	9e-14
62416	395	Azf-1 [Alligator mississippiensis]	0.862	0.554	0.301	1e-13
441627788	950	PREDICTED: zinc finger protein 91-like i	0.881	0.235	0.270	1e-13
9623290	387	zinc finger protein Zfy [Catopuma temmin	0.866	0.568	0.291	1e-13
334324898	899	PREDICTED: zinc finger protein 268-like	0.870	0.245	0.273	1e-13
441627791	1008	PREDICTED: zinc finger protein 91-like i	0.881	0.222	0.270	1e-13

>gi|357621869|gb|EHJ73544.1| hypothetical protein KGM_10142 [Danaus plexippus]

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 114/246 (46%), Gaps = 43/246 (17%)

Query: 5   QQHLEEH--KVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVL-VPRDEILP 61
           ++H+E+H  K    +CE CT+   +  SL  HL   HS ++  KC  C ++ + R  +L 
Sbjct: 263 RKHMEKHDSKNGPFQCELCTQYCPTKVSLRGHLK-SHSTRY--KCKLCGIVRLSRQHVLE 319

Query: 62  HLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLY 121
           H S++H    T ++Y+C QC+  TN  T M  H      + ++  C P            
Sbjct: 320 HYSLEHTH--TATVYKCPQCEHTTNKRTAMQRH------VRLHSKCEP------------ 359

Query: 122 KHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQ-THTLMFTCRRCPSTFLNSATLSKH 180
                        ++C++C     SKESL  HI +     +  C  C S+F+ +A L KH
Sbjct: 360 -------------VKCDLCGKTYKSKESLRIHIMRHDEQKLHQCEFCSSSFVYAAQLRKH 406

Query: 181 VKMEHNSKSYQCNECPESFERLNKLKRH--KFQAHND-SVHQIQCPYCITDFSEDKNLIQ 237
           ++  H +K Y C EC   F+ ++ LK+H  + + H D S ++  CP C   F     L  
Sbjct: 407 IRSVHENKDYYCVECDIMFKSMDNLKQHLQRAKRHRDSSSYKYTCPQCPERFISQSTLAT 466

Query: 238 HIVSVH 243
           H  + H
Sbjct: 467 HRTNAH 472

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|297276611|ref|XP_002801201.1| PREDICTED: zinc finger protein 726-like [Macaca mulatta]

 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 108/255 (42%), Gaps = 26/255 (10%)

Query: 4   YQQHLEEHKVV-----IIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDE 58
           +  HL  HK++       +CE C + +    +LTTH    H+ +   KC  C     R  
Sbjct: 227 WSSHLTTHKIIHTGEKWYKCEDCGKAFNRSSNLTTHKQI-HTGEKPYKCEECGKAFQRSS 285

Query: 59  ILP-HLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNK 117
           IL  H  I    G  P  YEC +C  KT    + L+ + + H  +    C  C   F+N 
Sbjct: 286 ILTTHKRIH--TGEKP--YECEECG-KTFKYLSSLSTHKIIHTGEKPYKCEECGKAFNNS 340

Query: 118 ATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTH-ISQTHTLMFTCRRCPSTFLNSAT 176
           +T+ KH  + +       +C+ C        SL  H I  T    + C  C   F  S+ 
Sbjct: 341 STVTKHKKIHNGEKPY--KCDECGEAFKYSCSLTAHKIIHTGKKPYECEECGKVFKRSSP 398

Query: 177 LSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY----CITDFSED 232
           LSKH ++    K Y+C EC ++F R + L  HK       +H  + PY    C   F+  
Sbjct: 399 LSKHKRIHTGEKPYKCEECGKAFSRSSILTTHKI------IHTGEKPYKCEDCGKAFNRS 452

Query: 233 KNLIQHIVSVHLGKE 247
            NL  H   +H G++
Sbjct: 453 SNLTTH-KQIHTGEK 466

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395514081|ref|XP_003761249.1| PREDICTED: zinc finger protein 470-like [Sarcophilus harrisii]

 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 95/236 (40%), Gaps = 21/236 (8%)

Query: 18  CETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEIL-PHLSIQHCQGTTPSIY 76
           C  C + +     LT H    H+ +   +C  C     +   L  H +I     T    Y
Sbjct: 439 CNNCGKAFSQKTGLTRHQKI-HTGEKPYQCNECGKAFNQKRTLTEHQNIH----TGEKPY 493

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           ECN+C +  N   T+  H ++ H  +    C  C   F+ K  L KH Y+         +
Sbjct: 494 ECNECGKAFNQKNTLTEHQNI-HTGEKPYECNECGKAFNQKKRLTKHQYVH--TGEKPYE 550

Query: 137 CNMCSLVLDSKESLVTHIS-QTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNEC 195
           C  C      K +L  H +  T    + C  C   F     LSKH K     K YQCN+C
Sbjct: 551 CKECGKAFSQKRTLTEHQNIHTGEKPYECNECGKAFGQKTGLSKHQKCHTGEKPYQCNQC 610

Query: 196 PESFERLNKLKRHKFQAHNDSVHQIQCPY----CITDFSEDKNLIQHIVSVHLGKE 247
            ++F R  +L RH+       +H  + PY    C   F E  +L QH   +H G++
Sbjct: 611 GKAFSRRTRLTRHQ------KIHTGEKPYECNECGKAFREKTSLTQH-QKIHTGEK 659

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|9623224|gb|AAF90066.1| zinc finger protein Zfx [Neofelis nebulosa]

 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 95/230 (41%), Gaps = 10/230 (4%)

Query: 17  RCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIY 76
           +C+ C        +L TH+  KHS +   KC  C +     + +   ++ H +  T   +
Sbjct: 165 QCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKT---H 221

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           +C QC  K+++ + +  H    H  D    C  CD  FH  + L KH+   HK   +  Q
Sbjct: 222 QCLQCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHV-AAHKGKKMH-Q 279

Query: 137 CNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           C  C   +     L  HI   HT  L F C+RC   F     L KH+K     K YQC  
Sbjct: 280 CRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEY 339

Query: 195 CPESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
           C  S    +  KRH    H  D  H  +C YC   F       QHI+  H
Sbjct: 340 CEYSTTDASGFKRHVISIHTKDYPH--RCEYCKKGFRRPSEKNQHIMRHH 387

Source: Neofelis nebulosa

Species: Neofelis nebulosa

Genus: Neofelis

Family: Felidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395517204|ref|XP_003762769.1| PREDICTED: zinc finger protein 3 homolog [Sarcophilus harrisii]

 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 13/233 (5%)

Query: 17  RCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCN-VLVPRDEILPHLSIQHCQGTTPSI 75
           +C+TC +++     L  HL   H+ +   +C  C      R EI+ H  I     T    
Sbjct: 137 KCDTCGQSFGQRSVLIQHLRI-HTGEKPFECNECGRAFSQRSEIIRHRRIH----TGDKP 191

Query: 76  YECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSI 135
           YECN+C +  +  +T++ H  + H  +    C  C   F  ++ L +H  +         
Sbjct: 192 YECNECGKAFSHRSTLIEHQRI-HTGEKPFECNECAKAFRGRSDLIRHQRIH--TGEKPY 248

Query: 136 QCNMCSLVLDSKESLVTHIS-QTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           QCN C      +   + H    T    + C  C  TF  S++L +H ++    + Y+CNE
Sbjct: 249 QCNECGKAFSHRSVFIAHQRIHTGEKPYECHECGKTFNWSSSLFQHQRVHSGERPYECNE 308

Query: 195 CPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE 247
           C ++F +L  L  H  + H       +C  C   FS   NL+QH   +H G++
Sbjct: 309 CGKAFTQLAVLIDH-LRTHTGE-KPYECNECGKAFSHGSNLLQH-QRIHSGEK 358

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|62416|emb|CAA43883.1| Azf-1 [Alligator mississippiensis]

 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 93/229 (40%), Gaps = 10/229 (4%)

Query: 18  CETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYE 77
           C+ C        +L TH+  KHS +   KC  C       + L   ++ H +  T   ++
Sbjct: 168 CQYCEYRSADSPNLKTHIKTKHSKEMPFKCDICLQTFSDTKELQQHALMHQESKT---HQ 224

Query: 78  CNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQC 137
           C  C  K+++ + +  H    H  D    C  CD  FH  + L KH+   HK   L +QC
Sbjct: 225 CLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHV-AAHKGKKL-LQC 282

Query: 138 NMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNEC 195
             C   +     L  HI   HT  L F C+RC   F     L KH+K     K YQC  C
Sbjct: 283 RHCDFKIADPFILRRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYC 342

Query: 196 PESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
             S    +  KRH    H  D  H  +C YC   F       QHI+  H
Sbjct: 343 EYSTTDASGFKRHVISIHTKDYPH--RCEYCKKRFQRASEKNQHIMRHH 389

Source: Alligator mississippiensis

Species: Alligator mississippiensis

Genus: Alligator

Family: Alligatoridae

Order: Crocodylia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|441627788|ref|XP_004089304.1| PREDICTED: zinc finger protein 91-like isoform 4 [Nomascus leucogenys] gi|441627816|ref|XP_004089306.1| PREDICTED: zinc finger protein 91-like isoform 6 [Nomascus leucogenys]

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 24/248 (9%)

Query: 8   LEEHKVVIIR-----CETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPH 62
           L EHK++  R     CE C + +     LTTH    H+ +   KC  C     +   L  
Sbjct: 598 LTEHKIIHTREKTYKCEECGKAFSQPSHLTTHKRM-HTGEKPYKCEECGKAFSQSSTLTT 656

Query: 63  LSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYK 122
             I H  G  P  Y+C +C +     +T+  H  + H  +    C  C   F   +TL +
Sbjct: 657 HKIIH-TGEKP--YKCEECGKAFRKSSTLTEH-KIIHTGEKPYKCEECGKAFSQSSTLTR 712

Query: 123 HLYLEHKATSLSIQCNMCSLVLDSKESLVTH-ISQTHTLMFTCRRCPSTFLNSATLSKHV 181
           H  +         +C  C    +    L TH I  T    + C  C   F++S+TL+ H 
Sbjct: 713 HTRMH--TGEKPYKCEECGKAFNRSSKLTTHKIIHTGEKPYKCEECGKAFISSSTLNGHK 770

Query: 182 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY----CITDFSEDKNLIQ 237
           ++    K Y+C EC ++F + + L RHK       +H  + PY    C   F E   L +
Sbjct: 771 RIHTREKPYKCEECGKAFSQSSTLTRHK------RLHTGEKPYTCGECGKAFKESSALTK 824

Query: 238 HIVSVHLG 245
           H + +H G
Sbjct: 825 HKI-IHTG 831

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|9623290|gb|AAF90099.1| zinc finger protein Zfy [Catopuma temminckii]

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 10/230 (4%)

Query: 17  RCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIY 76
           +C+ C        +L TH+  KHS +   KC  C +     + +   ++ H +  T   +
Sbjct: 164 QCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKT---H 220

Query: 77  ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ 136
           +C  C  K+++ + +  H    H  D  + C  CD  FH  + L KH+   HK   +  Q
Sbjct: 221 QCLHCDHKSSNSSDLKRHIISVHTKDYPLKCDMCDKGFHRPSELKKHV-AAHKGKKMH-Q 278

Query: 137 CNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE 194
           C  C   +     L  HI   HT  L F C+RC   F     L KH+K     K YQC  
Sbjct: 279 CRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEY 338

Query: 195 CPESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVH 243
           C  S    +  KRH    H  D  H  +C YC   F       QHI+  H
Sbjct: 339 CEYSTTDASGFKRHVISIHTKDYPH--RCEYCKKGFRRPSEKNQHIMRHH 386

Source: Catopuma temminckii

Species: Catopuma temminckii

Genus: Catopuma

Family: Felidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334324898|ref|XP_003340580.1| PREDICTED: zinc finger protein 268-like [Monodelphis domestica]

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 13/234 (5%)

Query: 16  IRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCN-VLVPRDEILPHLSIQHCQGTTPS 74
            +C  C + +   ESL TH S  H+ +   +C  C      R  ++ H SI     T   
Sbjct: 397 FKCNECGKAFSWKESLITHQS-THTGEKPFECNECGKTFSARKSLIKHQSIH----TGEK 451

Query: 75  IYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLS 134
            ++CN+C +  +    ++ H S+ H  +    C  C   F  K  L  H           
Sbjct: 452 PFQCNECGKAFSQKVNLITHQSI-HTGEKPFECNECGKTFSRKGHLVSHQRTH--TGEKP 508

Query: 135 IQCNMCSLVLDSKESLVTH-ISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCN 193
            +CN C      KESL+ H I  T    F C  C  TF     L  H +     KS++CN
Sbjct: 509 FECNECGKAFTWKESLIIHQIIHTGEKPFKCNECGKTFTQKRKLITHQRTHTGEKSFECN 568

Query: 194 ECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE 247
           EC + F     L  H  Q+ +      +C  C   FS  ++LI+H   +H G++
Sbjct: 569 ECGKDFSWKESLIAH--QSTHTGEKPFECNECGKAFSVRQSLIKH-QRIHTGEK 619

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|441627791|ref|XP_004089305.1| PREDICTED: zinc finger protein 91-like isoform 5 [Nomascus leucogenys]

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 103/248 (41%), Gaps = 24/248 (9%)

Query: 8   LEEHKVVIIR-----CETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPH 62
           L EHK++  R     CE C + +     LTTH    H+ +   KC  C     +   L  
Sbjct: 656 LTEHKIIHTREKTYKCEECGKAFSQPSHLTTHKRM-HTGEKPYKCEECGKAFSQSSTLTT 714

Query: 63  LSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYK 122
             I H  G  P  Y+C +C +     +T+  H  + H  +    C  C   F   +TL +
Sbjct: 715 HKIIH-TGEKP--YKCEECGKAFRKSSTLTEH-KIIHTGEKPYKCEECGKAFSQSSTLTR 770

Query: 123 HLYLEHKATSLSIQCNMCSLVLDSKESLVTH-ISQTHTLMFTCRRCPSTFLNSATLSKHV 181
           H  +         +C  C    +    L TH I  T    + C  C   F++S+TL+ H 
Sbjct: 771 HTRMH--TGEKPYKCEECGKAFNRSSKLTTHKIIHTGEKPYKCEECGKAFISSSTLNGHK 828

Query: 182 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY----CITDFSEDKNLIQ 237
           ++    K Y+C EC ++F + + L RHK       +H  + PY    C   F E   L +
Sbjct: 829 RIHTREKPYKCEECGKAFSQSSTLTRHK------RLHTGEKPYTCGECGKAFKESSALTK 882

Query: 238 HIVSVHLG 245
           H + +H G
Sbjct: 883 HKI-IHTG 889

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	254
UNIPROTKB|F1NBG4	394	ZFX "Uncharacterized protein"	0.913	0.588	0.305	3.3e-24
UNIPROTKB|E9PEP7	755	ZFX "Zinc finger X-chromosomal	0.909	0.305	0.312	2.3e-23
UNIPROTKB|P17010	805	ZFX "Zinc finger X-chromosomal	0.909	0.286	0.312	2.6e-23
UNIPROTKB|B9EG97	844	ZFX "ZFX protein" [Homo sapien	0.909	0.273	0.312	2.8e-23
UNIPROTKB|F1M952	748	Zfx "Protein Zfx" [Rattus norv	0.909	0.308	0.312	2.9e-23
MGI|MGI:99211	799	Zfx "zinc finger protein X-lin	0.909	0.289	0.308	3.2e-23
UNIPROTKB|F1LMV1	799	Zfx "Protein Zfx" [Rattus norv	0.909	0.289	0.312	3.2e-23
UNIPROTKB|F1NQX8	795	ZFX "Uncharacterized protein"	0.913	0.291	0.305	4.1e-23
UNIPROTKB|Q95LI3	801	ZFY "Zinc finger Y-chromosomal	0.909	0.288	0.312	4.2e-23
UNIPROTKB|F1MPG2	799	ZFX "Zinc finger X-chromosomal	0.909	0.289	0.312	5.3e-23

UNIPROTKB|F1NBG4 ZFX "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 76/249 (30%), Positives = 104/249 (41%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNC-NVLVPRD 57
             S+ ++H+  H      +C+ C   Y S +S  L TH+  KHS +   KC  C        
Sbjct:   150 SELKKHMRIHTGEKPYQCQYC--EYRSADSSNLKTHVKTKHSKETSSKCDICFQTFSDTK 207

Query:    58 EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNK 117
             E+  H ++ H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH  
Sbjct:   208 ELQQH-TLMHQESKT---HQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRP 263

Query:   118 ATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSA 175
             + L KH+   HK   L  QC  C   +     L  HI   HT  L F C+RC   F    
Sbjct:   264 SELKKHV-AAHKGKKLH-QCRHCDFKIADPFILSRHILSVHTKDLPFRCKRCRKGFRQQN 321

Query:   176 TLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDKN 234
              L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F     
Sbjct:   322 ELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPSE 379

Query:   235 LIQHIVSVH 243
               QHI+  H
Sbjct:   380 KNQHIMRHH 388

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E9PEP7 ZFX "Zinc finger X-chromosomal protein" [Homo sapiens (taxid:9606)]

 Score = 279 (103.3 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 78/250 (31%), Positives = 107/250 (42%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNCNVLVPRD- 57
             S+ ++H+  H      +C+ C   Y S +S  L TH+  KHS +   KC  C +L   D 
Sbjct:   511 SELKKHMRIHTGEKPYQCQYC--EYRSADSSNLKTHVKTKHSKEMPFKCDIC-LLTFSDT 567

Query:    58 -EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHN 116
              E+  H  I H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH 
Sbjct:   568 KEVQQHALI-HQESKT---HQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHR 623

Query:   117 KATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNS 174
              + L KH+   HK   +  QC  C   +     L  HI   HT  L F C+RC   F   
Sbjct:   624 PSELKKHV-AAHKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQ 681

Query:   175 ATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDK 233
             + L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F    
Sbjct:   682 SELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPS 739

Query:   234 NLIQHIVSVH 243
                QHI+  H
Sbjct:   740 EKNQHIMRHH 749

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|P17010 ZFX "Zinc finger X-chromosomal protein" [Homo sapiens (taxid:9606)]

 Score = 279 (103.3 bits), Expect = 2.6e-23, P = 2.6e-23
 Identities = 78/250 (31%), Positives = 107/250 (42%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNCNVLVPRD- 57
             S+ ++H+  H      +C+ C   Y S +S  L TH+  KHS +   KC  C +L   D 
Sbjct:   561 SELKKHMRIHTGEKPYQCQYC--EYRSADSSNLKTHVKTKHSKEMPFKCDIC-LLTFSDT 617

Query:    58 -EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHN 116
              E+  H  I H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH 
Sbjct:   618 KEVQQHALI-HQESKT---HQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHR 673

Query:   117 KATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNS 174
              + L KH+   HK   +  QC  C   +     L  HI   HT  L F C+RC   F   
Sbjct:   674 PSELKKHV-AAHKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQ 731

Query:   175 ATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDK 233
             + L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F    
Sbjct:   732 SELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPS 789

Query:   234 NLIQHIVSVH 243
                QHI+  H
Sbjct:   790 EKNQHIMRHH 799

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|B9EG97 ZFX "ZFX protein" [Homo sapiens (taxid:9606)]

 Score = 279 (103.3 bits), Expect = 2.8e-23, P = 2.8e-23
 Identities = 78/250 (31%), Positives = 107/250 (42%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNCNVLVPRD- 57
             S+ ++H+  H      +C+ C   Y S +S  L TH+  KHS +   KC  C +L   D 
Sbjct:   600 SELKKHMRIHTGEKPYQCQYC--EYRSADSSNLKTHVKTKHSKEMPFKCDIC-LLTFSDT 656

Query:    58 -EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHN 116
              E+  H  I H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH 
Sbjct:   657 KEVQQHALI-HQESKT---HQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHR 712

Query:   117 KATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNS 174
              + L KH+   HK   +  QC  C   +     L  HI   HT  L F C+RC   F   
Sbjct:   713 PSELKKHV-AAHKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQ 770

Query:   175 ATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDK 233
             + L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F    
Sbjct:   771 SELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPS 828

Query:   234 NLIQHIVSVH 243
                QHI+  H
Sbjct:   829 EKNQHIMRHH 838

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F1M952 Zfx "Protein Zfx" [Rattus norvegicus (taxid:10116)]

 Score = 278 (102.9 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 78/250 (31%), Positives = 106/250 (42%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNCNVLVPRD- 57
             S+ ++H+  H       C+ C   Y S +S  L TH+  KHS +   KC  C +L   D 
Sbjct:   504 SELKKHMRIHTGEKPYECQYC--EYRSADSSNLKTHVKTKHSKEMPFKCDIC-LLTFSDT 560

Query:    58 -EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHN 116
              E+  H  I H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH 
Sbjct:   561 KEVQQHALI-HQESKT---HQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHR 616

Query:   117 KATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNS 174
              + L KH+   HK   +  QC  C   +     L  HI   HT  L F C+RC   F   
Sbjct:   617 PSELKKHV-AAHKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQ 674

Query:   175 ATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDK 233
             + L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F    
Sbjct:   675 SELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPS 732

Query:   234 NLIQHIVSVH 243
                QHI+  H
Sbjct:   733 EKNQHIMRHH 742

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:99211 Zfx "zinc finger protein X-linked" [Mus musculus (taxid:10090)]

 Score = 278 (102.9 bits), Expect = 3.2e-23, P = 3.2e-23
 Identities = 77/250 (30%), Positives = 107/250 (42%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNCNVLVPRD- 57
             S+ ++H+  H       C+ C   Y S +S  L TH+  KHS +   KC  C +L   D 
Sbjct:   555 SELKKHMRIHTGEKPYECQYC--EYRSADSSNLKTHVKTKHSKEMPFKCDIC-LLTFSDT 611

Query:    58 -EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHN 116
              E+  H ++ H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH 
Sbjct:   612 KEVQQH-ALVHQESKT---HQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHR 667

Query:   117 KATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNS 174
              + L KH+   HK   +  QC  C   +     L  HI   HT  L F C+RC   F   
Sbjct:   668 PSELKKHV-AAHKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQ 725

Query:   175 ATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDK 233
             + L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F    
Sbjct:   726 SELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPS 783

Query:   234 NLIQHIVSVH 243
                QHI+  H
Sbjct:   784 EKNQHIMRHH 793

GO:0001541 "ovarian follicle development" evidence=IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007281 "germ cell development" evidence=IMP

GO:0007283 "spermatogenesis" evidence=IMP

GO:0007610 "behavior" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009566 "fertilization" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0016265 "death" evidence=IMP

GO:0035264 "multicellular organism growth" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048599 "oocyte development" evidence=IMP

GO:0048872 "homeostasis of number of cells" evidence=IMP

UNIPROTKB|F1LMV1 Zfx "Protein Zfx" [Rattus norvegicus (taxid:10116)]

 Score = 278 (102.9 bits), Expect = 3.2e-23, P = 3.2e-23
 Identities = 78/250 (31%), Positives = 106/250 (42%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNCNVLVPRD- 57
             S+ ++H+  H       C+ C   Y S +S  L TH+  KHS +   KC  C +L   D 
Sbjct:   555 SELKKHMRIHTGEKPYECQYC--EYRSADSSNLKTHVKTKHSKEMPFKCDIC-LLTFSDT 611

Query:    58 -EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHN 116
              E+  H  I H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH 
Sbjct:   612 KEVQQHALI-HQESKT---HQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHR 667

Query:   117 KATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNS 174
              + L KH+   HK   +  QC  C   +     L  HI   HT  L F C+RC   F   
Sbjct:   668 PSELKKHV-AAHKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQ 725

Query:   175 ATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDK 233
             + L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F    
Sbjct:   726 SELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPS 783

Query:   234 NLIQHIVSVH 243
                QHI+  H
Sbjct:   784 EKNQHIMRHH 793

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NQX8 ZFX "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 277 (102.6 bits), Expect = 4.1e-23, P = 4.1e-23
 Identities = 76/249 (30%), Positives = 104/249 (41%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNC-NVLVPRD 57
             S+ ++H+  H      +C+ C   Y S +S  L TH+  KHS +   KC  C        
Sbjct:   551 SELKKHMRIHTGEKPYQCQYC--EYRSADSSNLKTHVKTKHSKETSSKCDICFQTFSDTK 608

Query:    58 EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNK 117
             E+  H ++ H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH  
Sbjct:   609 ELQQH-TLMHQESKT---HQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRP 664

Query:   118 ATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSA 175
             + L KH+   HK   L  QC  C   +     L  HI   HT  L F C+RC   F    
Sbjct:   665 SELKKHV-AAHKGKKLH-QCRHCDFKIADPFILSRHILSVHTKDLPFRCKRCRKGFRQQN 722

Query:   176 TLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDKN 234
              L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F     
Sbjct:   723 ELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPSE 780

Query:   235 LIQHIVSVH 243
               QHI+  H
Sbjct:   781 KNQHIMRHH 789

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q95LI3 ZFY "Zinc finger Y-chromosomal protein" [Bos taurus (taxid:9913)]

 Score = 277 (102.6 bits), Expect = 4.2e-23, P = 4.2e-23
 Identities = 78/250 (31%), Positives = 105/250 (42%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNCNVLVPRD- 57
             S+ ++H+  H      +C+ C   Y S +S  L TH+  KHS +   KC  C +L   D 
Sbjct:   557 SELKKHMRIHTGEKPYQCQYC--EYRSADSSNLKTHVKTKHSKEMSFKCDIC-LLTFSDT 613

Query:    58 -EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHN 116
              E+  H  I H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH 
Sbjct:   614 KEVQQHALI-HQESKT---HQCVHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHR 669

Query:   117 KATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNS 174
              + L KH+   HK   +  QC  C   +     L  HI   HT  L F C+RC   F   
Sbjct:   670 PSELKKHV-AAHKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCKKGFRQQ 727

Query:   175 ATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDK 233
               L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F    
Sbjct:   728 NELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPS 785

Query:   234 NLIQHIVSVH 243
                QHI   H
Sbjct:   786 EKNQHITRHH 795

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MPG2 ZFX "Zinc finger X-chromosomal protein" [Bos taurus (taxid:9913)]

 Score = 276 (102.2 bits), Expect = 5.3e-23, P = 5.3e-23
 Identities = 78/250 (31%), Positives = 106/250 (42%)

Query:     2 SKYQQHLEEHK-VVIIRCETCTRNYESLES--LTTHLSFKHSNQFLMKCTNCNVLVPRD- 57
             S+ ++H+  H      +C+ C   Y S +S  L TH+  KHS +   KC  C +L   D 
Sbjct:   555 SELKKHMRIHTGEKPYQCQYC--EYRSADSSNLKTHVKTKHSKEMPFKCDIC-LLTFSDT 611

Query:    58 -EILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHN 116
              E+  H  I H +  T   ++C  C  K+++ + +  H    H  D    C  CD  FH 
Sbjct:   612 KEVQQHALI-HQESKT---HQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHR 667

Query:   117 KATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNS 174
              + L KH+   HK   +  QC  C   +     L  HI   HT  L F C+RC   F   
Sbjct:   668 PSELKKHV-AAHKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQ 725

Query:   175 ATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDK 233
               L KH+K     K YQC  C  S    +  KRH    H  D  H+  C YC   F    
Sbjct:   726 NELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CEYCKKGFRRPS 783

Query:   234 NLIQHIVSVH 243
                QHI+  H
Sbjct:   784 EKNQHIMRHH 793

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	254
KOG2462|consensus	279		99.97
KOG3608|consensus	467		99.96
KOG2462|consensus	279		99.93
KOG1074|consensus	958		99.91
KOG3608|consensus	467		99.9
KOG3623|consensus	1007		99.86
KOG1074|consensus	958		99.81
KOG3576|consensus	267		99.72
KOG3623|consensus	1007		99.61
KOG3576|consensus	267		99.61
PLN03086	567	PRLI-interacting factor K; Provisional	99.32
PHA00733	128	hypothetical protein	99.3
PLN03086	567	PRLI-interacting factor K; Provisional	99.23
PHA00733	128	hypothetical protein	99.2
PHA02768	55	hypothetical protein; Provisional	99.07
PHA02768	55	hypothetical protein; Provisional	99.04
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.93
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.87
KOG3993|consensus	500		98.78
PHA00616	44	hypothetical protein	98.74
KOG3993|consensus	500		98.61
PHA00732	79	hypothetical protein	98.57
PHA00616	44	hypothetical protein	98.49
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.41
PHA00732	79	hypothetical protein	98.36
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.17
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.15
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.95
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.94
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.94
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.85
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.84
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.84
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.66
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.65
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.63
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.3
smart00355	26	ZnF_C2H2 zinc finger.	97.29
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.28
smart00355	26	ZnF_C2H2 zinc finger.	96.89
PRK04860	160	hypothetical protein; Provisional	96.84
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.83
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.73
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.63
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.58
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.55
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.21
KOG2482|consensus	423		96.12
PRK04860	160	hypothetical protein; Provisional	95.66
KOG1146|consensus	1406		95.65
KOG2231|consensus	669		95.47
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.4
KOG2231|consensus	669		95.06
KOG2482|consensus	423		94.48
KOG1146|consensus	1406		94.34
COG4049	65	Uncharacterized protein containing archaeal-type C	94.14
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.13
KOG4173|consensus	253		94.09
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.02
KOG4173|consensus	253		93.66
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.54
PF12907	40	zf-met2: Zinc-binding	93.3
KOG2785|consensus	390		93.14
KOG2893|consensus	341		92.15
COG4049	65	Uncharacterized protein containing archaeal-type C	92.12
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.27
KOG2785|consensus	390		91.19
KOG2893|consensus	341		91.12
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	90.94
COG5236	493	Uncharacterized conserved protein, contains RING Z	90.53
COG5236	493	Uncharacterized conserved protein, contains RING Z	90.3
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	89.8
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	89.77
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.58
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.41
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	89.02
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	89.0
COG5048	467	FOG: Zn-finger [General function prediction only]	88.82
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	88.78
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	88.52
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	88.4
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	88.1
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	87.83
PRK06266	178	transcription initiation factor E subunit alpha; V	87.72
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	87.18
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.52
COG5048	467	FOG: Zn-finger [General function prediction only]	86.12
smart00531	147	TFIIE Transcription initiation factor IIE.	86.08
COG1592	166	Rubrerythrin [Energy production and conversion]	85.83
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	84.87
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	84.76
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.5
PHA00626	59	hypothetical protein	84.46
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	84.01
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	83.72
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	83.72
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	82.75
smart00531	147	TFIIE Transcription initiation factor IIE.	81.25
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	80.26
KOG2186|consensus	276		80.06

>KOG2462|consensus

Probab=99.97  E-value=3.6e-32  Score=198.23  Aligned_cols=139  Identities=27%  Similarity=0.506  Sum_probs=128.5

Q ss_pred             CCCCcccccchhhccChHHHHHHHHhhhcc-CCCcccccccccccCCHHHHHHHHHhcCCcccccCCCcccCCChHHHHH
Q psy12195        101 MDINMSCVPCDVLFHNKATLYKHLYLEHKA-TSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSK  179 (254)
Q Consensus       101 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~-~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~  179 (254)
                      ....|.|+.|++.+.+.++|-.|.+.|... ....+.|++|++.|.+...|..|++ +|..+.+|.+||+.|...+.|+.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHir-TH~l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIR-THTLPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhh-ccCCCcccccccccccchHHhhc
Confidence            445699999999999999999999986543 3446899999999999999999998 99999999999999999999999


Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHh
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV  242 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  242 (254)
                      |+++|+|||||.|+.|+|+|.++++|..|+. +|.+ .+.|+|+.|+|.|+..+.|..|.+.-
T Consensus       206 HiRTHTGEKPF~C~hC~kAFADRSNLRAHmQ-THS~-~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  206 HIRTHTGEKPFSCPHCGKAFADRSNLRAHMQ-THSD-VKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             ccccccCCCCccCCcccchhcchHHHHHHHH-hhcC-CccccCcchhhHHHHHHHHHHhhhhc
Confidence            9999999999999999999999999999998 7888 78999999999999999999998554

>KOG3608|consensus

Probab=99.96  E-value=1.6e-29  Score=189.38  Aligned_cols=231  Identities=23%  Similarity=0.474  Sum_probs=200.9

Q ss_pred             eeeec--ccccccCCCHHHHHhhhccccc------------Cc-ceeecC--cCCcccCCCCccchhhhhccCCCCCCcc
Q psy12195         14 VIIRC--ETCTRNYESLESLTTHLSFKHS------------NQ-FLMKCT--NCNVLVPRDEILPHLSIQHCQGTTPSIY   76 (254)
Q Consensus        14 ~~~~C--~~C~~~f~~~~~l~~H~~~~h~------------~~-~~~~C~--~C~~~~~~~~~l~~~~~~h~~~~~~~~~   76 (254)
                      ..|.|  ..|+..|.+..+|..|+.. |.            .+ ..+-|.  -|.+.+.++..|..|++.|   ++++..
T Consensus       133 ~~f~C~WedCe~~F~s~~ef~dHV~~-H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~H---s~eKvv  208 (467)
T KOG3608|consen  133 QNFRCGWEDCEREFVSIVEFQDHVVK-HALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTH---SNEKVV  208 (467)
T ss_pred             hhhccChhhcCCcccCHHHHHHHHHH-hhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhc---CCCeEE
Confidence            34566  5699999999999999886 43            11 224454  4888999999999888889   999999


Q ss_pred             cccccccccccHHHHHhHHhhhc-cCCCCcccccchhhccChHHHHHHHHhhhccCCCcccccccccccCCHHHHHHHHH
Q psy12195         77 ECNQCKEKTNDMTTMLNHYSVKH-YMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHIS  155 (254)
Q Consensus        77 ~C~~C~~~~~~~~~l~~h~~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~  155 (254)
                      .|+.||..|..+..|.+|.++.. ....+|.|..|.+.|.++..|..|+..+..    .|+|++|+.+....++|..|++
T Consensus       209 ACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn----~ykCplCdmtc~~~ssL~~H~r  284 (467)
T KOG3608|consen  209 ACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN----CYKCPLCDMTCSSASSLTTHIR  284 (467)
T ss_pred             ecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh----cccccccccCCCChHHHHHHHH
Confidence            99999999999999999985532 345689999999999999999999987432    6899999999999999999988


Q ss_pred             hcCC--cccccCCCcccCCChHHHHHHHhHhhCCCcccCCC--CcccCCCHHHHHHHHHHhhc-CCCCCccCcchhhccC
Q psy12195        156 QTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQAHN-DSVHQIQCPYCITDFS  230 (254)
Q Consensus       156 ~~~~--~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~-~~~~~~~C~~C~~~f~  230 (254)
                      ..|.  +||+|+.|+..+...+.|.+|..+|+ +-.|+|..  |..+|++...+.+|++.+|. .++.+|.|-+|++.|+
T Consensus       285 ~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft  363 (467)
T KOG3608|consen  285 YRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFT  363 (467)
T ss_pred             hhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhc
Confidence            6554  89999999999999999999999998 88899988  99999999999999999994 4456799999999999


Q ss_pred             CchHHHHHHHHhcCCCCCCCCCC
Q psy12195        231 EDKNLIQHIVSVHLGKEGTAPAR  253 (254)
Q Consensus       231 ~~~~l~~H~~~~h~~~~~~~c~~  253 (254)
                      +..+|..|+.+.|.-.-||.-+|
T Consensus       364 ~G~~L~~HL~kkH~f~~PsGh~R  386 (467)
T KOG3608|consen  364 SGKSLSAHLMKKHGFRLPSGHKR  386 (467)
T ss_pred             cchhHHHHHHHhhcccCCCCCCc
Confidence            99999999999999988887665

>KOG2462|consensus

Probab=99.93  E-value=5e-27  Score=171.43  Aligned_cols=116  Identities=22%  Similarity=0.483  Sum_probs=108.8

Q ss_pred             cccccccccccCCHHHHHHHHHhcCC----cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHH
Q psy12195        134 SIQCNMCSLVLDSKESLVTHISQTHT----LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHK  209 (254)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~h~~~~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  209 (254)
                      .|.|+.||+.+...+.|.+|......    +.+.|..||+.|.+-..|..|+++|+  -+.+|++|||+|...+-|+.|+
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHi  207 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHI  207 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccc
Confidence            68999999999999999999763322    77999999999999999999999998  7899999999999999999999


Q ss_pred             HHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        210 FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       210 ~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      + .|+| +|||.|+.|++.|++++||..|| .+|++.|+|+|.||
T Consensus       208 R-THTG-EKPF~C~hC~kAFADRSNLRAHm-QTHS~~K~~qC~~C  249 (279)
T KOG2462|consen  208 R-THTG-EKPFSCPHCGKAFADRSNLRAHM-QTHSDVKKHQCPRC  249 (279)
T ss_pred             c-cccC-CCCccCCcccchhcchHHHHHHH-HhhcCCccccCcch
Confidence            9 7888 89999999999999999999999 99999999999997

>KOG1074|consensus

Probab=99.91  E-value=8.1e-25  Score=180.69  Aligned_cols=170  Identities=22%  Similarity=0.445  Sum_probs=142.3

Q ss_pred             cccccccccccccHHHHHhHHhhhccCCCCcccccchhhccChHHHHHHHHhhhccCC---Cccccc---ccccccCCHH
Q psy12195         75 IYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATS---LSIQCN---MCSLVLDSKE  148 (254)
Q Consensus        75 ~~~C~~C~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~---~~~~C~---~C~~~f~~~~  148 (254)
                      +-.|-+|.+++.-.+.|..|+ +.|++++||.|.+||+.|.++.+|+.|+..|- ..+   .++.|+   +|.+.|.+.-
T Consensus       605 PNqCiiC~rVlSC~saLqmHy-rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHk-a~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHY-RTHTGERPFKCKICGRAFTTKGNLKAHMSVHK-AKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             ccceeeeeecccchhhhhhhh-hcccCcCccccccccchhccccchhhcccccc-cCccccccccCCchhhhcccccccc
Confidence            567999999999999999999 77999999999999999999999999998733 222   368899   9999999988


Q ss_pred             HHHHHHHhcCC---------------cccccCCCcccCCChHHHHHHHhHhhCC--------------------------
Q psy12195        149 SLVTHISQTHT---------------LMFTCRRCPSTFLNSATLSKHVKMEHNS--------------------------  187 (254)
Q Consensus       149 ~l~~h~~~~~~---------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------------  187 (254)
                      .|..|++ .|.               -.-+|..|.+.|.....+..++..+.++                          
T Consensus       683 ~lpQhIr-iH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~  761 (958)
T KOG1074|consen  683 TLPQHIR-IHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPEN  761 (958)
T ss_pred             cccceEE-eecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccc
Confidence            8888866 221               1256888888887777777777765211                          


Q ss_pred             --------------------------------------------------------------------------------
Q psy12195        188 --------------------------------------------------------------------------------  187 (254)
Q Consensus       188 --------------------------------------------------------------------------------  187 (254)
                                                                                                      
T Consensus       762 ~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~  841 (958)
T KOG1074|consen  762 SCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGL  841 (958)
T ss_pred             ccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccc
Confidence                                                                                            


Q ss_pred             ------------------------------------CcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCC
Q psy12195        188 ------------------------------------KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSE  231 (254)
Q Consensus       188 ------------------------------------~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~  231 (254)
                                                          ....|.+||+.|...+.|..|++ .|++ .++|.|..|++.|.+
T Consensus       842 ~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~r-THtg-~KPF~C~fC~~aFtt  919 (958)
T KOG1074|consen  842 ATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMR-THTG-PKPFFCHFCEEAFTT  919 (958)
T ss_pred             ccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhh-cCCC-CCCccchhhhhhhhh
Confidence                                                12789999999999999999999 7888 789999999999999


Q ss_pred             chHHHHHHHHhcCCCCCCC
Q psy12195        232 DKNLIQHIVSVHLGKEGTA  250 (254)
Q Consensus       232 ~~~l~~H~~~~h~~~~~~~  250 (254)
                      +.+|..|| .+|.+..|..
T Consensus       920 rgnLKvHM-gtH~w~q~~s  937 (958)
T KOG1074|consen  920 RGNLKVHM-GTHMWVQPPS  937 (958)
T ss_pred             hhhhhhhh-ccccccCCCc
Confidence            99999999 7999887754

>KOG3608|consensus

Probab=99.90  E-value=7.1e-24  Score=159.31  Aligned_cols=202  Identities=21%  Similarity=0.434  Sum_probs=174.6

Q ss_pred             eec--CcCCcccCCCCccchhhhhccCC----------CCCCcc--cccccccccccHHHHHhHHhhhccCCCCcccccc
Q psy12195         45 MKC--TNCNVLVPRDEILPHLSIQHCQG----------TTPSIY--ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPC  110 (254)
Q Consensus        45 ~~C--~~C~~~~~~~~~l~~~~~~h~~~----------~~~~~~--~C~~C~~~~~~~~~l~~h~~~~h~~~~~~~C~~C  110 (254)
                      +.|  +.|+..|.....+..|...|...          .....+  .+..|-..+.++..|+.|+ ..|.+++...|+.|
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~-r~Hs~eKvvACp~C  213 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHI-RTHSNEKVVACPHC  213 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHH-HhcCCCeEEecchH
Confidence            455  55999999998888666656321          111223  4567889999999999998 77999999999999


Q ss_pred             hhhccChHHHHHHHHhhhccCCCcccccccccccCCHHHHHHHHHhcCCcccccCCCcccCCChHHHHHHHhH-hhCCCc
Q psy12195        111 DVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKM-EHNSKS  189 (254)
Q Consensus       111 ~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~  189 (254)
                      |.-|.++..|..|.+........+|.|..|.+.|.....|..|+. .|-..|+|++|+......++|..|++. |...+|
T Consensus       214 g~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~-rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkp  292 (467)
T KOG3608|consen  214 GELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVV-RHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKP  292 (467)
T ss_pred             HHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHH-HhhhcccccccccCCCChHHHHHHHHhhhccCCC
Confidence            999999999999998877777779999999999999999999998 888999999999999999999999998 888999


Q ss_pred             ccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc--hhhccCCchHHHHHHHHhcCCCCC--CCC
Q psy12195        190 YQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVHLGKEG--TAP  251 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~--~~c  251 (254)
                      |+|..|++.|.+.+.|.+|+. .|++  ..|+|..  |..+|.+...|.+|++.+|.|..|  |.|
T Consensus       293 fKCd~Cd~~c~~esdL~kH~~-~HS~--~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~C  355 (467)
T KOG3608|consen  293 FKCDECDTRCVRESDLAKHVQ-VHSK--TVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYAC  355 (467)
T ss_pred             ccccchhhhhccHHHHHHHHH-hccc--cceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceee
Confidence            999999999999999999998 7775  3688977  999999999999999999966654  554

>KOG3623|consensus

Probab=99.86  E-value=5.7e-23  Score=167.46  Aligned_cols=109  Identities=21%  Similarity=0.461  Sum_probs=63.1

Q ss_pred             eeecccccccCCCHHHHHhhhccccc-CcceeecCcCCcccCCCCccchhhhhccCCC----------CCCccccccccc
Q psy12195         15 IIRCETCTRNYESLESLTTHLSFKHS-NQFLMKCTNCNVLVPRDEILPHLSIQHCQGT----------TPSIYECNQCKE   83 (254)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~~~~h~-~~~~~~C~~C~~~~~~~~~l~~~~~~h~~~~----------~~~~~~C~~C~~   83 (254)
                      ...|+.|+..|.....|+.|+...|. .+.-|.|..|.+.|-.+..|..|+..|....          ....|+|.+||+
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            44566666666666666666655332 2334566666666666666665554453221          123466666666


Q ss_pred             ccccHHHHHhHHhhhccCCCCcccccchhhccChHHHHHHH
Q psy12195         84 KTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHL  124 (254)
Q Consensus        84 ~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  124 (254)
                      .|..+..|..|+ ++|.|++||.|+.|++.|+-.+++-.||
T Consensus       290 AFKfKHHLKEHl-RIHSGEKPfeCpnCkKRFSHSGSySSHm  329 (1007)
T KOG3623|consen  290 AFKFKHHLKEHL-RIHSGEKPFECPNCKKRFSHSGSYSSHM  329 (1007)
T ss_pred             hhhhHHHHHhhh-eeecCCCCcCCcccccccccCCcccccc
Confidence            666666666665 5566666666666666666555555555

>KOG1074|consensus

Probab=99.81  E-value=1.2e-21  Score=162.27  Aligned_cols=84  Identities=27%  Similarity=0.550  Sum_probs=75.8

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCC---CCCccCc---chhhccCCch
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS---VHQIQCP---YCITDFSEDK  233 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~---~~~~~C~---~C~~~f~~~~  233 (254)
                      -|-+|-+|.++.+=.+.|+.|.++|+||+||+|.+||++|.++.+|+.|+. +|...   .-+|.||   +|.+.|+..-
T Consensus       604 dPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~-vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  604 DPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMS-VHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             CccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhccc-ccccCccccccccCCchhhhcccccccc
Confidence            348899999999999999999999999999999999999999999999997 55442   2468999   9999999999


Q ss_pred             HHHHHHHHhcCC
Q psy12195        234 NLIQHIVSVHLG  245 (254)
Q Consensus       234 ~l~~H~~~~h~~  245 (254)
                      .|.+|+ +.|.+
T Consensus       683 ~lpQhI-riH~~  693 (958)
T KOG1074|consen  683 TLPQHI-RIHLG  693 (958)
T ss_pred             cccceE-EeecC
Confidence            999999 88874

>KOG3576|consensus

Probab=99.72  E-value=3.2e-18  Score=119.54  Aligned_cols=112  Identities=20%  Similarity=0.390  Sum_probs=99.6

Q ss_pred             cccccccccccCCHHHHHHHHHhcCC--cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        134 SIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~h~~~~~~--~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      .|.|.+|++.|...--|.+|+. -|.  +.+-|..||+.|...-.|++|+++|+|.+||+|..|+|+|.+..+|..|++.
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~k-ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~k  195 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLK-CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKK  195 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhh-hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHH
Confidence            6889999999988888888887 444  7889999999999999999999999999999999999999999999999998


Q ss_pred             hhcCC---------CCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        212 AHNDS---------VHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       212 ~h~~~---------~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      +|+..         .+.|.|..||..-.....+..|++..|..-
T Consensus       196 vhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  196 VHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            88752         366999999999999999999997777543

>KOG3623|consensus

Probab=99.61  E-value=2.7e-16  Score=129.03  Aligned_cols=105  Identities=22%  Similarity=0.557  Sum_probs=90.3

Q ss_pred             cccccchhhccChHHHHHHHHhhhccCCCcccccccccccCCHHHHHHHHHhcCC---------------cccccCCCcc
Q psy12195        105 MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT---------------LMFTCRRCPS  169 (254)
Q Consensus       105 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~~~---------------~~~~C~~C~~  169 (254)
                      ..|++|++.+....+|+.|++..|...+-.|.|.+|..+|-.+..|.+|+. .|.               +.|+|.+||+
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~-~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQ-LHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHH-hhcCCCcccccccchhhhccccccccch
Confidence            689999999999999999999877666657899999999999999999976 332               5688999999


Q ss_pred             cCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        170 TFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       170 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      .|..+-.|+.|+++|.|||||.|+.|+|+|+-..++..|+.
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            99999999999999999999999999999988888888875

>KOG3576|consensus

Probab=99.61  E-value=7.3e-17  Score=112.80  Aligned_cols=88  Identities=30%  Similarity=0.505  Sum_probs=82.5

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHH
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      ..|.|.+|++.|.....|.+|+.-|...+.|-|..|||+|++--.|++|++ .|++ .+||+|.+|+|.|++...|..|+
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~r-thtg-vrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTR-THTG-VRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhc-cccC-ccccchhhhhHHHHhhccHHHHH
Confidence            569999999999999999999999999999999999999999999999999 7888 89999999999999999999999


Q ss_pred             HHhcCCCCCC
Q psy12195        240 VSVHLGKEGT  249 (254)
Q Consensus       240 ~~~h~~~~~~  249 (254)
                      +.+|.-...|
T Consensus       194 ~kvhgv~~~y  203 (267)
T KOG3576|consen  194 KKVHGVQHQY  203 (267)
T ss_pred             HHHcCchHHH
Confidence            9999765443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.32  E-value=7.1e-12  Score=103.47  Aligned_cols=147  Identities=17%  Similarity=0.388  Sum_probs=112.3

Q ss_pred             cccccccccccccHHHHHhHHhhhccCCCCccccc--chhhccChHHHHHHHHhhhccCCCcccccccccccCCHHHHHH
Q psy12195         75 IYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVP--CDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVT  152 (254)
Q Consensus        75 ~~~C~~C~~~~~~~~~l~~h~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  152 (254)
                      ...|+.|...... ..|..|. . +=.-..-.|+.  |+..|.. ..+..|           +.|+.|++.|. .+.|..
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe-~-~C~r~~V~Cp~~~Cg~v~~r-~el~~H-----------~~C~~Cgk~f~-~s~Lek  470 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHE-A-YCSRHNVVCPHDGCGIVLRV-EEAKNH-----------VHCEKCGQAFQ-QGEMEK  470 (567)
T ss_pred             eEECCCCCCccch-hHHHHHH-h-hCCCcceeCCcccccceeec-cccccC-----------ccCCCCCCccc-hHHHHH
Confidence            4579989877554 5566776 3 33345556874  9888732 333333           47999999996 678999


Q ss_pred             HHHhcCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCC----------CHHHHHHHHHHhhcCCCCCccC
Q psy12195        153 HISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFE----------RLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       153 h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      |+... ..++.|+ ||..+ ....|..|+.+|.+++++.|+.|++.|.          ..+.|..|... . + .+++.|
T Consensus       471 H~~~~-Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~-C-G-~rt~~C  544 (567)
T PLN03086        471 HMKVF-HEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI-C-G-SRTAPC  544 (567)
T ss_pred             HHHhc-CCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHh-c-C-CcceEc
Confidence            98844 5899999 99755 6789999999999999999999999995          24689999874 3 4 678999


Q ss_pred             cchhhccCCchHHHHHHHHhcC
Q psy12195        223 PYCITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       223 ~~C~~~f~~~~~l~~H~~~~h~  244 (254)
                      ..|++.+..+ .|..|+...|.
T Consensus       545 ~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        545 DSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             cccCCeeeeh-hHHHHHHHhhc
Confidence            9999888765 68899977774

>PHA00733 hypothetical protein

Probab=99.30  E-value=3.8e-12  Score=86.02  Aligned_cols=80  Identities=20%  Similarity=0.360  Sum_probs=54.2

Q ss_pred             cccccCCCcccCCChHHHHHH--H---hHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchH
Q psy12195        160 LMFTCRRCPSTFLNSATLSKH--V---KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKN  234 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H--~---~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~  234 (254)
                      +++.|++|+..|..+..|..+  +   ..+.+++||.|+.||+.|.+.+.|..|++. +   ..+|.|+.|++.|.....
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~-h---~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRY-T---EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhc-C---CcCccCCCCCCccCCHHH
Confidence            556666666666555544444  1   122347788888888888888888888763 3   235788888888888888


Q ss_pred             HHHHHHHhc
Q psy12195        235 LIQHIVSVH  243 (254)
Q Consensus       235 l~~H~~~~h  243 (254)
                      |..|+...|
T Consensus       115 L~~H~~~~h  123 (128)
T PHA00733        115 TLDHVCKKH  123 (128)
T ss_pred             HHHHHHHhc
Confidence            888886655

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.23  E-value=9.3e-11  Score=96.98  Aligned_cols=146  Identities=25%  Similarity=0.506  Sum_probs=88.8

Q ss_pred             eeecCcCCcccCCCCccchhhhhccCCCCCCccccc--ccccccccHHHHHhHHhhhccCCCCcccccchhhccChHHHH
Q psy12195         44 LMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECN--QCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLY  121 (254)
Q Consensus        44 ~~~C~~C~~~~~~~~~l~~~~~~h~~~~~~~~~~C~--~C~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~  121 (254)
                      ...|..|.+..+......|... -    .-....|+  .|+..|.. ..+          +..+.|+.|+..|. ...|.
T Consensus       407 ~V~C~NC~~~i~l~~l~lHe~~-C----~r~~V~Cp~~~Cg~v~~r-~el----------~~H~~C~~Cgk~f~-~s~Le  469 (567)
T PLN03086        407 TVECRNCKHYIPSRSIALHEAY-C----SRHNVVCPHDGCGIVLRV-EEA----------KNHVHCEKCGQAFQ-QGEME  469 (567)
T ss_pred             eEECCCCCCccchhHHHHHHhh-C----CCcceeCCcccccceeec-ccc----------ccCccCCCCCCccc-hHHHH
Confidence            4567777665555543322221 1    12234565  37766631 112          22246777777774 56677


Q ss_pred             HHHHhhhccCCCcccccccccccCCHHHHHHHHHh-cCCcccccCCCcccCC----------ChHHHHHHHhHhhCCCcc
Q psy12195        122 KHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQ-THTLMFTCRRCPSTFL----------NSATLSKHVKMEHNSKSY  190 (254)
Q Consensus       122 ~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~  190 (254)
                      .|+..+|    .++.|+ ||..+ .+..|..|+.. ...+++.|+.|+..|.          ....|..|..++ +.+++
T Consensus       470 kH~~~~H----kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~  542 (567)
T PLN03086        470 KHMKVFH----EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTA  542 (567)
T ss_pred             HHHHhcC----CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcce
Confidence            7777743    267777 77644 45677777652 2237788888887774          134688888875 88888


Q ss_pred             cCCCCcccCCCHHHHHHHHHHhhc
Q psy12195        191 QCNECPESFERLNKLKRHKFQAHN  214 (254)
Q Consensus       191 ~C~~C~~~f~~~~~l~~H~~~~h~  214 (254)
                      .|..||+.+. ...+..|+.+.|.
T Consensus       543 ~C~~Cgk~Vr-lrdm~~H~~~~h~  565 (567)
T PLN03086        543 PCDSCGRSVM-LKEMDIHQIAVHQ  565 (567)
T ss_pred             EccccCCeee-ehhHHHHHHHhhc
Confidence            8888888874 4567777776664

>PHA00733 hypothetical protein

Probab=99.20  E-value=3.5e-11  Score=81.31  Aligned_cols=80  Identities=18%  Similarity=0.342  Sum_probs=62.5

Q ss_pred             cccccccccccCCHHHHHH------HHHhcCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHH
Q psy12195        134 SIQCNMCSLVLDSKESLVT------HISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKR  207 (254)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~------h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  207 (254)
                      ++.|.+|...|.....|..      ++.....+||.|+.|++.|.....|..|++.+  +.+|.|++|+++|.....|.+
T Consensus        40 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~  117 (128)
T PHA00733         40 RLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLD  117 (128)
T ss_pred             hHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHH
Confidence            5666666666655444433      33334458999999999999999999999976  467999999999999999999


Q ss_pred             HHHHhhcC
Q psy12195        208 HKFQAHND  215 (254)
Q Consensus       208 H~~~~h~~  215 (254)
                      |+...|+-
T Consensus       118 H~~~~h~~  125 (128)
T PHA00733        118 HVCKKHNI  125 (128)
T ss_pred             HHHHhcCc
Confidence            99887754

>PHA02768 hypothetical protein; Provisional

Probab=99.07  E-value=5.6e-11  Score=66.05  Aligned_cols=42  Identities=19%  Similarity=0.384  Sum_probs=22.7

Q ss_pred             ccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHH
Q psy12195        190 YQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNL  235 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l  235 (254)
                      |.|++||+.|...++|.+|++. |.   ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~-H~---k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRK-HN---TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHh-cC---CcccCCcccceeccccee
Confidence            4555555555555555555553 32   245555555555555544

>PHA02768 hypothetical protein; Provisional

Probab=99.04  E-value=8.6e-11  Score=65.32  Aligned_cols=44  Identities=11%  Similarity=0.381  Sum_probs=40.7

Q ss_pred             ccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHH
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLK  206 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  206 (254)
                      .|.|+.||+.|.....|..|+++|+  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999999  7999999999999887764

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.93  E-value=2.8e-09  Score=60.77  Aligned_cols=53  Identities=28%  Similarity=0.557  Sum_probs=44.6

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcC
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  244 (254)
                      .|.||+|++. .+..+|..|....|....+.+.||+|...++  .+|..||...|.
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            4899999995 5678999999989988778899999998655  499999977763

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.87  E-value=1.2e-09  Score=51.99  Aligned_cols=26  Identities=31%  Similarity=0.756  Sum_probs=21.7

Q ss_pred             HHHHHHhHhhCCCcccCCCCcccCCC
Q psy12195        176 TLSKHVKMEHNSKSYQCNECPESFER  201 (254)
Q Consensus       176 ~l~~H~~~h~~~~~~~C~~C~~~f~~  201 (254)
                      +|..|+++|++++||.|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47788888999999999999888853

...

>KOG3993|consensus

Probab=98.78  E-value=9e-10  Score=85.97  Aligned_cols=167  Identities=19%  Similarity=0.306  Sum_probs=111.0

Q ss_pred             cccccccccccccHHHHHhHHhhhccCCCCcccccchhhccChHHHHHHHHhhhccCCCccc--ccccccccCCHHHHHH
Q psy12195         75 IYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQ--CNMCSLVLDSKESLVT  152 (254)
Q Consensus        75 ~~~C~~C~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~--C~~C~~~f~~~~~l~~  152 (254)
                      .|.|..|...|.+...|..|. -.-.....|.|+.|++.|+...+|..|.+.|-.... .-.  -+.=...-... .+..
T Consensus       267 dyiCqLCK~kYeD~F~LAQHr-C~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~e-aa~a~~~P~k~~~~~r-ae~~  343 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHR-CPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPE-AAKAGSPPPKQAVETR-AEVQ  343 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhcc-CCeeEEeeecCCcccccccCchhhhhhhcccCCchh-hhhcCCCChhhhhhhh-hhhh
Confidence            589999999999999999996 545666789999999999999999999988432221 111  00000000000 1111


Q ss_pred             HHHhc----CCcccccCCCcccCCChHHHHHHHhHhhCC-----------------------------------------
Q psy12195        153 HISQT----HTLMFTCRRCPSTFLNSATLSKHVKMEHNS-----------------------------------------  187 (254)
Q Consensus       153 h~~~~----~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------------------------  187 (254)
                      .....    .+.-|.|..|++.|.....|+.|+.+|...                                         
T Consensus       344 ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~  423 (500)
T KOG3993|consen  344 EAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLY  423 (500)
T ss_pred             hccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceee
Confidence            11111    124688888888888888888888876521                                         


Q ss_pred             -----CcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        188 -----KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       188 -----~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                           ....++++|-.+.++..-..+.+..+.  ...|.|.+|.-.|.+..+|.+|+..-|..+
T Consensus       424 ~a~sael~~pp~~~~ppsss~~sgg~~rlg~~--~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  424 VAGSAELELPPYDGSPPSSSGSSGGYGRLGIA--EQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             eeccccccCCCCCCCCcccCCCCCccccccch--hhccccccchHhhhcCcchHhHhhhcChHH
Confidence                 114677888777666554444432121  346889999999999999999987777543

>PHA00616 hypothetical protein

Probab=98.74  E-value=5e-09  Score=55.41  Aligned_cols=32  Identities=22%  Similarity=0.310  Sum_probs=19.1

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      +|+|+.||+.|.++++|..|+ +.|.|++|+.+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~-r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHL-LSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHH-HHhcCCCccce
Confidence            355666666666666666666 55555566554

>KOG3993|consensus

Probab=98.61  E-value=4.4e-09  Score=82.22  Aligned_cols=201  Identities=16%  Similarity=0.166  Sum_probs=127.3

Q ss_pred             eeeeecccccccCCCHHHHHhhhcccccCcceeecCcCCcccCCCCccchhhhhccCCCCCCcccccccccccccHHHHH
Q psy12195         13 VVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTML   92 (254)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~~~~~h~~~~~~~~~~C~~C~~~~~~~~~l~   92 (254)
                      ...|.|..|...|.+.-.|.+|... .-....|+|.+|+|.|....+|..|+++|.+..+...-.-+.=... .....+.
T Consensus       265 iGdyiCqLCK~kYeD~F~LAQHrC~-RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~-~~~rae~  342 (500)
T KOG3993|consen  265 IGDYICQLCKEKYEDAFALAQHRCP-RIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQA-VETRAEV  342 (500)
T ss_pred             HHHHHHHHHHHhhhhHHHHhhccCC-eeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhh-hhhhhhh
Confidence            5678899999999999999999876 5556679999999999999999999998854322110000000000 0000111


Q ss_pred             hHH--hhhccCCCCcccccchhhccChHHHHHHHHhhhccCCC---------------cccccccccccCCHHHHHHHHH
Q psy12195         93 NHY--SVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSL---------------SIQCNMCSLVLDSKESLVTHIS  155 (254)
Q Consensus        93 ~h~--~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~---------------~~~C~~C~~~f~~~~~l~~h~~  155 (254)
                      ...  ......+.-|.|..|++.|.....|+.|+..++.....               -+-+..++..+.....-..+..
T Consensus       343 ~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl  422 (500)
T KOG3993|consen  343 QEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVL  422 (500)
T ss_pred             hhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhccccccccccccccccccccccccee
Confidence            110  01113345799999999999999999998886633221               1224444443332222111110


Q ss_pred             h-cC-CcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        156 Q-TH-TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       156 ~-~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      . .. ..-..++.++..+.++..--.+.+.-..+..|.|.+|.-+|.+...|.+|+.+.|..
T Consensus       423 ~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  423 YVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             eeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChH
Confidence            0 00 122456778877766655444545455667899999999999999999999877755

>PHA00732 hypothetical protein

Probab=98.57  E-value=5.2e-08  Score=59.71  Aligned_cols=55  Identities=29%  Similarity=0.612  Sum_probs=36.2

Q ss_pred             ccccCCCcccCCChHHHHHHHhH-hhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKM-EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      ||.|+.|++.|.+...|..|++. |.   ++.|+.||++|.   .|..|.. ...+-.....|
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~-~~~~~~~~~~~   56 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFY-SQYDIEHLIYC   56 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhc-ccCCccceEEe
Confidence            56788888888888888888774 54   357888888886   4677764 33332333333

>PHA00616 hypothetical protein

Probab=98.49  E-value=5.3e-08  Score=51.53  Aligned_cols=25  Identities=28%  Similarity=0.635  Sum_probs=13.3

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhh
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h  213 (254)
                      ||+|+.||+.|.+++.|.+|++.+|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h   25 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH   25 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc
Confidence            4555555555555555555555333

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.41  E-value=1.5e-07  Score=44.74  Aligned_cols=26  Identities=38%  Similarity=0.829  Sum_probs=22.4

Q ss_pred             HHHHHHHHhhcCCCCCccCcchhhccCC
Q psy12195        204 KLKRHKFQAHNDSVHQIQCPYCITDFSE  231 (254)
Q Consensus       204 ~l~~H~~~~h~~~~~~~~C~~C~~~f~~  231 (254)
                      +|.+|++ .|.+ +++|.|+.|++.|.+
T Consensus         1 ~l~~H~~-~H~~-~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMR-THTG-EKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHH-HHSS-SSSEEESSSSEEESS
T ss_pred             CHHHHhh-hcCC-CCCCCCCCCcCeeCc
Confidence            5889999 6888 789999999999974

...

>PHA00732 hypothetical protein

Probab=98.36  E-value=3.1e-07  Score=56.35  Aligned_cols=44  Identities=30%  Similarity=0.575  Sum_probs=32.8

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      ||.|++||+.|.+.+.|..|++.+|.+    +.|+.|++.|+   .|..|+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~----~~C~~CgKsF~---~l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL----TKCPVCNKSYR---RLNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC----CccCCCCCEeC---Chhhhh
Confidence            577888888888888888887644433    46888888887   466776

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.17  E-value=7.2e-07  Score=41.14  Aligned_cols=21  Identities=38%  Similarity=0.801  Sum_probs=13.0

Q ss_pred             ccCcchhhccCCchHHHHHHH
Q psy12195        220 IQCPYCITDFSEDKNLIQHIV  240 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~~  240 (254)
                      |+|+.|++.|++.++|..|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            456666666666666666663

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.15  E-value=4e-06  Score=47.73  Aligned_cols=37  Identities=27%  Similarity=0.562  Sum_probs=14.4

Q ss_pred             cccccchhhccChHHHHHHHHhhhccCCCccccccccc
Q psy12195        105 MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSL  142 (254)
Q Consensus       105 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~  142 (254)
                      |.||.|++. .+...|..|....|..+...+.|++|..
T Consensus         3 f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~   39 (54)
T PF05605_consen    3 FTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSS   39 (54)
T ss_pred             cCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchh
Confidence            334444442 2233344444443433333344444443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.95  E-value=4.8e-06  Score=38.70  Aligned_cols=22  Identities=36%  Similarity=0.765  Sum_probs=10.9

Q ss_pred             ccCcchhhccCCchHHHHHHHH
Q psy12195        220 IQCPYCITDFSEDKNLIQHIVS  241 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~~~  241 (254)
                      |.|++|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            3455555555555555555533

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.94  E-value=6.3e-06  Score=37.91  Aligned_cols=22  Identities=41%  Similarity=0.786  Sum_probs=15.5

Q ss_pred             ccCCCCcccCCCHHHHHHHHHH
Q psy12195        190 YQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      |.|++|++.|.+...|.+|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5677777777777777777664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.94  E-value=1.8e-06  Score=65.44  Aligned_cols=54  Identities=24%  Similarity=0.552  Sum_probs=45.6

Q ss_pred             CCCcccCCC--CcccCCCHHHHHHHHHHhhcC-----------------CCCCccCcchhhccCCchHHHHHH
Q psy12195        186 NSKSYQCNE--CPESFERLNKLKRHKFQAHND-----------------SVHQIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       186 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~-----------------~~~~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      +++||+||+  |.|++.....|+.|+.-.|..                 +.+||+|++|+|.+.....|.-|.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            358999987  999999999999999754411                 248999999999999999998885

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.85  E-value=1.5e-05  Score=36.96  Aligned_cols=24  Identities=33%  Similarity=0.708  Sum_probs=15.9

Q ss_pred             ccCCCCcccCCCHHHHHHHHHHhh
Q psy12195        190 YQCNECPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~~~h  213 (254)
                      |.|++|++.|.+...|..|+..+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777776543

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.84  E-value=9.6e-06  Score=52.86  Aligned_cols=23  Identities=26%  Similarity=0.658  Sum_probs=0.0

Q ss_pred             ccccccccCCHHHHHHHHHhcCC
Q psy12195        137 CNMCSLVLDSKESLVTHISQTHT  159 (254)
Q Consensus       137 C~~C~~~f~~~~~l~~h~~~~~~  159 (254)
                      |..|+..|.+...|..|+...|.
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~   24 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHG   24 (100)
T ss_dssp             -----------------------
T ss_pred             ccccccccccccccccccccccc
Confidence            55566666555555555544444

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.84  E-value=1.1e-05  Score=52.55  Aligned_cols=21  Identities=33%  Similarity=0.890  Sum_probs=9.5

Q ss_pred             ccCcchhhccCCchHHHHHHH
Q psy12195        220 IQCPYCITDFSEDKNLIQHIV  240 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~~  240 (254)
                      +.|..|++.|.+...|..||+
T Consensus        51 ~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen   51 FRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             EEBSSSS-EESSHHHHHHHHH
T ss_pred             CCCCccCCCCcCHHHHHHHHc
Confidence            444444444444444444443

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.66  E-value=2.2e-05  Score=37.61  Aligned_cols=20  Identities=30%  Similarity=0.506  Sum_probs=9.0

Q ss_pred             ccCcchhhccCCchHHHHHH
Q psy12195        220 IQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~  239 (254)
                      |+|..|++.|.+..+|..|+
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~   21 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHK   21 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCccCCccCChhHHHHHh
Confidence            34444444444444444444

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.65  E-value=9.5e-06  Score=61.69  Aligned_cols=52  Identities=27%  Similarity=0.597  Sum_probs=44.5

Q ss_pred             CcccccCC--CcccCCChHHHHHHHhH-hh------------------CCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        159 TLMFTCRR--CPSTFLNSATLSKHVKM-EH------------------NSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       159 ~~~~~C~~--C~~~f~~~~~l~~H~~~-h~------------------~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ++||+|++  |.+.+.+...|+-|+.- |.                  .+|||.|++|+|++.....|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            48899976  88999999999999875 31                  2489999999999999999999975

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.63  E-value=1.5e-05  Score=38.24  Aligned_cols=25  Identities=32%  Similarity=0.797  Sum_probs=22.4

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhh
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h  213 (254)
                      ||.|..|++.|.+...|..|++.++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999997543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.30  E-value=8e-05  Score=40.38  Aligned_cols=30  Identities=27%  Similarity=0.514  Sum_probs=17.5

Q ss_pred             CCCCccCcchhhccCCchHHHHHHHHhcCC
Q psy12195        216 SVHQIQCPYCITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       216 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      ++.+-.||+|+..+.+..+|.+|+++.|..
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            356667777777777777777777666643

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.29  E-value=0.00023  Score=33.43  Aligned_cols=20  Identities=30%  Similarity=0.685  Sum_probs=11.8

Q ss_pred             ccCcchhhccCCchHHHHHH
Q psy12195        220 IQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~  239 (254)
                      |+|+.|++.|.+.+.|..|+
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~   20 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHM   20 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHH
Confidence            34566666666666666665

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.28  E-value=0.00015  Score=33.55  Aligned_cols=23  Identities=35%  Similarity=0.648  Sum_probs=13.4

Q ss_pred             ccCcchhhccCCchHHHHHHHHhc
Q psy12195        220 IQCPYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      |+|+.|+...+ .++|.+|++..|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45677776666 667777765544

>smart00355 ZnF_C2H2 zinc finger

Probab=96.89  E-value=0.0012  Score=30.77  Aligned_cols=21  Identities=38%  Similarity=0.778  Sum_probs=13.2

Q ss_pred             ccCCCCcccCCCHHHHHHHHH
Q psy12195        190 YQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      |.|+.|+++|.....|..|++
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH
Confidence            456666666666666666665

>PRK04860 hypothetical protein; Provisional

Probab=96.84  E-value=0.00078  Score=47.48  Aligned_cols=38  Identities=21%  Similarity=0.672  Sum_probs=28.6

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCC
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFER  201 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  201 (254)
                      -+|.|. |+.   ....+..|.++++++++|.|..|+..|..
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            367887 876   55677788888888888888888877754

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.83  E-value=0.00043  Score=32.33  Aligned_cols=20  Identities=35%  Similarity=0.760  Sum_probs=14.3

Q ss_pred             ccCcchhhccCCchHHHHHH
Q psy12195        220 IQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~  239 (254)
                      |.|.+|++.|++...|..|+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHH
Confidence            45777777777777777776

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.73  E-value=0.0017  Score=29.91  Aligned_cols=23  Identities=39%  Similarity=0.703  Sum_probs=13.6

Q ss_pred             ccCCCCcccCCCHHHHHHHHHHhh
Q psy12195        190 YQCNECPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~~~h  213 (254)
                      |+|+.|+.... ...|.+|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56667776666 666777766554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.63  E-value=0.0013  Score=30.62  Aligned_cols=18  Identities=39%  Similarity=0.837  Sum_probs=7.7

Q ss_pred             CCCCcccCCCHHHHHHHH
Q psy12195        192 CNECPESFERLNKLKRHK  209 (254)
Q Consensus       192 C~~C~~~f~~~~~l~~H~  209 (254)
                      |.+|++.|.+...|..|+
T Consensus         3 C~~C~~~f~s~~~~~~H~   20 (25)
T PF12874_consen    3 CDICNKSFSSENSLRQHL   20 (25)
T ss_dssp             ETTTTEEESSHHHHHHHH
T ss_pred             CCCCCCCcCCHHHHHHHH
Confidence            444444444444444443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.58  E-value=0.0025  Score=34.69  Aligned_cols=30  Identities=20%  Similarity=0.355  Sum_probs=17.4

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        186 NSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       186 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      .+.|-.||+|+..+++..+|.+|+...|..
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcc
Confidence            456777777777777777777777666644

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.55  E-value=0.00039  Score=33.19  Aligned_cols=20  Identities=35%  Similarity=0.660  Sum_probs=14.1

Q ss_pred             ccCcchhhccCCchHHHHHH
Q psy12195        220 IQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~  239 (254)
                      |.|..|++.|++...|..|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~   21 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHM   21 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCT
T ss_pred             CCcccCCCCcCCHHHHHHHH
Confidence            56777777777777776666

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.21  E-value=0.0034  Score=29.86  Aligned_cols=22  Identities=23%  Similarity=0.649  Sum_probs=20.1

Q ss_pred             eecccccccCCCHHHHHhhhcc
Q psy12195         16 IRCETCTRNYESLESLTTHLSF   37 (254)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~~~   37 (254)
                      |-|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999999876

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=96.12  E-value=0.021  Score=44.53  Aligned_cols=147  Identities=15%  Similarity=0.307  Sum_probs=84.3

Q ss_pred             HHHhHHhhhccCCCCcccccchhhcc-ChHHHHHHHHhhhccCC--------------------CcccccccccccCCHH
Q psy12195         90 TMLNHYSVKHYMDINMSCVPCDVLFH-NKATLYKHLYLEHKATS--------------------LSIQCNMCSLVLDSKE  148 (254)
Q Consensus        90 ~l~~h~~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~~~~~~--------------------~~~~C~~C~~~f~~~~  148 (254)
                      .|..++...-......+|-.|...+. .++.+..|+-..|+-.-                    ..+.|.+|.+.|.++.
T Consensus       130 aLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkn  209 (423)
T KOG2482|consen  130 ALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKN  209 (423)
T ss_pred             HHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcH
Confidence            34455433333445567877866543 45666667654443211                    1356888888888888


Q ss_pred             HHHHHHHhcCCc---c--------ccc--CCCcccCCChHHHHHHH--hHh--h-------------CCCc--ccCCCCc
Q psy12195        149 SLVTHISQTHTL---M--------FTC--RRCPSTFLNSATLSKHV--KME--H-------------NSKS--YQCNECP  196 (254)
Q Consensus       149 ~l~~h~~~~~~~---~--------~~C--~~C~~~f~~~~~l~~H~--~~h--~-------------~~~~--~~C~~C~  196 (254)
                      .|+.||+..+-+   |        |.=  ..=|++-.   ....+-  .+-  .             +..+  ..|-.|.
T Consensus       210 tLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t---~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~  286 (423)
T KOG2482|consen  210 TLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWT---IVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCT  286 (423)
T ss_pred             HHHHHHHhccCcccCCCccccceEEEEeHhhcCCccc---hhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeec
Confidence            888887633211   1        000  00011110   111111  110  0             0112  5888898


Q ss_pred             ccCCCHHHHHHHHHHhhcCC-------------------------CCCccCcchhhccCCchHHHHHH
Q psy12195        197 ESFERLNKLKRHKFQAHNDS-------------------------VHQIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       197 ~~f~~~~~l~~H~~~~h~~~-------------------------~~~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      ...-+...|..|++.+|.-.                         .+.-.|-.|..+|.....|..||
T Consensus       287 ~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  287 NFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             cchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            88888888999988777421                         12235888999999999999998

>PRK04860 hypothetical protein; Provisional

Probab=95.66  E-value=0.0049  Score=43.53  Aligned_cols=40  Identities=20%  Similarity=0.416  Sum_probs=32.0

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCch
Q psy12195        188 KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDK  233 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~  233 (254)
                      -+|.|. |+.   ...++.+|.+ .+.+ .++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~r-i~~g-~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNR-VVRG-EAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHH-HhcC-CccEECCCCCceeEEec
Confidence            479998 987   6778889988 5666 67899999998876543

>KOG1146|consensus

Probab=95.65  E-value=0.0029  Score=57.66  Aligned_cols=61  Identities=21%  Similarity=0.347  Sum_probs=43.9

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHHh-hc----------------------------------------CCCCCccCcchh
Q psy12195        188 KSYQCNECPESFERLNKLKRHKFQA-HN----------------------------------------DSVHQIQCPYCI  226 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~~~-h~----------------------------------------~~~~~~~C~~C~  226 (254)
                      ++|.|..|..++..+.+|..|+... |.                                        .....|.|.+|+
T Consensus       517 ~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~  596 (1406)
T KOG1146|consen  517 KPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCS  596 (1406)
T ss_pred             CcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhc
Confidence            5788888888888888888886421 10                                        001248899999


Q ss_pred             hccCCchHHHHHHHHhcCCCCC
Q psy12195        227 TDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       227 ~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      ...+-..+|..||...+....|
T Consensus       597 yetniarnlrihmtss~~s~~p  618 (1406)
T KOG1146|consen  597 YETNIARNLRIHMTASPSSSPP  618 (1406)
T ss_pred             chhhhhhccccccccCCCCCCh
Confidence            9999999999999776655443

>KOG2231|consensus

Probab=95.47  E-value=0.057  Score=46.66  Aligned_cols=69  Identities=25%  Similarity=0.576  Sum_probs=39.7

Q ss_pred             cccCCCcccCCChHHHHHHHhHhhCCCcccCCCC------cccCCCHHHHHHHHHHhhcCCCCCccCc--chh-hccCCc
Q psy12195        162 FTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNEC------PESFERLNKLKRHKFQAHNDSVHQIQCP--YCI-TDFSED  232 (254)
Q Consensus       162 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~~h~~~~~~~~C~--~C~-~~f~~~  232 (254)
                      -.|..|...|.....|..|++.+.    |.|-.|      +.-|.....|..|.+..|      |.|.  .|. +.|...
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H------flCE~~~C~~~~f~~~  252 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH------FLCEEEFCRTKKFYVA  252 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC------ccccccccccceeeeh
Confidence            356777777777777777776533    233333      455666677777777444      4455  453 344444


Q ss_pred             hHHHHHHH
Q psy12195        233 KNLIQHIV  240 (254)
Q Consensus       233 ~~l~~H~~  240 (254)
                      -.+.++++
T Consensus       253 ~~~ei~lk  260 (669)
T KOG2231|consen  253 FELEIELK  260 (669)
T ss_pred             hHHHHHHH
Confidence            44555553

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.40  E-value=0.013  Score=27.22  Aligned_cols=18  Identities=33%  Similarity=0.733  Sum_probs=9.3

Q ss_pred             cCcchhhccCCchHHHHHH
Q psy12195        221 QCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       221 ~C~~C~~~f~~~~~l~~H~  239 (254)
                      .|+.|++.| ..+.|..|+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            455555555 444455554

>KOG2231|consensus

Probab=95.06  E-value=0.14  Score=44.40  Aligned_cols=19  Identities=21%  Similarity=0.590  Sum_probs=9.2

Q ss_pred             ccccccccCCHHHHHHHHH
Q psy12195        137 CNMCSLVLDSKESLVTHIS  155 (254)
Q Consensus       137 C~~C~~~f~~~~~l~~h~~  155 (254)
                      |..|...|.....|..|++
T Consensus       185 C~~C~~~fld~~el~rH~~  203 (669)
T KOG2231|consen  185 CKFCHERFLDDDELYRHLR  203 (669)
T ss_pred             chhhhhhhccHHHHHHhhc
Confidence            4444444444444444444

>KOG2482|consensus

Probab=94.48  E-value=0.13  Score=40.41  Aligned_cols=22  Identities=32%  Similarity=0.448  Sum_probs=18.5

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      .-.|-.|.-.|.....|..|+.
T Consensus       334 ~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  334 KSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             ccccccccccccCcchhhhhcc
Confidence            4577888899999999999986

>KOG1146|consensus

Probab=94.34  E-value=0.018  Score=52.87  Aligned_cols=76  Identities=17%  Similarity=0.288  Sum_probs=55.5

Q ss_pred             CCcccCCChHHHHHHHhH-hhCCCcccCCCCcccCCCHHHHHHHHHHhhcC-----------------------CCCCcc
Q psy12195        166 RCPSTFLNSATLSKHVKM-EHNSKSYQCNECPESFERLNKLKRHKFQAHND-----------------------SVHQIQ  221 (254)
Q Consensus       166 ~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-----------------------~~~~~~  221 (254)
                      .++..+.....+..|+.. +.-.+-|.|+.|+-.|.....|..|++..|..                       ..++|.
T Consensus       441 ~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~  520 (1406)
T KOG1146|consen  441 KAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYP  520 (1406)
T ss_pred             chhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCccc
Confidence            344444444444444433 45567899999999999999999999875532                       136799


Q ss_pred             CcchhhccCCchHHHHHHHH
Q psy12195        222 CPYCITDFSEDKNLIQHIVS  241 (254)
Q Consensus       222 C~~C~~~f~~~~~l~~H~~~  241 (254)
                      |..|..+++++-+|-+||..
T Consensus       521 C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  521 CRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ceeeeeeeecchHHHHHHHH
Confidence            99999999999999999854

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.14  E-value=0.027  Score=31.24  Aligned_cols=30  Identities=27%  Similarity=0.491  Sum_probs=24.0

Q ss_pred             hCCCcccCCCCcccCCCHHHHHHHHHHhhc
Q psy12195        185 HNSKSYQCNECPESFERLNKLKRHKFQAHN  214 (254)
Q Consensus       185 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  214 (254)
                      .||..+.||-||..|+......+|+...|.
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            467778888888888888888888876664

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.13  E-value=0.032  Score=28.22  Aligned_cols=23  Identities=17%  Similarity=0.537  Sum_probs=18.5

Q ss_pred             CccCcchhhccCCchHHHHHHHH
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVS  241 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~  241 (254)
                      +|.|.+|++.|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47788999888888888888743

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=94.09  E-value=0.013  Score=42.16  Aligned_cols=87  Identities=23%  Similarity=0.490  Sum_probs=59.9

Q ss_pred             eeeeeccc--ccccCCCHHHHHhhhcccccCcceeecCcCCcccCCCCccc-hhhhhccC------CCCCCcccc--ccc
Q psy12195         13 VVIIRCET--CTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILP-HLSIQHCQ------GTTPSIYEC--NQC   81 (254)
Q Consensus        13 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~-~~~~~h~~------~~~~~~~~C--~~C   81 (254)
                      ...|.|++  |-..|...++...|+.+.|.+    .|..|.+.|+....|. |+...|-.      .-+...|.|  ..|
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            34566866  778899999999998875654    4999999999999999 77776610      012344556  456


Q ss_pred             ccccccHHHHHhHHhhhccCCC
Q psy12195         82 KEKTNDMTTMLNHYSVKHYMDI  103 (254)
Q Consensus        82 ~~~~~~~~~l~~h~~~~h~~~~  103 (254)
                      +..|.+...-.+|++..|.-..
T Consensus       153 t~KFkT~r~RkdH~I~~Hk~Pa  174 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMHKYPA  174 (253)
T ss_pred             hhhhhhhhhhhhHHHHhccCCc
Confidence            6666666666666655554433

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.02  E-value=0.049  Score=27.51  Aligned_cols=22  Identities=18%  Similarity=0.419  Sum_probs=17.6

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +|.|.+|++.|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5778888888888888888874

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=93.66  E-value=0.046  Score=39.49  Aligned_cols=79  Identities=25%  Similarity=0.512  Sum_probs=45.7

Q ss_pred             ccccc--cccccCCHHHHHHHHHhcCCcccccCCCcccCCChHHHHHHHhHh----------hCCCcccCC--CCcccCC
Q psy12195        135 IQCNM--CSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKME----------HNSKSYQCN--ECPESFE  200 (254)
Q Consensus       135 ~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h----------~~~~~~~C~--~C~~~f~  200 (254)
                      |.|+.  |-..|.+..+...|-...|+.  .|+.|.+.|.....|..|+...          .|...|+|-  .|+..|.
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~--sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFk  157 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN--SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFK  157 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc--hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhh
Confidence            44544  444555444444443323332  5666666666666666665542          245567774  4888888


Q ss_pred             CHHHHHHHHHHhhcC
Q psy12195        201 RLNKLKRHKFQAHND  215 (254)
Q Consensus       201 ~~~~l~~H~~~~h~~  215 (254)
                      +...-.+|+-..|.-
T Consensus       158 T~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  158 TSRDRKDHMIRMHKY  172 (253)
T ss_pred             hhhhhhhHHHHhccC
Confidence            777777777666644

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.54  E-value=0.04  Score=27.54  Aligned_cols=9  Identities=22%  Similarity=0.781  Sum_probs=4.0

Q ss_pred             ccCCCcccC
Q psy12195        163 TCRRCPSTF  171 (254)
Q Consensus       163 ~C~~C~~~f  171 (254)
                      .|..||..+
T Consensus         3 ~C~~CGy~y   11 (33)
T cd00350           3 VCPVCGYIY   11 (33)
T ss_pred             ECCCCCCEE
Confidence            444444443

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF12907 zf-met2: Zinc-binding

Probab=93.30  E-value=0.053  Score=28.31  Aligned_cols=32  Identities=22%  Similarity=0.362  Sum_probs=24.1

Q ss_pred             ccCcchhhcc---CCchHHHHHHHHhcCCCCCCCC
Q psy12195        220 IQCPYCITDF---SEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       220 ~~C~~C~~~f---~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      ++|.+|...|   +....|..|....|++..+-.|
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~~~C   36 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNTFEEC   36 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCCHHHc
Confidence            6799998544   4556799999889988766555

>KOG2785|consensus

Probab=93.14  E-value=0.52  Score=37.75  Aligned_cols=55  Identities=20%  Similarity=0.326  Sum_probs=44.5

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHHhhcCC---------------------CCCccCcchh---hccCCchHHHHHHHHh
Q psy12195        188 KSYQCNECPESFERLNKLKRHKFQAHNDS---------------------VHQIQCPYCI---TDFSEDKNLIQHIVSV  242 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~---------------------~~~~~C~~C~---~~f~~~~~l~~H~~~~  242 (254)
                      .|-.|-.|++.+.+.-.-..||...|+-=                     ...|.|-.|.   +.|.+......||...
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K  243 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDK  243 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhc
Confidence            35789999999999999999998777530                     2347788888   8999999999998543

>KOG2893|consensus

Probab=92.15  E-value=0.028  Score=41.55  Aligned_cols=48  Identities=25%  Similarity=0.394  Sum_probs=26.4

Q ss_pred             eecCcCCcccCCCCccchhhhhccCCCCCCcccccccccccccHHHHHhHHhhhc
Q psy12195         45 MKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKH   99 (254)
Q Consensus        45 ~~C~~C~~~~~~~~~l~~~~~~h~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~h   99 (254)
                      -+|.+|++.|..+..|.    +|   ...+.|+|.+|.+.+.+--.|..|-+.+|
T Consensus        11 pwcwycnrefddekili----qh---qkakhfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILI----QH---QKAKHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             ceeeecccccchhhhhh----hh---hhhccceeeeehhhhccCCCceeehhhhh
Confidence            36777777776665433    23   33456677777665554444555543334

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.12  E-value=0.064  Score=29.78  Aligned_cols=30  Identities=17%  Similarity=0.409  Sum_probs=25.5

Q ss_pred             hcceeeeecccccccCCCHHHHHhhhcccc
Q psy12195         10 EHKVVIIRCETCTRNYESLESLTTHLSFKH   39 (254)
Q Consensus        10 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h   39 (254)
                      ..|+.-++||-|+..|+..-+..+|....|
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            457888999999999999999989987644

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.27  E-value=0.46  Score=31.35  Aligned_cols=25  Identities=24%  Similarity=0.379  Sum_probs=22.1

Q ss_pred             CccC----cchhhccCCchHHHHHHHHhc
Q psy12195        219 QIQC----PYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       219 ~~~C----~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      .|.|    +.|+..+.+...|..|++..|
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            3889    999999999999999997766

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2785|consensus

Probab=91.19  E-value=0.47  Score=37.98  Aligned_cols=24  Identities=17%  Similarity=0.483  Sum_probs=18.9

Q ss_pred             eeecccccccCCCHHHHHhhhccc
Q psy12195         15 IIRCETCTRNYESLESLTTHLSFK   38 (254)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~~~~   38 (254)
                      .|.|..|...|.+...-+.|+.+.
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSd   26 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSD   26 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhh
Confidence            478888888888887777787764

>KOG2893|consensus

Probab=91.12  E-value=0.07  Score=39.51  Aligned_cols=41  Identities=22%  Similarity=0.480  Sum_probs=20.1

Q ss_pred             CCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHH
Q psy12195        192 CNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQH  238 (254)
Q Consensus       192 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H  238 (254)
                      |=+|++.|.+...|..|++      .+-|+|-.|-|..-+...|.+|
T Consensus        13 cwycnrefddekiliqhqk------akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQK------AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhh------hccceeeeehhhhccCCCceee
Confidence            4445555555555555544      3345555555444444444444

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=90.94  E-value=0.19  Score=37.87  Aligned_cols=81  Identities=17%  Similarity=0.326  Sum_probs=45.7

Q ss_pred             hcceeeeecccccccCCCHHHHHhhhccccc-CcceeecCcCCcccCCCCc-----c-c-hhhhhccCCCCCCccccccc
Q psy12195         10 EHKVVIIRCETCTRNYESLESLTTHLSFKHS-NQFLMKCTNCNVLVPRDEI-----L-P-HLSIQHCQGTTPSIYECNQC   81 (254)
Q Consensus        10 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~-~~~~~~C~~C~~~~~~~~~-----l-~-~~~~~h~~~~~~~~~~C~~C   81 (254)
                      .||-++|+|..|+...-....| .|+.+... ....|+|..|++.....-.     + . |.++.-......++++|+.|
T Consensus       137 ~hGGrif~CsfC~~flCEDDQF-EHQAsCQvLe~E~~KC~SCNrlGq~sCLRCK~cfCddHvrrKg~ky~k~k~~PCPKC  215 (314)
T PF06524_consen  137 DHGGRIFKCSFCDNFLCEDDQF-EHQASCQVLESETFKCQSCNRLGQYSCLRCKICFCDDHVRRKGFKYEKGKPIPCPKC  215 (314)
T ss_pred             cCCCeEEEeecCCCeeeccchh-hhhhhhhhhhcccccccccccccchhhhheeeeehhhhhhhcccccccCCCCCCCCC
Confidence            4678899999998777666666 55554222 2346888888765443311     1 1 22222222234466777777


Q ss_pred             ccccccHHHH
Q psy12195         82 KEKTNDMTTM   91 (254)
Q Consensus        82 ~~~~~~~~~l   91 (254)
                      +........|
T Consensus       216 g~et~eTkdL  225 (314)
T PF06524_consen  216 GYETQETKDL  225 (314)
T ss_pred             CCcccccccc
Confidence            7655544444

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=90.53  E-value=0.51  Score=37.22  Aligned_cols=124  Identities=21%  Similarity=0.363  Sum_probs=66.7

Q ss_pred             chhhccChHHHHHHHHhhhccCCCcccccccc---ccc------CCHHHHHHHHHhcCC-----cccccCCCcccCCChH
Q psy12195        110 CDVLFHNKATLYKHLYLEHKATSLSIQCNMCS---LVL------DSKESLVTHISQTHT-----LMFTCRRCPSTFLNSA  175 (254)
Q Consensus       110 C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~---~~f------~~~~~l~~h~~~~~~-----~~~~C~~C~~~f~~~~  175 (254)
                      |+........|..|.+..|.    .+.|.+|.   +.|      .+...|..|...-.+     ..-.|..|...|-+..
T Consensus       159 c~~~C~~~k~lk~H~K~~H~----~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~FYdDD  234 (493)
T COG5236         159 CHRRCGSLKELKKHYKAQHG----FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIYFYDDD  234 (493)
T ss_pred             hhhhhhhHHHHHHHHHhhcC----cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccceecChH
Confidence            44444445666677665444    34455553   222      223455555431111     2234777777777777


Q ss_pred             HHHHHHhHhhCCCcccCCC----CcccCCCHHHHHHHHHHhhcCCCCCccCcc--hh----hccCCchHHHHHHHHhcC
Q psy12195        176 TLSKHVKMEHNSKSYQCNE----CPESFERLNKLKRHKFQAHNDSVHQIQCPY--CI----TDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       176 ~l~~H~~~h~~~~~~~C~~----C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~--C~----~~f~~~~~l~~H~~~~h~  244 (254)
                      .|..|++..+ ++-|.|..    =..-|.+...|-+|.+..      -|.|.+  |.    ..|...-.|+.|+-+.|.
T Consensus       235 EL~~HcR~~H-E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~------hy~ct~qtc~~~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         235 ELRRHCRLRH-EACHICDMVGPIRYQYFKSYEDLEAHFRNA------HYCCTFQTCRVGKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             HHHHHHHhhh-hhhhhhhccCccchhhhhCHHHHHHHhhcC------ceEEEEEEEecCcEEEeccHHHHHHHHHHHhh
Confidence            7777777533 22233321    123466667777776522      354533  32    357777778888766664

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=90.30  E-value=0.32  Score=38.30  Aligned_cols=103  Identities=26%  Similarity=0.431  Sum_probs=69.6

Q ss_pred             cccccc--cccccCCHHHHHHHHHhcCCcccccCCC---cccCC------ChHHHHHHHhHhhCC----CcccCCCCccc
Q psy12195        134 SIQCNM--CSLVLDSKESLVTHISQTHTLMFTCRRC---PSTFL------NSATLSKHVKMEHNS----KSYQCNECPES  198 (254)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~C~~C---~~~f~------~~~~l~~H~~~h~~~----~~~~C~~C~~~  198 (254)
                      .|.|+.  |..+......|..|....|.+ +.|.+|   .+.|.      +...|..|...-..+    .--.|..|...
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~-~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF-VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc-EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            577875  666666677888898755553 445554   34444      345566665543222    12478999999


Q ss_pred             CCCHHHHHHHHHHhhcCCCCCccCcchhhc-------cCCchHHHHHHHHhc
Q psy12195        199 FERLNKLKRHKFQAHNDSVHQIQCPYCITD-------FSEDKNLIQHIVSVH  243 (254)
Q Consensus       199 f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~-------f~~~~~l~~H~~~~h  243 (254)
                      |-+...|.+|.+..|..      |-.|++.       |.+-..|..|.+..|
T Consensus       230 FYdDDEL~~HcR~~HE~------ChICD~v~p~~~QYFK~Y~~Le~HF~~~h  275 (493)
T COG5236         230 FYDDDELRRHCRLRHEA------CHICDMVGPIRYQYFKSYEDLEAHFRNAH  275 (493)
T ss_pred             ecChHHHHHHHHhhhhh------hhhhhccCccchhhhhCHHHHHHHhhcCc
Confidence            99999999999977754      6666654       777888888875554

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=89.80  E-value=0.36  Score=34.24  Aligned_cols=33  Identities=18%  Similarity=0.362  Sum_probs=23.0

Q ss_pred             hCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhc
Q psy12195        185 HNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITD  228 (254)
Q Consensus       185 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~  228 (254)
                      .+...|.||.|+..|+..-.+.           ..|.||.||..
T Consensus       105 ~~~~~Y~Cp~c~~r~tf~eA~~-----------~~F~Cp~Cg~~  137 (158)
T TIGR00373       105 TNNMFFICPNMCVRFTFNEAME-----------LNFTCPRCGAM  137 (158)
T ss_pred             cCCCeEECCCCCcEeeHHHHHH-----------cCCcCCCCCCE
Confidence            4556788888888877666653           25888888754

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=89.77  E-value=0.19  Score=25.26  Aligned_cols=25  Identities=24%  Similarity=0.538  Sum_probs=15.9

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhh
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  227 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~  227 (254)
                      .|.|..||..+..              ...+-.||+|+.
T Consensus         2 ~~~C~~CG~i~~g--------------~~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVCPVCGYIHEG--------------EEAPEKCPICGA   26 (34)
T ss_pred             eEECCCCCCEeEC--------------CcCCCcCcCCCC
Confidence            4678888864422              234567888875

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.58  E-value=0.23  Score=32.60  Aligned_cols=14  Identities=43%  Similarity=0.978  Sum_probs=7.0

Q ss_pred             CccCcchhhccCCc
Q psy12195        219 QIQCPYCITDFSED  232 (254)
Q Consensus       219 ~~~C~~C~~~f~~~  232 (254)
                      |..||.||..|.-.
T Consensus        26 PivCP~CG~~~~~~   39 (108)
T PF09538_consen   26 PIVCPKCGTEFPPE   39 (108)
T ss_pred             CccCCCCCCccCcc
Confidence            44455555555443

The function of members of this family is unknown.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.41  E-value=0.95  Score=29.83  Aligned_cols=25  Identities=20%  Similarity=0.506  Sum_probs=23.1

Q ss_pred             ccC----CCCcccCCCHHHHHHHHHHhhc
Q psy12195        190 YQC----NECPESFERLNKLKRHKFQAHN  214 (254)
Q Consensus       190 ~~C----~~C~~~f~~~~~l~~H~~~~h~  214 (254)
                      |.|    +.|+....+..++.+|++..|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            899    9999999999999999998774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=89.02  E-value=0.42  Score=24.53  Aligned_cols=34  Identities=15%  Similarity=0.497  Sum_probs=18.1

Q ss_pred             eecccccccCCCHHHHHhhhcccccCcceeecCcCCcccC
Q psy12195         16 IRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVP   55 (254)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~   55 (254)
                      ..||.|+..|.-.++..      ..+...++|..|+..|.
T Consensus         3 i~CP~C~~~f~v~~~~l------~~~~~~vrC~~C~~~f~   36 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDKL------PAGGRKVRCPKCGHVFR   36 (37)
T ss_pred             EECCCCCceEEcCHHHc------ccCCcEEECCCCCcEee
Confidence            45777777776544321      11122466777765553

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=89.00  E-value=0.32  Score=25.04  Aligned_cols=34  Identities=21%  Similarity=0.536  Sum_probs=18.7

Q ss_pred             eecccccccCCCHHHHHhhhcccccCcceeecCcCCcccC
Q psy12195         16 IRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVP   55 (254)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~   55 (254)
                      +.||.|+..|.-..+...      .....+.|+.|+..|.
T Consensus         3 ~~CP~C~~~~~v~~~~~~------~~~~~v~C~~C~~~~~   36 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQLG------ANGGKVRCGKCGHVWY   36 (38)
T ss_pred             EECCCCCCEEEeCHHHcC------CCCCEEECCCCCCEEE
Confidence            567777777765544311      1112466777766553

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.82  E-value=0.076  Score=44.26  Aligned_cols=48  Identities=25%  Similarity=0.391  Sum_probs=37.4

Q ss_pred             eeeeecccccccCCCHHHHHhhhcccccCcceeecCcCC--cccCCCCccc
Q psy12195         13 VVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCN--VLVPRDEILP   61 (254)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~--~~~~~~~~l~   61 (254)
                      ...+.|+.|...|........|.+. +..+++..|...+  ..+.....+.
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   80 (467)
T COG5048          31 PRPDSCPNCTDSFSRLEHLTRHIRS-HTGEKPSQCSYSGCDKSFSRPLELS   80 (467)
T ss_pred             Cchhhcccccccccccchhhhhccc-ccccCCccccccccccccCCcchhh
Confidence            5677899999999999999999998 9998888887754  3444444444

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=88.78  E-value=0.44  Score=24.29  Aligned_cols=33  Identities=21%  Similarity=0.583  Sum_probs=16.8

Q ss_pred             eecccccccCCCHHHHHhhhcccccCcceeecCcCCccc
Q psy12195         16 IRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLV   54 (254)
Q Consensus        16 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~   54 (254)
                      ..|+.|+..|.-.++...      ..-..++|..|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~ip------~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEKIP------PKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHHCC------CCCcEEECCCCCCEe
Confidence            456666666665544311      111245666666544

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=88.52  E-value=0.27  Score=26.40  Aligned_cols=26  Identities=27%  Similarity=0.551  Sum_probs=13.3

Q ss_pred             CCccCcchhhccCC----chHHHHHHHHhc
Q psy12195        218 HQIQCPYCITDFSE----DKNLIQHIVSVH  243 (254)
Q Consensus       218 ~~~~C~~C~~~f~~----~~~l~~H~~~~h  243 (254)
                      ...+|..|++.+..    .++|..|++..|
T Consensus        15 ~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   15 KKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             S-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             CeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            34556666665544    366677765544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>smart00614 ZnF_BED BED zinc finger

Probab=88.40  E-value=0.35  Score=26.75  Aligned_cols=25  Identities=32%  Similarity=0.636  Sum_probs=15.5

Q ss_pred             ccCcchhhccCCc-----hHHHHHHHHhcC
Q psy12195        220 IQCPYCITDFSED-----KNLIQHIVSVHL  244 (254)
Q Consensus       220 ~~C~~C~~~f~~~-----~~l~~H~~~~h~  244 (254)
                      -.|..|++.++..     ++|.+|++..|.
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~h~   48 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRKHP   48 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhHCc
Confidence            3577777665443     577777755554

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>TIGR00622 ssl1 transcription factor ssl1

Probab=88.10  E-value=0.77  Score=30.17  Aligned_cols=89  Identities=25%  Similarity=0.398  Sum_probs=44.6

Q ss_pred             CcccccccccccCCHHHHHHHHHhcCC---cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHH
Q psy12195        133 LSIQCNMCSLVLDSKESLVTHISQTHT---LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHK  209 (254)
Q Consensus       133 ~~~~C~~C~~~f~~~~~l~~h~~~~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  209 (254)
                      .|..|+.||.+..++..|.+.-  .|-   .+|.         .- .+      -.......|--|...|........  
T Consensus        14 LP~~CpiCgLtLVss~HLARSy--HHLfPl~~f~---------ev-~~------~~~~~~~~C~~C~~~f~~~~~~~~--   73 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSY--HHLFPLKAFQ---------EI-PL------EEYNGSRFCFGCQGPFPKPPVSPF--   73 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhh--hccCCCcccc---------cc-cc------cccCCCCcccCcCCCCCCcccccc--
Confidence            4678888888887777666442  221   1121         00 00      001112236666666654321110  


Q ss_pred             HHhhcCCCCCccCcchhhccCCchHHHHHHHHhcC
Q psy12195        210 FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       210 ~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  244 (254)
                      . . ......|+|+.|...|-..-++-.|- ..|.
T Consensus        74 ~-~-~~~~~~y~C~~C~~~FC~dCD~fiHe-~Lh~  105 (112)
T TIGR00622        74 D-E-LKDSHRYVCAVCKNVFCVDCDVFVHE-SLHC  105 (112)
T ss_pred             c-c-cccccceeCCCCCCccccccchhhhh-hccC
Confidence            0 0 01123577888887777777777775 4443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=87.83  E-value=0.35  Score=22.64  Aligned_cols=8  Identities=38%  Similarity=1.070  Sum_probs=3.2

Q ss_pred             CCCCcccC
Q psy12195        192 CNECPESF  199 (254)
Q Consensus       192 C~~C~~~f  199 (254)
                      |+.||..|
T Consensus        17 Cp~CG~~F   24 (26)
T PF10571_consen   17 CPHCGYDF   24 (26)
T ss_pred             CCCCCCCC
Confidence            44444333

Several members are annotated as putative helicases.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=87.72  E-value=0.48  Score=34.32  Aligned_cols=32  Identities=22%  Similarity=0.456  Sum_probs=20.1

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhc
Q psy12195        186 NSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITD  228 (254)
Q Consensus       186 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~  228 (254)
                      ....|.||.|+..|+..-.+           ...|.||.||..
T Consensus       114 ~~~~Y~Cp~C~~rytf~eA~-----------~~~F~Cp~Cg~~  145 (178)
T PRK06266        114 NNMFFFCPNCHIRFTFDEAM-----------EYGFRCPQCGEM  145 (178)
T ss_pred             CCCEEECCCCCcEEeHHHHh-----------hcCCcCCCCCCC
Confidence            34567777777777655443           125778887754

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=87.18  E-value=0.92  Score=25.81  Aligned_cols=10  Identities=30%  Similarity=0.836  Sum_probs=5.6

Q ss_pred             Cccccccccc
Q psy12195         74 SIYECNQCKE   83 (254)
Q Consensus        74 ~~~~C~~C~~   83 (254)
                      .+|.|+.||.
T Consensus        49 ~~Y~Cp~CGF   58 (61)
T COG2888          49 NPYRCPKCGF   58 (61)
T ss_pred             CceECCCcCc
Confidence            4556666654

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.52  E-value=0.48  Score=31.08  Aligned_cols=15  Identities=20%  Similarity=0.519  Sum_probs=7.7

Q ss_pred             CcccCCCCcccCCCH
Q psy12195        188 KSYQCNECPESFERL  202 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~  202 (254)
                      .|..||.||..|.-.
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            455555555555433

The function of members of this family is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=86.12  E-value=0.4  Score=39.90  Aligned_cols=53  Identities=26%  Similarity=0.501  Sum_probs=36.7

Q ss_pred             eeecccccccCCCHHHHHhhhcc-cccCc--ceeecC--cCCcccCCCCccchhhhhc
Q psy12195         15 IIRCETCTRNYESLESLTTHLSF-KHSNQ--FLMKCT--NCNVLVPRDEILPHLSIQH   67 (254)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~~~-~h~~~--~~~~C~--~C~~~~~~~~~l~~~~~~h   67 (254)
                      ++.|..|...|.....+..|.+. .|..+  .++.|.  .|++.|.....+..+...|
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  346 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLH  346 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccc
Confidence            56677777777777777777772 26666  677777  6777777777766554445

>smart00531 TFIIE Transcription initiation factor IIE

Probab=86.08  E-value=0.83  Score=31.98  Aligned_cols=16  Identities=25%  Similarity=0.762  Sum_probs=9.7

Q ss_pred             CCCcccCCCCcccCCC
Q psy12195        186 NSKSYQCNECPESFER  201 (254)
Q Consensus       186 ~~~~~~C~~C~~~f~~  201 (254)
                      +...|.||.|+..|..
T Consensus        96 ~~~~Y~Cp~C~~~y~~  111 (147)
T smart00531       96 NNAYYKCPNCQSKYTF  111 (147)
T ss_pred             CCcEEECcCCCCEeeH
Confidence            3445677777766653

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=85.83  E-value=0.46  Score=33.72  Aligned_cols=24  Identities=29%  Similarity=0.648  Sum_probs=18.2

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchh
Q psy12195        188 KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCI  226 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~  226 (254)
                      +.|.|++||.              .+.+ +.|-+||+|+
T Consensus       133 ~~~vC~vCGy--------------~~~g-e~P~~CPiCg  156 (166)
T COG1592         133 KVWVCPVCGY--------------THEG-EAPEVCPICG  156 (166)
T ss_pred             CEEEcCCCCC--------------cccC-CCCCcCCCCC
Confidence            4689999985              3455 6788899998

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=84.87  E-value=0.58  Score=25.11  Aligned_cols=10  Identities=20%  Similarity=0.730  Sum_probs=4.0

Q ss_pred             cccCCCcccC
Q psy12195        162 FTCRRCPSTF  171 (254)
Q Consensus       162 ~~C~~C~~~f  171 (254)
                      |.|..||..|
T Consensus         3 Y~C~~Cg~~~   12 (44)
T smart00659        3 YICGECGREN   12 (44)
T ss_pred             EECCCCCCEe
Confidence            3344444433

present in RNA polymerase I, II and III

>TIGR00622 ssl1 transcription factor ssl1

Probab=84.76  E-value=1.7  Score=28.58  Aligned_cols=47  Identities=15%  Similarity=0.204  Sum_probs=27.3

Q ss_pred             cccccccccccHHHHHhHHhhhccCCCCcccccchhhccChHHHHHHHHh
Q psy12195         77 ECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYL  126 (254)
Q Consensus        77 ~C~~C~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  126 (254)
                      .|-.|...|........   ..-.....|.|+.|...|-..-++-.|...
T Consensus        57 ~C~~C~~~f~~~~~~~~---~~~~~~~~y~C~~C~~~FC~dCD~fiHe~L  103 (112)
T TIGR00622        57 FCFGCQGPFPKPPVSPF---DELKDSHRYVCAVCKNVFCVDCDVFVHESL  103 (112)
T ss_pred             cccCcCCCCCCcccccc---cccccccceeCCCCCCccccccchhhhhhc
Confidence            36777766654321100   001234467788888888777777777654

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.50  E-value=0.098  Score=39.15  Aligned_cols=45  Identities=22%  Similarity=0.356  Sum_probs=23.9

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHHh--hcC------CCCC-----ccCcchhhccCCc
Q psy12195        188 KSYQCNECPESFERLNKLKRHKFQA--HND------SVHQ-----IQCPYCITDFSED  232 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~~~--h~~------~~~~-----~~C~~C~~~f~~~  232 (254)
                      +.+.||+|++.|....-+....+..  ..+      +..|     ..||.||..|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            4567777777776653332222211  111      1222     4699999876644

>PHA00626 hypothetical protein

Probab=84.46  E-value=0.25  Score=27.59  Aligned_cols=12  Identities=25%  Similarity=0.260  Sum_probs=5.6

Q ss_pred             CccCcchhhccC
Q psy12195        219 QIQCPYCITDFS  230 (254)
Q Consensus       219 ~~~C~~C~~~f~  230 (254)
                      .|+|+.|+..|+
T Consensus        23 rYkCkdCGY~ft   34 (59)
T PHA00626         23 DYVCCDCGYNDS   34 (59)
T ss_pred             ceEcCCCCCeec
Confidence            344555544444

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=84.01  E-value=1.2  Score=20.79  Aligned_cols=19  Identities=26%  Similarity=0.363  Sum_probs=10.8

Q ss_pred             cCCCCcccCCCHHHHHHHHH
Q psy12195        191 QCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       191 ~C~~C~~~f~~~~~l~~H~~  210 (254)
                      .||+|++.+ ....+.+|+.
T Consensus         3 ~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        3 QCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHH
Confidence            466666666 4455555553

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=83.72  E-value=0.91  Score=24.56  Aligned_cols=12  Identities=33%  Similarity=0.808  Sum_probs=5.5

Q ss_pred             eeecccccccCC
Q psy12195         15 IIRCETCTRNYE   26 (254)
Q Consensus        15 ~~~C~~C~~~f~   26 (254)
                      +|+|+.||..|.
T Consensus         3 ~y~C~~CG~~~~   14 (46)
T PRK00398          3 EYKCARCGREVE   14 (46)
T ss_pred             EEECCCCCCEEE
Confidence            344444444443

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=83.72  E-value=0.35  Score=36.23  Aligned_cols=19  Identities=16%  Similarity=0.454  Sum_probs=12.1

Q ss_pred             eeeeecccccccCCCHHHH
Q psy12195         13 VVIIRCETCTRNYESLESL   31 (254)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l   31 (254)
                      ++.+.||+|+..|.++.-.
T Consensus         3 ~k~~~CPvC~~~F~~~~vr   21 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVR   21 (214)
T ss_pred             CCceECCCCCCeeeeeEEE
Confidence            3556777777777765433

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=82.75  E-value=0.63  Score=28.80  Aligned_cols=35  Identities=17%  Similarity=0.291  Sum_probs=22.8

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCch
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDK  233 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~  233 (254)
                      ..+|.||.|++.-        +.+ .   +...+.|..|+..|+-.+
T Consensus        33 ~~~~~Cp~C~~~~--------VkR-~---a~GIW~C~kCg~~fAGga   67 (89)
T COG1997          33 RAKHVCPFCGRTT--------VKR-I---ATGIWKCRKCGAKFAGGA   67 (89)
T ss_pred             hcCCcCCCCCCcc--------eee-e---ccCeEEcCCCCCeecccc
Confidence            4578888888641        111 1   244788999998887543

>smart00531 TFIIE Transcription initiation factor IIE

Probab=81.25  E-value=1.4  Score=30.84  Aligned_cols=17  Identities=29%  Similarity=0.692  Sum_probs=9.4

Q ss_pred             eeeeecccccccCCCHH
Q psy12195         13 VVIIRCETCTRNYESLE   29 (254)
Q Consensus        13 ~~~~~C~~C~~~f~~~~   29 (254)
                      ...|.||.|+..|....
T Consensus        97 ~~~Y~Cp~C~~~y~~~e  113 (147)
T smart00531       97 NAYYKCPNCQSKYTFLE  113 (147)
T ss_pred             CcEEECcCCCCEeeHHH
Confidence            44566666666665433

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=80.26  E-value=0.32  Score=34.21  Aligned_cols=13  Identities=23%  Similarity=0.478  Sum_probs=8.1

Q ss_pred             cccCCCcccCCCh
Q psy12195        162 FTCRRCPSTFLNS  174 (254)
Q Consensus       162 ~~C~~C~~~f~~~  174 (254)
                      ++|+.||..|...
T Consensus        29 ~~c~~c~~~f~~~   41 (154)
T PRK00464         29 RECLACGKRFTTF   41 (154)
T ss_pred             eeccccCCcceEe
Confidence            6666666666543

>KOG2186|consensus

Probab=80.06  E-value=1  Score=33.98  Aligned_cols=56  Identities=23%  Similarity=0.532  Sum_probs=41.1

Q ss_pred             ccccccccccCCHHHHHHHHHhcCCcccccCCCcccCCChHHHHHHHhHhhCCCcccC
Q psy12195        135 IQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQC  192 (254)
Q Consensus       135 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  192 (254)
                      |.|..||.+..- ..+..|+..-+...|.|--|+..|.. ..+..|..--++...|.=
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~kCITEaQKYg~   59 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTKCITEAQKYGK   59 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccCCeeEEeeccccccc-chhhhhhhhcchHHHhhh
Confidence            678888887654 45667877666678889999999887 677888776666555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	254
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		5e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 66/174 (37%), Gaps = 9/174 (5%)
Query: 76  YECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSI 135
           Y C +C  K+   +  L  +   H  +    C  C   F +K  L +H            
Sbjct: 22  YACPECG-KSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTH--TGEKPY 78
Query: 136 QCNMCSLVLDSKESLVTHISQTHTL--MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCN 193
           +C  C      + +L  H  +THT    + C  C  +F   A L  H +     K Y+C 
Sbjct: 79  KCPECGKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137
Query: 194 ECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE 247
           EC +SF R + L  H  Q  +      +CP C   FS    L  H    H GK+
Sbjct: 138 ECGKSFSREDNL--HTHQRTHTGEKPYKCPECGKSFSRRDALNVH-QRTHTGKK 188

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 162 FTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQ 221
           F C+ C  +F  S+TLS H+ +  +++ Y C  C + F + + +K+H F    +  H  +
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH--K 59
Query: 222 CPYCITDFSEDKNLIQH 238
           C  C   FS+  NLI H
Sbjct: 60  CQVCGKAFSQSSNLITH 76

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 162 FTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQ 221
           + C  C  +F  S+ L KH +     K Y+C EC +SF + + L++H  Q  +      +
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKH--QRTHTGEKPYK 62
Query: 222 CPYCITDFSEDKNLIQH 238
           CP C   FS   +L +H
Sbjct: 63  CPECGKSFSRSDHLSRH 79

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	254
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	7e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	9e-04

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.5 bits (96), Expect = 4e-05
 Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 127 EHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHN 186
           ++ +    I  ++    L     L     +    +          L+ ++    +     
Sbjct: 12  KYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKA 71

Query: 187 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG 245
              + C  C   F     LK+H         H   CP C  +F+   + + H+   H  
Sbjct: 72  ISQFVCPLCLMPFSSSVSLKQHIRYTE----HTKVCPVCKKEFTSTDSALDHVCKKHNI 126

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 17/58 (29%), Positives = 27/58 (46%)

Query: 188 KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG 245
           K Y+C  C   F +   +K H  Q H ++V +  CP+C T  +   +L  H+   H  
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 162 FTCRRCPSTFLNSATLSKHVKMEH--NSKSYQCNECPESFERLNKLKRHKFQAH 213
           + C  C + F  S T+  H+  +H  N   + C  C     R + L  H  + H
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 40.3 bits (93), Expect = 7e-05
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 136 QCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNEC 195
           QC +C+  L S     +H          C  C   F +     +H + +   K   C EC
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRNA-AVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLEC 75

Query: 196 PESFERLNKLKRHKFQAHN 214
             +F+    + RH+ + HN
Sbjct: 76  MRTFKSSFSIWRHQVEVHN 94

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 136 QCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCN 193
           QC +C       + L THI +THT    F C  C   F  S    +H +   +      +
Sbjct: 5   QCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRH-RDIQHILPILED 62

Query: 194 ECPESFERLNKLKRHK 209
           +  E   +   L+   
Sbjct: 63  KVEELLSKNYHLENEV 78

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 2e-04
 Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 6/86 (6%)

Query: 134 SIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRC------PSTFLNSATLSKHVKMEHNS 187
             +C  CS   D+   L  H+++T                  +     +L +    E   
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78

Query: 188 KSYQCNECPESFERLNKLKRHKFQAH 213
           K  +C  C  SFE L  L  H  +  
Sbjct: 79  KVLKCMYCGHSFESLQDLSVHMIKTK 104

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 162 FTCRRCPSTFLNSATLSKHVKM---EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVH 218
             C  C  T    A+L+ H +       +  + C  C + FE+ + +  H+ ++H   + 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 219 QIQCP 223
             Q  
Sbjct: 68  APQES 72

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 173 NSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSED 232
           +S +  K  K+    +S +C++C   F R + L R K            C  C  D  ++
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK---------TPMCEKCRKDSCQE 52

Query: 233 KNLIQHIVSVHLGKEGTAPA 252
             L +       GK+ + P+
Sbjct: 53  AALNKD-EGNESGKKTSGPS 71

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.0 bits (84), Expect = 9e-04
 Identities = 13/52 (25%), Positives = 25/52 (48%)

Query: 188 KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHI 239
            +Y+C  C   +  ++   RH   +H  +V    CP+C  +F+   N+  H+
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	254
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.98
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.93
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.86
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.86
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.85
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.84
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.84
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.83
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.78
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.78
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.76
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.75
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.73
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.71
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.69
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.69
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.69
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.69
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.68
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.68
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.67
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.65
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.64
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.63
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.62
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.62
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.61
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.61
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.6
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.6
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.6
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.59
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.59
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.58
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.57
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.55
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.55
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.54
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.54
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.54
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.54
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.52
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.52
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.51
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.5
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.5
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.48
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.48
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.46
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.42
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.39
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.39
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.38
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.34
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.32
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.29
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.28
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.28
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.28
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.26
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.26
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.26
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.26
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.26
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.25
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.24
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.23
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.21
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.19
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.18
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.17
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.17
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.15
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.15
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.13
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.11
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.1
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.06
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.05
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.03
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.02
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.02
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.0
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.99
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.99
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.98
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.97
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.97
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.93
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.91
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.9
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.87
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.8
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.79
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.75
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.74
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.74
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.72
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.72
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.68
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.64
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.64
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.6
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.6
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.58
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.56
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.53
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.52
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.52
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.5
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.49
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.48
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.46
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.44
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.42
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.42
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.41
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.76
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.39
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.39
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.35
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.35
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.69
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.33
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.33
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.31
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.29
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.29
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.28
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.27
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.26
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.25
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.25
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.25
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.24
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.23
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.22
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.22
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.21
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.2
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.19
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.19
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.47
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.17
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.45
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.4
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.08
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.25
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.96
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.83
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.72
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.61
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	97.26
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.89
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.8
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.77
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.46
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.44
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	96.24
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.16
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.44
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.37
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.8
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.43
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.91
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	91.89
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	91.44
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	91.02
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.64
1wvk_A	86	AT2G23090/F21P24.15; structural genomics, protein	89.7
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	89.18
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.11
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	86.91
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	84.86
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	83.87
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	81.74
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	81.05
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	80.9
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	80.38

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.2e-38  Score=232.61  Aligned_cols=181  Identities=24%  Similarity=0.461  Sum_probs=135.7

Q ss_pred             cchhhhhccCCCCCCcccccccccccccHHHHHhHHhhhccCCCCcccccchhhccChHHHHHHHHhhhccCCCcccccc
Q psy12195         60 LPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNM  139 (254)
Q Consensus        60 l~~~~~~h~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~  139 (254)
                      |..+...+   .++++|.|+.|+..|.....|..|+ ..|.++.+|.|+.|++.|.+...|..|+..+++ .. +|.|+.
T Consensus         9 l~~h~~~~---~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~-~~~C~~   82 (190)
T 2i13_A            9 SVAQAALE---PGEKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG-EK-PYKCPE   82 (190)
T ss_dssp             -------------------------CCSSHHHHHGG-GCC---CCEECTTTCCEESSHHHHHHHHHHHHC-CC-CEECTT
T ss_pred             chhhhhhc---CCCCCCcCCCCccccCCHHHHHHHH-HHcCCCCCccCCCcCchhCCHHHHHHHHHhcCC-CC-CccCcc
Confidence            33344445   6778899999999999999999998 668888899999999999999999999988543 33 689999


Q ss_pred             cccccCCHHHHHHHHHh-cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCC
Q psy12195        140 CSLVLDSKESLVTHISQ-THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVH  218 (254)
Q Consensus       140 C~~~f~~~~~l~~h~~~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  218 (254)
                      |++.|.+...|..|+.. ..+++|.|+.|++.|.....|..|+++|++++||.|++|++.|.+...|..|++ .|.+ .+
T Consensus        83 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~-~~  160 (190)
T 2i13_A           83 CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR-THTG-EK  160 (190)
T ss_dssp             TCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-HHHC-CC
T ss_pred             cCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHH-hcCC-CC
Confidence            99999999999999763 345899999999999999999999999999999999999999999999999998 4555 67


Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCCCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGT  249 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  249 (254)
                      +|.|++|++.|.+..+|..|+ +.|.|++||
T Consensus       161 ~~~C~~C~~~f~~~~~L~~H~-~~H~~~k~~  190 (190)
T 2i13_A          161 PYKCPECGKSFSRRDALNVHQ-RTHTGKKTS  190 (190)
T ss_dssp             CEECTTTCCEESSHHHHHHHH-TTC------
T ss_pred             CeECCCCCCccCCHHHHHHHH-HhcCCCCCC
Confidence            999999999999999999999 899999997

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=8.3e-36  Score=218.88  Aligned_cols=184  Identities=22%  Similarity=0.418  Sum_probs=133.5

Q ss_pred             HHHHHhhhcccccCcceeecCcCCcccCCCCccchhhhhccCCCCCCcccccccccccccHHHHHhHHhhhccCCCCccc
Q psy12195         28 LESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSC  107 (254)
Q Consensus        28 ~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~~~~~h~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~h~~~~~~~C  107 (254)
                      ...|..|+.. +.++++|.|+.|++.|.....|..|+..|   .+.++|.|+.|+..|.....|..|+ ..|.++.+|.|
T Consensus         6 ~~~l~~h~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~h---~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C   80 (190)
T 2i13_A            6 SSSSVAQAAL-EPGEKPYACPECGKSFSRSDHLAEHQRTH---TGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKC   80 (190)
T ss_dssp             --------------------------CCSSHHHHHGGGCC------CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEEC
T ss_pred             hccchhhhhh-cCCCCCCcCCCCccccCCHHHHHHHHHHc---CCCCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccC
Confidence            3456677776 77777888888888888888777666667   6778899999999999999999998 56888899999


Q ss_pred             ccchhhccChHHHHHHHHhhhccCCCcccccccccccCCHHHHHHHHHh-cCCcccccCCCcccCCChHHHHHHHhHhhC
Q psy12195        108 VPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQ-THTLMFTCRRCPSTFLNSATLSKHVKMEHN  186 (254)
Q Consensus       108 ~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  186 (254)
                      +.|++.|.+...|..|+..+++ .. +|.|+.|++.|.+.+.|..|+.. .++++|.|+.|++.|.....|..|+++|++
T Consensus        81 ~~C~~~f~~~~~l~~H~~~h~~-~~-~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  158 (190)
T 2i13_A           81 PECGKSFSQRANLRAHQRTHTG-EK-PYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG  158 (190)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHT-CC-CEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cccCCccCCHHHHHHHHHhcCC-CC-CCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            9999999999999999988543 33 68999999999999999999873 456899999999999999999999999999


Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCc
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQI  220 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  220 (254)
                      ++||.|++|+++|.+...|..|++ .|.+ +++|
T Consensus       159 ~~~~~C~~C~~~f~~~~~L~~H~~-~H~~-~k~~  190 (190)
T 2i13_A          159 EKPYKCPECGKSFSRRDALNVHQR-THTG-KKTS  190 (190)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHT-TC-------
T ss_pred             CCCeECCCCCCccCCHHHHHHHHH-hcCC-CCCC
Confidence            999999999999999999999998 5655 4554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.98  E-value=4.6e-32  Score=198.93  Aligned_cols=167  Identities=21%  Similarity=0.421  Sum_probs=148.5

Q ss_pred             CCCCcccc--cccccccccHHHHHhHHhhhccCCCCccc--ccchhhccChHHHHHHHHhhhccCCCccccc--cccccc
Q psy12195         71 TTPSIYEC--NQCKEKTNDMTTMLNHYSVKHYMDINMSC--VPCDVLFHNKATLYKHLYLEHKATSLSIQCN--MCSLVL  144 (254)
Q Consensus        71 ~~~~~~~C--~~C~~~~~~~~~l~~h~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~--~C~~~f  144 (254)
                      .+.++|.|  +.|+..|.....|..|+ ..|.++.+|.|  +.|++.|.+...|..|++.+ .... +|.|+  .|++.|
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~-~~~C~~~~C~~~f   84 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTH-TGEK-NFTCDSDGCDLRF   84 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTT-TTCC-CEECCSSSCCCEE
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHc-cCCC-ceeCCCCCCCCcc
Confidence            45678999  78999999999999998 66889999999  89999999999999999884 4444 79999  899999


Q ss_pred             CCHHHHHHHHHhcC---Cccccc--CCCcccCCChHHHHHHHhHhhCCCcccCCC--CcccCCCHHHHHHHHHHhhcCCC
Q psy12195        145 DSKESLVTHISQTH---TLMFTC--RRCPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSV  217 (254)
Q Consensus       145 ~~~~~l~~h~~~~~---~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~  217 (254)
                      .+...|..|+...|   +++|.|  +.|++.|.....|..|+++|++++||.|++  |+++|.+.+.|.+|++ .|.+  
T Consensus        85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~--  161 (190)
T 1tf6_A           85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAG--  161 (190)
T ss_dssp             SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHT-SSCS--
T ss_pred             CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHH-HhCC--
Confidence            99999999985455   478999  899999999999999999999999999988  9999999999999998 5555  


Q ss_pred             CCccCcc---hhhccCCchHHHHHHHHhcCCC
Q psy12195        218 HQIQCPY---CITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       218 ~~~~C~~---C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                        |.|+.   |++.|.+...|..|+ +.|.|+
T Consensus       162 --~~C~~~~~C~~~f~~~~~l~~H~-~~h~~e  190 (190)
T 1tf6_A          162 --YPCKKDDSCSFVGKTWTLYLKHV-AECHQD  190 (190)
T ss_dssp             --CCCCSTTTCCCCCSCHHHHHHHH-TTCC--
T ss_pred             --CcCCCCCcCCCccccHHHHHHHH-HhhcCC
Confidence              88999   999999999999999 777664

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1.5e-29  Score=185.48  Aligned_cols=166  Identities=22%  Similarity=0.447  Sum_probs=122.1

Q ss_pred             ceeeeec--ccccccCCCHHHHHhhhcccccCcceeecCcCCcccCCCCccchhhhhccCCCCCCcccc--ccccccccc
Q psy12195         12 KVVIIRC--ETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYEC--NQCKEKTND   87 (254)
Q Consensus        12 ~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~~~~~h~~~~~~~~~~C--~~C~~~~~~   87 (254)
                      +.++|.|  +.|++.|.+...|..|++. |.                               ++++|.|  +.|+..|..
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~-h~-------------------------------~~~~~~C~~~~C~~~f~~   56 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCK-HT-------------------------------GEKPFPCKEEGCEKGFTS   56 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHH-HH-------------------------------CCCSSCCSSTTCCCCCSS
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHh-cC-------------------------------CCCCccCCCCCCChhhCC
Confidence            3556666  4566666666666666655 43                               4456666  667777777


Q ss_pred             HHHHHhHHhhhccCCCCcccc--cchhhccChHHHHHHHHhhhccCCCcccc--cccccccCCHHHHHHHHHhc-CCccc
Q psy12195         88 MTTMLNHYSVKHYMDINMSCV--PCDVLFHNKATLYKHLYLEHKATSLSIQC--NMCSLVLDSKESLVTHISQT-HTLMF  162 (254)
Q Consensus        88 ~~~l~~h~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~h~~~~-~~~~~  162 (254)
                      ...|..|+ ..|.++.+|.|+  .|++.|.+...|..|+...|.....+|.|  +.|++.|.+.+.|..|+... ++++|
T Consensus        57 ~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~  135 (190)
T 1tf6_A           57 LHHLTRHS-LTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY  135 (190)
T ss_dssp             HHHHHHHH-TTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSS
T ss_pred             HHHHHHHH-HHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCc
Confidence            77777776 557777777777  78888888778888875545444447888  77888888888888887632 34788


Q ss_pred             ccCC--CcccCCChHHHHHHHhHhhCCCcccCCC---CcccCCCHHHHHHHHHHhh
Q psy12195        163 TCRR--CPSTFLNSATLSKHVKMEHNSKSYQCNE---CPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       163 ~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~~h  213 (254)
                      .|+.  |++.|.....|..|+++|++   |.|++   |++.|.+...|..|++.+|
T Consensus       136 ~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          136 ECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             BCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             cCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence            9977  99999999999999988887   88888   9999999999999987544

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=8.7e-28  Score=170.41  Aligned_cols=106  Identities=21%  Similarity=0.510  Sum_probs=91.6

Q ss_pred             ccccccccCCHHHHHHHHHh-cCCcccccCC--CcccCCChHHHHHHHhHhhCCCcccCCC--CcccCCCHHHHHHHHHH
Q psy12195        137 CNMCSLVLDSKESLVTHISQ-THTLMFTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQ  211 (254)
Q Consensus       137 C~~C~~~f~~~~~l~~h~~~-~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~  211 (254)
                      |..|++.|.+...|..|+.. ..+++|.|+.  |++.|.....|..|+++|++++||.|++  |+++|.+.+.|.+|+..
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            44556888888888888763 3458999985  9999999999999999999999999998  99999999999999965


Q ss_pred             hhcCCCCCccCcc--hhhccCCchHHHHHHHHhc
Q psy12195        212 AHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       212 ~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h  243 (254)
                      .|.+ .++|.|++  |++.|.+.++|..|++..|
T Consensus       122 ~H~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          122 THSN-EKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             TTCS-CCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             hcCC-CCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            7887 78999988  9999999999999994433

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=9.5e-26  Score=159.85  Aligned_cols=138  Identities=20%  Similarity=0.389  Sum_probs=111.2

Q ss_pred             CcccccccccccccHHHHHhHHhh--hccCCCCccccc-----chhhccChHHHHHHHHhhhccCCCcccccc--ccccc
Q psy12195         74 SIYECNQCKEKTNDMTTMLNHYSV--KHYMDINMSCVP-----CDVLFHNKATLYKHLYLEHKATSLSIQCNM--CSLVL  144 (254)
Q Consensus        74 ~~~~C~~C~~~~~~~~~l~~h~~~--~h~~~~~~~C~~-----C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~--C~~~f  144 (254)
                      .++.|+.|++.|.+...|..|+..  .|.++.+|.|+.     |++.|.+...|..|+..+++ .. +|.|+.  |++.|
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~-~~-~~~C~~~~C~~~f   79 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG-EK-PHKCTFEGCRKSY   79 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC-CC-CCCCCSTTCCCCC
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC-CC-CccCCCCCCCCcc
Confidence            356777777777777777777743  466667777654     34788888888888887443 33 688875  99999


Q ss_pred             CCHHHHHHHHHhc-CCcccccCC--CcccCCChHHHHHHH-hHhhCCCcccCCC--CcccCCCHHHHHHHHHHhh
Q psy12195        145 DSKESLVTHISQT-HTLMFTCRR--CPSTFLNSATLSKHV-KMEHNSKSYQCNE--CPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       145 ~~~~~l~~h~~~~-~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h  213 (254)
                      .+...|..|+... .+++|.|+.  |++.|.....|..|+ .+|++++||.|++  |+++|.+.+.|.+|++.+|
T Consensus        80 ~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           80 SRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             SSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             cCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            9999999997733 347899998  999999999999998 7899999999988  9999999999999998655

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=3.5e-25  Score=156.93  Aligned_cols=116  Identities=24%  Similarity=0.487  Sum_probs=95.7

Q ss_pred             cccccccccccCCHHHHHHHHHhcCC----------cccccCCCcccCCChHHHHHHHhHhhCCCcccCCC--CcccCCC
Q psy12195        134 SIQCNMCSLVLDSKESLVTHISQTHT----------LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFER  201 (254)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~h~~~~~~----------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  201 (254)
                      +|.|..|++.|.+...|..|+...|.          ..|.|+.|++.|.....|..|+++|+++++|.|++  |++.|..
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            34455555555555555555442122          23899999999999999999999999999999998  9999999


Q ss_pred             HHHHHHHHHHhhcCCCCCccCcc--hhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        202 LNKLKRHKFQAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       202 ~~~l~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      ...|.+|++ .|.+ .++|.|++  |++.|.+.+.|..|+ +.|.|++||.|+
T Consensus       105 ~~~L~~H~~-~h~~-~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~c~  154 (155)
T 2rpc_A          105 SENLKIHKR-THTG-EKPFKCEFEGCDRRFANSSDRKKHM-HVHTSDKSGPSS  154 (155)
T ss_dssp             HHHHHHHHT-TTCS-SCSBCCSSTTCCCCBSSHHHHHHSS-TTTTSCCCSCSC
T ss_pred             HHHHHHHHH-hhCC-CCCccCCCCCCCCccCCHHHHHHHH-HHhcCCCCCCCC
Confidence            999999998 6666 67999997  999999999999999 899999999996

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.92  E-value=2.6e-25  Score=151.66  Aligned_cols=115  Identities=23%  Similarity=0.500  Sum_probs=99.1

Q ss_pred             Cccccc--ccccccCCHHHHHHHHHhcCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCC--CcccCCCHHHHHHH
Q psy12195        133 LSIQCN--MCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRH  208 (254)
Q Consensus       133 ~~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H  208 (254)
                      .+|.|+  .|++.|.+...|..|+...++++|.|+.|++.|.....|..|+.+|+++++|.|++  |++.|.+...|.+|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   83 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH   83 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHH
Confidence            478998  89999999999999988666689999999999999999999999999999999986  99999999999999


Q ss_pred             HHHhhcCCCCCccCc--chhhccCCchHHHHHHHHhcCCCCCCC
Q psy12195        209 KFQAHNDSVHQIQCP--YCITDFSEDKNLIQHIVSVHLGKEGTA  250 (254)
Q Consensus       209 ~~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~  250 (254)
                      ++ .|.+ .++|.|+  .|++.|.+.++|..|+ +.|.++++++
T Consensus        84 ~~-~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~-~~H~~~k~~q  124 (124)
T 1ubd_C           84 VR-IHTG-DRPYVCPFDGCNKKFAQSTNLKSHI-LTHAKAKNNQ  124 (124)
T ss_dssp             HH-HHHC-CCCCCCCSTTCCCCCSSTTTTHHHH-HHHC------
T ss_pred             HH-HhCC-CCceECCCCCCCCccCCHHHHHHHH-HHHcccccCC
Confidence            98 4555 5799996  4999999999999999 7899999874

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=1.2e-24  Score=148.29  Aligned_cols=112  Identities=24%  Similarity=0.545  Sum_probs=85.7

Q ss_pred             cccccccccccCCHHHHHHHHHhc-CCcccccCCCcccCCChHHHHHHHhH---hhCCCcccCCCCcccCCCHHHHHHHH
Q psy12195        134 SIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKM---EHNSKSYQCNECPESFERLNKLKRHK  209 (254)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~~H~  209 (254)
                      +|.|+.|++.|.+...|..|+... .+++|.|+.|++.|.....|..|+..   +.++++|.|++|++.|.+...|.+|+
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   86 (124)
T 2dlq_A            7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM   86 (124)
T ss_dssp             SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHH
Confidence            567777777777777777776532 23677788888888888888888775   46778888888888888888888888


Q ss_pred             HHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        210 FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       210 ~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      + .|.+ +++|.|++|++.|.+.+.|..|++..|.++.
T Consensus        87 ~-~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           87 V-SHTG-EMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             H-HHSS-SCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             H-HcCC-CCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            7 4555 5688888888888888888888877887765

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=8.8e-24  Score=143.99  Aligned_cols=113  Identities=24%  Similarity=0.470  Sum_probs=89.2

Q ss_pred             CCCCcccccchhhccChHHHHHHHHhhhccCCCcccccccccccCCHHHHHHHHHh----cCCcccccCCCcccCCChHH
Q psy12195        101 MDINMSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQ----THTLMFTCRRCPSTFLNSAT  176 (254)
Q Consensus       101 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~----~~~~~~~C~~C~~~f~~~~~  176 (254)
                      ++.+|.|+.|++.|.+...|..|++.++ ... +|.|+.|++.|.+...|..|+..    ..+++|.|+.|++.|.....
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-~~~-~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHT-GEK-PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHS-SCC-SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCC-CCC-CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            4556666666666666666666666532 223 56777777777777777777652    34578999999999999999


Q ss_pred             HHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        177 LSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       177 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      |..|+++|++++||.|++|++.|.+...|.+|++..|.+
T Consensus        82 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           82 LRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            999999999999999999999999999999999878877

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=1.6e-24  Score=148.41  Aligned_cols=101  Identities=20%  Similarity=0.321  Sum_probs=84.9

Q ss_pred             CcccccccccccCCHHHHHHHHHh-cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        133 LSIQCNMCSLVLDSKESLVTHISQ-THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       133 ~~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      .+|.|++|+++|...+.|..|+.. .+++||.|+.|++.|.....|..|+++|++++||.|++||++|.+.+.|..|++.
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~  100 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS  100 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHH
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHH
Confidence            378999999999999999999763 3468899999999999999999999999999999999999999999999999987


Q ss_pred             hhcCC----CCCccCcchhhccCCch
Q psy12195        212 AHNDS----VHQIQCPYCITDFSEDK  233 (254)
Q Consensus       212 ~h~~~----~~~~~C~~C~~~f~~~~  233 (254)
                      +|++.    .++|+|..|++.|....
T Consensus       101 hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A          101 VHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             HTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             hcCCCCCCCCCCeecCCCCchhhhcc
Confidence            77542    35688999988887543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=2.2e-23  Score=140.94  Aligned_cols=107  Identities=26%  Similarity=0.580  Sum_probs=89.6

Q ss_pred             cccccc--cccccCCHHHHHHHHHh-cCCcccccC--CCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHH
Q psy12195        134 SIQCNM--CSLVLDSKESLVTHISQ-THTLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRH  208 (254)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~h~~~-~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  208 (254)
                      +|.|.+  |++.|.+.+.|..|+.. ..+++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.+...|.+|
T Consensus         6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   85 (119)
T 2jp9_A            6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTH   85 (119)
T ss_dssp             CBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHH
T ss_pred             eeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHH
Confidence            678876  88888888888888663 345788998  7999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCCCccC--cchhhccCCchHHHHHHHHhc
Q psy12195        209 KFQAHNDSVHQIQC--PYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       209 ~~~~h~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      ++ .|.+ .++|.|  +.|++.|.+.+.|..|+ ++|
T Consensus        86 ~~-~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~-~~H  119 (119)
T 2jp9_A           86 TR-THTG-EKPFSCRWPSCQKKFARSDELVRHH-NMH  119 (119)
T ss_dssp             HH-HHHT-CCCEECCSTTCCCEESSHHHHHHHH-HTC
T ss_pred             HH-HhcC-CCCeeCCCCCCccccCCHHHHHHHH-hcC
Confidence            98 4555 568999  78999999999999998 544

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=1.9e-23  Score=143.11  Aligned_cols=80  Identities=21%  Similarity=0.497  Sum_probs=49.5

Q ss_pred             CCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHH
Q psy12195        158 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQ  237 (254)
Q Consensus       158 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~  237 (254)
                      ++++|.|++|++.|.....|..|+++|++++||.|++|+++|.+.+.|..|++ .|.+ +++|.|++|++.|.+.++|..
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~   96 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEI-HHTG-ERRYQCLACGKSFINYQFMSS   96 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHH-HHHT-CCCEEESSSCCEESSHHHHHH
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhcc-ccCC-CccccCCCCCCCcCCHHHHHH
Confidence            34566666666666666666666666666666666666666666666666665 4444 456666666666666666666


Q ss_pred             HH
Q psy12195        238 HI  239 (254)
Q Consensus       238 H~  239 (254)
                      |+
T Consensus        97 H~   98 (133)
T 2lt7_A           97 HI   98 (133)
T ss_dssp             HH
T ss_pred             Hh
Confidence            66

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=9.4e-23  Score=144.35  Aligned_cols=119  Identities=24%  Similarity=0.389  Sum_probs=83.3

Q ss_pred             CCcccccchhhccChHHHHHHHHhhhccCC-------CcccccccccccCCHHHHHHHHHh-cCCcccccCC--CcccCC
Q psy12195        103 INMSCVPCDVLFHNKATLYKHLYLEHKATS-------LSIQCNMCSLVLDSKESLVTHISQ-THTLMFTCRR--CPSTFL  172 (254)
Q Consensus       103 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-------~~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~~C~~--C~~~f~  172 (254)
                      ..|.|+.|++.|.+...|..|+..+|....       ..|.|+.|++.|.+...|..|+.. ..+++|.|+.  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            344444444444444444444443232221       126788888888888888888653 3457888887  888888


Q ss_pred             ChHHHHHHHhHhhCCCcccCCC--CcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        173 NSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       173 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      ....|..|+++|++++||.|++  |++.|.+...|.+|++ .|.+ +++|.|+
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH-VHTS-DKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST-TTTS-CCCSCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH-HhcC-CCCCCCC
Confidence            8888888888888888899986  9999998899999987 5666 6788874

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=3.8e-22  Score=134.86  Aligned_cols=108  Identities=23%  Similarity=0.487  Sum_probs=88.5

Q ss_pred             CCCCccccc--chhhccChHHHHHHHHhhhccCCCccccc--ccccccCCHHHHHHHHHh-cCCcccccCCCcccCCChH
Q psy12195        101 MDINMSCVP--CDVLFHNKATLYKHLYLEHKATSLSIQCN--MCSLVLDSKESLVTHISQ-THTLMFTCRRCPSTFLNSA  175 (254)
Q Consensus       101 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~-~~~~~~~C~~C~~~f~~~~  175 (254)
                      ++++|.|+.  |++.|.+...|..|+..+. ... +|.|+  .|++.|.+...|..|+.. ..+++|.|+.|++.|....
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~~~-~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   80 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHT-GEK-PYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD   80 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHH-TTC-CEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhC-CCC-CccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH
Confidence            456777775  7777777777777777633 333 57787  688888888888888663 3457899999999999999


Q ss_pred             HHHHHHhHhhCCCcccC--CCCcccCCCHHHHHHHHH
Q psy12195        176 TLSKHVKMEHNSKSYQC--NECPESFERLNKLKRHKF  210 (254)
Q Consensus       176 ~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~  210 (254)
                      .|..|+++|+++++|.|  ++|++.|.+.+.|.+|++
T Consensus        81 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           81 HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence            99999999999999999  899999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=6.7e-22  Score=134.63  Aligned_cols=110  Identities=23%  Similarity=0.472  Sum_probs=89.4

Q ss_pred             CCCcccc--cchhhccChHHHHHHHHhhhccCCCcccccccccccCCHHHHHHHHHhc-CCcccccCC--CcccCCChHH
Q psy12195        102 DINMSCV--PCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRR--CPSTFLNSAT  176 (254)
Q Consensus       102 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~--C~~~f~~~~~  176 (254)
                      +.+|.|+  .|++.|.+...|..|+..+   ...+|.|+.|++.|.+.+.|..|+... .+++|.|+.  |++.|.....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h---~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH---GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG---SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc---CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHH
Confidence            4567787  7888888888888888763   233788888888888888888887633 347899986  9999999999


Q ss_pred             HHHHHhHhhCCCcccCC--CCcccCCCHHHHHHHHHHhhcC
Q psy12195        177 LSKHVKMEHNSKSYQCN--ECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       177 l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      |..|+++|+++++|.|+  .|++.|.+.+.|.+|++. |.+
T Consensus        80 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-H~~  119 (124)
T 1ubd_C           80 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT-HAK  119 (124)
T ss_dssp             HHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHH-HC-
T ss_pred             HHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHH-Hcc
Confidence            99999999999999996  499999999999999984 554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.86  E-value=1.6e-21  Score=129.04  Aligned_cols=92  Identities=24%  Similarity=0.590  Sum_probs=85.5

Q ss_pred             CCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHH
Q psy12195        158 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQ  237 (254)
Q Consensus       158 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~  237 (254)
                      .+++|.|+.|++.|.....|..|+++|.++++|.|++|++.|.....|.+|++ .|.+ .++|+|++|++.|.+...|..
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY-IHSK-EKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGG-GSCC-CCTTSCSSSCCCCSSHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHH-HhCC-CCCeECCCcCCcccCHHHHHH
Confidence            34789999999999999999999999999999999999999999999999998 5666 679999999999999999999


Q ss_pred             HHHHhcCCCCCCCCC
Q psy12195        238 HIVSVHLGKEGTAPA  252 (254)
Q Consensus       238 H~~~~h~~~~~~~c~  252 (254)
                      |+ +.|.+++||..+
T Consensus        92 H~-~~H~~~~~~~~~  105 (106)
T 2ee8_A           92 HK-TLHMQTSSPTAA  105 (106)
T ss_dssp             HH-HHTTSCCCCCCC
T ss_pred             HH-HHhCCCCCCcCC
Confidence            99 899999999763

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=1.2e-21  Score=126.87  Aligned_cols=91  Identities=24%  Similarity=0.430  Sum_probs=83.2

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHH
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLI  236 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~  236 (254)
                      .++++|.|+.|++.|.....|..|+++|+++++|.|++|++.|.+...|.+|++.++....++|+|++|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            45689999999999999999999999999999999999999999999999999865544348999999999999999999


Q ss_pred             HHHHHhcCCCC
Q psy12195        237 QHIVSVHLGKE  247 (254)
Q Consensus       237 ~H~~~~h~~~~  247 (254)
                      .|++..|.++.
T Consensus        83 ~H~~~~H~~~~   93 (95)
T 2yt9_A           83 GHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHTSCCCS
T ss_pred             HHHHHhcCCCC
Confidence            99988998875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=3.8e-21  Score=124.80  Aligned_cols=92  Identities=22%  Similarity=0.464  Sum_probs=83.7

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHH
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLI  236 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~  236 (254)
                      ..+++|.|+.|++.|.....|..|+++|.++++|.|++|++.|.....|.+|++ .|.+ .++|.|++|++.|.+..+|.
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSD-ERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHH-HSCC-CCCEECSSSSCEESSHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHH-HhCC-CCCccCCCCCCccCCHHHHH
Confidence            446899999999999999999999999999999999999999999999999998 5666 67999999999999999999


Q ss_pred             HHHHHhcCCCCCCCC
Q psy12195        237 QHIVSVHLGKEGTAP  251 (254)
Q Consensus       237 ~H~~~~h~~~~~~~c  251 (254)
                      .|+ +.|.++++...
T Consensus        82 ~H~-~~h~~~~~p~~   95 (96)
T 2dmd_A           82 VHL-RSHTGDSGPSS   95 (96)
T ss_dssp             HHH-TTCCSCCCCCC
T ss_pred             HHH-HHhcCCCCCCC
Confidence            999 78888877654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=3.6e-21  Score=127.47  Aligned_cols=91  Identities=16%  Similarity=0.367  Sum_probs=83.3

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHH
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLI  236 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~  236 (254)
                      ..+++|.|+.|++.|.....|..|+++|.  ++|.|++|++.|.....|.+|+.  |.+ +++|+|++|++.|.+..+|.
T Consensus        12 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A           12 ENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHH
Confidence            44589999999999999999999999984  79999999999999999999984  766 78999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCC
Q psy12195        237 QHIVSVHLGKEGTAPA  252 (254)
Q Consensus       237 ~H~~~~h~~~~~~~c~  252 (254)
                      .|++..|.+++||.++
T Consensus        87 ~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           87 RHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHTSCCCCCCCCC
T ss_pred             HHHHHHcCCCCCCCCC
Confidence            9997799999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.84  E-value=2.4e-21  Score=124.21  Aligned_cols=87  Identities=24%  Similarity=0.594  Sum_probs=77.7

Q ss_pred             CcccccC--CCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHH
Q psy12195        159 TLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLI  236 (254)
Q Consensus       159 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~  236 (254)
                      +++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|.+...|..|++ .|.+ .++|.|++|++.|.+.++|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTG-EKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH-HHHC-CCCEECTTTCCEESSHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHH-HcCC-CCCccCCCCCchhCCHHHHH
Confidence            5789998  699999999999999999999999999999999999999999998 5555 67899999999999999999


Q ss_pred             HHHHHhcCCCCC
Q psy12195        237 QHIVSVHLGKEG  248 (254)
Q Consensus       237 ~H~~~~h~~~~~  248 (254)
                      .|+ +.|.|+++
T Consensus        80 ~H~-~~H~~~k~   90 (90)
T 1a1h_A           80 RHT-KIHLRQKD   90 (90)
T ss_dssp             HHH-GGGGC---
T ss_pred             HHH-HHhcccCC
Confidence            999 88998874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.83  E-value=6.5e-21  Score=119.96  Aligned_cols=82  Identities=33%  Similarity=0.719  Sum_probs=74.0

Q ss_pred             ccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHH
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIV  240 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~  240 (254)
                      ||.|+.|++.|.....|..|+++|.++++|.|++|++.|.+...|.+|++ .|.+ .++|.|+.|++.|.+.++|..|+ 
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~~H~-   77 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTG-EKPHKCQVCGKAFSQSSNLITHS-   77 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHH-HHHT-CCCEECTTTSCEESSHHHHHHHH-
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHH-HhcC-CCCCcCCCcchhhCChHHHHHHH-
Confidence            68899999999999999999999999999999999999999999999998 4555 57899999999999999999999 


Q ss_pred             HhcCC
Q psy12195        241 SVHLG  245 (254)
Q Consensus       241 ~~h~~  245 (254)
                      +.|+|
T Consensus        78 ~~H~g   82 (82)
T 2kmk_A           78 RKHTG   82 (82)
T ss_dssp             HHHC-
T ss_pred             HhhCC
Confidence            66664

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.79  E-value=2.1e-20  Score=119.17  Aligned_cols=83  Identities=24%  Similarity=0.416  Sum_probs=77.8

Q ss_pred             CcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHH
Q psy12195        159 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQH  238 (254)
Q Consensus       159 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H  238 (254)
                      ++||.|+.|++.|.....|..|+++|++++||.|++|+++|.....|.+|++.+|.   .+|.|+.|++.|.+..+|..|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHH
Confidence            47899999999999999999999999999999999999999999999999997763   589999999999999999999


Q ss_pred             HHHhcC
Q psy12195        239 IVSVHL  244 (254)
Q Consensus       239 ~~~~h~  244 (254)
                      ++..|.
T Consensus        78 ~~~~h~   83 (88)
T 1llm_C           78 VARLKK   83 (88)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988774

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.5e-19  Score=118.53  Aligned_cols=87  Identities=22%  Similarity=0.377  Sum_probs=70.1

Q ss_pred             cccccccccccCCHHHHHHHHHhcCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhh
Q psy12195        134 SIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  213 (254)
                      +|.|+.|++.|.....|..|+. .|+++|.|+.|++.|.....|..|+. |++++||.|++|++.|.....|.+|++..|
T Consensus        16 ~~~C~~C~~~f~~~~~l~~H~~-~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   93 (107)
T 1wjp_A           16 VYQCRLCNAKLSSLLEQGSHER-LCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVH   93 (107)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTS
T ss_pred             CeECCCCCCccCCHHHHHHHHH-HCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHc
Confidence            6777777777777777777776 45678888888888888888888885 888888888888888888888888887677


Q ss_pred             cCCCCCccCc
Q psy12195        214 NDSVHQIQCP  223 (254)
Q Consensus       214 ~~~~~~~~C~  223 (254)
                      .+ +++|.|+
T Consensus        94 ~~-~~~~~~~  102 (107)
T 1wjp_A           94 NQ-NNMAPTS  102 (107)
T ss_dssp             CC-CCCCCCC
T ss_pred             CC-CCCCCCC
Confidence            77 6777664

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.78  E-value=1.5e-19  Score=105.26  Aligned_cols=58  Identities=28%  Similarity=0.590  Sum_probs=33.6

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      |+||.|++||++|...+.|.+|++ .|++ +++|+|++|++.|.+.++|..|+ ++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~-~Ht~-ekp~~C~~C~k~F~~~~~L~~H~-~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRR-AHLG-YRPRSCPECGKCFRDQSEVNRHL-KVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHH-HHHT-CCCEECTTTCCEESSHHHHHHHG-GGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHH-HhCC-CcCeECCCCCCCcCCHHHHHHHh-CccCCCC
Confidence            456666666666666666666655 4444 45566666666666666666665 5555553

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=3.8e-19  Score=118.24  Aligned_cols=84  Identities=20%  Similarity=0.531  Sum_probs=69.0

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHH
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLI  236 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~  236 (254)
                      .++++|.| .|++.|.....|..|+++|.++++|.|++|++.|.....|.+|++ .|.+ .++|+|++|++.|.....|.
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTG-IKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT-TTCC-CCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHH-HcCC-CCCeeCCCCcchhcCHHHHH
Confidence            44578888 888888888888888888888888888888888888888888887 5555 56888888888888888888


Q ss_pred             HHHHHhc
Q psy12195        237 QHIVSVH  243 (254)
Q Consensus       237 ~H~~~~h  243 (254)
                      .|++..|
T Consensus        83 ~H~~~~~   89 (110)
T 2csh_A           83 RHVTSCT   89 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHcc
Confidence            8885544

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=5e-18  Score=112.04  Aligned_cols=88  Identities=22%  Similarity=0.442  Sum_probs=71.0

Q ss_pred             CcccccccccccCCHHHHHHHHHhc-CCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        133 LSIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       133 ~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      .+|.|..|++.|.+...|..|+... .+++|.|+.|++.|.....|..|+++|+++++|.|++|++.|.+...|.+|++ 
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-   94 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT-   94 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH-
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH-
Confidence            3678888888888888888887633 34788999999999999999999999999999999999999999999999987 


Q ss_pred             hhcCCCCCccC
Q psy12195        212 AHNDSVHQIQC  222 (254)
Q Consensus       212 ~h~~~~~~~~C  222 (254)
                      .|.+ +++|.+
T Consensus        95 ~H~~-~~~~~~  104 (106)
T 2ee8_A           95 LHMQ-TSSPTA  104 (106)
T ss_dssp             HTTS-CCCCCC
T ss_pred             HhCC-CCCCcC
Confidence            5555 456543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.76  E-value=8.5e-19  Score=102.01  Aligned_cols=56  Identities=25%  Similarity=0.540  Sum_probs=53.7

Q ss_pred             CcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        159 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       159 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      |+||.|++||+.|.....|..|+++|++++||.|++||++|.+.+.|.+|++ .|.+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~-~Htg   57 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK-VHQN   57 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG-GGSC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC-ccCC
Confidence            6899999999999999999999999999999999999999999999999998 6766

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=2.1e-18  Score=108.34  Aligned_cols=79  Identities=23%  Similarity=0.533  Sum_probs=71.2

Q ss_pred             cccccccccccCCHHHHHHHHHh-cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHh
Q psy12195        134 SIQCNMCSLVLDSKESLVTHISQ-THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQA  212 (254)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  212 (254)
                      ||.|+.|++.|.+...|..|+.. ..+++|.|+.|++.|.....|..|+++|+++++|.|++|++.|.+.+.|.+|++.+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            47899999999999999999763 34589999999999999999999999999999999999999999999999999854

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.75  E-value=3.8e-18  Score=111.38  Aligned_cols=84  Identities=27%  Similarity=0.584  Sum_probs=75.1

Q ss_pred             CcccccCC--CcccCCChHHHHHHHhHhhCCCcccCC--CCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchH
Q psy12195        159 TLMFTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCN--ECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKN  234 (254)
Q Consensus       159 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~  234 (254)
                      .++|.|+.  |++.|.....|..|+++|.++++|.|+  .|++.|.....|.+|++ .|.+ .++|+|++|++.|.+..+
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTG-AKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHH-HHTS-CCSCBCSSSCCBCSSHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHH-HhCC-CCCeECCCCcCccCCHHH
Confidence            47899996  999999999999999999999999996  59999999999999998 5666 678999999999999999


Q ss_pred             HHHHHHHhcCC
Q psy12195        235 LIQHIVSVHLG  245 (254)
Q Consensus       235 l~~H~~~~h~~  245 (254)
                      |..|+ +.|.|
T Consensus        91 l~~H~-~~H~~  100 (100)
T 2ebt_A           91 LALHM-KRHQN  100 (100)
T ss_dssp             HHHHH-HHHCC
T ss_pred             HHHHH-HHhCC
Confidence            99998 67754

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=2e-18  Score=110.16  Aligned_cols=82  Identities=32%  Similarity=0.615  Sum_probs=70.7

Q ss_pred             CcccccCC--CcccCCChHHHHHHHhHhhCCCcccCC--CCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchH
Q psy12195        159 TLMFTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCN--ECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKN  234 (254)
Q Consensus       159 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~  234 (254)
                      +.+|.|+.  |++.|.....|..|+++|.++++|.|+  .|++.|.+...|.+|++ .|.+ .++|.|+.|++.|.+.++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~   80 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTG-HRPFQCQKCDRAFSRSDH   80 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHH-HHHC-CCCEECSSSSCEESSHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHH-HcCC-CCCccCCCCCcccCCHHH
Confidence            45788988  999999999999999999999999997  59999999999999987 5555 568999999999999999


Q ss_pred             HHHHHHHhc
Q psy12195        235 LIQHIVSVH  243 (254)
Q Consensus       235 l~~H~~~~h  243 (254)
                      |..|+ +.|
T Consensus        81 l~~H~-~~H   88 (89)
T 2wbs_A           81 LALHM-KRH   88 (89)
T ss_dssp             HHHHG-GGG
T ss_pred             HHHHH-Hhh
Confidence            99998 666

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=5.8e-18  Score=109.62  Aligned_cols=83  Identities=22%  Similarity=0.526  Sum_probs=72.0

Q ss_pred             CcccccccccccCCHHHHHHHHHhcC-CcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        133 LSIQCNMCSLVLDSKESLVTHISQTH-TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       133 ~~~~C~~C~~~f~~~~~l~~h~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      .+|.|+.|++.|.+...|..|+.... +++|.|+.|++.|.....|..|+++|+++++|.|++|++.|.+...|..|++.
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   86 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRS   86 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTT
T ss_pred             cCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHH
Confidence            37888889999988888888877333 37899999999999999999999999999999999999999999999999985


Q ss_pred             hhcC
Q psy12195        212 AHND  215 (254)
Q Consensus       212 ~h~~  215 (254)
                      ++.+
T Consensus        87 h~~~   90 (96)
T 2dmd_A           87 HTGD   90 (96)
T ss_dssp             CCSC
T ss_pred             hcCC
Confidence            4433

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.1e-17  Score=108.01  Aligned_cols=83  Identities=25%  Similarity=0.517  Sum_probs=73.8

Q ss_pred             CcccccccccccCCHHHHHHHHHhc-CCcccccCCCcccCCChHHHHHHHhHhhCC--CcccCCCCcccCCCHHHHHHHH
Q psy12195        133 LSIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKMEHNS--KSYQCNECPESFERLNKLKRHK  209 (254)
Q Consensus       133 ~~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H~  209 (254)
                      .+|.|+.|++.|.+...|..|+... .+++|.|+.|++.|.....|..|+++|+++  ++|.|++|++.|.+...|..|+
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~   85 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI   85 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHH
T ss_pred             CCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHH
Confidence            3788999999999888899887733 347899999999999999999999999987  9999999999999999999999


Q ss_pred             HHhhcC
Q psy12195        210 FQAHND  215 (254)
Q Consensus       210 ~~~h~~  215 (254)
                      +..|.+
T Consensus        86 ~~~H~~   91 (95)
T 2yt9_A           86 KQVHSG   91 (95)
T ss_dssp             HHTSCC
T ss_pred             HHhcCC
Confidence            877876

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.73  E-value=5.4e-18  Score=107.17  Aligned_cols=77  Identities=22%  Similarity=0.448  Sum_probs=70.8

Q ss_pred             cccc--CCCcccCCChHHHHHHHhHhhCCCcccCCC--CcccCCCHHHHHHHHHHhhcCCCCCccCcc---hhhccCCch
Q psy12195        161 MFTC--RRCPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCPY---CITDFSEDK  233 (254)
Q Consensus       161 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~---C~~~f~~~~  233 (254)
                      ||.|  +.|++.|.....|..|+++|++++||.|++  |+++|.+...|.+|++.++ +    |.|+.   |++.|.+.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~----~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA-G----YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH-S----EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhC-C----CCCCCCCCCCCccCCHH
Confidence            6889  999999999999999999999999999988  9999999999999998544 3    89999   999999999


Q ss_pred             HHHHHHHHh
Q psy12195        234 NLIQHIVSV  242 (254)
Q Consensus       234 ~l~~H~~~~  242 (254)
                      +|..|++..
T Consensus        76 ~l~~H~~~h   84 (85)
T 2j7j_A           76 LYLKHVAEC   84 (85)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhc
Confidence            999999544

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=8.8e-19  Score=108.66  Aligned_cols=74  Identities=23%  Similarity=0.439  Sum_probs=67.3

Q ss_pred             HHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCC
Q psy12195        177 LSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  250 (254)
Q Consensus       177 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  250 (254)
                      +.+|+++|++++||.|++|++.|.....|.+|++..|.+..++|+|+.|++.|.....|..|++..|.++.|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~s   76 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPSS   76 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34688999999999999999999999999999987787745899999999999999999999988999998863

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=3.3e-19  Score=119.55  Aligned_cols=78  Identities=19%  Similarity=0.411  Sum_probs=35.9

Q ss_pred             cccccCCCcccCCChHHHHHHHhH--hhCCCccc-CCCCcccC--CCHHHHHHHHHHhhcCCCCCccCcchhhccCCchH
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKM--EHNSKSYQ-CNECPESF--ERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKN  234 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~  234 (254)
                      ++|.|+.|++.|.....|..|+++  |.+++++. |++|++.|  .....|.+|++ .|.+ +++|+|++|++.|.+.++
T Consensus        18 ~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~-~H~~-~~~~~C~~C~k~f~~~~~   95 (115)
T 2dmi_A           18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG-KEDA-QKVLKCMYCGHSFESLQD   95 (115)
T ss_dssp             CSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCC-SCCC-CSSCBCSSSCCBCSSHHH
T ss_pred             CCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhh-ccCC-CcceECCCCCCccCCHHH
Confidence            444444444444444444444444  33333332 44444444  44444444443 2333 344445555555555555


Q ss_pred             HHHHH
Q psy12195        235 LIQHI  239 (254)
Q Consensus       235 l~~H~  239 (254)
                      |..|+
T Consensus        96 L~~H~  100 (115)
T 2dmi_A           96 LSVHM  100 (115)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55554

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=1.6e-18  Score=116.14  Aligned_cols=98  Identities=20%  Similarity=0.280  Sum_probs=82.7

Q ss_pred             hHHHHHHHHhhhccCCCcccccccccccCCHHHHHHHHHh---cCCccc-ccCCCcccC--CChHHHHHHHhHhhCCCcc
Q psy12195        117 KATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQ---THTLMF-TCRRCPSTF--LNSATLSKHVKMEHNSKSY  190 (254)
Q Consensus       117 ~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~---~~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~  190 (254)
                      ...|..|++. |..+. +|.|+.|++.|...+.|..|+..   ...+++ .|+.|++.|  .....|..|+++|++++||
T Consensus         4 ~~~l~~H~~~-H~~~~-~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            4 GSSGKLYGSI-FTGAS-KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCC-CCCCC-SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             chhhhhheee-eCCCC-CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            3456677766 44444 79999999999999999999884   123444 499999999  8999999999999999999


Q ss_pred             cCCCCcccCCCHHHHHHHHHHhhcCC
Q psy12195        191 QCNECPESFERLNKLKRHKFQAHNDS  216 (254)
Q Consensus       191 ~C~~C~~~f~~~~~l~~H~~~~h~~~  216 (254)
                      .|++|++.|...+.|.+|++.+|...
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            99999999999999999999777653

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.71  E-value=1.9e-17  Score=105.81  Aligned_cols=81  Identities=30%  Similarity=0.559  Sum_probs=70.5

Q ss_pred             ccccc--ccccccCCHHHHHHHHHh-cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        134 SIQCN--MCSLVLDSKESLVTHISQ-THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       134 ~~~C~--~C~~~f~~~~~l~~h~~~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +|.|+  .|++.|.+...|..|+.. ..+++|.|+.|++.|.....|..|+++|+++++|.|++|++.|.+.+.|.+|++
T Consensus         4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   83 (90)
T 1a1h_A            4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK   83 (90)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHG
T ss_pred             ceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHH
Confidence            68887  588888888888888763 345889999999999999999999999999999999999999999999999998


Q ss_pred             HhhcC
Q psy12195        211 QAHND  215 (254)
Q Consensus       211 ~~h~~  215 (254)
                      . |.+
T Consensus        84 ~-H~~   87 (90)
T 1a1h_A           84 I-HLR   87 (90)
T ss_dssp             G-GGC
T ss_pred             H-hcc
Confidence            4 444

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=7.1e-18  Score=109.21  Aligned_cols=68  Identities=21%  Similarity=0.258  Sum_probs=48.6

Q ss_pred             hCCCcccCCCCcccCCCHHHHHHHHHHhhcC--CCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        185 HNSKSYQCNECPESFERLNKLKRHKFQAHND--SVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       185 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~--~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      ++++||.|++|+++|...+.|.+|++..|.+  ++++|.|+.|++.|...+.|..|+.+.|+|++||.|.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            4677777777777777777777777644521  2567777777777777777777733777777777774

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=8.5e-18  Score=106.52  Aligned_cols=77  Identities=18%  Similarity=0.408  Sum_probs=66.4

Q ss_pred             HHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCC--CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        177 LSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS--VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       177 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~--~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      +..|+++|++++||.|++|++.|.....|.+|++.+|...  +++|+|+.|++.|.....|..|+ +.|.+++++.|.-+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA-DNCAGPDGVEGENS   81 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHH-HHCCCCCSCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHH-HHccCCCCcccCCC
Confidence            4578889999999999999999999999999998666552  26899999999999999999998 88899999988753

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=4.1e-17  Score=108.34  Aligned_cols=80  Identities=24%  Similarity=0.456  Sum_probs=68.0

Q ss_pred             cccccccccccCCHHHHHHHHHhc-CCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHh
Q psy12195        134 SIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQA  212 (254)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~h~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  212 (254)
                      +|.| .|++.|.+...|..|+... .+++|.|+.|++.|.....|..|+++|+++++|.|++|++.|.....|.+|++.+
T Consensus        10 ~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   88 (110)
T 2csh_A           10 LYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSC   88 (110)
T ss_dssp             CEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHc
Confidence            6777 7777777777777776633 3478999999999999999999999999999999999999999999999999866


Q ss_pred             hc
Q psy12195        213 HN  214 (254)
Q Consensus       213 h~  214 (254)
                      +.
T Consensus        89 ~~   90 (110)
T 2csh_A           89 TK   90 (110)
T ss_dssp             HH
T ss_pred             cc
Confidence            54

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=8e-17  Score=103.75  Aligned_cols=80  Identities=14%  Similarity=0.224  Sum_probs=69.8

Q ss_pred             cccCCChHHHHHHHhHhhCCCcccCCCCcccC-CCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        168 PSTFLNSATLSKHVKMEHNSKSYQCNECPESF-ERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       168 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      ...|.....|..|++++.++++|.|++|++.| .+...|..|++ .| + +++|.|++|++.|...++|..|+.+.|+++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~-~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME-NC-K-QEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHH-HH-C-CCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHH-HH-C-CCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            45677888899999999999999999999999 99999999998 45 5 789999999999999999999944889876


Q ss_pred             CCCC
Q psy12195        247 EGTA  250 (254)
Q Consensus       247 ~~~~  250 (254)
                      ..+-
T Consensus        90 p~~~   93 (96)
T 2ctd_A           90 PSGP   93 (96)
T ss_dssp             SSCS
T ss_pred             CCCC
Confidence            5543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.3e-17  Score=101.49  Aligned_cols=66  Identities=27%  Similarity=0.592  Sum_probs=57.3

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      .+.++++|.|++|++.|.....|.+|++ .|.+ .++|+|++|++.|.....|..|+ +.|.+++||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRR-THTG-EKPYKCDECGKAFIQRSHLIGHH-RVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCC-SCSEECSSSCCEESSHHHHHHHG-GGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHH-HcCC-CcCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            3457789999999999999999999987 5666 67899999999999999999998 88999999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=1.1e-17  Score=108.58  Aligned_cols=80  Identities=15%  Similarity=0.211  Sum_probs=67.9

Q ss_pred             cCCChHHHHHHHhHhhCCCcccCCCCcccCC-CHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCC
Q psy12195        170 TFLNSATLSKHVKMEHNSKSYQCNECPESFE-RLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       170 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      ++.....+..|+++|+++++|.|++|++.|. ....|.+|++.++.. .++|.|++|++.|....+|..|+ +.|.+++|
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~-~~~~~C~~C~k~F~~~~~L~~H~-~~h~~~kp   82 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKL-QDALKCQHCRKQFKSKAGLNYHT-MAEHSAKP   82 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHH-HHHHSCSSSCCCCSCHHHHHHHH-HHHSCSCS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCC-CCCEECCCCCCccCCHHHHHHHH-HHHcCCCC
Confidence            4455566778999999999999999999999 999999999865553 56899999999999999999998 77888888


Q ss_pred             CCC
Q psy12195        249 TAP  251 (254)
Q Consensus       249 ~~c  251 (254)
                      ...
T Consensus        83 ~~~   85 (98)
T 2gqj_A           83 SDA   85 (98)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1e-16  Score=99.79  Aligned_cols=71  Identities=28%  Similarity=0.483  Sum_probs=55.1

Q ss_pred             cCCcccccCC--CcccCCChHHHHHHHh-HhhCCCcccCCC--CcccCCCHHHHHHHHHHhhcCCCCCccCcchhhcc
Q psy12195        157 THTLMFTCRR--CPSTFLNSATLSKHVK-MEHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDF  229 (254)
Q Consensus       157 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f  229 (254)
                      +++++|.|..  |++.|.....|..|++ +|+++++|.|++  |++.|.....|.+|++ .|.+ +++|.|++|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSD-TRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHH-HHHT-SCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHH-HhCC-CCCeeCCCCCCCC
Confidence            3456777776  8888888888888887 688888888887  8888888888888887 4555 5678888888877

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=1.5e-16  Score=97.62  Aligned_cols=64  Identities=31%  Similarity=0.637  Sum_probs=52.8

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCC
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGT  249 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  249 (254)
                      .+.++++|.|++|++.|.....|.+|++ .|.+ .++|+|++|++.|...++|..|+ +.|.+++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKT-VHTG-EKPYRCNICGAQFNRPANLKTHT-RIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHH-HHCC-CCSEECTTTCCEESCHHHHHHHH-HHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHH-HcCC-CCCEECCCCCchhCCHHHHHHHH-HhcCCCCCC
Confidence            3567788888888888888888888887 5655 57888888888888888888888 778888887

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.64  E-value=8.4e-17  Score=100.51  Aligned_cols=63  Identities=24%  Similarity=0.461  Sum_probs=43.6

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      ++.+.++|.|++||++|.+...|.+|++ .|.+ +++|.|++|++.|...++|.+|+++.|++|+
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLR-LLHA-AQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHH-TTSC-SSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhh-hccC-CCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3445667777777777777777777776 4555 5677777777777777777777766776664

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=3.6e-16  Score=99.60  Aligned_cols=78  Identities=22%  Similarity=0.542  Sum_probs=70.9

Q ss_pred             cccccc--cccccCCHHHHHHHHHhcC-CcccccC--CCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHH
Q psy12195        134 SIQCNM--CSLVLDSKESLVTHISQTH-TLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRH  208 (254)
Q Consensus       134 ~~~C~~--C~~~f~~~~~l~~h~~~~~-~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  208 (254)
                      +|.|+.  |++.|.+.+.|..|+.... +++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|...+.|..|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALH   84 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHH
Confidence            688998  9999999999999987332 4899997  6999999999999999999999999999999999999999999


Q ss_pred             HHH
Q psy12195        209 KFQ  211 (254)
Q Consensus       209 ~~~  211 (254)
                      ++.
T Consensus        85 ~~~   87 (89)
T 2wbs_A           85 MKR   87 (89)
T ss_dssp             GGG
T ss_pred             HHh
Confidence            873

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.64  E-value=9.5e-16  Score=99.84  Aligned_cols=80  Identities=25%  Similarity=0.512  Sum_probs=70.7

Q ss_pred             Ccccccc--cccccCCHHHHHHHHHhc-CCcccccC--CCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHH
Q psy12195        133 LSIQCNM--CSLVLDSKESLVTHISQT-HTLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKR  207 (254)
Q Consensus       133 ~~~~C~~--C~~~f~~~~~l~~h~~~~-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  207 (254)
                      .+|.|..  |++.|.....|..|+... .+++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.....|.+
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            3688886  999999999999997743 34889996  699999999999999999999999999999999999999999


Q ss_pred             HHHHh
Q psy12195        208 HKFQA  212 (254)
Q Consensus       208 H~~~~  212 (254)
                      |++.+
T Consensus        94 H~~~H   98 (100)
T 2ebt_A           94 HMKRH   98 (100)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99843

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.63  E-value=1.1e-16  Score=109.45  Aligned_cols=69  Identities=20%  Similarity=0.379  Sum_probs=46.5

Q ss_pred             CChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        172 LNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       172 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .....|..|+ .|++++||.|++||+.|...+.|.+|++. |   .++|.|+.|++.|...++|..|+ +.|.|.
T Consensus        58 ~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~-~~h~~~  126 (129)
T 2wbt_A           58 DESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHV-CKKHNI  126 (129)
T ss_dssp             TTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHH-HHTTCC
T ss_pred             CCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHH-HHHCCc
Confidence            3445555555 46777777777777777777777777763 4   44677777777777777777777 444443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=3.6e-16  Score=97.02  Aligned_cols=68  Identities=16%  Similarity=0.304  Sum_probs=55.3

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHHhhcC-CCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQAHND-SVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      |++++||.|++|++.|.....|.+|++.++.. .+++|.|++|++.|....+|..|++..|.+++|...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            67888888888888888888888888855431 256888999999999888999998888888887754

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.62  E-value=4.2e-17  Score=111.50  Aligned_cols=115  Identities=15%  Similarity=0.229  Sum_probs=86.8

Q ss_pred             hhccCCCCcccccchhhccChHHHHHHHHhhh-ccCCCcccccccccccC------CHHHHHHHHHhcCCcccccCCCcc
Q psy12195         97 VKHYMDINMSCVPCDVLFHNKATLYKHLYLEH-KATSLSIQCNMCSLVLD------SKESLVTHISQTHTLMFTCRRCPS  169 (254)
Q Consensus        97 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~-~~~~~~~~C~~C~~~f~------~~~~l~~h~~~~~~~~~~C~~C~~  169 (254)
                      ..+.+.++|.|...+.....  .+..+...+. ......+.|..|.+.|.      ..+.|..|+.+.+++||.|+.|++
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k   82 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLM   82 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCC
T ss_pred             hhcccccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCc
Confidence            35778889988776544322  2222211110 11112567888877665      667888888877789999999999


Q ss_pred             cCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        170 TFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       170 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      .|.....|..|+++|  ++||.|++|+++|...+.|.+|++.+|+.
T Consensus        83 ~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           83 PFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             EESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             ccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            999999999999999  89999999999999999999999966654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=8.8e-16  Score=95.46  Aligned_cols=68  Identities=24%  Similarity=0.404  Sum_probs=62.4

Q ss_pred             hCCCcccCCC--CcccCCCHHHHHHHHHHhhcCCCCCccCcc--hhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        185 HNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       185 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      +++++|.|..  |++.|.+...|.+|++..|.+ .++|+|++  |++.|.+..+|..|+ +.|.+++||.|..|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   74 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEFS   74 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCSS
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHH-HHhCCCCCeeCCCC
Confidence            5688999987  999999999999999866777 78999999  999999999999999 78999999999865

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.6e-16  Score=93.69  Aligned_cols=62  Identities=23%  Similarity=0.696  Sum_probs=52.1

Q ss_pred             hHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhc
Q psy12195        182 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       182 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      ++|++++||.|++|++.|.+...|.+|++..|..+.++|+|+.|++.|.+.++|..|++..|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            46788899999999999999999999998657433788999999999999999999985554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=3.9e-16  Score=95.26  Aligned_cols=65  Identities=28%  Similarity=0.544  Sum_probs=52.1

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCC
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      .++|++++||.|++|++.|.....|.+|++ .|.+ .++|+|++|++.|.....|..|+ +.|.++.+
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~-~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~~   70 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTG-EKPYKCLECGKAFSQNSGLINHQ-RIHTSGPS   70 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHH-GGGC-SCCEECSSSCCEESSHHHHHHHH-HHHHSSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHH-hcCC-CCCeECCCCCcccCCHHHHHHHH-HhcCCCCC
Confidence            356788888888888888888888888887 4655 67888888888888888888888 66666654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.60  E-value=8.2e-16  Score=96.00  Aligned_cols=59  Identities=22%  Similarity=0.537  Sum_probs=55.2

Q ss_pred             CCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCC
Q psy12195        158 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  216 (254)
Q Consensus       158 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  216 (254)
                      ..++|.|++|++.|.....|..|+++|++++||.|++|+++|.....|.+|++..|+++
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            34789999999999999999999999999999999999999999999999998788774

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=6.6e-16  Score=93.67  Aligned_cols=63  Identities=24%  Similarity=0.435  Sum_probs=46.8

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCC
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGT  249 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  249 (254)
                      ++++++|.|++|++.|.....|.+|++ .|.+ .++|+|++|++.|.....|..|+ +.|.+++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHER-IHCT-DRPFKCNYCSFDTKQPSNLSKHM-KKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHG-GGCC-SCSEECSSSSCEESSHHHHHHHH-HHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHH-HcCC-CCCEeCCCCCCccCCHHHHHHHH-HHHhCCCCC
Confidence            566777888888888888888888876 4555 56788888888888888888887 666666664

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.59  E-value=2.7e-15  Score=94.58  Aligned_cols=77  Identities=22%  Similarity=0.469  Sum_probs=66.8

Q ss_pred             cccc--cccccccCCHHHHHHHHHh-cCCcccccCC--CcccCCChHHHHHHHhHhhCCCcccCCC---CcccCCCHHHH
Q psy12195        134 SIQC--NMCSLVLDSKESLVTHISQ-THTLMFTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCNE---CPESFERLNKL  205 (254)
Q Consensus       134 ~~~C--~~C~~~f~~~~~l~~h~~~-~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  205 (254)
                      ||.|  +.|++.|.+.+.|..|+.. ..+++|.|+.  |++.|.....|..|+++|++   |.|++   |++.|...+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4778  8899999988888888763 3458899988  99999999999999999998   99999   99999999999


Q ss_pred             HHHHHHhh
Q psy12195        206 KRHKFQAH  213 (254)
Q Consensus       206 ~~H~~~~h  213 (254)
                      .+|++.+|
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99998543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.6e-15  Score=93.74  Aligned_cols=64  Identities=27%  Similarity=0.533  Sum_probs=57.8

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      ..+++|.|+.|++.|.....|..|+++|++++||.|++|++.|.....|.+|++ .|.+ +++|+|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~-~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR-VHTG-SGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG-GSCC-CCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH-HhCC-CCCCCC
Confidence            445899999999999999999999999999999999999999999999999998 5766 678887

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.59  E-value=1.6e-16  Score=101.07  Aligned_cols=81  Identities=21%  Similarity=0.357  Sum_probs=66.3

Q ss_pred             cccccccccccCCHHHHHHHHHh-cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHh
Q psy12195        134 SIQCNMCSLVLDSKESLVTHISQ-THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQA  212 (254)
Q Consensus       134 ~~~C~~C~~~f~~~~~l~~h~~~-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  212 (254)
                      +|.|+.|++.|...+.|..|+.. .++++|.|+.|++.|.....|..|+.+|++ .+|.|+.|++.|.....|..|++..
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARL   81 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHH
Confidence            67888888888888888888663 345788888888888888888888888874 7888999999999999999998877


Q ss_pred             hcC
Q psy12195        213 HND  215 (254)
Q Consensus       213 h~~  215 (254)
                      |..
T Consensus        82 h~~   84 (88)
T 1llm_C           82 KKL   84 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=6e-16  Score=100.12  Aligned_cols=68  Identities=19%  Similarity=0.262  Sum_probs=55.8

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHh-Hh---hCCCcccCCCCcccCCCHHHHHHH-HHHhhcCCCCCccCcchh
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVK-ME---HNSKSYQCNECPESFERLNKLKRH-KFQAHNDSVHQIQCPYCI  226 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~~~C~~C~  226 (254)
                      .+++||.|+.|++.|.....|..|++ +|   ++++||.|++||++|...+.|.+| ++ .|.+ +++|.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r-~Htg-ekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLK-YHPG-EENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHH-TSTT-CCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-hcCC-CCCeeCCccc
Confidence            55688888889988888888888887 48   567889999999999998999988 45 6777 7888888754

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.57  E-value=4.1e-15  Score=86.25  Aligned_cols=52  Identities=21%  Similarity=0.394  Sum_probs=27.1

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      ++|.|+.|++.|.....|..|+++|++++||.|++|+++|.....|.+|++.
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            4455555555555555555555555555555555555555555555555543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=5.2e-18  Score=104.00  Aligned_cols=70  Identities=23%  Similarity=0.396  Sum_probs=63.9

Q ss_pred             HHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        175 ATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       175 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      ..|..|+++|.+++||.|++|++.|...+.|..         .++|.|+.|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDE-GNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCS-SCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHH-HhhcCCCCCCCCCC
Confidence            456789999999999999999999999888866         56899999999999999999999 88999999999876

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=9.8e-15  Score=89.44  Aligned_cols=62  Identities=27%  Similarity=0.574  Sum_probs=55.7

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCc
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQI  220 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  220 (254)
                      ..+++|.|+.|++.|.....|..|+++|+++++|.|++|++.|.....|.+|++ .|.+ +++|
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR-IHSG-EKPY   74 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHH-HHCC-SCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHH-hcCC-CCCC
Confidence            456899999999999999999999999999999999999999999999999998 5665 4554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.8e-14  Score=92.69  Aligned_cols=73  Identities=18%  Similarity=0.294  Sum_probs=60.7

Q ss_pred             cccCCHHHHHHHHH-hcCCcccccCCCcccC-CChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        142 LVLDSKESLVTHIS-QTHTLMFTCRRCPSTF-LNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       142 ~~f~~~~~l~~h~~-~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      .+|...+.|..|+. ...+++|.|+.|++.| .....|..|+++| +++||.|.+|+++|...+.|.+|+...|.+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            35555666776654 3446899999999999 9999999999999 999999999999999999999993336765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.54  E-value=6.8e-15  Score=85.29  Aligned_cols=56  Identities=23%  Similarity=0.408  Sum_probs=47.4

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhc
Q psy12195        186 NSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       186 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      +++||.|++|++.|.+...|..|++ .|.+ .++|.|++|++.|...++|..|++..|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLR-THTG-EKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHH-HHHC-CCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHH-HcCC-CCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4689999999999999999999999 5666 679999999999999999999995544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=7.5e-15  Score=86.06  Aligned_cols=56  Identities=32%  Similarity=0.672  Sum_probs=29.2

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      ||.|++|++.|.+.+.|.+|++ .|.+ .++|.|+.|++.|.+.+.|..|+++.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYR-SHTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHH-TTTS-SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHH-HhCC-CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4555555555555555555554 2333 345555555555555555555544455443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.2e-14  Score=88.10  Aligned_cols=60  Identities=20%  Similarity=0.419  Sum_probs=54.9

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCC
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  216 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  216 (254)
                      ..+++|.|+.|++.|.....|..|+++|+++++|.|++|++.|.....|.+|++.++.+.
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            456899999999999999999999999999999999999999999999999999777653

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.52  E-value=2.4e-14  Score=92.20  Aligned_cols=63  Identities=24%  Similarity=0.415  Sum_probs=52.3

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhhcCCCCC--------ccCcchhhccCCchHHHHHHHHhcCCCCCCCCCC
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAHNDSVHQ--------IQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPAR  253 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  253 (254)
                      .|.|++|++.|.....|.+|++..|.+ .++        |.|+.|++.|....+|..|+ +.|++++||.|..
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~-~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   95 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVG-GPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTC-CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHH-HHHHTCCCCSSCC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccC-CCCCCccceeccCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            467888888888888888888754665 444        89999999999999999998 7899999999963

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.52  E-value=1.5e-14  Score=83.84  Aligned_cols=55  Identities=31%  Similarity=0.632  Sum_probs=27.7

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      ||.|++|++.|.+.+.|.+|++ .|.+ .++|.|+.|++.|.+.++|..|+ +.|.++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-THTD-VRPYHCTYCNFSFKTKGNLTKHM-KSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSS-CCCEECSSSSCEESSHHHHHHHH-HSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-hcCC-CCCccCCCCCchhcCHHHHHHHH-HHhccc
Confidence            3455555555555555555554 2333 34555555555555555555555 444433

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.7e-14  Score=84.54  Aligned_cols=56  Identities=30%  Similarity=0.641  Sum_probs=52.6

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +||.|+.|++.|.....|..|+++|++++||.|++|++.|.+.+.|.+|+...|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999999999999999999998657766

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=3e-14  Score=89.95  Aligned_cols=69  Identities=22%  Similarity=0.432  Sum_probs=50.7

Q ss_pred             CcccccCCCcccCCChHHHHHHHhHhhCC----CcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhcc
Q psy12195        159 TLMFTCRRCPSTFLNSATLSKHVKMEHNS----KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDF  229 (254)
Q Consensus       159 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f  229 (254)
                      +++|.|+.|++.|.....|..|++++..+    ++|.|++|++.|.....|.+|++ .|.+ ..++.|..|+..|
T Consensus        13 ~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~-~~~~~~~~~~~~~   85 (86)
T 1x6h_A           13 EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD-NCAG-PDGVEGENSGPSS   85 (86)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHH-HCCC-CCSCCCCCCCCCC
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHH-HccC-CCCcccCCCCCCC
Confidence            46777888888887777788887766554    67888888888888888888877 4444 4577787777655

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.50  E-value=2.3e-14  Score=83.01  Aligned_cols=54  Identities=22%  Similarity=0.548  Sum_probs=50.4

Q ss_pred             ccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhc
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN  214 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  214 (254)
                      ||.|+.|++.|.....|..|+++|++++||.|++|++.|...+.|.+|++.++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            689999999999999999999999999999999999999999999999985443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=3.5e-14  Score=86.41  Aligned_cols=59  Identities=24%  Similarity=0.504  Sum_probs=54.1

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      ..+++|.|+.|++.|.....|..|+++|++++||.|++|++.|.....|.+|++.++.+
T Consensus        10 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A           10 SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            45689999999999999999999999999999999999999999999999999965544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=4.8e-14  Score=87.27  Aligned_cols=63  Identities=19%  Similarity=0.395  Sum_probs=57.2

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhC---CCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCc
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHN---SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQI  220 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  220 (254)
                      .++++|.|+.|++.|.....|..|+++|++   +++|.|++|++.|.....|.+|++..|.+ ..+.
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~-~~~~   68 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA-LLLA   68 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT-TSSC
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC-CCCC
Confidence            467899999999999999999999999996   89999999999999999999999878877 4443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=3.7e-14  Score=84.76  Aligned_cols=58  Identities=21%  Similarity=0.496  Sum_probs=52.7

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhH-h-hCCCcccCCCCcccCCCHHHHHHHHHHhhc
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKM-E-HNSKSYQCNECPESFERLNKLKRHKFQAHN  214 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  214 (254)
                      .++++|.|+.|++.|.....|..|+.+ | .+++||.|++|++.|.+.+.|.+|++.+|.
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            6 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            456899999999999999999999998 7 589999999999999999999999987664

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=3.7e-14  Score=91.82  Aligned_cols=69  Identities=16%  Similarity=0.289  Sum_probs=58.0

Q ss_pred             HHHHHHHHH-hcCCcccccCCCcccCC-ChHHHHHHHhHhhC-CCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        147 KESLVTHIS-QTHTLMFTCRRCPSTFL-NSATLSKHVKMEHN-SKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       147 ~~~l~~h~~-~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      .+.+..|+. +..+++|.|+.|++.|. ....|..|+++|++ +++|.|++|++.|.....|.+|++.+|..
T Consensus         9 ~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A            9 GGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             CCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            334555655 23458999999999999 99999999999998 99999999999999999999999866644

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=2.3e-13  Score=83.94  Aligned_cols=59  Identities=20%  Similarity=0.444  Sum_probs=53.1

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHh-HhhCC-CcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVK-MEHNS-KSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      ..+++|.|+.|++.|.....|..|+. .|.++ ++|.|++|++.|.....|.+|++.+|..
T Consensus        11 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           11 SGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            34589999999999999999999997 57765 8999999999999999999999987876

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.7e-13  Score=83.59  Aligned_cols=57  Identities=32%  Similarity=0.684  Sum_probs=32.1

Q ss_pred             hhCCCcccCC--CCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhc
Q psy12195        184 EHNSKSYQCN--ECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       184 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      +.++++|.|+  .|++.|.....|.+|++ .|.+ .++|.|+.|++.|...+.|..|+ +.|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~~H~-~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIR-IHTG-QKPFQCRICMRNFSRSDHLTTHI-RTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHH-HHHC-CCCEECTTTCCEESCHHHHHHHH-TTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHH-hhCC-CCCeECCCCCchhCCHHHHHHHH-Hhc
Confidence            4455566664  36666666666666655 3333 34566666666666666666665 444

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=1.8e-13  Score=81.73  Aligned_cols=59  Identities=17%  Similarity=0.426  Sum_probs=45.6

Q ss_pred             hCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc-chhhccCCchHHHHHHHHhcCCCCC
Q psy12195        185 HNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP-YCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       185 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      .+++||.|++|+++|. .+.|..|++.  .+ .++|+|+ .|++.|...+.|..|+ +.|...+|
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~--~~-~~p~~C~~~C~k~f~~~~~L~~H~-~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ--CP-RLPVACPNQCGVGTVAREDLPGHL-KDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH--CS-SSEEECTTCCSCCEEETTTHHHHH-HTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH--cC-CcCccCCcccCcccccHHHHHHHH-HhhcccCc
Confidence            4567888888888888 8888888874  44 6788888 8888888888888887 67766654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.38  E-value=9.5e-13  Score=84.61  Aligned_cols=61  Identities=23%  Similarity=0.263  Sum_probs=47.8

Q ss_pred             ccccCCCcccCCChHHHHHHHhH-hhCCCc--------ccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKM-EHNSKS--------YQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      .+.|+.|++.|.....|..|+++ |.++++        |.|++|++.|.....|.+|++ .|.+ +++|+|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTG-EKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH-HHHT-CCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHH-hcCC-CCCCCCC
Confidence            45688888888888888888887 777776        888888888888888888887 4665 5678875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.1e-12  Score=79.95  Aligned_cols=55  Identities=25%  Similarity=0.608  Sum_probs=50.9

Q ss_pred             cCCcccccC--CCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        157 THTLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       157 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      .++++|.|+  .|++.|.....|..|+++|.+++||.|++|++.|...+.|.+|++.
T Consensus        15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   71 (73)
T 1f2i_G           15 PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT   71 (73)
T ss_dssp             CCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred             CCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHh
Confidence            445899997  6999999999999999999999999999999999999999999873

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=1.2e-12  Score=74.70  Aligned_cols=47  Identities=26%  Similarity=0.480  Sum_probs=29.9

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCC
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSE  231 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~  231 (254)
                      +++++||.|++|++.|.....|.+|++..|.+ +++|+|++|++.|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCCCCC
Confidence            45566666666666666666666666545555 566666666666654

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.1e-12  Score=72.24  Aligned_cols=44  Identities=20%  Similarity=0.372  Sum_probs=25.1

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK-CHTG-ERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHH-HHSC-CSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence            4455556666666666666666666666654 3444 455666554

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.2e-12  Score=78.07  Aligned_cols=55  Identities=16%  Similarity=0.243  Sum_probs=48.6

Q ss_pred             CCcccccCCCcccCCChHHHHHHHhHhhCCCcccCC-CCcccCCCHHHHHHHHHHhhcC
Q psy12195        158 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCN-ECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       158 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      .++||.|+.|++.|. ...|..|+++ ++++||.|+ +||++|...+.|..|++ .|..
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~-~hc~   62 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLK-DSCN   62 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHH-TTSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHH-hhcc
Confidence            347899999999999 9999999999 999999999 99999999999999997 4544

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.28  E-value=1.1e-12  Score=72.23  Aligned_cols=44  Identities=20%  Similarity=0.364  Sum_probs=22.7

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQR-VHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHH-HHSS-CCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            4444555555555555555555555555554 3433 345555544

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.4e-12  Score=71.76  Aligned_cols=44  Identities=25%  Similarity=0.335  Sum_probs=22.7

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|++.|.+.+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHER-LHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHH-HCCS-SSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHH-hcCC-CCCCCCCCC
Confidence            3445555555555555555555555555554 3443 445555544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.28  E-value=9.3e-13  Score=72.50  Aligned_cols=44  Identities=18%  Similarity=0.295  Sum_probs=24.0

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN-VHVG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGG-GGSS-SSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHH-HcCC-CCCcCCCCC
Confidence            4455555555555555555555555555554 3444 445555554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.5e-13  Score=72.45  Aligned_cols=44  Identities=20%  Similarity=0.274  Sum_probs=26.3

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQR-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHH-HHSC-CCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            4555666666666666666666666666655 3444 456666655

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.3e-12  Score=71.89  Aligned_cols=44  Identities=20%  Similarity=0.351  Sum_probs=23.2

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSM-VHTA-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHH-HTTC-CCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            4445555555555555555555555555554 3443 445555544

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.2e-12  Score=71.35  Aligned_cols=43  Identities=16%  Similarity=0.259  Sum_probs=24.0

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      +++|++++||.|++||++|.+.+.|.+|++ .|.+ +++|+|++|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAE-EKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHH-HHTS-SCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            445555566666666666666666666655 3444 445555554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=72.25  Aligned_cols=44  Identities=25%  Similarity=0.381  Sum_probs=22.5

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRG-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGG-GTSC-CCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhh-hcCC-CCCCCCCCC
Confidence            3444555555555555555555555555554 3443 345555544

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=72.31  Aligned_cols=44  Identities=18%  Similarity=0.295  Sum_probs=24.5

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQR-IHSG-KKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHG-GGSS-CCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHH-HhcC-CCCCCCCCC
Confidence            4455555566666666666666666666655 3444 445555554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.5e-12  Score=71.69  Aligned_cols=44  Identities=20%  Similarity=0.302  Sum_probs=26.7

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQK-IHTK-QKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHH-HTSC-CCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            4556666666666666666666666666665 3444 456666654

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=71.90  Aligned_cols=44  Identities=27%  Similarity=0.438  Sum_probs=24.2

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ .++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQR-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHT-TTTT-CSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence            4455555555555555555555555555554 3444 445555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=71.87  Aligned_cols=44  Identities=20%  Similarity=0.281  Sum_probs=25.8

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQR-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHG-GGCC-CSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence            4555666666666666666666666666665 4444 455666555

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=9.9e-13  Score=72.38  Aligned_cols=44  Identities=23%  Similarity=0.362  Sum_probs=25.5

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQV-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHH-HHHC-CSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            4455566666666666666666666666655 3444 455666554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.26  E-value=1.4e-12  Score=71.79  Aligned_cols=43  Identities=21%  Similarity=0.314  Sum_probs=20.0

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      +++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|+|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2ely_A            4 GSSGTGEKPFKCVECGKGFSRRSALNVHHK-LHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSTTHHHHHHH-HHSC-CSSCSCCCC
T ss_pred             CCCCCCCCCcccCccCcccCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            344444445555555555544444444444 2333 344444443

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.6e-12  Score=71.57  Aligned_cols=44  Identities=16%  Similarity=0.272  Sum_probs=23.3

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHT-TTTT-CCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            3445555555555555555555555555554 3444 445555544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-12  Score=72.16  Aligned_cols=44  Identities=20%  Similarity=0.345  Sum_probs=23.9

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQR-THAG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHH-HHTT-SCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            4445555555555555555555555555555 3444 445555554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.1e-12  Score=72.18  Aligned_cols=44  Identities=25%  Similarity=0.394  Sum_probs=21.1

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQR-IHTG-VKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHG-GGSC-CCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            3444445555555555555555555555544 3333 344555444

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.8e-12  Score=71.31  Aligned_cols=44  Identities=20%  Similarity=0.260  Sum_probs=24.5

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-THSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHT-TTCC-SCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence            4445555556666666666666566666555 3444 455555554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1e-12  Score=72.30  Aligned_cols=44  Identities=16%  Similarity=0.273  Sum_probs=26.4

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQK-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHH-HHHC-SSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence            4555666666666666666666666666665 3444 456666654

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.3e-12  Score=71.87  Aligned_cols=44  Identities=20%  Similarity=0.226  Sum_probs=21.8

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQR-IHTG-ENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHT-TTTT-SCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            3444555555555555555555555555554 3333 345555544

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=9.5e-13  Score=72.46  Aligned_cols=44  Identities=23%  Similarity=0.308  Sum_probs=26.9

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++||++|.+.+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLK-RHFR-EKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHH-HHHS-TTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHH-HHcC-CCCCCCCCC
Confidence            4556666666666666666666666666665 3444 456666655

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.7e-12  Score=71.45  Aligned_cols=44  Identities=18%  Similarity=0.292  Sum_probs=22.8

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR-VHMG-EKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGG-GGGS-CCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence            3444555555555555555555555555554 3433 345555544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.4e-12  Score=71.78  Aligned_cols=44  Identities=23%  Similarity=0.407  Sum_probs=24.3

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRR-IHTG-YRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHH-HHTC-CCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHH-HcCC-CCCCCCCCC
Confidence            4455555555666556555555555555554 3444 445555554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.26  E-value=9.5e-13  Score=72.47  Aligned_cols=44  Identities=20%  Similarity=0.335  Sum_probs=22.6

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-SHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGG-GSSS-CCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            4444555555555555555555555555554 3443 445555544

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.1e-12  Score=72.22  Aligned_cols=44  Identities=23%  Similarity=0.298  Sum_probs=23.6

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHT-TTSC-SCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            4445555555555555555555555555554 3444 445555554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.4e-12  Score=71.79  Aligned_cols=44  Identities=25%  Similarity=0.368  Sum_probs=23.9

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHT-TTCC-CCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHh-hcCC-CCCCCCCCC
Confidence            4445555555555555555555555555555 3444 445555554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.25  E-value=1.4e-12  Score=71.82  Aligned_cols=44  Identities=25%  Similarity=0.395  Sum_probs=23.4

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQK-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHT-GGGC-CCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence            4445555555555555555555555555554 3444 345555544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.3e-12  Score=71.85  Aligned_cols=44  Identities=25%  Similarity=0.435  Sum_probs=25.0

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQL-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHT-TTCC-CCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            4455556666666666666666666666655 3444 455666554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.5e-12  Score=71.64  Aligned_cols=44  Identities=23%  Similarity=0.321  Sum_probs=24.0

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWR-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHH-HHSS-SSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHH-HHCC-CCCCCCCCC
Confidence            4445555555555555555555555555555 3444 445555554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.1e-12  Score=71.07  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=22.0

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR-LHTG-QRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHH-HHHS-CCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            3444555555555555555555555555554 2333 345555544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.1e-12  Score=71.03  Aligned_cols=44  Identities=20%  Similarity=0.328  Sum_probs=22.2

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHH-TTSS-CCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            3444555555555555555555555555554 3433 345555544

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.7e-12  Score=71.47  Aligned_cols=44  Identities=20%  Similarity=0.339  Sum_probs=24.4

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQK-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGG-GTSC-SSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            4455555556666666666665556655555 3444 455555554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.4e-12  Score=70.80  Aligned_cols=44  Identities=25%  Similarity=0.253  Sum_probs=24.2

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQV-LHMG-QKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHH-HHSC-CSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            4445555555666666665555555555555 3444 445555554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.5e-12  Score=71.66  Aligned_cols=44  Identities=20%  Similarity=0.246  Sum_probs=22.7

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQR-VHMG-EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHT-TTCC-SCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            4444555555555555555555555555554 3444 445555544

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.4e-12  Score=71.78  Aligned_cols=44  Identities=18%  Similarity=0.336  Sum_probs=23.4

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQR-VHTG-EKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGG-GGSC-CCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            4455555555555555555555555555554 3444 445555544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.3e-12  Score=71.85  Aligned_cols=44  Identities=20%  Similarity=0.251  Sum_probs=19.9

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++||++|.+.+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVD-DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHH-HCCS-CCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            3344444444444444444444444444444 2333 344444443

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.8e-12  Score=71.29  Aligned_cols=44  Identities=20%  Similarity=0.316  Sum_probs=24.0

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHM-VHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGG-GGTT-CCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            3445555555555555555555555555554 3444 445555554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=2.5e-12  Score=70.74  Aligned_cols=44  Identities=16%  Similarity=0.257  Sum_probs=24.4

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHH-HSCC-SSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence            3445555556666666666666666666655 3444 455555554

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.3e-12  Score=71.20  Aligned_cols=44  Identities=23%  Similarity=0.255  Sum_probs=19.9

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      +++|++++||.|++|++.|...+.|.+|++..|.+ +++|+|+.|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C   47 (47)
T 2epx_A            4 GSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred             ccccCCCCCEECCccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence            34444444444444444444444444444422333 344444443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.24  E-value=1.9e-12  Score=71.21  Aligned_cols=44  Identities=23%  Similarity=0.333  Sum_probs=24.6

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQR-VHSG-EKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGG-GGTS-CCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence            4455555566666666666666666666654 3444 445555554

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1e-12  Score=72.33  Aligned_cols=44  Identities=25%  Similarity=0.393  Sum_probs=21.0

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRR-VHTG-GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTH-HHHS-CCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHH-hcCC-CCCCCCCCC
Confidence            3444455555555555555555555555544 2333 344555444

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=6.4e-12  Score=71.61  Aligned_cols=45  Identities=16%  Similarity=0.377  Sum_probs=41.5

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHh-HhhCCCcccCCCCcccCCC
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVK-MEHNSKSYQCNECPESFER  201 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  201 (254)
                      ..+++|.|+.|++.|.....|..|++ +|++++||.|++|+++|.+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            44589999999999999999999997 8999999999999999975

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.7e-12  Score=71.38  Aligned_cols=44  Identities=16%  Similarity=0.281  Sum_probs=24.6

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-VHTG-ERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHT-TSCS-CCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHH-hhCC-CCCCCCCCC
Confidence            4455555566666666666666666666655 3444 455555554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.3e-12  Score=70.89  Aligned_cols=44  Identities=23%  Similarity=0.351  Sum_probs=23.3

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQR-THTG-EKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHH-HHSS-CCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHH-HcCC-CCCCCCCCC
Confidence            3445555555555555555555555555555 3443 345555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.22  E-value=3.6e-12  Score=70.07  Aligned_cols=43  Identities=19%  Similarity=0.271  Sum_probs=21.1

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      +++|++++||.|++|++.|.+...|.+|++ .|.+ +++|+|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTR-EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECSSSSCEESSHHHHHHHHG-GGCC-SSCCSCCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            344455555555555555555555555544 3333 345555444

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3e-12  Score=70.40  Aligned_cols=43  Identities=21%  Similarity=0.301  Sum_probs=23.1

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      +++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSGEKPYKCVECGKGYKRRLDLDFHQR-VHTG-EKLSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSEECSSSCCEESSHHHHHHHHH-HHHC-CCCCCSCCC
T ss_pred             CCCCCCCCCeECcccCchhCCHHHHHHHHH-HHcC-CCCCCCCCC
Confidence            444555555555555555555555555555 3433 445555554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.1e-12  Score=72.25  Aligned_cols=44  Identities=18%  Similarity=0.328  Sum_probs=20.6

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-VHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGG-GGSS-CCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCCC
Confidence            3444444555555555555555555555544 3333 344444444

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-12  Score=70.62  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=21.9

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQK-IHTG-EKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHT-TTTT-SCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence            4444555555555555555555555555554 3433 34555544

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.21  E-value=2.1e-13  Score=80.27  Aligned_cols=54  Identities=20%  Similarity=0.490  Sum_probs=45.1

Q ss_pred             HHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHH
Q psy12195        178 SKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLI  236 (254)
Q Consensus       178 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~  236 (254)
                      ..|+++|++++||.|++||++|.....|.    ..|.+ +++|+|+.|++.|....++.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~-~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ----LFDPM-TGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH----HEETT-TTEEBCSSSCCBCEECTTCS
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH----hhcCC-CCCEECCCCCCccccCcccc
Confidence            45778899999999999999999888886    36777 78999999999998877653

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.19  E-value=4.1e-12  Score=69.85  Aligned_cols=44  Identities=27%  Similarity=0.474  Sum_probs=39.1

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGS-SGTG-EKPYECKECGKAFSQTTHLIQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSS-SCSCBCSSSCCBCSCHHHHHHHH-HHHSSCCCSSCCCC
T ss_pred             CCC-ccCC-CCceECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 88999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.19  E-value=1.3e-11  Score=74.87  Aligned_cols=50  Identities=28%  Similarity=0.682  Sum_probs=25.8

Q ss_pred             cccccCC--CcccCCChHHHHHHHhHhhCCCcccCCC--CcccCCCHHHHHHHH
Q psy12195        160 LMFTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHK  209 (254)
Q Consensus       160 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~  209 (254)
                      ++|.|..  |++.|.....|..|+++|++++||.|++  |++.|.....|.+|+
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~   69 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR   69 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHT
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHh
Confidence            4455544  5555555555555555555555555533  555555555555554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.3e-12  Score=69.08  Aligned_cols=44  Identities=20%  Similarity=0.379  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGS-SGTG-EKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSC-CCCCCBTTTTBCCSCHHHHHHHH-HHCCSSSCCCCCCC
T ss_pred             Ccc-cCCC-CCCeECCCCCCccCchHHHHHHH-HhcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 88999999999865

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.7e-12  Score=68.71  Aligned_cols=43  Identities=19%  Similarity=0.295  Sum_probs=22.9

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLR-IHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHH-HHCC-CCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            4445555555555555555555555555554 3443 44555554

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.17  E-value=2.9e-12  Score=73.05  Aligned_cols=50  Identities=12%  Similarity=0.256  Sum_probs=28.2

Q ss_pred             ccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCC
Q psy12195        197 ESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGT  249 (254)
Q Consensus       197 ~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  249 (254)
                      +.|.....|..|++ .|.+ +++|.|++|++.|...++|..|+ +.|+|++||
T Consensus         4 k~~~~~~~l~~h~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRS-RSQS-EQPATCPICYAVIRQSRNLRRHL-ELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHH-HHTS-SCCEECTTTCCEESSHHHHHHHH-HHHTTTSCC
T ss_pred             cccCCCcchhhHHH-hcCC-CCCccCCCCCcccCCHHHHHHHH-HHhccCCCC
Confidence            44555555555555 3444 45566666666666666666665 555666655

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.17  E-value=1.6e-11  Score=74.50  Aligned_cols=57  Identities=23%  Similarity=0.540  Sum_probs=50.2

Q ss_pred             hhCCCcccCCC--CcccCCCHHHHHHHHHHhhcCCCCCccCcc--hhhccCCchHHHHHHHHhc
Q psy12195        184 EHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       184 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h  243 (254)
                      ....++|.|+.  |++.|.....|.+|++ .|.+ +++|+|++  |++.|.....|..|+ +.|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~~~C~k~f~~~~~l~~H~-~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTR-THTG-EKPFSCSWKGCERRFARSDELSRHR-RTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHH-HHSS-SCSEECCCTTCCCEESSHHHHHHHT-TTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHH-hcCC-CCCccCCCCCCCcccCCHHHHHhHh-hcC
Confidence            45678999998  9999999999999998 5666 68999975  999999999999998 544

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.17  E-value=9.2e-12  Score=68.39  Aligned_cols=41  Identities=22%  Similarity=0.420  Sum_probs=37.5

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         6 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTG-EKPFKCVECGKGFSRRSALNVHH-KLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCSBCCSSSCCCBSSTTHHHHHH-HHHSCCSSCSCCCC
T ss_pred             CCCC-CCCcccCccCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            5666 78999999999999999999999 78999999999875

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.8e-12  Score=68.94  Aligned_cols=44  Identities=18%  Similarity=0.320  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ .++|+|+.|++.|...++|..|+ +.|.+++||.|..|
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGS-SGTG-EKPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGPSSG   46 (46)
T ss_dssp             CCC-CCSS-CCSCBCSSSCCBCSSHHHHHHHH-HHHSCCSSCCSCCC
T ss_pred             CCC-CCCC-CCCccCCccChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            444 4666 78999999999999999999998 89999999999875

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.7e-12  Score=69.26  Aligned_cols=44  Identities=18%  Similarity=0.386  Sum_probs=39.1

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGS-SGTG-EKPYKCNECGKVFTQNSHLANHQ-RIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSS-CCCC-CCSSEETTTTEECSSHHHHHHHH-GGGSCCCSCSSCCC
T ss_pred             CCC-CCCC-CCCeECCCcChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 89999999999875

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.5e-12  Score=69.02  Aligned_cols=44  Identities=23%  Similarity=0.400  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ .++|+|+.|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGS-SGTG-EKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGPSSG   46 (46)
T ss_dssp             CCC-SCCC-CCSCBCTTTCCBCSSHHHHHHHH-TTTTTSCCSCCCCC
T ss_pred             Ccc-ccCC-CCCeeCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 88999999999875

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.16  E-value=6e-12  Score=69.15  Aligned_cols=44  Identities=23%  Similarity=0.367  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGS-SGMG-EKTWKCRECDMCFSQASSLRLHQ-NVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSCC-CCCCCCSSSCCCCSSHHHHHHHG-GGGSSSSCSCSSCC
T ss_pred             CcC-ccCC-CcCeECCCCCcccCCHHHHHHHH-HHcCCCCCcCCCCC
Confidence            444 4666 78999999999999999999999 88999999999865

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=68.10  Aligned_cols=44  Identities=18%  Similarity=0.347  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGS-SGTG-EKPFKCDICGKSFCGRSRLNRHS-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSS-SCSCCCSSSCCCCSSHHHHHHHH-HHTTCCCSSSCCCC
T ss_pred             CCC-CCCC-CCCcCCCcCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444 4666 78999999999999999999998 88999999999875

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5e-12  Score=69.48  Aligned_cols=44  Identities=23%  Similarity=0.404  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGS-SGTG-ENPYECHECGKAFSRKYQLISHQ-RTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCS-SCCEECSSSCCEESSHHHHHHHH-HHHTTSCCSCSSCC
T ss_pred             CCC-CCCC-CcCcCCCCCCcccCcHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 88999999999875

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.4e-12  Score=69.37  Aligned_cols=44  Identities=23%  Similarity=0.421  Sum_probs=39.0

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|..|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGS-SGTG-EKPYECSVCGKAFSHRQSLSVHQ-RIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSS-CCSEECSSSCCEESSHHHHHHHH-GGGSSCCCSCSSCC
T ss_pred             ccC-CcCC-CCCeeCCCcCCccCCHHHHHHHH-HHhcCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 89999999999875

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1e-11  Score=68.19  Aligned_cols=44  Identities=18%  Similarity=0.416  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|+.|++.|+..++|..|+ +.|.+++||.|+-|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGS-SGTG-KKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSC-CSSCBCTTTCCBCSSHHHHHHHG-GGTSCCCCCSCCCC
T ss_pred             CCc-CCCC-CcCeECCCCCCeeCCHHHHHHHh-hhcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999998 89999999999865

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.15  E-value=4.7e-12  Score=69.60  Aligned_cols=44  Identities=25%  Similarity=0.418  Sum_probs=39.0

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ .++|.|+.|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGS-SGTG-VKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCC-CSCC-CCSEECSSSSCEESSHHHHHHHG-GGSSSCCCSCCTTC
T ss_pred             ccc-CCCC-CCceECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            444 4666 78999999999999999999999 89999999999875

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.6e-12  Score=68.33  Aligned_cols=44  Identities=18%  Similarity=0.416  Sum_probs=39.0

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|+..++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGS-SGTG-EKPYECSICGKSFTKKSQLHVHQ-QIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSS-CSSC-CCSEECSSSCCEESSHHHHHHHH-HTTSSCCSCCSCCC
T ss_pred             CCC-CCCC-CcCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 89999999999875

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.15  E-value=1.2e-11  Score=66.43  Aligned_cols=35  Identities=26%  Similarity=0.569  Sum_probs=20.3

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      +++|+|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   42 (42)
T 2el5_A            8 ENPYECSECGKAFNRKDQLISHQ-RTHAGESGPSSG   42 (42)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-GGGCCCCSCCCC
T ss_pred             CCCccCCCcChhhCCHHHHHHHH-HhcCCCCCCCCC
Confidence            45555666666666666666665 555566666553

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=6e-12  Score=69.15  Aligned_cols=44  Identities=23%  Similarity=0.432  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGS-SGTG-ERPHKCNECGKSFIQSAHLIQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-CSSC-CCSEECSSSCCEESSHHHHHHHH-HHHSCCCTTSSSCC
T ss_pred             CcC-CcCC-CCCeeCCCCChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            444 5666 78999999999999999999998 88999999999875

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.3e-12  Score=68.58  Aligned_cols=44  Identities=20%  Similarity=0.419  Sum_probs=39.0

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGS-SGTG-EKPYKCNECGKAFSQTSKLARHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSC-CCSS-CCTTCCTTTCCCCSSHHHHHHHH-TTTTTCSCCCSCCC
T ss_pred             CCc-CCCC-CcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999998 88999999999875

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.15  E-value=5.6e-12  Score=69.29  Aligned_cols=44  Identities=23%  Similarity=0.422  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGS-SGTG-EKRYKCNECGKVFSRNSQLSQHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCS-SCTT-SCCEECSSSCCEESSHHHHHHHH-TGGGCCCCCSSSCC
T ss_pred             Ccc-CCCC-CcCcCCCCCcchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999998 88999999999865

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.1e-12  Score=79.85  Aligned_cols=70  Identities=13%  Similarity=0.215  Sum_probs=48.9

Q ss_pred             HHHHhhhcccccCcceeecCcCCcccCCCCccchhhhhccCCCCCCcccccccccccccHHHHHhHHhhhccCCCCcccc
Q psy12195         29 ESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCV  108 (254)
Q Consensus        29 ~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~~~~~h~~~~~~~~~~C~~C~~~~~~~~~l~~h~~~~h~~~~~~~C~  108 (254)
                      ..|..|++. |.++++|.|..|++.|.....|..          +++|.|+.|+..|.....|..|+ ..|.++.+|.|+
T Consensus         4 ~~l~~H~~~-h~~~~~~~C~~C~k~f~~~~~l~~----------~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~~~~~C~   71 (73)
T 2ctu_A            4 GSSGKRQKI-HLGDRSQKCSKCGIIFIRRSTLSR----------RKTPMCEKCRKDSCQEAALNKDE-GNESGKKTSGPS   71 (73)
T ss_dssp             CSCCCCCCC-CCCCSEEECSSSCCEEECCCCCCC----------SSSCCCHHHHHTCSCCCSSCCCS-SCCCCCCCSSCC
T ss_pred             hhHHHHHHH-hCCCCCeeCCcccchhCCHHHhCc----------CCCCCCCCCChhhcCHHHHHHHH-HhhcCCCCCCCC
Confidence            345667776 777777777777777777665544          45677777777777777777776 557777777776


Q ss_pred             cc
Q psy12195        109 PC  110 (254)
Q Consensus       109 ~C  110 (254)
                      .|
T Consensus        72 ~C   73 (73)
T 2ctu_A           72 SG   73 (73)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.2e-11  Score=67.95  Aligned_cols=41  Identities=24%  Similarity=0.457  Sum_probs=37.6

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         6 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTG-EKPFDCIDCGKAFSDHIGLNQHR-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCC-CCSBCCTTTCCCBSSHHHHHHHH-TTTTTCCCCSSCCC
T ss_pred             CcCC-CCCeECCCCCceeCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4666 78999999999999999999999 89999999999865

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.2e-12  Score=69.10  Aligned_cols=44  Identities=18%  Similarity=0.362  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|++|++.|.+.+.|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGS-SGSG-EKPYKCSECGKAFHRHTHLNEHR-RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCC-CSCC-CCSEECSSSCCEESSHHHHHHHH-HHHTCCCSSCSSCC
T ss_pred             Ccc-ccCC-CcCeECCCCCCeeCChHHHHHHH-HHcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999998 88999999999875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.1e-11  Score=65.46  Aligned_cols=34  Identities=29%  Similarity=0.591  Sum_probs=20.4

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      +++|+|+.|++.|...++|..|+ +.|.+++||.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   41 (42)
T 2yte_A            8 EKPYSCAECKETFSDNNRLVQHQ-KMHTVKSGPSS   41 (42)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHH-HHTSCCSSCCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            45566666666666666666665 45666666655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=6e-12  Score=69.16  Aligned_cols=44  Identities=20%  Similarity=0.329  Sum_probs=39.0

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|+.|++.|...++|..|+ +.|++++||.|+.|
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGS-SGSG-EKSHTCDECGKNFCYISALRIHQ-RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCC-CCCC-CSSEECTTTCCEESSHHHHHHHH-TTTCCSCSSCCSCC
T ss_pred             ccc-cCCC-CCCeECCCcCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 89999999999875

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=6.1e-12  Score=69.15  Aligned_cols=44  Identities=23%  Similarity=0.401  Sum_probs=39.0

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|..|
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGS-SGSS-TKSHQCHECGRGFTLKSHLNQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCC-SCSEECSSSCCEESSHHHHHHHH-TTTSCSCCSSCCCC
T ss_pred             CcC-CCCC-CCCeECCcCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 88999999999875

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.14  E-value=1.1e-11  Score=68.05  Aligned_cols=42  Identities=21%  Similarity=0.357  Sum_probs=21.4

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQR-IHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHH-HHTT-SCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHH-HhCC-CCCCCCC
Confidence            4445555555555555555555555555554 3333 3455554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.8e-12  Score=69.23  Aligned_cols=44  Identities=23%  Similarity=0.377  Sum_probs=39.0

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGS-SGTG-VKPYMCNECGKAFSVYSSLTTHQ-VIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-CSSC-CCSEECSSSCCEESCHHHHHHHH-HHHHCCSCCSCCCC
T ss_pred             ccc-ccCC-CcCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 88999999999875

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.2e-11  Score=67.88  Aligned_cols=41  Identities=22%  Similarity=0.430  Sum_probs=37.6

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|..|
T Consensus         6 ~h~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A            6 SGSV-EKPYKCEDCGKGYNRRLNLDMHQ-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCC-CSSCBCSSSCCBCSSHHHHHHHG-GGGGSCCCCCSCCC
T ss_pred             CCCC-CCCeeCcccCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            4666 78999999999999999999999 89999999999875

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=67.64  Aligned_cols=41  Identities=24%  Similarity=0.456  Sum_probs=37.5

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|..|
T Consensus         6 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAG-EKPYGCSECGKAFSSKSYLIIHM-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSC-CCSCBCSSSCCBCSCHHHHHHHH-TTTCCSCSSCCCCC
T ss_pred             CcCC-CCCcCCCccChhhCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            4666 78999999999999999999998 88999999999865

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.4e-11  Score=67.62  Aligned_cols=42  Identities=19%  Similarity=0.355  Sum_probs=19.1

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRR-SHTG-EKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHH-HHSS-SSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHH-hcCC-CCCCCCC
Confidence            3344444444444444444444444444444 2333 3444443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.2e-12  Score=68.83  Aligned_cols=44  Identities=18%  Similarity=0.413  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ .++|.|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGS-SGSG-EKPYKCNECGKVFTQNSHLTNHW-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CSSS-SCSEECSSSCCEESSHHHHHHHH-HHHSSSSCSSCCCC
T ss_pred             Ccc-cCCC-CCCEeCCcCCCccCCHHHHHHHH-HHHCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 78999999999865

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.14  E-value=2.3e-11  Score=67.41  Aligned_cols=38  Identities=18%  Similarity=0.357  Sum_probs=22.2

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcc
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPE  197 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  197 (254)
                      ++|.|+.|++.|.....|..|+++|++++||.|++|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            55555555555555555555555555555555555553

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9e-12  Score=68.43  Aligned_cols=44  Identities=20%  Similarity=0.463  Sum_probs=39.1

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGS-SGSG-EKPYVCDYCGKAFGLSAELVRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-TTCC-CCSEECSSSCCEESSHHHHHHHH-GGGCCCSCCSSCCC
T ss_pred             CCC-CCCC-CCCeECCCCChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 89999999999875

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=9.9e-12  Score=68.27  Aligned_cols=44  Identities=18%  Similarity=0.364  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGS-SGTG-EKPYKCNECGKVFRHNSYLSRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-SCCC-SSSEECSSSCCEESSHHHHHHHH-TTTCCCCCCSCCCC
T ss_pred             ccc-CCCC-CCCeECCCCCchhCChHHHHHHH-hhcCCCCCCCCCCC
Confidence            444 4666 78999999999999999999999 88999999999875

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=67.69  Aligned_cols=41  Identities=20%  Similarity=0.435  Sum_probs=37.3

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         6 ~h~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            6 SGTG-EKPYKCMECGKAFGDNSSCTQHQ-RLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCSS-CCSSSBTTTTBCCSSHHHHHHHH-HHHHSCCCCCCCCC
T ss_pred             CCCC-CCCcCCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4666 78999999999999999999999 78999999999875

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1e-11  Score=67.49  Aligned_cols=41  Identities=20%  Similarity=0.426  Sum_probs=37.3

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         4 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   44 (44)
T 2emx_A            4 GSSG-EKPFGCSCCEKAFSSKSYLLVHQ-QTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCSS-CCCEECSSSSCEESSHHHHHHHH-HHHTSSCSCSCCCC
T ss_pred             CcCC-CcCccCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4666 78999999999999999999999 78999999999865

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.3e-11  Score=67.73  Aligned_cols=35  Identities=23%  Similarity=0.606  Sum_probs=17.8

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      +++|+|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2enf_A           10 EKPYKCNECGKVFTQNSHLVRHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHH-TTTTTSSCCCCS
T ss_pred             CcCeECCCCCcccCCHHHHHHHH-HhhCCCCCCCCC
Confidence            34455555555555555555554 445555555543

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.2e-11  Score=67.88  Aligned_cols=44  Identities=18%  Similarity=0.330  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGS-SGTG-EKPCKCTECGKAFCWKSQLIMHQ-RTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCC-CCCC-CCSEECSSSCCEESSSHHHHHHH-HHCCSCCCSCCCCC
T ss_pred             Ccc-cCCC-CCCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 88999999999875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.7e-11  Score=65.87  Aligned_cols=42  Identities=26%  Similarity=0.411  Sum_probs=37.7

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ .++|+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQK-MHTV-KSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHH-HTSC-CSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHH-HhCC-CCCCCCC
Confidence            5678999999999999999999999999998 5777 7899984

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.13  E-value=1e-11  Score=66.73  Aligned_cols=42  Identities=21%  Similarity=0.424  Sum_probs=37.8

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQR-THAG-ESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHG-GGCC-CCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHH-hcCC-CCCCCCC
Confidence            5678999999999999999999999999998 6777 6899985

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1e-11  Score=68.24  Aligned_cols=44  Identities=20%  Similarity=0.367  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGS-SGTG-EKPYICAECGKAFTIRSNLIKHQ-KIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSC-TTSS-CCSEECSSSCCEESSHHHHHHHH-HHTSCCCCSSCSCC
T ss_pred             ccc-CCCC-CcCeECCCCChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            454 5666 78999999999999999999999 88999999999864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.13  E-value=2.8e-11  Score=66.06  Aligned_cols=40  Identities=23%  Similarity=0.443  Sum_probs=18.4

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      |++++||.|++|++.|...+.|.+|++ .|.+ .++|.|+.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~-~~~~~C~~c   44 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDG-SVGKSGPSS   44 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHH-HHSC-CCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHH-HccC-CCCCCCcCC
Confidence            344444444444444444444444444 2333 344444444

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.5e-11  Score=67.54  Aligned_cols=35  Identities=31%  Similarity=0.576  Sum_probs=17.5

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq2_A           10 GKPYQCNECGKAFSQTSKLARHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             SCSSSCCSSCCCCSSHHHHHHHG-GGGCCCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            34455555555555555555554 445555555543

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=6.3e-12  Score=69.07  Aligned_cols=44  Identities=18%  Similarity=0.425  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|.+.++|..|+ +.|.+++||.|..|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGS-SGSG-ERPYGCNECGKNFGRHSHLIEHL-KRHFREKSSGPSSG   46 (46)
T ss_dssp             CCC-CCSC-CCCEECSSSCCEESSHHHHHHHH-HHHHSTTSSCCSCC
T ss_pred             CCC-CCCC-CCCEEccccCcccCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            444 5666 78999999999999999999998 77999999999875

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.13  E-value=4.8e-11  Score=65.12  Aligned_cols=40  Identities=18%  Similarity=0.274  Sum_probs=37.8

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCc
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECP  196 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  196 (254)
                      ..+++|.|+.|++.|.....|..|+++|+++++|.|++||
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4568999999999999999999999999999999999997

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.5e-11  Score=67.49  Aligned_cols=41  Identities=24%  Similarity=0.420  Sum_probs=18.7

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      +++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~   44 (46)
T 2eow_A            4 GSSGTGEKPYKCNECGKAFRARSSLAIHQA-THSG-EKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCEECTTSCCEESSHHHHHHHHH-HHCC-CSCSCTT
T ss_pred             cCCCCCCCCeeccccCChhcCHHHHHHHHH-HcCC-CCCCCCC
Confidence            344444444444444444444444444444 2333 3444443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.9e-12  Score=69.20  Aligned_cols=44  Identities=20%  Similarity=0.395  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGS-SGTG-EKPYKCNECGKVFTQNSHLARHR-RVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCC-CCCC-CSSEECSSSCCEESSSHHHHHHT-HHHHSCCCSCSCCC
T ss_pred             cCc-CCCC-CCCeECCcCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 88999999999875

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=7.9e-12  Score=68.66  Aligned_cols=41  Identities=22%  Similarity=0.396  Sum_probs=37.5

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         6 ~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en6_A            6 SGSG-EKPYGCNECGKTFSQKSILSAHQ-RTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCS-SCCEEETTTTEEESSHHHHHHHH-HHHSSCCCSSSCCC
T ss_pred             ccCC-CcCeECCCCCcccCchHHHHHHH-HHcCCCCCCCCCCC
Confidence            5666 78999999999999999999999 78999999999875

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=66.94  Aligned_cols=34  Identities=24%  Similarity=0.516  Sum_probs=16.6

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      .++|.|+.|++.|...++|..|+ +.|.+++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2ep1_A           10 EKPYECSDCGKSFIKKSQLHVHQ-RIHTGENPSGP   43 (46)
T ss_dssp             CCSSCCSSSCCCCSSHHHHHHHH-GGGSSSCCCSS
T ss_pred             CCCcCCCCCCchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            34444555555555555555554 44445555544

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.4e-11  Score=67.62  Aligned_cols=44  Identities=20%  Similarity=0.431  Sum_probs=39.3

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGS-SGSG-EKPFKCEECGKRFTQNSQLHSHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             STT-CCCC-CCSEEETTTTEEESSHHHHHHHG-GGGSCCCCSCCCCC
T ss_pred             ccc-CCCC-CCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            455 5666 78999999999999999999999 88999999999875

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=8.3e-12  Score=68.59  Aligned_cols=44  Identities=23%  Similarity=0.474  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGS-SGTG-ERPYICTVCGKAFTDRSNLIKHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-SCSC-CCSEECTTTCCEESSHHHHHHHH-HHHHCSSCSSSCCC
T ss_pred             CCC-CCCC-CCCcCCCCCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 88999999999865

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.6e-11  Score=67.38  Aligned_cols=41  Identities=24%  Similarity=0.452  Sum_probs=37.5

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+.|
T Consensus         6 ~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSR-EKSHQCRECGEIFFQYVSLIEHQ-VLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSC-CCCEECTTTCCEESSHHHHHHHH-HHHSCCSCCCTTCC
T ss_pred             ccCC-CCCEEccccChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            5666 78999999999999999999999 88999999999865

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.2e-11  Score=66.87  Aligned_cols=35  Identities=23%  Similarity=0.569  Sum_probs=17.9

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .++|+|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPS   44 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHH-TTTSCSCCSSTT
T ss_pred             CcCeECCCCCcccCChhHHHHHh-HhcCCCCCCCCC
Confidence            34455555555555555555554 445555555553

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.7e-11  Score=67.27  Aligned_cols=35  Identities=29%  Similarity=0.601  Sum_probs=17.8

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yth_A           10 EKPFQCEECGKRFTQNSHLHSHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             SSSBCCSSSCCCBSSHHHHHHHG-GGGTTCCCSSCC
T ss_pred             CcCCCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            34455555555555555555554 445555555553

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.2e-11  Score=67.93  Aligned_cols=41  Identities=22%  Similarity=0.428  Sum_probs=37.5

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|..|
T Consensus         6 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTG-EKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSC-CCSEECSSSCCEESCHHHHHHHG-GGGTTCCCSSTTCC
T ss_pred             CCCC-CcCccCCCccchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4666 78999999999999999999998 88999999999875

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.3e-11  Score=67.79  Aligned_cols=44  Identities=18%  Similarity=0.403  Sum_probs=38.7

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGS-SGTG-GKHFECTECGKAFTRKSTLSMHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCS-SSSS-SCCEECSSSCCEESCHHHHHHHG-GGTSCSSCSCCCCC
T ss_pred             ccc-ccCC-CCCeECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 89999999999865

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.7e-11  Score=66.49  Aligned_cols=35  Identities=29%  Similarity=0.527  Sum_probs=19.3

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      +++|+|++|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eoh_A           10 KKPYECKECRKTFIQIGHLNQHK-RVHTGERSSGPS   44 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHH-HHCSSCCSCSTT
T ss_pred             CCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            44555555555555555555555 455555555554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.11  E-value=1.3e-11  Score=67.78  Aligned_cols=41  Identities=22%  Similarity=0.457  Sum_probs=37.5

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|++|++.|.+.++|..|+ +.|.+++||.|..|
T Consensus         6 ~h~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAG-VNPYKCSQCEKSFSGKLRLLVHQ-RMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCC-CCSEECSSSSCEESSHHHHHHHH-GGGCCSSCCSCCCC
T ss_pred             CCCC-CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            4666 78999999999999999999998 88999999999875

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.8e-11  Score=67.19  Aligned_cols=41  Identities=22%  Similarity=0.327  Sum_probs=19.1

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      +|++++||.|++|++.|.....|.+|++ .|.+ +++|+|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQR-IHTG-EKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHT-TTSS-SCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHH-HhCC-CCCCCCCCC
Confidence            3444445555555555555555555544 3333 344444443

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=67.09  Aligned_cols=27  Identities=37%  Similarity=0.717  Sum_probs=12.0

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      |++++||.|++|++.|...+.|.+|++
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWI   33 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHT
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHH
Confidence            344444444444444444444444443

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.8e-11  Score=67.20  Aligned_cols=33  Identities=27%  Similarity=0.648  Sum_probs=15.1

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      ++|+|+.|++.|...++|..|+ +.|.+++||.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2ytp_A           11 RHYECSECGKAFARKSTLIMHQ-RIHTGEKPSGP   43 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHH-TTTSCCCCCSS
T ss_pred             CCeECCcCCcccCCHHHHHHHH-HHhCCCCCCCC
Confidence            4444444444444444444444 34444444444

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.8e-11  Score=67.15  Aligned_cols=41  Identities=17%  Similarity=0.382  Sum_probs=37.5

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|..|
T Consensus         6 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2enc_A            6 SGSG-EKPFKCEECGKGFYTNSQCYSHQ-RSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCSEECSSSCCEESSHHHHHHHH-HHSCCSSCCSSCCC
T ss_pred             CCCC-CCCcCCCCCCCcCCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            4666 78999999999999999999998 88999999999865

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.6e-11  Score=66.54  Aligned_cols=33  Identities=30%  Similarity=0.618  Sum_probs=15.5

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      ++|.|+.|++.|...++|..|+ +.|.+++||.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (46)
T 2emg_A           11 NPFICSECGKVFTHKTNLIIHQ-KIHTGERPSGP   43 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHH-TTTSCCCCSCS
T ss_pred             CCEECCccCcccCCHHHHHHHH-HHhCCCCCCCC
Confidence            4444444444444444444444 44444444444

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.5e-11  Score=67.55  Aligned_cols=44  Identities=18%  Similarity=0.376  Sum_probs=38.7

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGS-SGTG-EKPYKCHECGKVFRRNSHLARHQ-LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CTTC-CCCEECTTTCCEESSHHHHHHHH-TTTCCCCCSCCSCC
T ss_pred             CCc-CCCC-CCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444 4666 78999999999999999999998 88999999999865

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.3e-11  Score=66.12  Aligned_cols=35  Identities=23%  Similarity=0.578  Sum_probs=18.1

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      +++|.|++|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2en9_A           10 KKLFKCNECKKTFTQSSSLTVHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCBCTTTCCBCSSHHHHHHHH-HHHTSSCCCSCC
T ss_pred             CCCEECCccCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            44555555555555555555554 445555555553

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.5e-11  Score=67.50  Aligned_cols=44  Identities=20%  Similarity=0.365  Sum_probs=39.6

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-IHTG-ENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHG-GGSS-SCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            47788999999999999999999999999998 5777 78999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=1.3e-11  Score=67.12  Aligned_cols=38  Identities=24%  Similarity=0.462  Sum_probs=25.0

Q ss_pred             hcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        213 HNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       213 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus         7 H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2yu5_A            7 GAG-ENPFKCSKCDRVFTQRNYLVQHE-RTHARKSGPSSG   44 (44)
T ss_dssp             CSC-CCSEECSSSSCEESSSHHHHHHH-HHCCCCCSSCCC
T ss_pred             cCC-CCCeECCCCCchhCCHHHHHHHh-HhcCCCCCCCCC
Confidence            444 55666777777777777777776 566666776664

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.5e-11  Score=66.59  Aligned_cols=30  Identities=23%  Similarity=0.540  Sum_probs=13.8

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +++|++++||.|++|++.|...+.|.+|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2em3_A            4 GSSGTGEKPYECKVCSKAFTQKAHLAQHQK   33 (46)
T ss_dssp             CCCCSSCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHH
Confidence            344444444444444444444444444444

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.1e-11  Score=67.25  Aligned_cols=42  Identities=21%  Similarity=0.424  Sum_probs=37.5

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|.|++|++.|...++|..|++..|.+++||.|..|
T Consensus         6 ~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            6 SGTG-KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCC-CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccCC-CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4666 78999999999999999999999339999999999875

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.7e-11  Score=67.33  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=19.9

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR-VHTQ-ETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHH-HHSS-CCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHH-HhCC-CCCCCCC
Confidence            3444445555555555555555555555544 2333 3444443

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.10  E-value=1.5e-11  Score=67.51  Aligned_cols=44  Identities=20%  Similarity=0.360  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGS-SGTG-EKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCC-SCCC-CCSEECSSSCCEESSHHHHHHHG-GGGTSCCCCSTTCC
T ss_pred             CCC-CCCC-CcCeECCccccccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            444 5666 78999999999999999999998 88999999999865

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.3e-11  Score=66.75  Aligned_cols=44  Identities=23%  Similarity=0.434  Sum_probs=39.3

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKR-VHTG-ERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHH-HCSS-CCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            36788999999999999999999999999998 6776 78999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.5e-11  Score=67.56  Aligned_cols=44  Identities=30%  Similarity=0.471  Sum_probs=39.6

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      +|+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQR-VHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGG-GGCC-CCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence            47788999999999999999999999999998 6777 78999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.2e-11  Score=66.81  Aligned_cols=41  Identities=20%  Similarity=0.349  Sum_probs=18.6

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      +++|++++||.|++|++.|.....|.+|++ .|.+ +++|.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHS-VHSG-ERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTT-TTTS-CCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHH-hcCC-CCCCCCC
Confidence            334444444444444444444444444443 2333 3444443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.4e-12  Score=69.03  Aligned_cols=44  Identities=20%  Similarity=0.409  Sum_probs=39.0

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|..|
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGS-SGTG-EKPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCC-CCSS-CCSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCC-CCCC-CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            444 4666 78999999999999999999999 89999999999875

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2e-11  Score=66.98  Aligned_cols=42  Identities=21%  Similarity=0.425  Sum_probs=21.6

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-SHTG-ERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHH-HHTC-CCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHH-HcCC-CCCCCCC
Confidence            4445555555555555555555555555554 3333 3455554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.2e-11  Score=65.50  Aligned_cols=34  Identities=26%  Similarity=0.519  Sum_probs=19.9

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      .++|.|++|++.|...++|..|+ +.|.+++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2en7_A           10 MKPYVCNECGKAFRSKSYLIIHT-RTHTGESGPSS   43 (44)
T ss_dssp             SSSSCCTTTCCCCSSHHHHHHHH-TTTCCSSSSCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHh-hhcCCCCCCCC
Confidence            45555655666666666666665 55555666555

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.3e-11  Score=66.74  Aligned_cols=35  Identities=26%  Similarity=0.548  Sum_probs=19.1

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      +++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq1_A           10 EKPYKCNECGKAFRAHSNLTTHQ-VIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCTTTTCCCSSHHHHHHHH-TTTCCSCCSSCC
T ss_pred             CCCeECCcCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            44555555555555555555555 455555555554

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.1e-11  Score=65.53  Aligned_cols=34  Identities=26%  Similarity=0.577  Sum_probs=18.6

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      .++|+|+.|++.|...++|..|+ +.|.+++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eof_A           10 EKPYECNECQKAFNTKSNLMVHQ-RTHTGESGPSS   43 (44)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHH-HHTTTSSCSCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHH-HHhCCCCCCCC
Confidence            44555555555555555555555 44555555555

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.6e-11  Score=66.57  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=20.4

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQR-IHTG-EKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHH-HHHS-CCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHH-hcCC-CCCCCCC
Confidence            3444555555555555555555555555544 2333 3445544

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.9e-11  Score=67.10  Aligned_cols=39  Identities=23%  Similarity=0.450  Sum_probs=36.1

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus         6 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em4_A            6 SGTG-QRPYECIECGKAFKTKSSLICHR-RSHTGEKPSGPS   44 (46)
T ss_dssp             CCCC-SSSEECSSSCCEESSHHHHHHHH-HHHSSSSCCCCC
T ss_pred             ccCC-CcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCC
Confidence            5666 78999999999999999999998 889999999997

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.1e-11  Score=66.21  Aligned_cols=34  Identities=26%  Similarity=0.522  Sum_probs=18.5

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      +++|+|++|++.|...++|..|+ +.|.+++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2eoj_A           10 ENPYECCECGKVFSRKDQLVSHQ-KTHSGQSGPSS   43 (44)
T ss_dssp             CCSCEETTTTEECSSHHHHHHHH-TTSSSSCSCCC
T ss_pred             CcCeeCCCCCCccCCHHHHHHHH-HHcCCCCCCCC
Confidence            44555555555555555555555 45555555555

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.1e-11  Score=66.24  Aligned_cols=35  Identities=29%  Similarity=0.586  Sum_probs=19.6

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .++|+|+.|++.|...++|..|+ +.|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHH-TTTSSSCCCCTT
T ss_pred             CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            44555555555555555555555 555555555554

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.8e-11  Score=67.22  Aligned_cols=41  Identities=29%  Similarity=0.453  Sum_probs=18.1

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      +++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~p~~C~   44 (46)
T 2yts_A            4 GSSGTGEKPYICNECGKSFIQKSHLNRHRR-IHTG-EKPSGPS   44 (46)
T ss_dssp             SCCCCSCCSEECSSSCCEESSHHHHHHHGG-GTSS-CCSSCCC
T ss_pred             CCCCCCCcCEECCCCChhhCChHHHHHHHH-hcCC-CCCcCCC
Confidence            344444444444444444444444444443 3333 3344443

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.3e-11  Score=66.75  Aligned_cols=44  Identities=25%  Similarity=0.388  Sum_probs=39.6

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG-IHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHT-TTTT-SSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHH-hhCC-CCCCCCCC
Confidence            47788999999999999999999999999998 6777 78999975

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.7e-11  Score=66.47  Aligned_cols=35  Identities=29%  Similarity=0.621  Sum_probs=17.6

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2ytf_A           10 EKPFECSECQKAFNTKSNLIVHQ-RTHTGEKPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-HTSCSSSSSCCC
T ss_pred             CCCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            34455555555555555555554 445555555543

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.10  E-value=2e-11  Score=69.53  Aligned_cols=51  Identities=12%  Similarity=0.113  Sum_probs=44.1

Q ss_pred             cccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCc
Q psy12195        168 PSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQI  220 (254)
Q Consensus       168 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  220 (254)
                      ++.|.....|..|+++|++++||.|++||+.|...+.|.+|++ .|.+ +++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE-LRHF-AKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH-HHTT-TSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH-Hhcc-CCCC
Confidence            4667788888999999999999999999999999999999998 5666 5665

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.6e-11  Score=67.41  Aligned_cols=44  Identities=20%  Similarity=0.354  Sum_probs=39.5

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      +|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR-VHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGG-GGTT-CCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHH-hcCC-CCCCCCCC
Confidence            47788999999999999999999999999998 6776 68999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3e-11  Score=66.29  Aligned_cols=30  Identities=23%  Similarity=0.517  Sum_probs=14.1

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +++|++++||.|++|++.|...+.|.+|++
T Consensus         4 ~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2emi_A            4 GSSGTGERHYECSECGKAFIQKSTLSMHQR   33 (46)
T ss_dssp             CCSCSSCCCEECSSSCCEESSHHHHHHHHG
T ss_pred             CcccCCCCCCCCCCCCcccCCHHHHHHHHh
Confidence            344444444444444444444444444444

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.4e-11  Score=67.60  Aligned_cols=41  Identities=22%  Similarity=0.411  Sum_probs=37.5

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+-|
T Consensus         6 ~h~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTG-EKPYKCEKCGKGYNSKFNLDMHQ-KVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSS-CCSEEETTTTEEESCHHHHHHHH-TTSCSCCSSCCSCC
T ss_pred             CCCC-CCCeECCCCCCccCCHHHHHHHH-HhhCCCCCCCCCCC
Confidence            4666 78999999999999999999999 88999999999865

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.7e-11  Score=65.77  Aligned_cols=43  Identities=23%  Similarity=0.317  Sum_probs=38.8

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-THTG-ESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHT-TTCC-SSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhh-hcCC-CCCCCCC
Confidence            47788999999999999999999999999998 6777 7899985

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.9e-11  Score=67.09  Aligned_cols=44  Identities=23%  Similarity=0.409  Sum_probs=39.5

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV-IHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHT-TTCC-SCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            47788999999999999999999999999998 6776 78999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=2e-11  Score=66.30  Aligned_cols=43  Identities=16%  Similarity=0.318  Sum_probs=35.3

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      +|+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER-THAR-KSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHH-HCCC-CCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhH-hcCC-CCCCCCC
Confidence            46778888899999999999999999999987 5666 6788874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.2e-11  Score=67.93  Aligned_cols=44  Identities=20%  Similarity=0.357  Sum_probs=39.6

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQR-IHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHT-TTSC-CCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            37788999999999999999999999999998 6777 78999974

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.5e-11  Score=67.48  Aligned_cols=43  Identities=21%  Similarity=0.475  Sum_probs=38.2

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPAR  253 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  253 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+-
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGS-SGTG-EKPYRCAECGKAFTDRSNLFTHQ-KIHTGEKPSGPSS   45 (46)
T ss_dssp             CCS-SSSC-CCSEECSSSCCEESSHHHHHHHH-TTTTTSCCCCTTC
T ss_pred             CCC-CCCC-CCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            444 5666 78999999999999999999999 8999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.7e-11  Score=66.49  Aligned_cols=44  Identities=18%  Similarity=0.342  Sum_probs=39.5

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR-VHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHT-TTSS-SCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence            47788999999999999999999999999998 6777 78999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.2e-11  Score=66.17  Aligned_cols=44  Identities=20%  Similarity=0.342  Sum_probs=39.2

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQR-IHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHH-HHTS-SCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence            36788999999999999999999999999998 5766 68999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.5e-11  Score=65.92  Aligned_cols=43  Identities=23%  Similarity=0.410  Sum_probs=38.7

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      .|+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQR-THTG-ESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHH-HTTT-SSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHH-HhCC-CCCCCCC
Confidence            47788999999999999999999999999998 5776 6899985

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.5e-11  Score=67.51  Aligned_cols=42  Identities=19%  Similarity=0.368  Sum_probs=37.3

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |++ .|.+ .++|+|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGS-SGTG-EKPYKCNECGKAFRARSSLAIHQ-ATHSGEKPSGPS   44 (46)
T ss_dssp             CCC-CSCC-CCCEECTTSCCEESSHHHHHHHH-HHHCCCSCSCTT
T ss_pred             ccC-CCCC-CCCeeccccCChhcCHHHHHHHH-HHcCCCCCCCCC
Confidence            444 5666 78999999999999999999999 789999999996

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.6e-11  Score=66.51  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=39.4

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRG-IHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHT-TTSC-SCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhH-hcCC-CCCCCCCC
Confidence            47788999999999999999999999999998 6777 78999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.8e-11  Score=66.39  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=39.5

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|.....|.+|++ .|.+ +++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQK-IHTG-ERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHT-TTSC-CCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            47788999999999999999999999999998 6777 78999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.6e-11  Score=67.45  Aligned_cols=42  Identities=21%  Similarity=0.472  Sum_probs=37.4

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |++ .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|+
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGS-SGTG-EKPYECKVCSKAFTQKAHLAQHQ-KTHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCSS-CCSEECSSSCCEESSHHHHHHHH-HHHCCCCCCCSC
T ss_pred             CCC-CCCC-CcCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            444 5666 78999999999999999999999 789999999997

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=4.1e-11  Score=66.36  Aligned_cols=42  Identities=21%  Similarity=0.388  Sum_probs=29.7

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhh
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  227 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~  227 (254)
                      +.++++|.|++|++.|.....|.+|++ .|.+ +++|+|++|+|
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKL-SHSG-EKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGG-GSCS-CCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHH-hcCC-CCCccCCCCCC
Confidence            456677777777777777777777776 4555 56777777764

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-11  Score=66.94  Aligned_cols=41  Identities=20%  Similarity=0.353  Sum_probs=37.4

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|..|
T Consensus         6 ~h~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em8_A            6 SGSG-EKPYKCVECGKGYKRRLDLDFHQ-RVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCS-CCSEECSSSCCEESSHHHHHHHH-HHHHCCCCCCSCCC
T ss_pred             CCCC-CCCeECcccCchhCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            4666 78999999999999999999999 78999999999875

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.4e-11  Score=66.67  Aligned_cols=35  Identities=29%  Similarity=0.600  Sum_probs=16.8

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLTQHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-TTTSSCCSSCSC
T ss_pred             CCCeECCCCCCccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            34444444444444444444444 444444444443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-11  Score=66.55  Aligned_cols=37  Identities=30%  Similarity=0.509  Sum_probs=24.1

Q ss_pred             hcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        213 HNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       213 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      |.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|
T Consensus         6 H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2ytb_A            6 SGG-EKPYRCDQCGKAFSQKGSLIVHI-RVHTGSGPSSG   42 (42)
T ss_dssp             CCS-CCSBCCTTTTCCBSSHHHHHTTG-GGTSCCSCCCC
T ss_pred             cCC-CCCeeCCCccchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            444 55666666666666666666666 56666666665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.07  E-value=2.3e-11  Score=66.73  Aligned_cols=42  Identities=21%  Similarity=0.437  Sum_probs=37.3

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |++ .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGS-SGTG-EKPFECAECGKSFSISSQLATHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             CCC-CCCC-CCSEECSSSSCEESSHHHHHHHH-HHHTTSCSSSSC
T ss_pred             CCC-CCCC-CCCEECCCCCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            444 5666 78999999999999999999999 889999999996

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-11  Score=67.54  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=37.3

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |++ .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|+
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGS-SGTG-EKPYSCNVCGKAFVLSAHLNQHL-RVHTQETLSGPS   44 (46)
T ss_dssp             SCC-CCSS-CCSEEETTTTEEESSHHHHHHHH-HHHSSCCSSSCC
T ss_pred             ccc-cCCC-CCCeECcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            444 5666 78999999999999999999998 889999999996

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.5e-11  Score=65.89  Aligned_cols=43  Identities=21%  Similarity=0.387  Sum_probs=38.7

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      .|+++|++++||.|++|+++|...+.|.+|++ .|.+ .++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQK-THSG-QSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHT-TSSS-SCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHH-HcCC-CCCCCCC
Confidence            47889999999999999999999999999998 6777 7899985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.4e-11  Score=67.68  Aligned_cols=42  Identities=19%  Similarity=0.372  Sum_probs=37.3

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |++ .|.+ +++|+|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGS-SGTG-EKPYKCSDCGKAFTRKSGLHIHQ-QSHTGERHSGPS   44 (46)
T ss_dssp             CCC-CCCS-CCCEECSSSCCEESSHHHHHHHH-HHHTCCCBTTTB
T ss_pred             ccc-ccCC-CCCEECcccCCccCCHhHHHHHH-HHcCCCCCCCCC
Confidence            444 4666 78999999999999999999999 889999999996

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.8e-11  Score=66.44  Aligned_cols=42  Identities=19%  Similarity=0.408  Sum_probs=37.2

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |++ .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|+
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGS-SGTG-ERHYECSECGKAFIQKSTLSMHQ-RIHRGEKPSGPS   44 (46)
T ss_dssp             CCC-SCSS-CCCEECSSSCCEESSHHHHHHHH-GGGCSCCCCSCC
T ss_pred             CCc-ccCC-CCCCCCCCCCcccCCHHHHHHHH-hHhCCCCCCCCC
Confidence            444 5666 78999999999999999999998 889999999996

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3e-11  Score=66.29  Aligned_cols=44  Identities=18%  Similarity=0.339  Sum_probs=39.5

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|.+.+.|.+|++ .|.+ +++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR-THTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHH-TSCS-SSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            46788999999999999999999999999998 6777 78999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=5.1e-11  Score=64.65  Aligned_cols=35  Identities=26%  Similarity=0.504  Sum_probs=22.5

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .++|.|++|++.|...++|..|+ +.|++++||.|.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (44)
T 2eou_A           10 KTTSECQECGKIFRHSSLLIEHQ-ALHAGESGPSSG   44 (44)
T ss_dssp             SCCCCCTTTCCCCSSHHHHHHHH-HHHTTSCCCCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHH-HHHCCCCCCCCC
Confidence            45666666666666666666666 556666666663

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=4e-11  Score=64.38  Aligned_cols=34  Identities=24%  Similarity=0.453  Sum_probs=19.9

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      +++|+|+.|++.|...++|..|+ +.|.+++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2eos_A            9 EKPYPCEICGTRFRHLQTLKSHL-RIHTGSGPSSG   42 (42)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHT-TTTSCCSSTTC
T ss_pred             CCCEECCCCCCccCCHHHHHHHH-HhcCCCCCCCC
Confidence            45556666666666666666665 55556666554

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.06  E-value=3.2e-11  Score=64.73  Aligned_cols=37  Identities=14%  Similarity=0.182  Sum_probs=23.5

Q ss_pred             hcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        213 HNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       213 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      |.+ +++|.|++|++.|...++|..|+ +.|.+++||.|
T Consensus         6 H~~-~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~k~~~C   42 (42)
T 2epc_A            6 SGG-ETPYLCGQCGKSFTQRGSLAVHQ-RSCSQSGPSSG   42 (42)
T ss_dssp             CCS-SCCEECSSSCCEESSHHHHHHHH-HHTTCCCCCCC
T ss_pred             CCC-CCCeECCCCCcccCCHHHHHHHh-hhcCCCCCCCC
Confidence            444 55666666666666666666666 56666666665

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=4.2e-11  Score=65.02  Aligned_cols=34  Identities=32%  Similarity=0.609  Sum_probs=18.9

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      +++|.|+.|++.|...++|..|+ +.|.+++||.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   43 (44)
T 2emb_A           10 RKRYECSKCQATFNLRKHLIQHQ-KTHAAKSGPSS   43 (44)
T ss_dssp             CSSEECTTTCCEESCHHHHHHHG-GGGCCCCCTTC
T ss_pred             CCCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCC
Confidence            44555555555555555555555 45555555555

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.2e-11  Score=66.16  Aligned_cols=33  Identities=21%  Similarity=0.553  Sum_probs=14.9

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      ++|+|++|++.|...++|..|+ +.|.+++||.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   43 (46)
T 2emz_A           11 RPFKCNECGKGFGRRSHLAGHL-RLHSREKSSGP   43 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHH-HHHHHTTCCCS
T ss_pred             CCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCC
Confidence            3444444444444444444444 34444444444

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.4e-11  Score=65.27  Aligned_cols=41  Identities=20%  Similarity=0.362  Sum_probs=32.1

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGG-GTSC-CSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHH-HhCC-CCCCCC
Confidence            5677888888888888888888888888877 5666 567776

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.2e-11  Score=66.18  Aligned_cols=35  Identities=29%  Similarity=0.569  Sum_probs=20.3

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eq3_A           10 EKPYECNQCGKAFSVRSSLTTHQ-AIHTGKKPSGPS   44 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHH-TTSCCCCCCCSC
T ss_pred             CCCeECCCCChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            45555555555566555665655 555555665554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=2.9e-11  Score=64.92  Aligned_cols=41  Identities=24%  Similarity=0.378  Sum_probs=37.0

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IHTG-SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTT-TTSC-CSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHH-hcCC-CCCCCC
Confidence            5678999999999999999999999999998 6776 678987

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.2e-11  Score=66.17  Aligned_cols=39  Identities=28%  Similarity=0.545  Sum_probs=36.0

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|+
T Consensus         6 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eon_A            6 SGTG-EKPYKCQVCGKAFRVSSHLVQHH-SVHSGERPSGPS   44 (46)
T ss_dssp             SCSS-CCSCBCSSSCCBCSSHHHHHHHT-TTTTSCCSCTTS
T ss_pred             CCCC-CcccCCCCCCcccCcHHHHHHHH-HhcCCCCCCCCC
Confidence            4666 78999999999999999999999 889999999996

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.05  E-value=5.2e-11  Score=63.89  Aligned_cols=41  Identities=17%  Similarity=0.305  Sum_probs=31.8

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      |+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~-~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQ-SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHH-HTTC-CCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhh-hcCC-CCCCCC
Confidence            4567788888888888888888888888887 5666 567776

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=7.7e-11  Score=63.93  Aligned_cols=42  Identities=17%  Similarity=0.237  Sum_probs=31.8

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      |+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQA-LHAG-ESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHH-HHTT-SCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHH-HHCC-CCCCCCC
Confidence            4566778888888888888888888888877 4555 6677774

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.9e-11  Score=67.08  Aligned_cols=44  Identities=20%  Similarity=0.373  Sum_probs=39.4

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR-IHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHT-TTSS-CCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHH-HcCC-CCCCCCCC
Confidence            47788999999999999999999999999998 6776 78999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3e-11  Score=66.30  Aligned_cols=42  Identities=21%  Similarity=0.434  Sum_probs=37.3

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |++ .|.+ .++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus         3 H~~-~H~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGS-SGTG-EKPYNCEECGKAFIHDSQLQEHQ-RIHTGEKPSGPS   44 (46)
T ss_dssp             SSS-SSSC-CCSEECTTTCCEESSHHHHHHHH-HHHHSCCCSSST
T ss_pred             CCc-CcCC-CcCccCCCCCCCcCCHHHHHHHH-HhcCCCCCCCCC
Confidence            444 5666 78999999999999999999998 889999999996

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=3.3e-11  Score=65.42  Aligned_cols=43  Identities=21%  Similarity=0.400  Sum_probs=38.8

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      .|+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQK-THAA-KSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGG-GGCC-CCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHH-HcCC-CCCcCCC
Confidence            47788999999999999999999999999998 6777 7899985

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.1e-11  Score=65.73  Aligned_cols=40  Identities=20%  Similarity=0.536  Sum_probs=36.6

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPAR  253 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  253 (254)
                      .|.+ +++|.|+.|++.|...++|..|+ +.|.+++||.|+.
T Consensus         6 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2em2_A            6 SGSG-EKPFKCKECGKAFRQNIHLASHL-RIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCC-CCSEECSSSCCEESSHHHHHHHH-HHHCCCCSSCSSC
T ss_pred             CCCC-CCCEECCcCCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            4666 78999999999999999999999 8899999999975

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.8e-11  Score=65.46  Aligned_cols=38  Identities=29%  Similarity=0.555  Sum_probs=24.2

Q ss_pred             hcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        213 HNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       213 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |.+ +++|.|++|++.|...++|..|+ +.|.+++||.|+
T Consensus         7 h~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2enh_A            7 GTG-EKPYECDVCRKAFSHHASLTQHQ-RVHSGEKPSGPS   44 (46)
T ss_dssp             CCC-SSSCBCTTTCCBCSSSHHHHHHG-GGSCCSCCCCCC
T ss_pred             cCC-CCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            444 55666666666666666666666 566666666664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.2e-11  Score=66.82  Aligned_cols=44  Identities=20%  Similarity=0.345  Sum_probs=38.8

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR-LHSR-EKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHH-HHHH-TTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            47788999999999999999999999999998 5666 67999973

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.3e-11  Score=66.76  Aligned_cols=35  Identities=26%  Similarity=0.484  Sum_probs=21.2

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      +++|.|++|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2en3_A           10 EKPFQCKECGMNFSWSCSLFKHL-RSHERTDPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHH-HHHHHSCCSSCS
T ss_pred             CCCeeCcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            45566666666666666666665 555666666664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.9e-11  Score=65.81  Aligned_cols=44  Identities=20%  Similarity=0.360  Sum_probs=39.5

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA-IHTG-KKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHT-TSCC-CCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            47788999999999999999999999999998 6777 78999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.1e-11  Score=66.21  Aligned_cols=42  Identities=19%  Similarity=0.385  Sum_probs=37.4

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |++ .|.+ .++|.|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus         3 H~~-~H~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGS-SGTG-EKPYICNECGKSFIQKSHLNRHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CSC-CCCS-CCSEECSSSCCEESSHHHHHHHG-GGTSSCCSSCCC
T ss_pred             CCC-CCCC-CcCEECCCCChhhCChHHHHHHH-HhcCCCCCcCCC
Confidence            444 4666 78999999999999999999998 899999999996

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.7e-11  Score=64.50  Aligned_cols=34  Identities=21%  Similarity=0.421  Sum_probs=17.0

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      +++|.|+.|++.|.+.++|..|+ +.|.+++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2en2_A            9 EKPYKCETCGARFVQVAHLRAHV-LIHTGSGPSSG   42 (42)
T ss_dssp             SCSEECTTTCCEESSHHHHHHHT-HHHHSCCSSCC
T ss_pred             CCCEeCCCcChhhCCHHHHHHHH-HHcCCCCCCCC
Confidence            34455555555555555555554 44455555544

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.6e-10  Score=63.34  Aligned_cols=39  Identities=18%  Similarity=0.278  Sum_probs=36.6

Q ss_pred             cCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCC
Q psy12195        157 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNEC  195 (254)
Q Consensus       157 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  195 (254)
                      ..+++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            8 EGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456899999999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=2.3e-11  Score=66.73  Aligned_cols=43  Identities=21%  Similarity=0.305  Sum_probs=34.0

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHER-TDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHH-HHHH-SCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHH-HhCC-CCCCCCC
Confidence            36677888888888888888888888888887 4555 5688875

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=1.6e-10  Score=62.28  Aligned_cols=35  Identities=20%  Similarity=0.303  Sum_probs=23.0

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .++|.|+.|++.|...++|..|+ +.|++++||.|+
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   42 (43)
T 2yrm_A            8 NGAFFCNECDCRFSEEASLKRHT-LQTHSDKSGPSS   42 (43)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHH-HHHTCTTCSSSC
T ss_pred             CCCEECCCCCCeeCChHHHHHHH-HhhCCCCCccCC
Confidence            55666666666666666666666 566666666664

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.8e-10  Score=63.09  Aligned_cols=35  Identities=29%  Similarity=0.543  Sum_probs=21.8

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      +++|+|+.|++.|...++|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2eom_A           10 ERGHRCSDCGKFFLQASNFIQHR-RIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCSSSCCCCSSHHHHHHHH-HHHSSCCCSSCC
T ss_pred             CCCcCCCCCCCeeCChHHHHHHH-HHhCCCCCCCCC
Confidence            45666666666666666666665 556666666664

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.9e-10  Score=63.00  Aligned_cols=43  Identities=19%  Similarity=0.360  Sum_probs=38.6

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      |+++|++++||.|++|++.|.....|.+|++ .|.+ +++|+|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQR-VHSG-EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGG-GSCC-SCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhCC-CCCCCCCC
Confidence            5678999999999999999999999999998 6777 78999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=9.5e-11  Score=62.50  Aligned_cols=38  Identities=18%  Similarity=0.378  Sum_probs=28.3

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|
T Consensus         4 ~h~~-~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSG-QRVYECQECGKSFRQKGSLTLHE-RIHTGSGPSSG   41 (41)
T ss_dssp             SCCC-CCCEECSSSCCEESSHHHHHHHG-GGCCCCSCSCC
T ss_pred             ccCC-CCCeECCCCCCCcCCHHHHHHHH-HHhCCCCCcCC
Confidence            3445 66777888888888888888887 67778888776

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.5e-10  Score=63.46  Aligned_cols=41  Identities=20%  Similarity=0.447  Sum_probs=37.2

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|++|++.|...++|..|+ +.|.+++||.|.-|
T Consensus         6 ~h~~-~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTG-EKPYKCDVCHKSFRYGSSLTVHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTT-CCSEECSSSCCEESSHHHHHHHH-TTTSSSCCCSCCCC
T ss_pred             CCCC-CCCeeCcccCcccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            4555 78999999999999999999998 89999999999865

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=2.8e-11  Score=65.00  Aligned_cols=41  Identities=20%  Similarity=0.418  Sum_probs=36.9

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      |+++|++++||.|++|+++|.+.+.|.+|++ .|.+ +++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-IHTG-SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTH-HHHS-CCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHH-HcCC-CCCCCC
Confidence            6778999999999999999999999999998 5666 678887

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=2.8e-10  Score=66.19  Aligned_cols=36  Identities=28%  Similarity=0.451  Sum_probs=25.4

Q ss_pred             CCCccCcc--hhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPY--CITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      ++||+|+.  |++.|+..++|+.|++++|++++||.|.
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            56777754  7777777777777765677777777664

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.3e-11  Score=66.09  Aligned_cols=39  Identities=23%  Similarity=0.432  Sum_probs=25.8

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      .|.+ +++|.|++|++.|...++|..|+ +.|.+++||.|.
T Consensus         6 ~H~~-~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2eox_A            6 SGTD-SKSYNCNECGKAFTRIFHLTRHQ-KIHTRKSGPSSG   44 (44)
T ss_dssp             CCCC-CCCEEETTTTEEESSSHHHHTTH-HHHCCCCCCSCC
T ss_pred             CCCC-CCCeECcccCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            3444 56677777777777777777776 566777777663

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=6.9e-11  Score=64.79  Aligned_cols=35  Identities=26%  Similarity=0.395  Sum_probs=22.1

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCC-CCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLG-KEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~c~  252 (254)
                      +++|.|+.|++.|...++|..|+ +.|.+ ++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~~C~   45 (46)
T 2eoy_A           10 EKCFKCNKCEKTFSCSKYLTQHE-RIHTRGVKSGPSS   45 (46)
T ss_dssp             SCCEECSSSCCEESSSHHHHHHH-TTCCSCCTTSSSC
T ss_pred             CCCEECcCCCCcCCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            45666666666666666666665 56666 6666664

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=6.1e-11  Score=65.03  Aligned_cols=45  Identities=20%  Similarity=0.370  Sum_probs=38.4

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      .|+++|++++||.|++|+++|...+.|.+|++ .|.+.+++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHER-IHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            36788999999999999999999999999998 5554257899963

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.2e-11  Score=63.83  Aligned_cols=37  Identities=24%  Similarity=0.362  Sum_probs=23.3

Q ss_pred             hcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        213 HNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       213 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      |.+ +++|.|++|++.|...+.|..|+ +.|.+++||.|
T Consensus         7 H~~-~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~~   43 (44)
T 2epv_A            7 GSG-EKPYECNECGKAFIWKSLLIVHE-RTHAGVSGPSS   43 (44)
T ss_dssp             CCC-CCSEECSSSCCEESSHHHHHHHH-GGGSSCSCCCC
T ss_pred             cCC-CcCeECCCCCcccCchHHHHHHH-hHhcCCCCCCC
Confidence            444 45666666666666666666666 56666666665

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=62.82  Aligned_cols=35  Identities=23%  Similarity=0.548  Sum_probs=21.3

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      +++|+|+.|++.|....+|..|+ +.|.+++||.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~   44 (45)
T 2epu_A           10 QKPFECTHCGKSFRAKGNLVTHQ-RIHTGEKSGPSS   44 (45)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHH-TTTSSCCCCCSC
T ss_pred             CcCccCCCCCCccCChHHHHHHH-HHhCCCCCCCCC
Confidence            45566666666666666666665 556666666654

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.99  E-value=3.8e-10  Score=60.79  Aligned_cols=39  Identities=23%  Similarity=0.397  Sum_probs=24.4

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      +|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTL-QTHS-DKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHH-HHTC-TTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHH-hhCC-CCCccCC
Confidence            4556666666666666666666666665 3444 4566664

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.7e-11  Score=74.78  Aligned_cols=66  Identities=23%  Similarity=0.264  Sum_probs=52.5

Q ss_pred             HHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        176 TLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       176 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      .|..|+.++.+++||.|+.|++.| ..+.|..|.  .+.+ .++|.|+.|++.|. ...|..|+ .+|++++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~--~~c~-~~~~~C~~C~~~~~-~~~l~~H~-~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE--DYCG-ARTELCGNCGRNVL-VKDLKTHP-EVCGREG   69 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH--HHHH-HCEEECSSSCCEEE-TTGGGTHH-HHBTTBS
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH--hHcC-CCceEcccCCCcCc-HHHHHHHH-HHccCCc
Confidence            455777788888999999999988 488888887  3555 67888999988877 58888898 7787764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.2e-10  Score=62.09  Aligned_cols=40  Identities=15%  Similarity=0.353  Sum_probs=28.0

Q ss_pred             hHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        182 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       182 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      ++|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRR-IHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHH-HHSS-CCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHH-HhCC-CCCCCCC
Confidence            45667777777777777777777777776 4555 5677775

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=63.62  Aligned_cols=41  Identities=20%  Similarity=0.352  Sum_probs=29.2

Q ss_pred             hHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcc
Q psy12195        182 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  224 (254)
Q Consensus       182 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~  224 (254)
                      ++|++++||.|++|++.|.....|.+|++ .|.+ +++|.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQR-IHTG-EKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHT-TTSS-CCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHH-HhCC-CCCCCCCC
Confidence            45677777777777777777777777776 4555 56777763

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.9e-11  Score=64.73  Aligned_cols=42  Identities=33%  Similarity=0.546  Sum_probs=32.4

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      .|+++|++++||.|++|+++|...+.|.+|++ .|.+ +++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~-~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQK-IHTR-KSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHH-HHCC-CCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHH-HhCC-CCCCCC
Confidence            35677888888888888888888888888887 4555 567777

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=63.98  Aligned_cols=41  Identities=24%  Similarity=0.434  Sum_probs=17.6

Q ss_pred             HhhCCCcccCC--CCcccCCCHHHHHHHHHHhhcCCCCCccCcch
Q psy12195        183 MEHNSKSYQCN--ECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  225 (254)
Q Consensus       183 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C  225 (254)
                      +|++++||.|.  +|++.|...+.|.+|++ .|.+ +++|+|+.|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSG-VKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHT-TSCC-CCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHH-HhCC-CCCCCCCCC
Confidence            34444444443  44444444444444443 2333 334444433

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=62.47  Aligned_cols=42  Identities=26%  Similarity=0.388  Sum_probs=33.0

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      .|+++|++++||.|++|++.|...+.|.+|++ .|.+ +++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~-~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER-THAG-VSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHG-GGSS-CSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHh-HhcC-CCCCCC
Confidence            36677888888888888888888888888887 5666 567766

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.93  E-value=6.1e-10  Score=58.54  Aligned_cols=34  Identities=21%  Similarity=0.474  Sum_probs=27.8

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      +++|.|+.|++.|...++|..|+ +.|.+++||.+
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~~   37 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHM-NVHRRDRARLR   37 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHH-HTTCCSCTTTT
T ss_pred             CCceECCCCCcccCCHHHHHHHH-HHcCCCcccee
Confidence            56788888888888888888887 77888888875

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.91  E-value=9.5e-10  Score=55.46  Aligned_cols=32  Identities=25%  Similarity=0.468  Sum_probs=27.5

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  250 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  250 (254)
                      ++|.|++|++.|+..++|..|+ +.|+|++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHI-TLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHH-HHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHH-HHhCCCCCCC
Confidence            4788999999999999999998 7888998885

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=5.6e-10  Score=59.40  Aligned_cols=38  Identities=24%  Similarity=0.441  Sum_probs=25.6

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      +|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHER-IHTG-SGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGG-GCCC-CSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHH-HhCC-CCCcCC
Confidence            4566777777777777777777777766 4555 566665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=60.37  Aligned_cols=41  Identities=22%  Similarity=0.374  Sum_probs=37.1

Q ss_pred             hhcCCCCCccCc--chhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCP--YCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|.  .|++.|...+.|..|+ +.|.+++||.|..|
T Consensus         6 ~H~~-~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTG-EKPFACTWPGCGWRFSRSDELSRHR-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCC-CCCEECCSSSCCCEESSHHHHHHHH-TTSCCCCSCSSCCC
T ss_pred             CcCC-CCCeECCCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4556 7899998  8999999999999999 88999999999876

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=8.1e-11  Score=73.94  Aligned_cols=58  Identities=21%  Similarity=0.308  Sum_probs=35.0

Q ss_pred             HhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCC
Q psy12195        181 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       181 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      ..+|++++||.|++|++.|...+.|.+|++ .|.+ +++|+|..|.    ....|..|. +.|.|
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~-ekp~~C~~~~----~~~~~~~~~-~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLN-IHNE-EFQKRAKRQE----RRKQLLSKQ-KYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHH-HHHH-HHHHHCCCCS----CCCCCCCCC-CCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHH-HhCC-CCCcccchhh----hHHHHHhhh-ccccc
Confidence            345666777777777777777777777766 4544 5567665543    344444554 45555

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=6.7e-09  Score=60.43  Aligned_cols=36  Identities=19%  Similarity=0.301  Sum_probs=16.9

Q ss_pred             CCCcccCCC--CcccCCCHHHHHHHHHHhhcCCCCCccC
Q psy12195        186 NSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQC  222 (254)
Q Consensus       186 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C  222 (254)
                      +++||.|+.  |+++|...+.|.+|++..|++ ++||.|
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg-EKP~~~   61 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS-DLPAFS   61 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS-CCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCC-CCCccc
Confidence            445555532  555555555555554334444 444444

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.75  E-value=9.1e-09  Score=51.71  Aligned_cols=31  Identities=32%  Similarity=0.676  Sum_probs=19.9

Q ss_pred             ccccCCCcccCCChHHHHHHHhHhhCCCccc
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQ  191 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  191 (254)
                      ||.|+.|++.|.....|..|+.+|++++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5666666666666666666666666666653

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.74  E-value=2.9e-09  Score=62.22  Aligned_cols=52  Identities=21%  Similarity=0.426  Sum_probs=42.6

Q ss_pred             hhhhhcceeeeecccccccCCCHHHHHhhhcccccCcceeecCcCCcccCCCCccc
Q psy12195          6 QHLEEHKVVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDEILP   61 (254)
Q Consensus         6 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~   61 (254)
                      |.+.|.++++|.|+.|++.|.....|.   +. |.++++|.|..|++.|.....+.
T Consensus         5 h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~-H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            5 DERDSTNRASFKCPVCSSTFTDLEANQ---LF-DPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CSSSCCSSSEEECSSSCCEEEHHHHHH---HE-ETTTTEEBCSSSCCBCEECTTCS
T ss_pred             HHHHcCCCCCccCCCCCchhccHHHhH---hh-cCCCCCEECCCCCCccccCcccc
Confidence            334467899999999999999888886   55 88889999999999998776654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.74  E-value=3.9e-09  Score=54.62  Aligned_cols=31  Identities=29%  Similarity=0.592  Sum_probs=20.4

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      |+++|++++||.|++|++.|...+.|.+|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~   32 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHH
Confidence            4556666666666666666666666666665

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.74  E-value=4.6e-09  Score=53.55  Aligned_cols=31  Identities=23%  Similarity=0.412  Sum_probs=19.1

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      +++|.|+.|++.|...++|..|+ +.|.+++|
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~kp   35 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHI-REVHGAAQ   35 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHH-HHTSCTTC
T ss_pred             CCCeECCCCcchhCCHHHHHHHH-HHHcCCCC
Confidence            45666666666666666666666 55666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.72  E-value=4.2e-09  Score=53.77  Aligned_cols=25  Identities=20%  Similarity=0.493  Sum_probs=13.6

Q ss_pred             hCCCcccCCCCcccCCCHHHHHHHH
Q psy12195        185 HNSKSYQCNECPESFERLNKLKRHK  209 (254)
Q Consensus       185 ~~~~~~~C~~C~~~f~~~~~l~~H~  209 (254)
                      .+++||.|++||++|.+.+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455555555555555555555554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.72  E-value=1e-08  Score=53.71  Aligned_cols=35  Identities=23%  Similarity=0.389  Sum_probs=19.8

Q ss_pred             hCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCcc
Q psy12195        185 HNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQ  221 (254)
Q Consensus       185 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~  221 (254)
                      ++++||.|++||+.|...+.|..|++ .|.+ +++|.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~-~k~~~   36 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMN-VHRR-DRARL   36 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHH-TTCC-SCTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHH-HcCC-Cccce
Confidence            45556666666666666666666655 3444 44544

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=6.4e-09  Score=53.77  Aligned_cols=31  Identities=29%  Similarity=0.538  Sum_probs=18.6

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      +++|.|+.|++.|...++|..|+ +.|.+++|
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~-~~h~~~kp   37 (37)
T 2elo_A            7 GRSYSCPVCEKSFSEDRLIKSHI-KTNHPEVS   37 (37)
T ss_dssp             CCCCEETTTTEECSSHHHHHHHH-HHHCSSCC
T ss_pred             CCCcCCCCCCCccCCHHHHHHHH-HHHcCCCC
Confidence            45566666666666666666665 55555554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.68  E-value=9.2e-09  Score=52.41  Aligned_cols=31  Identities=23%  Similarity=0.537  Sum_probs=17.7

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      +++|+|+.|++.|...++|..|+ +.|.+++|
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~   35 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHL-KVHTDTLS   35 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHH-GGGTSCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHH-HHcCCCCC
Confidence            45556666666666666666665 55555543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.64  E-value=1.2e-08  Score=53.02  Aligned_cols=33  Identities=18%  Similarity=0.233  Sum_probs=23.9

Q ss_pred             CCCccCc--chhhccCCchHHHHHHHHhcCCCCCCC
Q psy12195        217 VHQIQCP--YCITDFSEDKNLIQHIVSVHLGKEGTA  250 (254)
Q Consensus       217 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~  250 (254)
                      +++|.|+  .|++.|...++|..|+ +.|++++||.
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~   38 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHK-HKHEMTLKFG   38 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHH-HHHHTTTTTC
T ss_pred             CcceECCCCCCCcccCCHHHHHHHH-HHhCCCCCCC
Confidence            5677777  4777777777777777 6677777763

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.1e-08  Score=52.81  Aligned_cols=33  Identities=24%  Similarity=0.454  Sum_probs=24.8

Q ss_pred             hHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        182 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       182 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      ++|++++||.|++|+++|...+.|.+|++. |.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKT-NHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHH-HCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHH-HcC
Confidence            457778888888888888888888888773 444

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.64  E-value=8.6e-10  Score=55.18  Aligned_cols=32  Identities=22%  Similarity=0.390  Sum_probs=27.9

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  250 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  250 (254)
                      ++|+|+.|++.|...++|..|+ +.|++++||.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHI-KTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSST-TSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHH-HHHccCCCCC
Confidence            4788999999999999999998 8899999874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.4e-08  Score=52.58  Aligned_cols=29  Identities=24%  Similarity=0.439  Sum_probs=15.4

Q ss_pred             CCCccCcc--hhhccCCchHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPY--CITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      ++||+|++  |++.|+.+++|..|+ +.|+|+
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~-r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHL-KVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHH-HHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence            44555554  555555555555555 455544

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.60  E-value=1.4e-08  Score=52.45  Aligned_cols=33  Identities=27%  Similarity=0.508  Sum_probs=29.3

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .|.+ +++|+|+.|++.|...++|..|+ +.|.|+
T Consensus         5 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   37 (37)
T 1p7a_A            5 GSTG-IKPFQCPDCDRSFSRSDHLALHR-KRHMLV   37 (37)
T ss_dssp             TTCC-SSSBCCTTTCCCBSSHHHHHHHH-GGGTCC
T ss_pred             cCCC-CCCccCCCCCcccCcHHHHHHHH-HHhccC
Confidence            4666 78999999999999999999998 888875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.60  E-value=9.6e-09  Score=52.40  Aligned_cols=29  Identities=21%  Similarity=0.238  Sum_probs=26.2

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPAR  253 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~  253 (254)
                      +++|+|+.|++.|+++++|.+|+        ||.|+.
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~--------py~C~~   34 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ--------AYYCSH   34 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH--------HHTSTT
T ss_pred             ccCeECCCCCCccCCHhHccCcC--------CeECcC
Confidence            78999999999999999999998        777753

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.5e-09  Score=66.02  Aligned_cols=62  Identities=16%  Similarity=0.277  Sum_probs=49.6

Q ss_pred             HHHHHH-hcCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        150 LVTHIS-QTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       150 l~~h~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      |..|+. ....+++.|+.|+..|. ...|..|+ .+.+++||.|+.|++.|. ...|..|+. .+.+
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~-~c~~   67 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPE-VCGR   67 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHH-HBTT
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHH-HccC
Confidence            344543 34458999999999995 88999999 899999999999999887 589999987 4554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.58  E-value=3.3e-08  Score=50.20  Aligned_cols=31  Identities=23%  Similarity=0.423  Sum_probs=23.3

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      |++++||.|++|+++|.+.+.|.+|++. |.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~   32 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIRE-VHG   32 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHH-TSC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHH-HcC
Confidence            5677888888888888888888888773 443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.56  E-value=3.7e-08  Score=50.05  Aligned_cols=31  Identities=23%  Similarity=0.502  Sum_probs=22.8

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      |++++||.|++|++.|...+.|.+|++ .|.+
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   32 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTS
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHH-HcCC
Confidence            567778888888888888888888876 3443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=1.9e-08  Score=51.99  Aligned_cols=26  Identities=35%  Similarity=0.496  Sum_probs=17.0

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHH
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRH  208 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H  208 (254)
                      +|++++||.|++|+++|...+.|.+|
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H   28 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRH   28 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHH
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHH
Confidence            45666666666666666666666666

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=5.3e-08  Score=49.79  Aligned_cols=29  Identities=21%  Similarity=0.350  Sum_probs=16.6

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .++|.|+.|++.|...++|..|+ +.|+++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~-~~H~~e   35 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHK-LLHTAD   35 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHH-HHHSSC
T ss_pred             CCCeecCcCCCCcCchHHHHHHH-HHhcCC
Confidence            45556666666666666666665 455554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=3.1e-08  Score=50.75  Aligned_cols=29  Identities=24%  Similarity=0.383  Sum_probs=15.7

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .++|+|++|++.|...++|..|+ +.|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHM-LVHGDK   35 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHH-TTTSTT
T ss_pred             CCCeECCCCCCccCCHHHHHHHH-HHhcCC
Confidence            44555555555555555555555 445544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=3.9e-08  Score=50.31  Aligned_cols=29  Identities=28%  Similarity=0.477  Sum_probs=13.9

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .++|+|+.|++.|...++|..|+ +.|.++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHL-RKHTGE   35 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHH-HHHTCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHH-HHccCC
Confidence            34455555555555555555554 344443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=4.2e-08  Score=50.20  Aligned_cols=29  Identities=21%  Similarity=0.385  Sum_probs=14.4

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .++|+|++|++.|...++|..|+ +.|.++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHM-NRHSTE   35 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHH-HHSSTT
T ss_pred             CCCccCCCCCchhCCHHHHHHHH-HHhccC
Confidence            34455555555555555555554 444443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=5.4e-09  Score=65.56  Aligned_cols=41  Identities=17%  Similarity=0.316  Sum_probs=37.1

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART  254 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~~~  254 (254)
                      .|.+ +++|+|++|++.|...++|..|+ +.|++++||.|.++
T Consensus        19 ~H~~-~kpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~~   59 (88)
T 1x6f_A           19 PRLQ-NSTYQCKHCDSKLQSTAELTSHL-NIHNEEFQKRAKRQ   59 (88)
T ss_dssp             SCCC-CSCEECSSSCCEESSHHHHHHHH-HHHHHHHHHHCCCC
T ss_pred             ccCC-CCCCcCCCCCCEeCCHHHHHHHH-HHhCCCCCcccchh
Confidence            4566 78999999999999999999999 88999999999874

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.52  E-value=3.6e-08  Score=54.21  Aligned_cols=33  Identities=24%  Similarity=0.463  Sum_probs=20.0

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +|++++||.|.+|+++|.....|.+|++..|.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            355666666666666666666666666533443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.52  E-value=5.3e-08  Score=53.50  Aligned_cols=35  Identities=20%  Similarity=0.388  Sum_probs=25.1

Q ss_pred             hcCCCCCccCcchhhccCCchHHHHHHHHhcCCCCC
Q psy12195        213 HNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       213 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      |.+ +++|.|.+|++.|....+|..|++..|.++.+
T Consensus         2 Ht~-~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDR-DKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTT-TSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCC-CcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            445 67888888888888888888888437877754

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.50  E-value=7.4e-08  Score=46.48  Aligned_cols=27  Identities=22%  Similarity=0.564  Sum_probs=17.0

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      +|.|+.|++.|...+.|..|+ +.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHY-RSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHH-HHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHH-HHhcCC
Confidence            466666666666666666666 455554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=5.6e-08  Score=49.73  Aligned_cols=29  Identities=24%  Similarity=0.532  Sum_probs=16.1

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .++|+|+.|++.|...+.|..|+ +.|.++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~   35 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHL-RIHTNE   35 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-HHHCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHH-HHhCCC
Confidence            44555555555555555555555 445544

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.8e-08  Score=50.75  Aligned_cols=29  Identities=34%  Similarity=0.695  Sum_probs=15.9

Q ss_pred             CCCccCcchhhccCCc-hHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPYCITDFSED-KNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~-~~l~~H~~~~h~~~  246 (254)
                      +++|+|+.|++.|... ++|..|+ +.|+++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~-~~H~~~   36 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHI-WAHEGV   36 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHH-HHHHTC
T ss_pred             CCCeECCCCChhhccCHHHHHHHH-HhcCCC
Confidence            4455555555555555 5555555 445444

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=8.2e-08  Score=49.64  Aligned_cols=31  Identities=23%  Similarity=0.291  Sum_probs=22.6

Q ss_pred             hhCCCcccCCC--CcccCCCHHHHHHHHHHhhcC
Q psy12195        184 EHNSKSYQCNE--CPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       184 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +++++||.|++  |+++|...+.|.+|++ .|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r-~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLK-VHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHH-HHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCC
Confidence            46777888875  8888888888888877 4443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.49  E-value=4.8e-08  Score=47.19  Aligned_cols=29  Identities=31%  Similarity=0.608  Sum_probs=19.9

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      ++|.|+.|++.|...+.|..|+ +.|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHI-LLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHH-TGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHH-HHhcCCC
Confidence            3567777777777777777776 5666653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.48  E-value=9.8e-08  Score=46.38  Aligned_cols=29  Identities=34%  Similarity=0.571  Sum_probs=19.6

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      +|.|+.|++.|...++|..|+ +.|.++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~h~~~~~   30 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHI-KTKHSKEK   30 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHH-HHHTSSCC
T ss_pred             CccCCCCCCccCCHHHHHHHH-HHHccCCC
Confidence            567777777777777777776 55555543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.46  E-value=7.8e-08  Score=46.82  Aligned_cols=29  Identities=28%  Similarity=0.552  Sum_probs=20.9

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      +|.|+.|++.|.+.+.|..|+.+.|.+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            57777777777777777777446777653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=8.8e-08  Score=46.54  Aligned_cols=28  Identities=29%  Similarity=0.629  Sum_probs=16.4

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      ++|.|+.|++.|.....|..|+ +.|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~-~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHL-ETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHH-HHhccC
Confidence            3556666666666666666665 455554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.42  E-value=1.3e-07  Score=46.52  Aligned_cols=28  Identities=29%  Similarity=0.688  Sum_probs=18.7

Q ss_pred             CccCc--chhhccCCchHHHHHHHHhcCCCC
Q psy12195        219 QIQCP--YCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       219 ~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      +|.|+  .|++.|...++|..|+ +.|+|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHK-RTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHH-TTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHH-HHhcCCC
Confidence            56675  6777777777777776 6666653

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.5e-07  Score=48.07  Aligned_cols=32  Identities=22%  Similarity=0.390  Sum_probs=24.6

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +|++++||.|++|++.|...+.|.+|++ .|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLR-KHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHH-HHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHH-HccC
Confidence            4677888888888888888888888887 4443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.42  E-value=1.1e-07  Score=45.80  Aligned_cols=27  Identities=30%  Similarity=0.730  Sum_probs=17.8

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      +|.|+.|++.|...++|..|+ +.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~-~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHL-KIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHH-HHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHH-HHhccC
Confidence            566777777777777777776 555554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=1.9e-07  Score=48.29  Aligned_cols=26  Identities=27%  Similarity=0.643  Sum_probs=15.2

Q ss_pred             hCCCcccCC--CCcccCCCHHHHHHHHH
Q psy12195        185 HNSKSYQCN--ECPESFERLNKLKRHKF  210 (254)
Q Consensus       185 ~~~~~~~C~--~C~~~f~~~~~l~~H~~  210 (254)
                      ++++||.|+  .|+++|...+.|.+|++
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~   29 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKH   29 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHH
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHH
Confidence            455566666  36666666666666655

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.5e-07  Score=48.07  Aligned_cols=32  Identities=22%  Similarity=0.419  Sum_probs=25.0

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +|++++||.|++|++.|...+.|.+|++ .|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMN-RHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHH-HSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHH-Hhcc
Confidence            4677888888888888888888888887 4443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.76  E-value=3.5e-08  Score=47.75  Aligned_cols=28  Identities=32%  Similarity=0.685  Sum_probs=19.6

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      +|+|+.|++.|...++|..|+ +.|.+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHV-RQHTGEK   29 (29)
Confidence            577777777777777777777 5666653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=2.8e-07  Score=46.96  Aligned_cols=28  Identities=29%  Similarity=0.561  Sum_probs=21.0

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      |++++||.|++|++.|.....|.+|++.
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHH
Confidence            5667777777777777777777777763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.39  E-value=2.3e-07  Score=45.90  Aligned_cols=29  Identities=28%  Similarity=0.517  Sum_probs=19.8

Q ss_pred             CCccCc--chhhccCCchHHHHHHHHhcCCCC
Q psy12195        218 HQIQCP--YCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       218 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      ++|.|+  .|++.|...+.|..|+ +.|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHH-HHccCCC
Confidence            467776  6777777777777776 6666653

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=9.9e-08  Score=45.97  Aligned_cols=27  Identities=30%  Similarity=0.721  Sum_probs=16.2

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      +|.|+.|++.|....+|..|+ +.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~-~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHL-RIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHH-HHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHH-HHhcCC
Confidence            456666666666666666665 455554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.2e-07  Score=48.76  Aligned_cols=29  Identities=21%  Similarity=0.466  Sum_probs=22.6

Q ss_pred             HhhCCCcccCCCCcccCCCH-HHHHHHHHH
Q psy12195        183 MEHNSKSYQCNECPESFERL-NKLKRHKFQ  211 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~  211 (254)
                      +|++++||.|++|++.|... +.|.+|++.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHh
Confidence            56777888888888888887 888888773

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1.4e-07  Score=48.20  Aligned_cols=32  Identities=25%  Similarity=0.510  Sum_probs=24.0

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      .|++++||.|++|++.|...+.|.+|++ .|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHML-VHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHT-TTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHH-HhcC
Confidence            4667788888888888888888888877 4443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.1e-07  Score=48.93  Aligned_cols=34  Identities=18%  Similarity=0.286  Sum_probs=29.1

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .|.+ +++|+|+.|++.|...++|..|+.+.|+++
T Consensus         3 ~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSS-GHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSS-SCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCC-CcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3566 789999999999999999999933888875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.35  E-value=1.5e-07  Score=48.48  Aligned_cols=29  Identities=24%  Similarity=0.453  Sum_probs=13.7

Q ss_pred             CCCccCcc--hhhccCCchHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPY--CITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .++|.|++  |++.|...+.|..|+ +.|+|+
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~e   36 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHL-RWHTGE   36 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHH-HHHHTT
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHH-HhcCCC
Confidence            34455542  555555555555554 344443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.35  E-value=1.1e-08  Score=50.94  Aligned_cols=30  Identities=37%  Similarity=0.723  Sum_probs=18.2

Q ss_pred             ccccCCCcccCCChHHHHHHHhHhhCCCcc
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKMEHNSKSY  190 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  190 (254)
                      ||.|+.|++.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            556666666666666666666666666554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=5.7e-08  Score=47.31  Aligned_cols=28  Identities=25%  Similarity=0.619  Sum_probs=19.0

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      ++|.|+.|++.|...++|..|+ +.|.++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHV-RIHTGE   29 (30)
Confidence            4567777777777777777776 556554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.7e-07  Score=46.51  Aligned_cols=31  Identities=23%  Similarity=0.485  Sum_probs=22.9

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      |++++||.|++|++.|.....|..|++ .|.+
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLR-IHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHH-HHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHH-HhCC
Confidence            566778888888888888888888877 3443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.33  E-value=5.1e-07  Score=43.34  Aligned_cols=22  Identities=41%  Similarity=0.812  Sum_probs=13.3

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|++|+++|...+.|..|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            5566666666666666666655

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.33  E-value=2.1e-07  Score=44.00  Aligned_cols=25  Identities=32%  Similarity=0.600  Sum_probs=14.7

Q ss_pred             ccCcchhhccCCchHHHHHHHHhcCC
Q psy12195        220 IQCPYCITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      |+|+.|++.|...+.|..|+ +.|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~-~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQ-RVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG-GGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHH-HHcCC
Confidence            55666666666666666665 45544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.31  E-value=2e-07  Score=44.51  Aligned_cols=21  Identities=24%  Similarity=0.485  Sum_probs=10.5

Q ss_pred             CccCcchhhccCCchHHHHHH
Q psy12195        219 QIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      +|.|+.|++.|...+.|..|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~   23 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHY   23 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHH
T ss_pred             CccCCCCCcccCCHHHHHHHH
Confidence            444555555555555555554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.29  E-value=6.2e-07  Score=43.35  Aligned_cols=22  Identities=32%  Similarity=0.493  Sum_probs=12.4

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|++|++.|...+.|..|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHH
T ss_pred             CccCCCCCCccCCHHHHHHHHH
Confidence            4555555555555555555555

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=4.9e-07  Score=43.37  Aligned_cols=22  Identities=36%  Similarity=0.712  Sum_probs=11.0

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|++|++.|.....|..|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLR   23 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHH
Confidence            4445555555555555555544

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.29  E-value=3.9e-07  Score=43.80  Aligned_cols=22  Identities=36%  Similarity=0.871  Sum_probs=11.5

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|++|++.|...+.|..|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHIL   23 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHT
T ss_pred             CccCCCCCchhCCHHHHHHHHH
Confidence            4555555555555555555554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.28  E-value=6.3e-07  Score=42.93  Aligned_cols=22  Identities=27%  Similarity=0.640  Sum_probs=11.1

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|++|+++|...+.|..|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLK   23 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHH
Confidence            4455555555555555555544

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.27  E-value=2.1e-07  Score=44.13  Aligned_cols=21  Identities=19%  Similarity=0.556  Sum_probs=10.4

Q ss_pred             CccCcchhhccCCchHHHHHH
Q psy12195        219 QIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      +|+|+.|++.|...++|..|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~   23 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHM   23 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHH
T ss_pred             CcCCCCCCcccCCHHHHHHHH
Confidence            444555555555555555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.26  E-value=3.5e-07  Score=43.25  Aligned_cols=23  Identities=22%  Similarity=0.655  Sum_probs=11.8

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +||.|++||++|...+.|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLR   24 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHH
Confidence            44555555555555555555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.25  E-value=5.6e-07  Score=42.48  Aligned_cols=25  Identities=16%  Similarity=0.473  Sum_probs=17.5

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhc
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      ++|.|+.|++.|...+.|..|+ +.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~-~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHL-RTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH-HHC
T ss_pred             cCccCCCcChhhCCHHHHHHHH-HHc
Confidence            4677777777777777777776 444

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=5.5e-07  Score=43.56  Aligned_cols=23  Identities=39%  Similarity=0.638  Sum_probs=15.5

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +||.|++|++.|.....|..|++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~   24 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLE   24 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHHHH
Confidence            56666666666666666666665

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=1e-06  Score=51.54  Aligned_cols=28  Identities=25%  Similarity=0.520  Sum_probs=20.6

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      +.+++||.|.+|+++|.+.+.|.+|++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~   35 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQ   35 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHH
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhh
Confidence            4567777777777777777777777774

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=7.4e-07  Score=52.17  Aligned_cols=31  Identities=23%  Similarity=0.291  Sum_probs=28.2

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      +++|+|..|++.|...++|..|+ +.|+++..
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~-r~Htg~~~   41 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHE-AQHGVTSL   41 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHH-HHHTTTSC
T ss_pred             ccCcCCCCCCCccCCHHHHHhhh-hhhCCCcc
Confidence            78999999999999999999999 77888753

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.23  E-value=8.3e-07  Score=43.44  Aligned_cols=22  Identities=36%  Similarity=0.815  Sum_probs=12.2

Q ss_pred             cccCC--CCcccCCCHHHHHHHHH
Q psy12195        189 SYQCN--ECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~--~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|+  +||++|...+.|.+|++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~   25 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKR   25 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHT
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHH
Confidence            45554  55555555555555554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.22  E-value=6.3e-07  Score=46.00  Aligned_cols=28  Identities=18%  Similarity=0.355  Sum_probs=19.5

Q ss_pred             hhCCCcccCCC--CcccCCCHHHHHHHHHH
Q psy12195        184 EHNSKSYQCNE--CPESFERLNKLKRHKFQ  211 (254)
Q Consensus       184 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~  211 (254)
                      |++++||.|.+  |+++|...+.|.+|++.
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            45667777763  77777777777777763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.22  E-value=1e-06  Score=43.47  Aligned_cols=23  Identities=39%  Similarity=0.842  Sum_probs=12.8

Q ss_pred             CcccCC--CCcccCCCHHHHHHHHH
Q psy12195        188 KSYQCN--ECPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~--~C~~~f~~~~~l~~H~~  210 (254)
                      +||.|+  .|+++|...+.|.+|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~   26 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHH
Confidence            455555  55555555555555554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=7.9e-07  Score=42.31  Aligned_cols=24  Identities=21%  Similarity=0.573  Sum_probs=17.1

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHH
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ++||.|++|+++|...+.|..|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~   24 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYR   24 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHT
T ss_pred             CcCccCCCCCcccCCHHHHHHHHH
Confidence            356777777777777777777765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.20  E-value=5.5e-07  Score=42.57  Aligned_cols=24  Identities=21%  Similarity=0.509  Sum_probs=17.4

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHH
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ++||.|++||++|...+.|.+|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMR   24 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHT
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHH
Confidence            357777777777777777777765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.19  E-value=9.6e-07  Score=41.55  Aligned_cols=22  Identities=36%  Similarity=0.751  Sum_probs=11.3

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|++|++.|.+.+.|.+|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~   22 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQR   22 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGG
T ss_pred             CccCCCCCCcCCCHHHHHHHHH
Confidence            3455555555555555555554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.19  E-value=7.9e-08  Score=52.52  Aligned_cols=28  Identities=25%  Similarity=0.604  Sum_probs=13.1

Q ss_pred             HhhCCCcccCC--CCcccCCCHHHHHHHHH
Q psy12195        183 MEHNSKSYQCN--ECPESFERLNKLKRHKF  210 (254)
Q Consensus       183 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~  210 (254)
                      +|++++||.|+  .|+++|...+.|.+|++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~   41 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHH
Confidence            34444444442  34444444444444444

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.47  E-value=2.3e-07  Score=44.73  Aligned_cols=22  Identities=27%  Similarity=0.496  Sum_probs=12.4

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|++|+++|...+.|..|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVR   23 (29)
Confidence            4555555555555555555554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.17  E-value=4.1e-07  Score=49.60  Aligned_cols=34  Identities=24%  Similarity=0.428  Sum_probs=29.8

Q ss_pred             hhcCCCCCccCc--chhhccCCchHHHHHHHHhcCCCC
Q psy12195        212 AHNDSVHQIQCP--YCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       212 ~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      .|.+ +++|+|+  .|++.|...++|..|+ +.|+|++
T Consensus        12 ~H~~-~k~~~C~~~~C~k~F~~~~~L~~H~-~~H~~ek   47 (47)
T 1ncs_A           12 KEMP-DKTFECLFPGCTKTFKRRYNIRSHI-QTHLEDR   47 (47)
T ss_dssp             EEET-TTEEECCCTTCCCEECSSSSHHHHH-HHHTTTC
T ss_pred             ccCC-CCCeECCCCCCCCccCCHHHHHHHH-HHccCCC
Confidence            4666 7899995  7999999999999999 7898875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.6e-07  Score=43.24  Aligned_cols=21  Identities=29%  Similarity=0.580  Sum_probs=12.9

Q ss_pred             CccCcchhhccCCchHHHHHH
Q psy12195        219 QIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      +|.|+.|++.|...+.|..|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~   22 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHI   22 (26)
Confidence            456666666666666666665

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.40  E-value=3.5e-07  Score=44.37  Aligned_cols=23  Identities=35%  Similarity=0.676  Sum_probs=13.6

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +||.|++|++.|...+.|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~   24 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVR   24 (30)
Confidence            45566666666666666666655

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.08  E-value=1.6e-06  Score=41.93  Aligned_cols=20  Identities=40%  Similarity=0.866  Sum_probs=12.4

Q ss_pred             cccCCCCcccCCCHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRH  208 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H  208 (254)
                      ||.|++|++.|.+.+.|..|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHH
T ss_pred             CcCCcccCcccCChHHHHHH
Confidence            55666666666666666666

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.25  E-value=8.3e-07  Score=41.43  Aligned_cols=23  Identities=30%  Similarity=0.654  Sum_probs=14.5

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +||.|++||++|...+.|..|++
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~   23 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIR   23 (26)
Confidence            35666666666666666666655

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.96  E-value=2.5e-06  Score=40.78  Aligned_cols=25  Identities=24%  Similarity=0.546  Sum_probs=13.1

Q ss_pred             CccCc--chhhccCCchHHHHHHHHhcC
Q psy12195        219 QIQCP--YCITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       219 ~~~C~--~C~~~f~~~~~l~~H~~~~h~  244 (254)
                      +|.|+  .|++.|...++|..|+ +.|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~-~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHK-KIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHH-GGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHH-HHhC
Confidence            34555  5555555555555555 4443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.83  E-value=9e-06  Score=38.68  Aligned_cols=22  Identities=45%  Similarity=0.844  Sum_probs=12.9

Q ss_pred             cccCC--CCcccCCCHHHHHHHHH
Q psy12195        189 SYQCN--ECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~--~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|+  .|++.|...+.|..|++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~   25 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKK   25 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHH
Confidence            45555  56666666666666555

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.72  E-value=5.9e-05  Score=43.76  Aligned_cols=50  Identities=30%  Similarity=0.515  Sum_probs=32.5

Q ss_pred             CCcccCCCHHHHHHHHHHhhcCCC-----CCccCc--chhhccCCchHHHHHHHHhc
Q psy12195        194 ECPESFERLNKLKRHKFQAHNDSV-----HQIQCP--YCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       194 ~C~~~f~~~~~l~~H~~~~h~~~~-----~~~~C~--~C~~~f~~~~~l~~H~~~~h  243 (254)
                      .|++.|.+...|..|+...|.+..     ..|.|.  -|+..+.....|++|++..|
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            467777777777777654554422     267775  57777777777777775544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.61  E-value=0.00012  Score=42.41  Aligned_cols=48  Identities=19%  Similarity=0.344  Sum_probs=37.1

Q ss_pred             CCcccCCChHHHHHHHh-HhhCCC------cccCC--CCcccCCCHHHHHHHHHHhh
Q psy12195        166 RCPSTFLNSATLSKHVK-MEHNSK------SYQCN--ECPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       166 ~C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~h  213 (254)
                      .|++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            47788888888888874 566554      78886  89988888889999988554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=97.26  E-value=0.00017  Score=35.38  Aligned_cols=29  Identities=24%  Similarity=0.581  Sum_probs=21.9

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      .|.||.|.+.|.+...|+.|.+..|..+.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~~   33 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAGN   33 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSSC
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccCC
Confidence            47788888888888888888877776543

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.89  E-value=0.00024  Score=46.59  Aligned_cols=29  Identities=21%  Similarity=0.207  Sum_probs=24.9

Q ss_pred             hHhhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        182 KMEHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       182 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ..++|++||.|..|++.|.+.+.|..|++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            44778899999999999999999999975

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.80  E-value=0.0017  Score=43.29  Aligned_cols=23  Identities=26%  Similarity=0.376  Sum_probs=16.1

Q ss_pred             CCCccCcchhhccCCchHHHHHH
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      ...|.|.+|.+.|++...|..|+
T Consensus        91 ~~~~~C~~C~~~f~s~~~~~~H~  113 (127)
T 1zu1_A           91 DRSKCCPVCNMTFSSPVVAESHY  113 (127)
T ss_dssp             CTTTEETTTTEECSSHHHHHHHH
T ss_pred             CCCeEcCCCCCEeCCHHHHHHHH
Confidence            44566777777777777777775

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.77  E-value=0.0018  Score=43.19  Aligned_cols=50  Identities=16%  Similarity=0.335  Sum_probs=42.5

Q ss_pred             cccccCCCcccCCChHHHHHHHh--Hhh-------------------------------CCCcccCCCCcccCCCHHHHH
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVK--MEH-------------------------------NSKSYQCNECPESFERLNKLK  206 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~--~h~-------------------------------~~~~~~C~~C~~~f~~~~~l~  206 (254)
                      +++.|.+|+..|.+...+..|..  .|.                               +.+.|.|.+|++.|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            68999999999999999999993  331                               235688999999999999999


Q ss_pred             HHH
Q psy12195        207 RHK  209 (254)
Q Consensus       207 ~H~  209 (254)
                      .|+
T Consensus       111 ~H~  113 (127)
T 1zu1_A          111 SHY  113 (127)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            885

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.46  E-value=0.0016  Score=45.92  Aligned_cols=84  Identities=17%  Similarity=0.286  Sum_probs=52.3

Q ss_pred             ccccc--CCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHH
Q psy12195        160 LMFTC--RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQ  237 (254)
Q Consensus       160 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~  237 (254)
                      ....|  ..|+..+. ...+..|.. .-.-++..|+.|+..+ .+..|..|... .-. .+...|+.|+..+.. ..|..
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~-~C~-~r~~~C~~C~~~~~~-~~l~~  154 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILK-DCP-RRQVSCDNCAASMAF-EDKEI  154 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHH-TCT-TCEEECTTTCCEEEG-GGHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhh-hCC-CCCeECCCCCCccCH-HHHHh
Confidence            44556  45666554 445666763 2334677888888877 66778888752 233 456678888877644 56788


Q ss_pred             HHHHhcCCCCCCC
Q psy12195        238 HIVSVHLGKEGTA  250 (254)
Q Consensus       238 H~~~~h~~~~~~~  250 (254)
                      |. ..++|+.++.
T Consensus       155 H~-~~~~~~~~~~  166 (170)
T 3hcs_A          155 HD-QNCPLALEHH  166 (170)
T ss_dssp             HH-TTCCC-----
T ss_pred             HH-HhCcChhhhh
Confidence            87 8888887764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.44  E-value=0.0037  Score=32.73  Aligned_cols=21  Identities=29%  Similarity=0.634  Sum_probs=10.4

Q ss_pred             CccCcchhhccCCchHHHHHH
Q psy12195        219 QIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      +|.||.|+..|...+.|..||
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hm   32 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHM   32 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhh
Confidence            344555555555555555554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=96.24  E-value=0.0048  Score=30.23  Aligned_cols=28  Identities=21%  Similarity=0.515  Sum_probs=23.9

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhhcCC
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAHNDS  216 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  216 (254)
                      .|.||+|.+.|.+...|..|....|..+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4889999999999999999998888763

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.16  E-value=0.0048  Score=32.32  Aligned_cols=23  Identities=22%  Similarity=0.444  Sum_probs=19.9

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      .+|.||.|+..|+....|.+|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            67888889988988888988887

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.44  E-value=0.0058  Score=40.03  Aligned_cols=29  Identities=24%  Similarity=0.395  Sum_probs=26.7

Q ss_pred             hhcceeeeecccccccCCCHHHHHhhhcc
Q psy12195          9 EEHKVVIIRCETCTRNYESLESLTTHLSF   37 (254)
Q Consensus         9 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~   37 (254)
                      .+.|.++|.|..|++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            35689999999999999999999999987

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.37  E-value=0.0055  Score=43.11  Aligned_cols=78  Identities=15%  Similarity=0.404  Sum_probs=51.8

Q ss_pred             ccccc--ccccccCCHHHHHHHHHhcCCcccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        134 SIQCN--MCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       134 ~~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      ...|+  .|+..+. ...+..|...=.-.+..|+.|+..+ ....|..|....-+.++..|+.|+..+ ....|..|.. 
T Consensus        82 ~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~-~~~~l~~H~~-  157 (170)
T 3hcs_A           82 MVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM-AFEDKEIHDQ-  157 (170)
T ss_dssp             EEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE-EGGGHHHHHT-
T ss_pred             ccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc-CHHHHHhHHH-
Confidence            45563  4665544 4456677642223667788888877 566778888777777888888888777 5567777775 


Q ss_pred             hhcC
Q psy12195        212 AHND  215 (254)
Q Consensus       212 ~h~~  215 (254)
                      .+++
T Consensus       158 ~~~~  161 (170)
T 3hcs_A          158 NCPL  161 (170)
T ss_dssp             TCCC
T ss_pred             hCcC
Confidence            4544

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=94.80  E-value=0.016  Score=27.36  Aligned_cols=24  Identities=42%  Similarity=0.848  Sum_probs=18.7

Q ss_pred             cCcchhhccCCchHHHHHHHHhcC
Q psy12195        221 QCPYCITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       221 ~C~~C~~~f~~~~~l~~H~~~~h~  244 (254)
                      .|..|.+.++...+|+.|++..|-
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            378888888888888888876663

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=93.43  E-value=0.066  Score=25.25  Aligned_cols=25  Identities=24%  Similarity=0.598  Sum_probs=20.8

Q ss_pred             ccCCCCcccCCCHHHHHHHHHHhhc
Q psy12195        190 YQCNECPESFERLNKLKRHKFQAHN  214 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~~~h~  214 (254)
                      -.|..|.+.++...+|..|++..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4688899999999999999987664

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.91  E-value=0.042  Score=32.49  Aligned_cols=44  Identities=20%  Similarity=0.409  Sum_probs=33.8

Q ss_pred             eeeeecccccccCCCHHHHHhhhcccccCcceeecCcCCcccCCCC
Q psy12195         13 VVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPRDE   58 (254)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~   58 (254)
                      =..|.|+.|+..+. +..+..|... -.+-..|.|..|++.|...+
T Consensus         8 MV~F~C~~Cgd~lK-K~kv~~H~~~-Cr~~~~~SCIDC~~~F~~~~   51 (79)
T 1wjv_A            8 MVFFTCNACGESVK-KIQVEKHVSN-CRNCECLSCIDCGKDFWGDD   51 (79)
T ss_dssp             CCEEEESSSCCEEE-TTHHHHHHHH-CTTCCEEEETTTTEEEEGGG
T ss_pred             eeEEEcCCCCCeee-cccchhHHhh-CCCCCcEEecccCCeeCCCC
Confidence            46789999998877 6677788765 55555789999999998654

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=91.89  E-value=0.071  Score=24.74  Aligned_cols=21  Identities=24%  Similarity=0.528  Sum_probs=18.0

Q ss_pred             CccCcchhhccCCchHHHHHH
Q psy12195        219 QIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      .|.|++|+....+..+|+.|.
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~   23 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHV   23 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHH
Confidence            478999999999999988887

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=91.44  E-value=0.11  Score=30.55  Aligned_cols=44  Identities=18%  Similarity=0.393  Sum_probs=24.9

Q ss_pred             eeeeecccccccCCCHHHHHhhhccccc---------------CcceeecCcCCcccCCC
Q psy12195         13 VVIIRCETCTRNYESLESLTTHLSFKHS---------------NQFLMKCTNCNVLVPRD   57 (254)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~---------------~~~~~~C~~C~~~~~~~   57 (254)
                      ...-+||.||..........+-... -+               .+..|+|+.||..|.-+
T Consensus         6 ~~~~~~PlCG~~L~W~eLIeQML~~-en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A            6 HHMAKCPICGSPLKWEELIEEMLII-ENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGK   64 (95)
T ss_dssp             --CEECSSSCCEECHHHHHHHSTTC-STHHHHTTCHHHHHHHHHHSEEECTTTCCEEETT
T ss_pred             cccccCCcCCCccCHHHHHHHHHhh-ccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhcc
Confidence            4567888888888766554433332 22               23446777777666544

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=91.02  E-value=0.34  Score=26.13  Aligned_cols=45  Identities=31%  Similarity=0.674  Sum_probs=31.1

Q ss_pred             ccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhh-ccCCchHHHHHH
Q psy12195        190 YQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT-DFSEDKNLIQHI  239 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~-~f~~~~~l~~H~  239 (254)
                      -.|.+|....-+...|..|...--.+     +||+|.. .-++.+.|+.|.
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~g-----qCPYC~~~~e~tesAlQaHf   49 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCING-----QCPYCMTITEATESALQAHY   49 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTTT-----BCTTTCCBCCSSHHHHHHHH
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCCC-----CCCcccCcCCcCHHHHHHHH
Confidence            35777777777777888887643333     3778864 567778888876

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.64  E-value=0.24  Score=24.29  Aligned_cols=23  Identities=26%  Similarity=0.439  Sum_probs=13.8

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      .++.|..|+-+|+...++..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            44556666666666666666654

>1wvk_A AT2G23090/F21P24.15; structural genomics, protein structure initiative, cell free, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: g.82.1.1

Probab=89.70  E-value=0.13  Score=31.02  Aligned_cols=35  Identities=20%  Similarity=0.278  Sum_probs=26.4

Q ss_pred             CCCccCcchhh---ccCCchHHHHHHHHhcCCCCCCCC
Q psy12195        217 VHQIQCPYCIT---DFSEDKNLIQHIVSVHLGKEGTAP  251 (254)
Q Consensus       217 ~~~~~C~~C~~---~f~~~~~l~~H~~~~h~~~~~~~c  251 (254)
                      ...++|++|..   ..++...|..|....|+...+..|
T Consensus        43 A~~i~C~VCr~tFm~t~~~~~L~~H~e~KHpK~~~~eC   80 (86)
T 1wvk_A           43 AMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVAC   80 (86)
T ss_dssp             TCCEEETTTTEEECCSSCSHHHHHHHHTCCSCCGGGTT
T ss_pred             hhCCCChHhHhhHHhcCChHHHHHHHHcCCCCCCHHHH
Confidence            34578888888   566678888888888887766655

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.18  E-value=0.07  Score=31.61  Aligned_cols=26  Identities=27%  Similarity=0.468  Sum_probs=17.5

Q ss_pred             ccCcchhhccC-------CchHHHHHHHHhcCC
Q psy12195        220 IQCPYCITDFS-------EDKNLIQHIVSVHLG  245 (254)
Q Consensus       220 ~~C~~C~~~f~-------~~~~l~~H~~~~h~~  245 (254)
                      -.|.+|++.++       ..++|.+|+++.|..
T Consensus        29 A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           29 ATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             EEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            35777777665       356788888777643

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.11  E-value=0.4  Score=23.51  Aligned_cols=23  Identities=26%  Similarity=0.434  Sum_probs=21.0

Q ss_pred             CCCccCcchhhccCCchHHHHHH
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      ...+.|..|+-+|+...++..|.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHK   28 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHK   28 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhh
Confidence            45788999999999999999997

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=86.91  E-value=0.24  Score=29.31  Aligned_cols=38  Identities=29%  Similarity=0.621  Sum_probs=17.6

Q ss_pred             cccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCC
Q psy12195        162 FTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFE  200 (254)
Q Consensus       162 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  200 (254)
                      |.|..||.++. +..+..|.....+-..|.|-.|++.|.
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            44555554443 224444544444334455555555553

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=84.86  E-value=0.36  Score=26.07  Aligned_cols=20  Identities=25%  Similarity=0.589  Sum_probs=16.7

Q ss_pred             ccCcchhhccCCchHHHHHH
Q psy12195        220 IQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~  239 (254)
                      -.|.+|+..|+.+-.|+.|+
T Consensus        14 ~eC~lC~vkYs~r~slqDHI   33 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHI   33 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHH
T ss_pred             ccccccCcccccccchhhhh
Confidence            47999999999888888774

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=83.87  E-value=0.14  Score=30.35  Aligned_cols=48  Identities=17%  Similarity=0.380  Sum_probs=23.0

Q ss_pred             ceeec-CcCCcccCCCCccchhhhhccCCCCCCcccccccccccccHHHHHhHH
Q psy12195         43 FLMKC-TNCNVLVPRDEILPHLSIQHCQGTTPSIYECNQCKEKTNDMTTMLNHY   95 (254)
Q Consensus        43 ~~~~C-~~C~~~~~~~~~l~~~~~~h~~~~~~~~~~C~~C~~~~~~~~~l~~h~   95 (254)
                      .+..| ..|+..+.... |..|....   =...+..|..|+..+.. ..|..|.
T Consensus        15 ~~v~C~~~C~~~v~r~~-l~~H~~~~---C~~r~v~C~~C~~~~~~-~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKLSRRD-LPAHLQHD---CPKRRLKCEFCGCDFSG-EAYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBCCSSS-STTTTTTS---CTTSCCCCSSSCCCCCH-HHHHHTT
T ss_pred             cccCCCccccHHhhHhH-HHhhCHhh---CCCcceECCCCCCccCH-HHHHHHH
Confidence            34566 45665554433 33222211   23345667777766543 4455554

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=81.74  E-value=1.3  Score=27.56  Aligned_cols=49  Identities=14%  Similarity=0.348  Sum_probs=28.6

Q ss_pred             ccCCCcccCCChHHHHHHHhHhhCCCcccCC---CCcccCCCHHHHHHHHHHhhcCCCC
Q psy12195        163 TCRRCPSTFLNSATLSKHVKMEHNSKSYQCN---ECPESFERLNKLKRHKFQAHNDSVH  218 (254)
Q Consensus       163 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~---~C~~~f~~~~~l~~H~~~~h~~~~~  218 (254)
                      .|+.|...+..-.       .+..+..|.|+   .|.++|-+...|+.|+.-.|..+.+
T Consensus        39 ~Cp~C~~~V~rVe-------~~~~~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~~   90 (101)
T 3vk6_A           39 MCPGCSDPVQRIE-------QCTRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGK   90 (101)
T ss_dssp             BCTTTCCBCSEEE-------EEEGGGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSCC
T ss_pred             CCcCcCCeeeeeE-------EeccCCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcCC
Confidence            5666666654321       12235566666   3777777777777777655655433

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=81.05  E-value=1.1  Score=28.21  Aligned_cols=12  Identities=17%  Similarity=0.589  Sum_probs=8.3

Q ss_pred             ceeecCcCCccc
Q psy12195         43 FLMKCTNCNVLV   54 (254)
Q Consensus        43 ~~~~C~~C~~~~   54 (254)
                      .+++|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            456777777776

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=80.90  E-value=0.45  Score=25.02  Aligned_cols=12  Identities=17%  Similarity=0.335  Sum_probs=6.4

Q ss_pred             eeecCcCCcccC
Q psy12195         44 LMKCTNCNVLVP   55 (254)
Q Consensus        44 ~~~C~~C~~~~~   55 (254)
                      .|.|..||..+.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            355555555554

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=80.38  E-value=1.5  Score=22.84  Aligned_cols=14  Identities=14%  Similarity=0.548  Sum_probs=6.9

Q ss_pred             eeecCcCCcccCCC
Q psy12195         44 LMKCTNCNVLVPRD   57 (254)
Q Consensus        44 ~~~C~~C~~~~~~~   57 (254)
                      .|.|.-||+.|...
T Consensus         3 iY~C~rCg~~fs~~   16 (48)
T 4ayb_P            3 VYRCGKCWKTFTDE   16 (48)
T ss_dssp             --CCCCTTTTCCCC
T ss_pred             EEEeeccCCCccHH
Confidence            35556666555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	254
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.69
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.5
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.36
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.28
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.25
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.25
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.23
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.23
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.22
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.21
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.2
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.16
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.13
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.12
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.1
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.08
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.07
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.05
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.03
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.03
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.02
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.98
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.98
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.94
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.93
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.92
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.87
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.76
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.74
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.74
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.73
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.68
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.6
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.59
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.5
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.48
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.46
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.46
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.35
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.32
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.29
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.21
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.2
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.18
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.11
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.07
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.06
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.04
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.95
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.94
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.93
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.92
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.9
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.87
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.82
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.78
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.77
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.75
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.74
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.73
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.7
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.67
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.54
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.53
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.45
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.44
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.44
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.4
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.38
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.38
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.34
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.32
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.32
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.28
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.26
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.26
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.18
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	97.13
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.08
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.05
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.03
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.9
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.76
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.64
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.51
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.42
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.29
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.22
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.09
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.05
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.04
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.94
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.91
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.9
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.87
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.74
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.21
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.08
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.07
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.07
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.99
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.95
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.65
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.09
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.75
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.55
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.53
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.28
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.51
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.65
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.35
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.04
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	90.37
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	89.93
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.47
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.03
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.47
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	88.35
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	88.21
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	87.53
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	86.7
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	85.81
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.35
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	84.41
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	81.37
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	81.08
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	80.9
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	80.58
d2dkta1	74	RING finger and CHY zinc finger domain-containing	80.33

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=9.5e-18  Score=93.67  Aligned_cols=50  Identities=22%  Similarity=0.588  Sum_probs=25.4

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +||.|. ||+.|.....|..|+++|++++||.|++||++|.+.+.|.+|++
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            445552 55555555555555555555555555555555555555555543

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.2e-17  Score=91.46  Aligned_cols=53  Identities=28%  Similarity=0.622  Sum_probs=49.1

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhc
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      |+||.| .||++|.....|.+|++ .|++ +++|+|+.|++.|++.++|.+|+ ++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~-~Ht~-ekpy~C~~C~k~F~~~~~L~~H~-r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMS-MHLG-LRPYGCGVCGKKFKMKHHLVGHM-KIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHH-HHSC-CCSEECTTTSCEESSSHHHHHHH-TTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhh-cccc-ccCCcCCCcCCEecCHHHHHHHH-hcC
Confidence            689999 59999999999999998 7888 78999999999999999999998 655

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.6e-15  Score=75.17  Aligned_cols=36  Identities=25%  Similarity=0.325  Sum_probs=30.8

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      ++||+|..|++.|+..++|.+|+++.|+||+||+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            578888888888888888888886788888888885

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.3e-13  Score=68.78  Aligned_cols=36  Identities=31%  Similarity=0.644  Sum_probs=23.8

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCc
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  223 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  223 (254)
                      ++||.|.+||++|...+.|.+|++..|++ ++||+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~-ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCC-CcCcCCc
Confidence            56666666666666666666666555666 6666665

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=8.1e-13  Score=65.83  Aligned_cols=34  Identities=26%  Similarity=0.609  Sum_probs=26.6

Q ss_pred             hHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        182 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       182 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      ++|+||+||.|++|+++|.+.++|.+|++..|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3678888888888888888888888887766655

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=5.3e-13  Score=67.66  Aligned_cols=36  Identities=25%  Similarity=0.631  Sum_probs=24.4

Q ss_pred             HHHhHhhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        179 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       179 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +|+.+|++++||.|++||++|...++|..|++ .|++
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r-~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCc-cCCC
Confidence            35666777777777777777777777777776 4444

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=1.5e-12  Score=64.97  Aligned_cols=32  Identities=25%  Similarity=0.555  Sum_probs=24.9

Q ss_pred             hHhhCCCcccCCCCcccCCCHHHHHHHHHHhh
Q psy12195        182 KMEHNSKSYQCNECPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       182 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  213 (254)
                      ++|++++||.|.+||++|.+.+.|.+|++.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            46788888888888888888888888887544

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.9e-12  Score=62.12  Aligned_cols=28  Identities=32%  Similarity=0.661  Sum_probs=16.8

Q ss_pred             HhhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        183 MEHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       183 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +|++++||.|.+||++|.+.+.|..|++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r   28 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQR   28 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcc
Confidence            3556666666666666666666666655

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.23  E-value=2.4e-12  Score=60.60  Aligned_cols=29  Identities=21%  Similarity=0.545  Sum_probs=22.9

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      +||+|++|++.|+..++|.+|+ ++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHH-HTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHccccc-CcccCCC
Confidence            4778888888888888888887 7888775

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=1.5e-12  Score=65.43  Aligned_cols=31  Identities=29%  Similarity=0.592  Sum_probs=25.6

Q ss_pred             HHhHhhCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        180 HVKMEHNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       180 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      |.++|++|+||.|++|+++|.+++.|.+|++
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r   32 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHh
Confidence            5677888888888888888888888888877

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=4.7e-12  Score=59.46  Aligned_cols=29  Identities=31%  Similarity=0.681  Sum_probs=24.0

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      +||.|++|++.|+.+++|.+|+ ++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~-r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHI-KTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHH-HGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhc-CccCCcC
Confidence            4788888888888888888888 8888875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3e-12  Score=62.03  Aligned_cols=32  Identities=34%  Similarity=0.569  Sum_probs=30.1

Q ss_pred             hcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        213 HNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       213 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      |++ ++||+|++|+++|++.++|..|+ +.|+||
T Consensus         2 HTg-ekpy~C~~Cgk~F~~~~~L~~H~-r~HtgE   33 (33)
T d1x6ea1           2 HSG-EKPYGCVECGKAFSRSSILVQHQ-RVHTGE   33 (33)
T ss_dssp             TTT-CCCEECSSSCCEESSHHHHHHHH-HGGGCS
T ss_pred             cCC-CCCeeCCCCCCEeCchHHhHhhc-cccCCC
Confidence            667 89999999999999999999998 999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.8e-12  Score=65.65  Aligned_cols=36  Identities=22%  Similarity=0.530  Sum_probs=32.3

Q ss_pred             HHHHhhcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        208 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       208 H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      |++ .|.+ ++||+|++|++.|...++|..|+ ++|+||
T Consensus         3 H~~-~Ht~-ekpy~C~~CgK~F~~~s~L~~H~-r~HtGE   38 (38)
T d2cota2           3 SEW-QQRE-RRRYKCDECGKSFSHSSDLSKHR-RTHTGE   38 (38)
T ss_dssp             CCS-CCCC-SCSSBCSSSCCBCSCHHHHHHHH-TTTCCS
T ss_pred             cCc-ccCC-CCCEecCCCCceeeCHHHHHHhC-ccCCCC
Confidence            444 5777 89999999999999999999999 999997

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=1.3e-11  Score=60.55  Aligned_cols=31  Identities=23%  Similarity=0.502  Sum_probs=20.9

Q ss_pred             hhCCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        184 EHNSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       184 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      |+|++||.|++|+++|.+.++|.+|++ .|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r-~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcc-ccCC
Confidence            466777777777777777777777776 4444

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=9.7e-12  Score=61.63  Aligned_cols=32  Identities=25%  Similarity=0.489  Sum_probs=28.0

Q ss_pred             ccCcc--hhhccCCchHHHHHHHHhcCCCCCCCCC
Q psy12195        220 IQCPY--CITDFSEDKNLIQHIVSVHLGKEGTAPA  252 (254)
Q Consensus       220 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~c~  252 (254)
                      |.|+.  |++.|+.+++|.+|+ +.|+|++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~-r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhcccc-CeeCCCCCEeCC
Confidence            67876  999999999999998 789999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=1e-11  Score=57.65  Aligned_cols=24  Identities=33%  Similarity=0.671  Sum_probs=12.9

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHH
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      |+||.|++|+++|.+.+.|.+|++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r   24 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIR   24 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCC
Confidence            345555555555555555555555

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.08  E-value=3.9e-11  Score=56.36  Aligned_cols=27  Identities=26%  Similarity=0.625  Sum_probs=13.4

Q ss_pred             ccccCCCcccCCChHHHHHHHhHhhCC
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKMEHNS  187 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  187 (254)
                      ||.|++|+++|.....|..|+++|+||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            444555555555555555555555444

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=5.2e-11  Score=55.80  Aligned_cols=27  Identities=44%  Similarity=0.919  Sum_probs=15.2

Q ss_pred             ccccCCCcccCCChHHHHHHHhHhhCC
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKMEHNS  187 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  187 (254)
                      ||.|++||++|...+.|..|+++|+++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            555555555555555555555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.7e-11  Score=60.17  Aligned_cols=34  Identities=21%  Similarity=0.483  Sum_probs=30.4

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .|++ ++||+|++|++.|+.+++|..|+++.|+++
T Consensus         2 ~HTg-ekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           2 THSG-EKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCSC-CCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             ccCC-CCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            5777 899999999999999999999997887654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=4.4e-11  Score=55.43  Aligned_cols=27  Identities=37%  Similarity=0.818  Sum_probs=17.0

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      +||+|++|++.|+.+++|.+|+ ++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~-r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHI-RTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHH-HHHHC
T ss_pred             cCccCCCCcCEecccccccccC-CCccC
Confidence            5666666666666666666666 55554

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.4e-11  Score=59.17  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=30.1

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      .|++ ++||+|++|+++|+.+++|..|+ +.|.+++
T Consensus         2 ~HTg-ekPy~C~~C~k~F~~~~~L~~H~-r~H~~~~   35 (36)
T d1x6ha2           2 THTG-EKPYACSHCDKTFRQKQLLDMHF-KRYHDPN   35 (36)
T ss_dssp             TCCC-CCCEECSSSSCEESSHHHHHHHH-HHTTCSS
T ss_pred             CCCC-CCCEECCCCCCCcCCHhHHHHhC-cccCCCC
Confidence            5777 89999999999999999999999 7777653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=8.8e-11  Score=58.11  Aligned_cols=32  Identities=28%  Similarity=0.787  Sum_probs=25.4

Q ss_pred             cccCC--CcccCCChHHHHHHHhHhhCCCcccCC
Q psy12195        162 FTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCN  193 (254)
Q Consensus       162 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  193 (254)
                      |.|+.  |+++|.....|..|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56665  888888888888888888888888886

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=5.5e-11  Score=58.32  Aligned_cols=32  Identities=22%  Similarity=0.554  Sum_probs=29.0

Q ss_pred             hcCCCCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        213 HNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       213 h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      |++ ++||+|++|++.|+++++|..|+ +.|+++
T Consensus         2 ~TG-ekPy~C~~C~k~F~~~~~L~~H~-r~Ht~~   33 (35)
T d1srka_           2 SSG-KRPFVCRICLSAFTTKANCARHL-KVHTDT   33 (35)
T ss_dssp             CSC-CSCEECSSSCCEESSHHHHHHHH-GGGTSC
T ss_pred             CCC-CccccCCCCCCcccChHHHHHHc-cccCCc
Confidence            455 89999999999999999999999 889875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.2e-10  Score=52.49  Aligned_cols=23  Identities=35%  Similarity=0.713  Sum_probs=13.5

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +||+|.+|||+|+..+.|..|++
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqr   23 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQR   23 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCcc
Confidence            45556666666666666665555

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=6.4e-11  Score=59.36  Aligned_cols=32  Identities=28%  Similarity=0.541  Sum_probs=29.3

Q ss_pred             hhcCCCCCccCcchhhccCCchHHHHHHHHhcCC
Q psy12195        212 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       212 ~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      .|++ ++||+|+.|+++|+++++|.+|+ +.|.+
T Consensus         5 ~HTg-eKPy~C~~C~k~F~~~~~L~~H~-r~H~~   36 (37)
T d1p7aa_           5 GSTG-IKPFQCPDCDRSFSRSDHLALHR-KRHML   36 (37)
T ss_dssp             TTCC-SSSBCCTTTCCCBSSHHHHHHHH-GGGTC
T ss_pred             ccCC-ccCeEeCCCCCEecCHHHHHHHH-hcCcC
Confidence            6788 89999999999999999999998 88864

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.2e-10  Score=53.95  Aligned_cols=28  Identities=29%  Similarity=0.676  Sum_probs=20.1

Q ss_pred             CCccCcc--hhhccCCchHHHHHHHHhcCCC
Q psy12195        218 HQIQCPY--CITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       218 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      +||+|++  |++.|+.+++|.+|+ ++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHL-RSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHH-HHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhc-CcCcCC
Confidence            4677766  777777777777776 777765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.7e-10  Score=51.28  Aligned_cols=24  Identities=21%  Similarity=0.593  Sum_probs=12.6

Q ss_pred             ccccCCCcccCCChHHHHHHHhHh
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKME  184 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~h  184 (254)
                      ||+|++||++|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            455555555555555555555554

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.6e-10  Score=54.29  Aligned_cols=29  Identities=24%  Similarity=0.629  Sum_probs=22.5

Q ss_pred             CCccCcc--hhhccCCchHHHHHHHHhcCCCC
Q psy12195        218 HQIQCPY--CITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       218 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      +||.|++  |++.|+..++|.+|+ ++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~-r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHK-RTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHH-TTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhc-CcccccC
Confidence            4788854  888888888888888 7788875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2.6e-10  Score=53.83  Aligned_cols=28  Identities=39%  Similarity=0.769  Sum_probs=18.0

Q ss_pred             CCccCcc--hhhccCCchHHHHHHHHhcCCC
Q psy12195        218 HQIQCPY--CITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       218 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      +||+|++  |++.|+..++|.+|+ ++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~-r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHV-RIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHH-HHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccc-cccCCC
Confidence            3566655  666666666666666 566664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.4e-09  Score=49.78  Aligned_cols=23  Identities=39%  Similarity=0.702  Sum_probs=13.2

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNE--CPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~--C~~~f~~~~~l~~H~~  210 (254)
                      +||.|++  ||++|...+.|.+|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLR   25 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             CCeeCCCCCCCceECChhHhhhhcC
Confidence            3555555  5555555555555555

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2.9e-09  Score=50.13  Aligned_cols=23  Identities=30%  Similarity=0.533  Sum_probs=12.1

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNE--CPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~--C~~~f~~~~~l~~H~~  210 (254)
                      +||.|++  ||++|...+.|.+|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVR   25 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCcccc
Confidence            3555544  5555555555555554

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.74  E-value=9.1e-10  Score=58.05  Aligned_cols=30  Identities=27%  Similarity=0.617  Sum_probs=17.2

Q ss_pred             CCCccCcc--hhhccCCchHHHHHHHHhcCCCC
Q psy12195        217 VHQIQCPY--CITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       217 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      +++|+|++  |++.|+..++|..|+ ++|+||+
T Consensus        16 ekpy~C~~~~C~k~F~~~~~L~~H~-r~Htgek   47 (47)
T d1ncsa_          16 DKTFECLFPGCTKTFKRRYNIRSHI-QTHLEDR   47 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHH-HHHTTTC
T ss_pred             CCCeECCcCCCCccccCchHHHhhc-ccccCCC
Confidence            45555554  666666666666665 5555553

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.73  E-value=3.6e-10  Score=59.64  Aligned_cols=37  Identities=27%  Similarity=0.555  Sum_probs=24.1

Q ss_pred             HHHHHhHhhCCCcccCCC--CcccCCCHHHHHHHHHHhhcC
Q psy12195        177 LSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       177 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +..|+ .|++++||.|++  |+++|...+.|.+|++ .|.+
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r-~Htg   45 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLE   45 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHH-HHTT
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcc-cccC
Confidence            33444 367777777765  7777777777777776 4444

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=6.1e-09  Score=49.43  Aligned_cols=27  Identities=26%  Similarity=0.557  Sum_probs=12.7

Q ss_pred             ccccC--CCcccCCChHHHHHHHhHhhCC
Q psy12195        161 MFTCR--RCPSTFLNSATLSKHVKMEHNS  187 (254)
Q Consensus       161 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  187 (254)
                      ||.|+  .|+++|...+.|..|+++|+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            44442  3444444444444444444444

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.60  E-value=1.5e-08  Score=48.25  Aligned_cols=27  Identities=26%  Similarity=0.538  Sum_probs=14.5

Q ss_pred             CCccCcc--hhhccCCchHHHHHHHHhcCC
Q psy12195        218 HQIQCPY--CITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       218 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      +||.|++  |++.|+..++|.+|+ ++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~-r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHK-KSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHH-GGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHh-hhccC
Confidence            4555555  555555555555555 55543

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.59  E-value=4.1e-09  Score=49.01  Aligned_cols=26  Identities=38%  Similarity=0.834  Sum_probs=13.9

Q ss_pred             CccCcc--hhhccCCchHHHHHHHHhcCC
Q psy12195        219 QIQCPY--CITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       219 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      ||+|++  |++.|+..++|.+|+ +.|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~-r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHI-RIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHT-HHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhc-CccCC
Confidence            455544  555555555555555 45543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.6e-08  Score=46.37  Aligned_cols=25  Identities=36%  Similarity=0.825  Sum_probs=15.3

Q ss_pred             CCccCcc--hhhccCCchHHHHHHHHhc
Q psy12195        218 HQIQCPY--CITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       218 ~~~~C~~--C~~~f~~~~~l~~H~~~~h  243 (254)
                      +||+|++  |+++|+..++|.+|+ +.|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~-r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHI-LTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHH-HHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHH-hhc
Confidence            3566655  666666666666666 544

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.48  E-value=5.5e-08  Score=46.27  Aligned_cols=24  Identities=38%  Similarity=0.830  Sum_probs=17.5

Q ss_pred             CCcccCCC--CcccCCCHHHHHHHHH
Q psy12195        187 SKSYQCNE--CPESFERLNKLKRHKF  210 (254)
Q Consensus       187 ~~~~~C~~--C~~~f~~~~~l~~H~~  210 (254)
                      |+||.|++  |+++|...+.|.+|++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r   26 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhh
Confidence            46777766  7777777777777776

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=3.9e-08  Score=45.62  Aligned_cols=23  Identities=35%  Similarity=0.723  Sum_probs=13.4

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNE--CPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~--C~~~f~~~~~l~~H~~  210 (254)
                      +||.|++  |+++|...+.|.+|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r   25 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIR   25 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcC
Confidence            4555654  6666666666666655

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=4.1e-08  Score=41.70  Aligned_cols=26  Identities=31%  Similarity=0.588  Sum_probs=19.0

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      |.+|++|++.|+.+..|..|| +.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hm-r~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHM-RCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHG-GGCCC
T ss_pred             CCccchhhhHhcchhHHHHHh-hccCC
Confidence            356777888888888887777 66664

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=8.9e-08  Score=43.76  Aligned_cols=32  Identities=25%  Similarity=0.413  Sum_probs=24.7

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  250 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  250 (254)
                      +...|..||+.|.....|.+|. ..|+||+||+
T Consensus         4 k~~~ce~cgk~frdvyhlnrhk-lshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHK-LSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHG-GGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhh-cccCCCCCCC
Confidence            3455888888888888888886 8888888874

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=7.9e-08  Score=44.03  Aligned_cols=23  Identities=30%  Similarity=0.704  Sum_probs=15.1

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNE--CPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~--C~~~f~~~~~l~~H~~  210 (254)
                      +||.|+.  ||++|...++|.+|++
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r   25 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHIL   25 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHh
Confidence            4666655  6666666666666666

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=3.7e-07  Score=40.18  Aligned_cols=30  Identities=30%  Similarity=0.541  Sum_probs=20.5

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      +||+|..|....+..++|..|++..|+.|+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccccccchhhhhhhhcccccCC
Confidence            366777777777777777777777776653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3.4e-07  Score=41.82  Aligned_cols=28  Identities=25%  Similarity=0.520  Sum_probs=15.9

Q ss_pred             ccCCCcccCCChHHHHHHHhHhhCCCcc
Q psy12195        163 TCRRCPSTFLNSATLSKHVKMEHNSKSY  190 (254)
Q Consensus       163 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~  190 (254)
                      .|..||+.|.....|.+|..+|++|+||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4555555555555555555555555555

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=6.8e-07  Score=39.82  Aligned_cols=25  Identities=28%  Similarity=0.607  Sum_probs=18.8

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHH
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKFQ  211 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~~  211 (254)
                      |+||.|++|+..|..+..+..|+++
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeeec
Confidence            4677777777777777777777774

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4.8e-07  Score=39.17  Aligned_cols=26  Identities=23%  Similarity=0.595  Sum_probs=17.1

Q ss_pred             cccCCCcccCCChHHHHHHHhHhhCC
Q psy12195        162 FTCRRCPSTFLNSATLSKHVKMEHNS  187 (254)
Q Consensus       162 ~~C~~C~~~f~~~~~l~~H~~~h~~~  187 (254)
                      ..|..||+.|..++.|++|+.+|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35666677776666667766666654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.11  E-value=1.1e-06  Score=38.60  Aligned_cols=24  Identities=33%  Similarity=0.717  Sum_probs=14.9

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHH
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      |+||.|.+||+.|.......+|.+
T Consensus         1 EkPf~C~~CgrkFArsderkRH~k   24 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTK   24 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHG
T ss_pred             CCCcccchhhhhhhcchhhhhhhh
Confidence            456666666666666666666655

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1.4e-06  Score=36.86  Aligned_cols=21  Identities=38%  Similarity=0.708  Sum_probs=10.7

Q ss_pred             ccCCCCcccCCCHHHHHHHHH
Q psy12195        190 YQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      .+|+.|++.|+.+..|..|++
T Consensus         2 hkc~~c~kcfsrkdklk~hmr   22 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMR   22 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGG
T ss_pred             CccchhhhHhcchhHHHHHhh
Confidence            345555555555555555544

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=1.3e-06  Score=38.39  Aligned_cols=27  Identities=26%  Similarity=0.498  Sum_probs=23.3

Q ss_pred             CcccccCCCcccCCChHHHHHHHhHhh
Q psy12195        159 TLMFTCRRCPSTFLNSATLSKHVKMEH  185 (254)
Q Consensus       159 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  185 (254)
                      ++||.|+.||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478999999999999999999988874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.1e-06  Score=38.18  Aligned_cols=27  Identities=30%  Similarity=0.573  Sum_probs=14.8

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhC
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHN  186 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  186 (254)
                      +||+|.+|.....+++.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455555555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=1.6e-06  Score=37.51  Aligned_cols=25  Identities=36%  Similarity=0.623  Sum_probs=13.4

Q ss_pred             cCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        221 QCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       221 ~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      .|.+|||.|...+.|.+|. .+|+||
T Consensus         4 vc~ecgkaf~essklkrh~-lvhtge   28 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQ-LVHTGE   28 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHG-GGTSCC
T ss_pred             hHHHHhHHHHHHHHHHHHh-hcccCC
Confidence            3555555555555555555 555543

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.94  E-value=3.3e-06  Score=35.93  Aligned_cols=26  Identities=31%  Similarity=0.594  Sum_probs=21.1

Q ss_pred             cCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        221 QCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       221 ~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      +||.|.+.|.++..|..|- +.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhn-r~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHN-RKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHH-HHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhcc-ccccCCC
Confidence            5888888888888888887 7788875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.6e-06  Score=37.92  Aligned_cols=29  Identities=24%  Similarity=0.531  Sum_probs=25.4

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      ++||.||+|...|..+..+.-|+ +.|-|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhv-rshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHV-RSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHH-HHHSCC
T ss_pred             CCCcccchHHHHhhccccceEee-ecccCc
Confidence            47999999999999999999999 666553

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.92  E-value=3.1e-06  Score=40.91  Aligned_cols=26  Identities=31%  Similarity=0.638  Sum_probs=22.8

Q ss_pred             hCCCcccCCCCcccCCCHHHHHHHHH
Q psy12195        185 HNSKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       185 ~~~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      +|.+||.|.+|+|.|.+..++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46789999999999999999999974

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=7.2e-06  Score=36.02  Aligned_cols=28  Identities=32%  Similarity=0.509  Sum_probs=24.1

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        188 KSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +||+|.+|...-.+.++|+.|++..|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            5889999998888899999999887765

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=5.7e-06  Score=36.19  Aligned_cols=27  Identities=22%  Similarity=0.306  Sum_probs=18.5

Q ss_pred             ccCcchhhccCCchHHHHHHHHhcCCCC
Q psy12195        220 IQCPYCITDFSEDKNLIQHIVSVHLGKE  247 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~  247 (254)
                      |.|++|+......+-|+.|+ +.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHI-RsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHI-RTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHH-HHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHH-HHhcCCC
Confidence            56777777777777777776 6666653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=3.1e-06  Score=36.78  Aligned_cols=27  Identities=22%  Similarity=0.497  Sum_probs=12.8

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcCC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      +||+|..|.......+.|..|+ +.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhl-r~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHL-RSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHH-TTCCS
T ss_pred             CcceeeecccccCCchheEEee-ecccC
Confidence            3444444444444444455554 44444

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.82  E-value=3.8e-06  Score=35.14  Aligned_cols=25  Identities=28%  Similarity=0.749  Sum_probs=20.6

Q ss_pred             CccCcchhhccCCchHHHHHHHHhc
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      ||+|+.|+..|-++..|+.||...|
T Consensus         2 pykcsscsqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhcC
Confidence            6889999999999999999985543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=5.2e-06  Score=36.97  Aligned_cols=25  Identities=24%  Similarity=0.670  Sum_probs=12.9

Q ss_pred             CccCcc--hhhccCCchHHHHHHHHhc
Q psy12195        219 QIQCPY--CITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       219 ~~~C~~--C~~~f~~~~~l~~H~~~~h  243 (254)
                      ||.|.+  |+++++..++|..|++..|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455544  5555555555555554333

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=8.9e-06  Score=36.22  Aligned_cols=26  Identities=27%  Similarity=0.666  Sum_probs=17.6

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHHhh
Q psy12195        188 KSYQCNE--CPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       188 ~~~~C~~--C~~~f~~~~~l~~H~~~~h  213 (254)
                      +||.|.+  |++++...++|..|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4677765  7777777777777776544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.6e-05  Score=34.73  Aligned_cols=26  Identities=19%  Similarity=0.537  Sum_probs=17.5

Q ss_pred             cccCCCcccCCChHHHHHHHhHhhCC
Q psy12195        162 FTCRRCPSTFLNSATLSKHVKMEHNS  187 (254)
Q Consensus       162 ~~C~~C~~~f~~~~~l~~H~~~h~~~  187 (254)
                      |.|+.||.....++-|..|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            56666666666666666676666665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=7.4e-06  Score=35.90  Aligned_cols=27  Identities=30%  Similarity=0.600  Sum_probs=17.8

Q ss_pred             CCccCcchhhccCCchHHHHHHHHhcC
Q psy12195        218 HQIQCPYCITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       218 ~~~~C~~C~~~f~~~~~l~~H~~~~h~  244 (254)
                      +||+|..|.....+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            356677777666777777777666553

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.73  E-value=8e-06  Score=36.69  Aligned_cols=27  Identities=33%  Similarity=0.692  Sum_probs=18.0

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      ||.|.+|++.|....-|.+|....|++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            566677777777666667776666655

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.70  E-value=1.5e-05  Score=33.24  Aligned_cols=23  Identities=26%  Similarity=0.803  Sum_probs=13.8

Q ss_pred             cccCCCcccCCChHHHHHHHhHh
Q psy12195        162 FTCRRCPSTFLNSATLSKHVKME  184 (254)
Q Consensus       162 ~~C~~C~~~f~~~~~l~~H~~~h  184 (254)
                      |+|.+|.++|...+.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.67  E-value=6.1e-06  Score=37.09  Aligned_cols=28  Identities=29%  Similarity=0.605  Sum_probs=25.9

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      ||.|..|++.|+...-|.+|....|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6899999999999999999998888874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.54  E-value=5.3e-05  Score=32.14  Aligned_cols=26  Identities=27%  Similarity=0.516  Sum_probs=17.2

Q ss_pred             ccCCCcccCCChHHHHHHHhHhhCCC
Q psy12195        163 TCRRCPSTFLNSATLSKHVKMEHNSK  188 (254)
Q Consensus       163 ~C~~C~~~f~~~~~l~~H~~~h~~~~  188 (254)
                      +|+.|.+.|.+...|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46666666666666666666666653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=4.4e-05  Score=33.41  Aligned_cols=28  Identities=25%  Similarity=0.585  Sum_probs=23.7

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        188 KSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +||+|..|...-.+.++|..|++..|.+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5888999988888899999998887764

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=5.5e-05  Score=32.91  Aligned_cols=28  Identities=29%  Similarity=0.522  Sum_probs=20.7

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhCC
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHNS  187 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  187 (254)
                      ..|.|+.|.+.|.....|..||-+|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4567777777777777777777777764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=2.7e-05  Score=34.01  Aligned_cols=22  Identities=32%  Similarity=0.649  Sum_probs=12.6

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||.|..|..+|..+.+|..|++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            4555555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=4.1e-05  Score=32.87  Aligned_cols=22  Identities=23%  Similarity=0.540  Sum_probs=11.2

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||+|..|..+-...++|..|++
T Consensus         3 p~kck~cdyaaadsssl~kh~r   24 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLR   24 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CcccccccchhcchhhHhhhhh
Confidence            4555555555555555555554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.40  E-value=4.2e-05  Score=31.89  Aligned_cols=21  Identities=38%  Similarity=0.778  Sum_probs=10.4

Q ss_pred             ccCCCCcccCCCHHHHHHHHH
Q psy12195        190 YQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      |+|..|.++|-.++.|.+|++
T Consensus         1 ykcglcersfveksalsrhqr   21 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG
T ss_pred             CcccchHHHHHHHHHHHHHHH
Confidence            344555555555555555544

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=8.3e-05  Score=31.91  Aligned_cols=24  Identities=25%  Similarity=0.712  Sum_probs=12.7

Q ss_pred             ccccCCCcccCCChHHHHHHHhHh
Q psy12195        161 MFTCRRCPSTFLNSATLSKHVKME  184 (254)
Q Consensus       161 ~~~C~~C~~~f~~~~~l~~H~~~h  184 (254)
                      ||+|..|+......++|..|+++|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            455555555555555555555554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=4.9e-05  Score=36.65  Aligned_cols=26  Identities=15%  Similarity=0.447  Sum_probs=23.8

Q ss_pred             ceeeeecccccccCCCHHHHHhhhcc
Q psy12195         12 KVVIIRCETCTRNYESLESLTTHLSF   37 (254)
Q Consensus        12 ~~~~~~C~~C~~~f~~~~~l~~H~~~   37 (254)
                      |.+||.|+.|++.|-.+++|.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            67999999999999999999999764

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.34  E-value=5.6e-05  Score=32.88  Aligned_cols=28  Identities=18%  Similarity=0.493  Sum_probs=25.2

Q ss_pred             eeeeecccccccCCCHHHHHhhhcccccC
Q psy12195         13 VVIIRCETCTRNYESLESLTTHLSFKHSN   41 (254)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~   41 (254)
                      +.+|.|..|...|+.+-.|..||-+ |.+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvs-htg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVS-HTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHH-HSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeec-ccC
Confidence            5789999999999999999999987 665

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=7.3e-05  Score=32.59  Aligned_cols=24  Identities=33%  Similarity=0.682  Sum_probs=21.0

Q ss_pred             CccCcchhhccCCchHHHHHHHHh
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSV  242 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~  242 (254)
                      ||.|..|..+|.++.+|..||++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            588999999999999999999654

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.32  E-value=4.8e-05  Score=31.84  Aligned_cols=24  Identities=29%  Similarity=0.958  Sum_probs=18.9

Q ss_pred             ccCcchhhccCCchHHHHHHHHhc
Q psy12195        220 IQCPYCITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~~~~h  243 (254)
                      |.||.|-+.|+.+.++..|++..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            568888888888888888877665

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=3.7e-05  Score=34.49  Aligned_cols=27  Identities=22%  Similarity=0.408  Sum_probs=13.7

Q ss_pred             CccCcc--hhhccCCchHHHHHHHHhcCC
Q psy12195        219 QIQCPY--CITDFSEDKNLIQHIVSVHLG  245 (254)
Q Consensus       219 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~  245 (254)
                      ||.|.+  |.|.|+..+.-..|..++|+.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CccccCCChhhhhcchhhhhhhccccccC
Confidence            455544  555555555555554455543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.26  E-value=8e-05  Score=35.77  Aligned_cols=24  Identities=29%  Similarity=0.595  Sum_probs=15.4

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHH
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      .+.|.|.+|++.|.+...|-.|++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~   26 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMN   26 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHH
T ss_pred             CCccCCCCCCCccCCcccccchHh
Confidence            355666666666666666666665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.26  E-value=9.4e-05  Score=35.52  Aligned_cols=31  Identities=23%  Similarity=0.545  Sum_probs=27.2

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      .+.|+|..|++.|.+..+|-=|| +.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~-~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHM-NVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHH-HTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchH-hhhcchHH
Confidence            46799999999999999999999 88877653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.18  E-value=0.00019  Score=31.17  Aligned_cols=22  Identities=36%  Similarity=0.830  Sum_probs=11.2

Q ss_pred             cccCCC--CcccCCCHHHHHHHHH
Q psy12195        189 SYQCNE--CPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~--C~~~f~~~~~l~~H~~  210 (254)
                      ||.|+.  |++.|...+.|++|.+
T Consensus         3 py~c~hegcdk~fs~ps~lkrhek   26 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEK   26 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhh
Confidence            455543  5555555555555544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.0001  Score=31.63  Aligned_cols=26  Identities=27%  Similarity=0.520  Sum_probs=20.0

Q ss_pred             CccCcchhhccCCchHHHHHHHHhcC
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~~~h~  244 (254)
                      .|+||.|+...+.++.|..|++..|+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            36788888888888888888876664

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.08  E-value=0.0001  Score=32.03  Aligned_cols=25  Identities=36%  Similarity=0.608  Sum_probs=21.8

Q ss_pred             CCccCcc--hhhccCCchHHHHHHHHhc
Q psy12195        218 HQIQCPY--CITDFSEDKNLIQHIVSVH  243 (254)
Q Consensus       218 ~~~~C~~--C~~~f~~~~~l~~H~~~~h  243 (254)
                      -||+|+.  |++.|+..+.|.+|- .+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhe-kvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHE-KVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHH-HHH
T ss_pred             CCccCCccCccccccCHHHHhhhh-hcc
Confidence            3799988  999999999999997 555

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.05  E-value=0.00011  Score=32.01  Aligned_cols=27  Identities=26%  Similarity=0.541  Sum_probs=16.5

Q ss_pred             CccCcc--hhhccCCchHHHHHHHHhcCCC
Q psy12195        219 QIQCPY--CITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       219 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      ||.|..  |.|.|.+.-.|.+|. ..|+||
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs-~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHS-LTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHH-HHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhh-ccccCC
Confidence            455544  666666666666665 566554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=0.00025  Score=30.28  Aligned_cols=22  Identities=27%  Similarity=0.659  Sum_probs=15.6

Q ss_pred             CccCcchhhccCCchHHHHHHH
Q psy12195        219 QIQCPYCITDFSEDKNLIQHIV  240 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~~  240 (254)
                      ||+|+.||+.+-.+.+|..|-.
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4677777777777777777753

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00014  Score=32.59  Aligned_cols=28  Identities=25%  Similarity=0.724  Sum_probs=18.7

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHHhhcC
Q psy12195        188 KSYQCNE--CPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       188 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +||.|++  |.|+|++.+.-..|+...|.+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4677766  777777777777776445543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.76  E-value=0.00049  Score=29.95  Aligned_cols=20  Identities=20%  Similarity=0.408  Sum_probs=9.9

Q ss_pred             CcccCCChHHHHHHHhHhhC
Q psy12195        167 CPSTFLNSATLSKHVKMEHN  186 (254)
Q Consensus       167 C~~~f~~~~~l~~H~~~h~~  186 (254)
                      |++.|.+.-.|.+|..+|++
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            44555555455555554444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.64  E-value=0.00088  Score=28.54  Aligned_cols=22  Identities=23%  Similarity=0.650  Sum_probs=19.2

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||+|+-||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6889999999999999988864

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.51  E-value=0.0014  Score=27.30  Aligned_cols=24  Identities=29%  Similarity=0.591  Sum_probs=18.7

Q ss_pred             ccCCCCcccCCCHHHHHHHHHHhh
Q psy12195        190 YQCNECPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       190 ~~C~~C~~~f~~~~~l~~H~~~~h  213 (254)
                      |.||.|-+.|..+.++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888888877655

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.42  E-value=0.0013  Score=27.22  Aligned_cols=22  Identities=27%  Similarity=0.798  Sum_probs=15.3

Q ss_pred             cccCCCCcccCCCHHHHHHHHH
Q psy12195        189 SYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ||+|.-|...|.++..|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            5677777777777777777664

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0013  Score=28.16  Aligned_cols=25  Identities=24%  Similarity=0.453  Sum_probs=22.1

Q ss_pred             eeecccccccCCCHHHHHhhhcccc
Q psy12195         15 IIRCETCTRNYESLESLTTHLSFKH   39 (254)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~~~~h   39 (254)
                      .|+||.|+.....+++|..|++..|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4899999999999999999998644

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0025  Score=30.21  Aligned_cols=24  Identities=29%  Similarity=0.649  Sum_probs=10.3

Q ss_pred             CCcccC--CCCcccCCCHHHHHHHHH
Q psy12195        187 SKSYQC--NECPESFERLNKLKRHKF  210 (254)
Q Consensus       187 ~~~~~C--~~C~~~f~~~~~l~~H~~  210 (254)
                      ++||.|  +-|+.+|.+...|..|..
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~   29 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKH   29 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhh
Confidence            344444  234444444444444443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.003  Score=31.48  Aligned_cols=26  Identities=27%  Similarity=0.534  Sum_probs=20.8

Q ss_pred             CcccCCCCcccCCCHHHHHHHHHHhh
Q psy12195        188 KSYQCNECPESFERLNKLKRHKFQAH  213 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~~~h  213 (254)
                      ..|.|..|||.|.....|..|..++-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45788999999999999988887543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0028  Score=31.57  Aligned_cols=26  Identities=19%  Similarity=0.437  Sum_probs=21.5

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhh
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEH  185 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~  185 (254)
                      .-|.|..|++.|.....|++|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35788999999999999999888764

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0023  Score=29.20  Aligned_cols=21  Identities=19%  Similarity=0.553  Sum_probs=13.8

Q ss_pred             CccCcchhhccCCchHHHHHH
Q psy12195        219 QIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      .|.|..|+|.|+....+.+|.
T Consensus         4 afvcskcgktftrrntm~rha   24 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHA   24 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHh
Confidence            466666666666666666665

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0023  Score=27.42  Aligned_cols=24  Identities=25%  Similarity=0.391  Sum_probs=16.1

Q ss_pred             ccCcchhhccCCchHHHHHHHHhcC
Q psy12195        220 IQCPYCITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       220 ~~C~~C~~~f~~~~~l~~H~~~~h~  244 (254)
                      -+|+.|..+.++++.|..|- +.|.
T Consensus         3 ekc~ecsyscsskaalrvh~-rihc   26 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHE-RIHC   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHH-GGGC
T ss_pred             ccCcccccccCcHHHHHHhh-cccc
Confidence            45777777777777777775 5553

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0031  Score=26.99  Aligned_cols=23  Identities=22%  Similarity=0.463  Sum_probs=12.6

Q ss_pred             cccCCCcccCCChHHHHHHHhHh
Q psy12195        162 FTCRRCPSTFLNSATLSKHVKME  184 (254)
Q Consensus       162 ~~C~~C~~~f~~~~~l~~H~~~h  184 (254)
                      -+|+.|..+.++...|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            34555555555555555555554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.0024  Score=27.71  Aligned_cols=27  Identities=22%  Similarity=0.610  Sum_probs=23.5

Q ss_pred             eeecccccccCCCHHHHHhhhcccccC
Q psy12195         15 IIRCETCTRNYESLESLTTHLSFKHSN   41 (254)
Q Consensus        15 ~~~C~~C~~~f~~~~~l~~H~~~~h~~   41 (254)
                      .|.|..|++..++...++-|....|+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            588999999999999999998875653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0019  Score=30.57  Aligned_cols=25  Identities=20%  Similarity=0.408  Sum_probs=21.9

Q ss_pred             CCCccCcc--hhhccCCchHHHHHHHH
Q psy12195        217 VHQIQCPY--CITDFSEDKNLIQHIVS  241 (254)
Q Consensus       217 ~~~~~C~~--C~~~f~~~~~l~~H~~~  241 (254)
                      .+||.|+.  |+..|++...|..|..+
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~K   30 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhh
Confidence            78999955  99999999999999743

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.74  E-value=0.0023  Score=28.28  Aligned_cols=28  Identities=25%  Similarity=0.551  Sum_probs=21.0

Q ss_pred             CCccC--cchhhccCCchHHHHHHHHhcCCC
Q psy12195        218 HQIQC--PYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       218 ~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      +.|.|  +.|+..|+..+.|+.|+ -.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHL-ckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHL-SKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHH-HHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHh-hhhcCC
Confidence            45667  44888888888888888 777775

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.21  E-value=0.0066  Score=27.33  Aligned_cols=22  Identities=23%  Similarity=0.570  Sum_probs=17.9

Q ss_pred             CcccCCCCcccCCCHHHHHHHH
Q psy12195        188 KSYQCNECPESFERLNKLKRHK  209 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~  209 (254)
                      ..|.|+.||-+|++.+.|..|+
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            3578888888888888888875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.0065  Score=27.65  Aligned_cols=24  Identities=29%  Similarity=0.677  Sum_probs=11.9

Q ss_pred             cccCCCcccCCChHHHHHHHhHhh
Q psy12195        162 FTCRRCPSTFLNSATLSKHVKMEH  185 (254)
Q Consensus       162 ~~C~~C~~~f~~~~~l~~H~~~h~  185 (254)
                      |.|+.||+.|.....+.+|....+
T Consensus         5 fvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeecccccchhcchHHHHHhhhcC
Confidence            445555555555555555544433

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.0044  Score=28.68  Aligned_cols=23  Identities=22%  Similarity=0.372  Sum_probs=17.6

Q ss_pred             cchhhccCCchHHHHHHHHhcCCC
Q psy12195        223 PYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       223 ~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      +.=++.|+....|..|| ++|+||
T Consensus        11 ~R~~~pf~a~YkLv~H~-R~HTgE   33 (33)
T d2glia2          11 SRELRPFKAQYMLVVHM-RRHTGE   33 (33)
T ss_dssp             TTTTCCCSSHHHHHHHT-HHHHCC
T ss_pred             CCCCCcchhHHHHHHHH-hhcCCC
Confidence            33346688888999998 788886

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.011  Score=27.31  Aligned_cols=24  Identities=21%  Similarity=0.324  Sum_probs=18.5

Q ss_pred             cCCCcccCCChHHHHHHHhHhhCC
Q psy12195        164 CRRCPSTFLNSATLSKHVKMEHNS  187 (254)
Q Consensus       164 C~~C~~~f~~~~~l~~H~~~h~~~  187 (254)
                      |+-=++.|.....|..|+++|++|
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456788888899999999876

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.99  E-value=0.0067  Score=27.32  Aligned_cols=23  Identities=26%  Similarity=0.372  Sum_probs=20.9

Q ss_pred             CCCccCcchhhccCCchHHHHHH
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      ...|.|+-||-.|++.++|..|+
T Consensus         6 parf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHT
T ss_pred             ccceeccccceeecChhHHHhhh
Confidence            45799999999999999999996

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.95  E-value=0.0059  Score=27.90  Aligned_cols=28  Identities=25%  Similarity=0.523  Sum_probs=22.4

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  244 (254)
                      ...|.|.+|.+.++..+++-+|....|.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            3468899999999999999888766663

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.65  E-value=0.027  Score=24.29  Aligned_cols=27  Identities=26%  Similarity=0.652  Sum_probs=18.8

Q ss_pred             cccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        189 SYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       189 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      .|.|..|||...+...++.|+-..|+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            366777777777777777777655543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.09  E-value=0.023  Score=24.98  Aligned_cols=21  Identities=14%  Similarity=0.365  Sum_probs=11.7

Q ss_pred             CcccCCChHHHHHHHhHhhCC
Q psy12195        167 CPSTFLNSATLSKHVKMEHNS  187 (254)
Q Consensus       167 C~~~f~~~~~l~~H~~~h~~~  187 (254)
                      |+-.|...+.|..|+..|+||
T Consensus        11 C~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHCC
T ss_pred             cchhhccchhhhHHhhhhcCC
Confidence            555555555555555555543

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.75  E-value=0.036  Score=25.22  Aligned_cols=30  Identities=20%  Similarity=0.659  Sum_probs=24.2

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHHhhcC
Q psy12195        186 NSKSYQCNECPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       186 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      ++..|.|.+|.+.+..-+++-+|.-..|..
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            456789999999999999999998766654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.55  E-value=0.038  Score=27.28  Aligned_cols=29  Identities=21%  Similarity=0.347  Sum_probs=19.0

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHHhhc
Q psy12195        186 NSKSYQCNECPESFERLNKLKRHKFQAHN  214 (254)
Q Consensus       186 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  214 (254)
                      .+.|-.||+|+...++..+|.+|+..-|-
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            35566777777777777777777665443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.53  E-value=0.021  Score=30.87  Aligned_cols=40  Identities=20%  Similarity=0.473  Sum_probs=29.8

Q ss_pred             eeeeecccccccCCCHHHHHhhhcccccCcceeecCcCCcccCC
Q psy12195         13 VVIIRCETCTRNYESLESLTTHLSFKHSNQFLMKCTNCNVLVPR   56 (254)
Q Consensus        13 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~   56 (254)
                      ...|.||.|++.|........ +   ....-.|.|..|+.....
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L-~---d~~~~~F~C~~C~~el~e   51 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL-F---DPMTGTFRCTFCHTEVEE   51 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH-E---ETTTTEEBCSSSCCBCEE
T ss_pred             CCceECCCCCCCcchhhHHHh-c---CcCCCeEEecCCCCEEec
Confidence            678999999999998877754 2   334456899999866543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.28  E-value=0.046  Score=26.96  Aligned_cols=30  Identities=27%  Similarity=0.582  Sum_probs=26.0

Q ss_pred             CCCccCcchhhccCCchHHHHHHHHhcCCC
Q psy12195        217 VHQIQCPYCITDFSEDKNLIQHIVSVHLGK  246 (254)
Q Consensus       217 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  246 (254)
                      +.+-.||.|+...-+..+|.+|++..|-..
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            456789999999999999999998888654

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.51  E-value=0.039  Score=23.76  Aligned_cols=26  Identities=23%  Similarity=0.499  Sum_probs=19.2

Q ss_pred             CccCcc--hhhccCCchHHHHHHHHhcC
Q psy12195        219 QIQCPY--CITDFSEDKNLIQHIVSVHL  244 (254)
Q Consensus       219 ~~~C~~--C~~~f~~~~~l~~H~~~~h~  244 (254)
                      .|.|..  |+..|++++++..|..+-|.
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhcc
Confidence            366643  88888888888888866663

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.65  E-value=0.034  Score=26.35  Aligned_cols=27  Identities=26%  Similarity=0.567  Sum_probs=18.4

Q ss_pred             CCCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhh
Q psy12195        186 NSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  227 (254)
Q Consensus       186 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~  227 (254)
                      +++.|.|++||.              .+.+ ..|-+||+|+.
T Consensus         2 ~~~~~vC~vCGy--------------i~~g-~~Pe~CPvCg~   28 (36)
T d1yuza2           2 DDKFHLCPICGY--------------IHKG-EDFEKCPICFR   28 (36)
T ss_dssp             SCCEEECSSSCC--------------EEES-SCCSBCTTTCC
T ss_pred             CCCEEECCCCCC--------------EeeC-CCCCcCCCCCC
Confidence            356688888885              3344 45667888874

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.35  E-value=0.031  Score=30.74  Aligned_cols=23  Identities=26%  Similarity=0.358  Sum_probs=14.3

Q ss_pred             CcccCCCCcccCCCHHHHHHHHH
Q psy12195        188 KSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       188 ~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      ..|.|..|++.|.+...|..|.+
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            34666666666666666666643

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.04  E-value=0.061  Score=29.01  Aligned_cols=39  Identities=18%  Similarity=0.349  Sum_probs=23.5

Q ss_pred             CCCCcccccccccccccHHHHHhHHhhhccCCCCcccccchhh
Q psy12195         71 TTPSIYECNQCKEKTNDMTTMLNHYSVKHYMDINMSCVPCDVL  113 (254)
Q Consensus        71 ~~~~~~~C~~C~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~  113 (254)
                      .....|.|+.|++.|.....+..    .......|.|..|+-.
T Consensus        10 ~~~~~y~Cp~C~~~ys~Lda~~L----~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          10 TNRASFKCPVCSSTFTDLEANQL----FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CSSSEEECSSSCCEEEHHHHHHH----EETTTTEEBCSSSCCB
T ss_pred             ccCCceECCCCCCCcchhhHHHh----cCcCCCeEEecCCCCE
Confidence            44566777777777766554433    2344556677777544

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.37  E-value=0.047  Score=26.05  Aligned_cols=26  Identities=31%  Similarity=0.556  Sum_probs=17.3

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHHHhhcCCCCCccCcchhh
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  227 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~  227 (254)
                      ++.|.|++||..+              .+ ..|-.||+|+.
T Consensus         3 ~~~~~C~vCG~i~--------------~g-~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYICPICGYTA--------------VD-EAPEYCPVCGA   28 (37)
T ss_dssp             SCEEECTTTCCEE--------------ES-CCCSBCTTTCC
T ss_pred             CcEEECCCCCCEe--------------cC-CCCCcCCCCCC
Confidence            3567888888633              33 45677888874

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.47  E-value=0.11  Score=22.16  Aligned_cols=15  Identities=20%  Similarity=0.671  Sum_probs=8.6

Q ss_pred             hhhccCCchHHHHHH
Q psy12195        225 CITDFSEDKNLIQHI  239 (254)
Q Consensus       225 C~~~f~~~~~l~~H~  239 (254)
                      |.|.|.+.+.+..|+
T Consensus         9 C~K~Frd~saMRKHl   23 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHL   23 (28)
T ss_dssp             CCCEESSHHHHHHHH
T ss_pred             HHHHhhchHHHHHHh
Confidence            555555555555555

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.03  E-value=0.093  Score=28.79  Aligned_cols=27  Identities=26%  Similarity=0.426  Sum_probs=24.0

Q ss_pred             cceeeeecccccccCCCHHHHHhhhcc
Q psy12195         11 HKVVIIRCETCTRNYESLESLTTHLSF   37 (254)
Q Consensus        11 ~~~~~~~C~~C~~~f~~~~~l~~H~~~   37 (254)
                      .|...|-|..|++.|.+...|..|+++
T Consensus        11 pG~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          11 PGGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCEEecccccCccCCHHHHHHHHcc
Confidence            356678999999999999999999987

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.47  E-value=0.26  Score=20.60  Aligned_cols=17  Identities=41%  Similarity=0.923  Sum_probs=11.5

Q ss_pred             CCcccCCCHHHHHHHHH
Q psy12195        194 ECPESFERLNKLKRHKF  210 (254)
Q Consensus       194 ~C~~~f~~~~~l~~H~~  210 (254)
                      -|+++|..-..|+.|+.
T Consensus         8 ~c~kafkkhnqlkvhqf   24 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQF   24 (28)
T ss_dssp             TCCCEESSHHHHHHHHH
T ss_pred             CchHHHhhccceEEEee
Confidence            37777777777776665

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.53  E-value=0.078  Score=28.24  Aligned_cols=30  Identities=27%  Similarity=0.614  Sum_probs=26.4

Q ss_pred             ceeeeecccccccCCCHHHHHhhhcccccCc
Q psy12195         12 KVVIIRCETCTRNYESLESLTTHLSFKHSNQ   42 (254)
Q Consensus        12 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   42 (254)
                      ...+|+|..|+..|.+...|..|... |+++
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~-hnee   44 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNI-HNEE   44 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHH-HHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHh-ccHH
Confidence            46789999999999999999999987 7654

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.70  E-value=0.26  Score=21.02  Aligned_cols=17  Identities=29%  Similarity=0.450  Sum_probs=8.4

Q ss_pred             CCcccCCCHHHHHHHHH
Q psy12195        194 ECPESFERLNKLKRHKF  210 (254)
Q Consensus       194 ~C~~~f~~~~~l~~H~~  210 (254)
                      -||+.|++..-|..|.+
T Consensus         7 gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TTCCEESSHHHHHHHHH
T ss_pred             CchhhhccHHHHHhHHH
Confidence            35555555555544443

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.81  E-value=0.43  Score=21.75  Aligned_cols=24  Identities=25%  Similarity=0.443  Sum_probs=19.0

Q ss_pred             CCcccCCCCcccCCCHHHHHHHHH
Q psy12195        187 SKSYQCNECPESFERLNKLKRHKF  210 (254)
Q Consensus       187 ~~~~~C~~C~~~f~~~~~l~~H~~  210 (254)
                      .+-|.|+.|-|-..+...|.+|+.
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHH
Confidence            356888888888888888888875

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.35  E-value=0.15  Score=27.13  Aligned_cols=27  Identities=22%  Similarity=0.674  Sum_probs=21.8

Q ss_pred             cccccCCCcccCCChHHHHHHHhHhhC
Q psy12195        160 LMFTCRRCPSTFLNSATLSKHVKMEHN  186 (254)
Q Consensus       160 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  186 (254)
                      ..|+|..|+..|.+-..|..|+..|.+
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccH
Confidence            468888888888888888888888764

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.37  E-value=0.64  Score=21.19  Aligned_cols=24  Identities=17%  Similarity=0.336  Sum_probs=12.4

Q ss_pred             cccccccccccHHHHHhHHhhhcc
Q psy12195         77 ECNQCKEKTNDMTTMLNHYSVKHY  100 (254)
Q Consensus        77 ~C~~C~~~~~~~~~l~~h~~~~h~  100 (254)
                      .|-+|-+.|.+..++++|+..+|.
T Consensus         5 tclecmrtfkssfsiwrhqvevhn   28 (41)
T d1wjpa3           5 TCLECMRTFKSSFSIWRHQVEVHN   28 (41)
T ss_dssp             EEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             cHHHHHHHHHHHHHHHHhhheecc
Confidence            455555555555555555544443

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.08  E-value=1.9  Score=21.57  Aligned_cols=28  Identities=25%  Similarity=0.519  Sum_probs=15.3

Q ss_pred             CcccCCC--CcccCCCHHHHHHHHHHhhcC
Q psy12195        188 KSYQCNE--CPESFERLNKLKRHKFQAHND  215 (254)
Q Consensus       188 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  215 (254)
                      +||.|-.  |-.+|.-..+|.-|.+..|..
T Consensus        19 rpyrcvhqgc~aaftiq~nlilhy~avh~s   48 (61)
T d1x3ca1          19 RPYRCVHQGCFAAFTIQQNLILHYQAVHKS   48 (61)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSSS
T ss_pred             CceeeeccchhhhhhhhhhHHHHHHHHhhh
Confidence            4555532  555555555666665555544

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.90  E-value=0.31  Score=24.18  Aligned_cols=21  Identities=24%  Similarity=0.585  Sum_probs=16.5

Q ss_pred             CccCcchhhccCCchHHHHHH
Q psy12195        219 QIQCPYCITDFSEDKNLIQHI  239 (254)
Q Consensus       219 ~~~C~~C~~~f~~~~~l~~H~  239 (254)
                      +-.|++|+..++.+..++.|+
T Consensus         6 ~~eC~lC~vKYs~~~SvrdHi   26 (48)
T d2yrka1           6 KPECTLCGVKYSARLSIRDHI   26 (48)
T ss_dssp             CSCCTTTTCCCCSSSCHHHHH
T ss_pred             cccCcccceeeeeecchHhhh
Confidence            356888988888888887774

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.58  E-value=1  Score=22.58  Aligned_cols=32  Identities=28%  Similarity=0.496  Sum_probs=26.5

Q ss_pred             CCCccCcc--hhhccCCchHHHHHHHHhcCCCCC
Q psy12195        217 VHQIQCPY--CITDFSEDKNLIQHIVSVHLGKEG  248 (254)
Q Consensus       217 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~  248 (254)
                      -+||.|-.  |...|+...+|+.|.+.+|...-|
T Consensus        18 yrpyrcvhqgc~aaftiq~nlilhy~avh~s~lp   51 (61)
T d1x3ca1          18 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP   51 (61)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred             CCceeeeccchhhhhhhhhhHHHHHHHHhhhcCc
Confidence            46888966  999999999999999888865433

>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger domain-containing protein 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: CHY zinc finger-like
superfamily: CHY zinc finger-like
family: CHY zinc finger
domain: RING finger and CHY zinc finger domain-containing protein 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.33  E-value=0.65  Score=25.89  Aligned_cols=39  Identities=18%  Similarity=0.343  Sum_probs=23.8

Q ss_pred             eeecccccccCCCHH---HHHhhhcccccCcceeecCcCCccc
Q psy12195         15 IIRCETCTRNYESLE---SLTTHLSFKHSNQFLMKCTNCNVLV   54 (254)
Q Consensus        15 ~~~C~~C~~~f~~~~---~l~~H~~~~h~~~~~~~C~~C~~~~   54 (254)
                      .+.|+.||..+.-..   .|..|... ......+.|-.|+...
T Consensus        20 ~l~C~~Cg~~~~C~~C~~~lt~H~~~-~k~~~~l~CH~Cg~~~   61 (74)
T d2dkta1          20 LLKAPCCDKLYTCRLCHDTNEDHQLD-RFKVKEVQCINCEKLQ   61 (74)
T ss_dssp             EEEETTTTEEESSHHHHHHTSSSCCC-SSSCCCEEESSSCCEE
T ss_pred             EEEcCcCcCeeeCCCCCCcccccccc-cccCCEEEeccCCCcc
Confidence            356888888877553   33444322 2345668888887654