Psyllid ID: psy12196

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Protein Sequence
MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHcccccccccHHHHHHHHcccccccccccccccccEccccHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccHccccEccccHHHHHHHHccccccccccccHccccccccHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
mscvpcdvlfhNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTlmftcrrcpstflnsatLSKHVkmehnsksyqcnecpeSFERLNKLKRHkfqahndsvhqiqcpycitdfsedkNLIQHIVSVHlgkegtapart
Flexible Loop (DISEMBL)
MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVsvhlgkegtapart
Low Complexity Region (SEG)
MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART
Disordered region (IsUnstruct)
**CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSK**********************LNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHL**********
Disordered Region (DISOPRED)
MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP***
Disordered Region (DISEMBL)
MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART
Disordered Region (DISPRO)
MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGT*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPART
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	150	2.2.26 [Sep-21-2011]
Q9EQJ4	579	Zinc finger protein 384 O	yes	N/A	0.786	0.203	0.325	1e-11
Q8TF68	577	Zinc finger protein 384 O	yes	N/A	0.786	0.204	0.325	1e-11
Q13105	803	Zinc finger and BTB domai	no	N/A	0.893	0.166	0.272	7e-11
Q60821	794	Zinc finger and BTB domai	no	N/A	0.893	0.168	0.265	5e-10
Q9HAZ2	1276	PR domain zinc finger pro	no	N/A	0.86	0.101	0.297	5e-10
P17012	799	Zinc finger X-chromosomal	no	N/A	0.886	0.166	0.342	1e-09
P17010	805	Zinc finger X-chromosomal	no	N/A	0.886	0.165	0.342	1e-09
Q8TF45	676	Zinc finger protein 418 O	no	N/A	0.9	0.199	0.290	2e-09
Q95LI3	801	Zinc finger Y-chromosomal	no	N/A	0.886	0.166	0.342	2e-09
O62836	800	Zinc finger X-chromosomal	no	N/A	0.886	0.166	0.342	2e-09

>sp|Q9EQJ4|ZN384_RAT Zinc finger protein 384 OS=Rattus norvegicus GN=Znf384 PE=1 SV=1

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 221 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 280

Query: 82  NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 281 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 339

Query: 139 HLG 141
           H G
Sbjct: 340 HSG 342

Transcription factor that binds the consensus DNA sequence [GC]AAAAA. Seems to bind and regulate the promoters of MMP1, MMP3, MMP7 and COL1A1.
Rattus norvegicus (taxid: 10116)

>sp|Q8TF68|ZN384_HUMAN Zinc finger protein 384 OS=Homo sapiens GN=ZNF384 PE=1 SV=2

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 220 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 279

Query: 82  NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 280 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 338

Query: 139 HLG 141
           H G
Sbjct: 339 HSG 341

Transcription factor that binds the consensus DNA sequence [GC]AAAAA. Seems to bind and regulate the promoters of MMP1, MMP3, MMP7 and COL1A1.

Homo sapiens (taxid: 9606)

>sp|Q13105|ZBT17_HUMAN Zinc finger and BTB domain-containing protein 17 OS=Homo sapiens GN=ZBTB17 PE=1 SV=3

 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 13/147 (8%)

Query: 3   CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQ-THTLMFTCR 61
           C+ C   F +   L +H+ +         QC MC        SL+ H+ Q T    + C 
Sbjct: 504 CIHCQRQFADPGALQRHVRIH--TGEKPCQCVMCGKAFTQASSLIAHVRQHTGEKPYVCE 561

Query: 62  RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY- 120
           RC   F+ S+ L+ H++   N + ++C+ C ++F  +  L +H        +H  + PY 
Sbjct: 562 RCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHII------IHTGEKPYL 615

Query: 121 ---CITDFSEDKNLIQHIVSVHLGKEG 144
              C   F+   NL  H+ +VH GK G
Sbjct: 616 CDKCGRGFNRVDNLRSHVKTVHQGKAG 642

May function as a housekeeping DNA-binding protein that regulates the expression of specific genes. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Also has potent growth arrest activity, probably through inhibition of cell cycle progression. Required for early embryonic development during gastrulation.

Homo sapiens (taxid: 9606)

>sp|Q60821|ZBT17_MOUSE Zinc finger and BTB domain-containing protein 17 OS=Mus musculus GN=Zbtb17 PE=1 SV=2

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)

Query: 3   CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQ-THTLMFTCR 61
           C  C   F +   L +H+ +         QC +C        SL+ H+ Q T    + C 
Sbjct: 495 CTHCQRQFADPGALQRHVRIH--TGEKPCQCVICGKAFTQASSLIAHVRQHTGEKPYVCE 552

Query: 62  RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY- 120
           RC   F+ S+ L+ H++   N + ++C+ C ++F  +  L +H        +H  + PY 
Sbjct: 553 RCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHII------IHTGEKPYL 606

Query: 121 ---CITDFSEDKNLIQHIVSVHLGKEG 144
              C   F+   NL  H+ +VH GK G
Sbjct: 607 CDKCGRGFNRVDNLRSHVKTVHQGKAG 633

May function as a housekeeping DNA-binding protein that regulates the expression of specific genes. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Also has potent growth arrest activity, probably through inhibition of cell cycle progression (By similarity). Required for early embryonic development during gastrulation.

Mus musculus (taxid: 10090)

>sp|Q9HAZ2|PRD16_HUMAN PR domain zinc finger protein 16 OS=Homo sapiens GN=PRDM16 PE=1 SV=3

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 12/141 (8%)

Query: 3   CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDS--KESLVTHISQTHTLMFTC 60
           C  CD LF +K  L +H     K T  S+   +   + +    E L     Q H     C
Sbjct: 232 CDECDELFQSKLDLRRH----KKYTCGSVGAALYEGLAEELKPEGLGGGSGQAHE----C 283

Query: 61  RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY 120
           + C   F N  +L +H+ +    + Y+C++CP++F   + L RH  Q  +DS  + +C  
Sbjct: 284 KDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSNLIRH--QMSHDSGKRFECEN 341

Query: 121 CITDFSEDKNLIQHIVSVHLG 141
           C+  F++  NL +HI S H+G
Sbjct: 342 CVKVFTDPSNLQRHIRSQHVG 362

Binds DNA and functions as a transcriptional regulator. Functions in the differentiation of brown adipose tissue (BAT) which is specialized in dissipating chemical energy in the form of heat in response to cold or excess feeding while white adipose tissue (WAT) is specialized in the storage of excess energy and the control of systemic metabolism. Together with CEBPB, regulates the differentiation of myoblastic precursors into brown adipose cells. Functions also as a repressor of TGF-beta signaling. Isoform 4 may regulate granulocytes differentiation.

Homo sapiens (taxid: 9606)

>sp|P17012|ZFX_MOUSE Zinc finger X-chromosomal protein OS=Mus musculus GN=Zfx PE=1 SV=2

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 58/140 (41%), Gaps = 7/140 (5%)

Query: 3   CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTC 60
           C  CD  FH  + L KH+   HK   +  QC  C   +     L  HI   HT  L F C
Sbjct: 658 CDMCDKGFHRPSELKKHVAA-HKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRC 715

Query: 61  RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAH-NDSVHQIQCP 119
           +RC   F   + L KH+K     K YQC  C  S    +  KRH    H  D  H  +C 
Sbjct: 716 KRCRKGFRQQSELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPH--RCE 773

Query: 120 YCITDFSEDKNLIQHIVSVH 139
           YC   F       QHI+  H
Sbjct: 774 YCKKGFRRPSEKNQHIMRHH 793

Probable transcriptional activator.

Mus musculus (taxid: 10090)

>sp|P17010|ZFX_HUMAN Zinc finger X-chromosomal protein OS=Homo sapiens GN=ZFX PE=2 SV=2

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 58/140 (41%), Gaps = 7/140 (5%)

Query: 3   CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTC 60
           C  CD  FH  + L KH+   HK   +  QC  C   +     L  HI   HT  L F C
Sbjct: 664 CDMCDKGFHRPSELKKHVAA-HKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRC 721

Query: 61  RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAH-NDSVHQIQCP 119
           +RC   F   + L KH+K     K YQC  C  S    +  KRH    H  D  H  +C 
Sbjct: 722 KRCRKGFRQQSELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPH--RCE 779

Query: 120 YCITDFSEDKNLIQHIVSVH 139
           YC   F       QHI+  H
Sbjct: 780 YCKKGFRRPSEKNQHIMRHH 799

Probable transcriptional activator.

Homo sapiens (taxid: 9606)

>sp|Q8TF45|ZN418_HUMAN Zinc finger protein 418 OS=Homo sapiens GN=ZNF418 PE=1 SV=2

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 57/141 (40%), Gaps = 6/141 (4%)

Query: 3   CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTH-ISQTHTLMFTCR 61
           C  C   F    TL KH  +         +C  C      K +L+ H    T    + C 
Sbjct: 316 CGECGKSFSQNGTLIKHQRVH--TGERPYECEECGKCFTQKGNLIQHQRGHTSERPYECE 373

Query: 62  RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC 121
            C   F    TL++H ++    + Y+C EC +SF R   L+ H  Q  +      +C  C
Sbjct: 374 ECGKCFSQKGTLTEHHRVHTRERPYECGECGKSFSRKGHLRNH--QRGHTGERPYECGEC 431

Query: 122 ITDFSEDKNLIQHIVSVHLGK 142
              FS   NLIQH  S H G+
Sbjct: 432 GKSFSRKGNLIQHQRS-HTGE 451

Transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|Q95LI3|ZFY_BOVIN Zinc finger Y-chromosomal protein OS=Bos taurus GN=ZFY PE=2 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 56/140 (40%), Gaps = 7/140 (5%)

Query: 3   CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTC 60
           C  CD  FH  + L KH+   HK   +  QC  C   +     L  HI   HT  L F C
Sbjct: 660 CDMCDKGFHRPSELKKHVAA-HKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRC 717

Query: 61  RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAH-NDSVHQIQCP 119
           +RC   F     L KH+K     K YQC  C  S    +  KRH    H  D  H  +C 
Sbjct: 718 KRCKKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPH--RCE 775

Query: 120 YCITDFSEDKNLIQHIVSVH 139
           YC   F       QHI   H
Sbjct: 776 YCKKGFRRPSEKNQHITRHH 795

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Bos taurus (taxid: 9913)

>sp|O62836|ZFX_BOVIN Zinc finger X-chromosomal protein OS=Bos taurus GN=ZFX PE=2 SV=2

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 57/140 (40%), Gaps = 7/140 (5%)

Query: 3   CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTC 60
           C  CD  FH  + L KH+   HK   +  QC  C   +     L  HI   HT  L F C
Sbjct: 659 CDMCDKGFHRPSELKKHVAA-HKGKKMH-QCRHCDFKIADPFVLSRHILSVHTKDLPFRC 716

Query: 61  RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAH-NDSVHQIQCP 119
           +RC   F     L KH+K     K YQC  C  S    +  KRH    H  D  H  +C 
Sbjct: 717 KRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPH--RCE 774

Query: 120 YCITDFSEDKNLIQHIVSVH 139
           YC   F       QHI+  H
Sbjct: 775 YCKKGFRRPSEKNQHIMRHH 794

Probable transcriptional activator.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
158296910	966	AGAP008232-PA [Anopheles gambiae str. PE	0.866	0.134	0.296	8e-11
432111846	645	Zinc finger protein 384 [Myotis davidii]	0.786	0.182	0.325	4e-10
74192453	221	unnamed protein product [Mus musculus]	0.786	0.533	0.325	5e-10
354467295	581	PREDICTED: zinc finger protein 384-like	0.786	0.203	0.325	6e-10
348554974	581	PREDICTED: zinc finger protein 384-like	0.786	0.203	0.325	6e-10
77812688	581	zinc finger protein 384 isoform 1 [Rattu	0.786	0.203	0.325	6e-10
30921314	579	RecName: Full=Zinc finger protein 384; A	0.786	0.203	0.325	6e-10
126352391	584	zinc finger protein 384 isoform 1 [Mus m	0.786	0.202	0.325	6e-10
39793889	588	Zfp384 protein [Mus musculus]	0.786	0.200	0.325	6e-10
334324906	1487	PREDICTED: zinc finger protein 208-like	0.913	0.092	0.344	6e-10

>gi|158296910|ref|XP_317239.4| AGAP008232-PA [Anopheles gambiae str. PEST] gi|157014939|gb|EAA43874.4| AGAP008232-PA [Anopheles gambiae str. PEST]

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 3   CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLM--FTC 60
           CV CD   H+   L  HL + H     + +C +C      + SL+ H +  H  +  F C
Sbjct: 215 CVVCDRQCHDIDQLDDHLVISHHYPKDAYRCELCPRAYSYRPSLLRHRAIVHGELRRFPC 274

Query: 61  RRCPSTFLNSATLSKHVKMEH-NSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP 119
             CP  F + + L +H++  H  ++S+ C EC ++F   + LK+H    H+ SV   QC 
Sbjct: 275 ENCPKVFTDPSNLQRHIRTHHVGARSHACPECGKTFATSSGLKQHT-HIHS-SVKPFQCE 332

Query: 120 YCITDFSEDKNLIQH 134
            C   +++  NL +H
Sbjct: 333 VCFKSYTQFSNLCRH 347

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432111846|gb|ELK34888.1| Zinc finger protein 384 [Myotis davidii]

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 328 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 387

Query: 82  NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 388 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKSFANTSYLAQHL-RI 446

Query: 139 HLG 141
           H G
Sbjct: 447 HSG 449

Source: Myotis davidii

Species: Myotis davidii

Genus: Myotis

Family: Vespertilionidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|74192453|dbj|BAE43028.1| unnamed protein product [Mus musculus]

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 76  DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 135

Query: 82  NSKSYQCNECPESFERLNKLKRHKF---QAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 136 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 194

Query: 139 HLG 141
           H G
Sbjct: 195 HSG 197

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|354467295|ref|XP_003496105.1| PREDICTED: zinc finger protein 384-like [Cricetulus griseus]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 220 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 279

Query: 82  NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 280 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 338

Query: 139 HLG 141
           H G
Sbjct: 339 HSG 341

Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348554974|ref|XP_003463299.1| PREDICTED: zinc finger protein 384-like isoform 1 [Cavia porcellus]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 222 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 281

Query: 82  NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 282 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 340

Query: 139 HLG 141
           H G
Sbjct: 341 HSG 343

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|77812688|ref|NP_596920.2| zinc finger protein 384 isoform 1 [Rattus norvegicus] gi|77812690|ref|NP_001030002.1| zinc finger protein 384 isoform 1 [Rattus norvegicus] gi|149049438|gb|EDM01892.1| zinc finger protein 384, isoform CRA_c [Rattus norvegicus] gi|149049439|gb|EDM01893.1| zinc finger protein 384, isoform CRA_c [Rattus norvegicus]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 221 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 280

Query: 82  NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 281 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 339

Query: 139 HLG 141
           H G
Sbjct: 340 HSG 342

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|30921314|sp|Q9EQJ4.1|ZN384_RAT RecName: Full=Zinc finger protein 384; AltName: Full=Cas-associated zinc finger protein; AltName: Full=Nuclear matrix transcription factor 4; Short=Nuclear matrix protein 4 gi|11870000|gb|AAG40582.1|AF216804_1 nuclear matrix transcription factor [Rattus norvegicus]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 221 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 280

Query: 82  NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 281 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 339

Query: 139 HLG 141
           H G
Sbjct: 340 HSG 342

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|126352391|ref|NP_780766.3| zinc finger protein 384 isoform 1 [Mus musculus]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 221 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 280

Query: 82  NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 281 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 339

Query: 139 HLG 141
           H G
Sbjct: 340 HSG 342

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|39793889|gb|AAH64013.1| Zfp384 protein [Mus musculus]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
           +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct: 221 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 280

Query: 82  NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
            +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct: 281 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 339

Query: 139 HLG 141
           H G
Sbjct: 340 HSG 342

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334324906|ref|XP_001374944.2| PREDICTED: zinc finger protein 208-like [Monodelphis domestica]

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 1    MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLM--F 58
              C  C   F  KA L  H    H A  L  +CN C      K  L+ H  +TH  M  F
Sbjct: 936  FECNVCRKAFSQKAHLISHQRT-HSAVKL-FECNECGETFKEKNRLIAH-HKTHPGMKPF 992

Query: 59   TCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC 118
            +C  C  TF  S  L KH K+    KS+ CN+C ++F++   L  HK + H +   + +C
Sbjct: 993  SCTECKETFSESKELKKHQKIHAGEKSFDCNQCTKTFDKKEHLVAHK-KIHTEEK-RFEC 1050

Query: 119  PYCITDFSEDKNLIQHIVSVHLGKE 143
              C   FS  +NL +H V +H GK+
Sbjct: 1051 GECGKRFSRKENLFRHQV-IHTGKK 1074

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
UNIPROTKB|F1SL43	573	ZNF384 "Uncharacterized protei	0.786	0.205	0.325	5.9e-16
UNIPROTKB|F1PI62	575	ZNF384 "Uncharacterized protei	0.786	0.205	0.325	5.9e-16
UNIPROTKB|Q8TF68	577	ZNF384 "Zinc finger protein 38	0.786	0.204	0.325	5.9e-16
RGD|708346	579	Zfp384 "zinc finger protein 38	0.786	0.203	0.325	6e-16
UNIPROTKB|G3V9M5	581	Zfp384 "Protein Zfp384" [Rattu	0.786	0.203	0.325	6e-16
UNIPROTKB|F1MGZ7	575	ZNF384 "Uncharacterized protei	0.786	0.205	0.325	9.7e-16
ZFIN|ZDB-GENE-080218-22	324	zgc:174708 "zgc:174708" [Danio	0.913	0.422	0.300	8.3e-15
ZFIN|ZDB-GENE-110914-41	573	si:dkey-233e3.3 "si:dkey-233e3	0.913	0.239	0.307	1.2e-14
UNIPROTKB|F1NBG4	394	ZFX "Uncharacterized protein"	0.886	0.337	0.35	1.7e-14
UNIPROTKB|H0Y6X2	241	ZBTB17 "Zinc finger and BTB do	0.913	0.568	0.284	2.3e-14

UNIPROTKB|F1SL43 ZNF384 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 208 (78.3 bits), Expect = 5.9e-16, P = 5.9e-16
 Identities = 40/123 (32%), Positives = 66/123 (53%)

Query:    23 EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
             +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct:   226 DHQKDGKTYRCRMCSLTFFSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 285

Query:    82 NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
              +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct:   286 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 344

Query:   139 HLG 141
             H G
Sbjct:   345 HSG 347

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1PI62 ZNF384 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 208 (78.3 bits), Expect = 5.9e-16, P = 5.9e-16
 Identities = 40/123 (32%), Positives = 66/123 (53%)

Query:    23 EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
             +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct:   220 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 279

Query:    82 NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
              +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct:   280 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 338

Query:   139 HLG 141
             H G
Sbjct:   339 HSG 341

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q8TF68 ZNF384 "Zinc finger protein 384" [Homo sapiens (taxid:9606)]

 Score = 208 (78.3 bits), Expect = 5.9e-16, P = 5.9e-16
 Identities = 40/123 (32%), Positives = 66/123 (53%)

Query:    23 EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
             +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct:   220 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 279

Query:    82 NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
              +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct:   280 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 338

Query:   139 HLG 141
             H G
Sbjct:   339 HSG 341

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0006913 "nucleocytoplasmic transport" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0050714 "positive regulation of protein secretion" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

RGD|708346 Zfp384 "zinc finger protein 384" [Rattus norvegicus (taxid:10116)]

 Score = 208 (78.3 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/123 (32%), Positives = 66/123 (53%)

Query:    23 EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
             +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct:   221 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 280

Query:    82 NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
              +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct:   281 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 339

Query:   139 HLG 141
             H G
Sbjct:   340 HSG 342

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005925 "focal adhesion" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006913 "nucleocytoplasmic transport" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0050714 "positive regulation of protein secretion" evidence=IDA

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|G3V9M5 Zfp384 "Protein Zfp384" [Rattus norvegicus (taxid:10116)]

 Score = 208 (78.3 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 40/123 (32%), Positives = 66/123 (53%)

Query:    23 EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
             +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct:   221 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 280

Query:    82 NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
              +K Y CN C +SF +L+ L++H     + H +++   +CP+C   F+    L QH+  +
Sbjct:   281 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHL-RI 339

Query:   139 HLG 141
             H G
Sbjct:   340 HSG 342

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MGZ7 ZNF384 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 206 (77.6 bits), Expect = 9.7e-16, P = 9.7e-16
 Identities = 40/123 (32%), Positives = 65/123 (52%)

Query:    23 EHKATSLSIQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEH 81
             +H+    + +C MCSL   SK  +  H  S T T    C  C  TF NS+ L++H+++  
Sbjct:   222 DHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHS 281

Query:    82 NSKSYQCNECPESFERLNKLKRHK---FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV 138
              +K Y CN C +SF +L+ L++H     + H + +   +CP+C   F+    L QH+  +
Sbjct:   282 GAKPYSCNFCEKSFRQLSHLQQHTRIHSKVHTEIIKPHKCPHCSKTFANTSYLAQHL-RI 340

Query:   139 HLG 141
             H G
Sbjct:   341 HSG 343

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-080218-22 zgc:174708 "zgc:174708" [Danio rerio (taxid:7955)]

 Score = 191 (72.3 bits), Expect = 8.3e-15, P = 8.3e-15
 Identities = 43/143 (30%), Positives = 68/143 (47%)

Query:     2 SCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHIS-QTHTLMFTC 60
             +C  C   F+  A LYKH+ + H        CN C      K +L  H+   T    F C
Sbjct:    95 TCTQCGKSFNCSANLYKHMRI-HTGEK-PFTCNQCGKSFSQKSNLNLHMRIHTRKKPFKC 152

Query:    61 RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY 120
              +C  +F  S+ L KH+K+    KS++C +C +SF R + L +H  + H        C  
Sbjct:   153 TQCGKSFNRSSDLYKHMKIHTGEKSFKCTQCGKSFNRSSNLHQH-MRIHTVE-KPFTCTQ 210

Query:   121 CITDFSEDKNLIQHIVSVHLGKE 143
             C   F+   NL +H++ +H G++
Sbjct:   211 CGKSFNFSSNLHRHMM-IHTGEK 232

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-110914-41 si:dkey-233e3.3 "si:dkey-233e3.3" [Danio rerio (taxid:7955)]

 Score = 196 (74.1 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 44/143 (30%), Positives = 68/143 (47%)

Query:     2 SCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHIS-QTHTLMFTC 60
             +C  C   F  K +L KH  + H        C  C     +K SL+ H+   T T++FTC
Sbjct:   212 TCTECGKSFPYKGSL-KHHMISHSGEK-PFACAQCGKSFTTKASLMNHMDGHTGTIVFTC 269

Query:    61 RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY 120
              RC  TF    ++ +H+K        +C+EC + F+  +KLK H  + HN       C  
Sbjct:   270 DRCGKTFTRKDSMKQHMKTHSGEDRLRCSECGKGFKYRSKLKIH-MRIHNRE-KLFTCTQ 327

Query:   121 CITDFSEDKNLIQHIVSVHLGKE 143
             C  +F +  NL QH+  +H G++
Sbjct:   328 CGKNFDQSSNLNQHM-RIHTGEK 349

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1NBG4 ZFX "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 191 (72.3 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 49/140 (35%), Positives = 57/140 (40%)

Query:     3 CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTC 60
             C  CD  FH  + L KH+   HK   L  QC  C   +     L  HI   HT  L F C
Sbjct:   253 CDMCDKGFHRPSELKKHV-AAHKGKKLH-QCRHCDFKIADPFILSRHILSVHTKDLPFRC 310

Query:    61 RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCP 119
             +RC   F     L KH+K     K YQC  C  S    +  KRH    H  D  H+  C 
Sbjct:   311 KRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHR--CE 368

Query:   120 YCITDFSEDKNLIQHIVSVH 139
             YC   F       QHI+  H
Sbjct:   369 YCKKGFRRPSEKNQHIMRHH 388

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H0Y6X2 ZBTB17 "Zinc finger and BTB domain-containing protein 17" [Homo sapiens (taxid:9606)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 41/144 (28%), Positives = 66/144 (45%)

Query:     3 CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTC 60
             C+ C   F +   L +H+ + H       QC MC        SL+ H+ Q HT    + C
Sbjct:    61 CIHCQRQFADPGALQRHVRI-HTGEK-PCQCVMCGKAFTQASSLIAHVRQ-HTGEKPYVC 117

Query:    61 RRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY 120
              RC   F+ S+ L+ H++   N + ++C+ C ++F  +  L +H    H      + C  
Sbjct:   118 ERCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHII-IHTGEKPYL-CDK 175

Query:   121 CITDFSEDKNLIQHIVSVHLGKEG 144
             C   F+   NL  H+ +VH GK G
Sbjct:   176 CGRGFNRVDNLRSHVKTVHQGKAG 199

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	150
KOG2462|consensus	279		100.0
KOG2462|consensus	279		99.96
KOG3608|consensus	467		99.84
KOG3608|consensus	467		99.82
KOG1074|consensus	958		99.82
KOG3576|consensus	267		99.8
KOG1074|consensus	958		99.78
KOG3623|consensus	1007		99.72
KOG3623|consensus	1007		99.66
KOG3576|consensus	267		99.65
PLN03086	567	PRLI-interacting factor K; Provisional	99.39
PHA00733	128	hypothetical protein	99.35
PHA00733	128	hypothetical protein	99.16
PLN03086	567	PRLI-interacting factor K; Provisional	99.13
PHA02768	55	hypothetical protein; Provisional	99.11
PHA02768	55	hypothetical protein; Provisional	99.11
PHA00616	44	hypothetical protein	99.04
KOG3993|consensus	500		98.88
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.83
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.75
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.72
KOG3993|consensus	500		98.68
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.65
PHA00616	44	hypothetical protein	98.64
PHA00732	79	hypothetical protein	98.58
PHA00732	79	hypothetical protein	98.46
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.42
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.3
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.23
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.19
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.11
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.08
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	98.05
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.99
smart00355	26	ZnF_C2H2 zinc finger.	97.78
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.71
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.69
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.65
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.57
smart00355	26	ZnF_C2H2 zinc finger.	97.56
KOG2231|consensus	669		97.43
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.4
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.35
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.32
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.94
PRK04860	160	hypothetical protein; Provisional	96.94
PRK04860	160	hypothetical protein; Provisional	96.93
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.77
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.6
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.23
KOG1146|consensus	1406		96.12
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.74
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.62
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	95.45
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.9
KOG2482|consensus	423		94.77
KOG1146|consensus	1406		94.6
COG4049	65	Uncharacterized protein containing archaeal-type C	94.54
KOG2231|consensus	669		93.53
KOG2893|consensus	341		93.07
KOG4173|consensus	253		92.48
KOG2482|consensus	423		92.08
KOG2186|consensus	276		91.54
KOG4173|consensus	253		91.18
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	91.1
COG4049	65	Uncharacterized protein containing archaeal-type C	91.05
COG5048	467	FOG: Zn-finger [General function prediction only]	90.77
PF12907	40	zf-met2: Zinc-binding	90.16
KOG2893|consensus	341		89.99
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	89.88
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.7
COG1592	166	Rubrerythrin [Energy production and conversion]	89.64
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	89.59
PF15269	54	zf-C2H2_7: Zinc-finger	89.55
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	89.39
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	89.36
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.16
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	88.72
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.72
COG5236	493	Uncharacterized conserved protein, contains RING Z	88.71
PHA00626	59	hypothetical protein	88.62
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	88.6
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	88.54
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	88.31
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	87.71
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	87.25
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	86.92
COG5048	467	FOG: Zn-finger [General function prediction only]	86.31
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	86.12
KOG2186|consensus	276		85.87
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	85.8
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	85.79
PRK06266	178	transcription initiation factor E subunit alpha; V	83.9
PF09723	42	Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134	83.86
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	83.11
smart00531	147	TFIIE Transcription initiation factor IIE.	82.08
PF04780	466	DUF629: Protein of unknown function (DUF629); Inte	81.7
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	81.12
PF14353	128	CpXC: CpXC protein	81.06
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	80.61
KOG2785|consensus	390		80.6

>KOG2462|consensus

Probab=100.00  E-value=4.5e-36  Score=185.49  Aligned_cols=138  Identities=25%  Similarity=0.485  Sum_probs=128.9

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhh-CCCcceecccccccccChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHK-ATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKM   79 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~-~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~   79 (150)
                      |+|+.||+.+.+.++|.+|...|-. ...+.+.|+.|++.+.....|..|+ ++|..+++|.+||++|...+.|+-|+++
T Consensus       131 ~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHi-rTH~l~c~C~iCGKaFSRPWLLQGHiRT  209 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHI-RTHTLPCECGICGKAFSRPWLLQGHIRT  209 (279)
T ss_pred             eeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHh-hccCCCcccccccccccchHHhhccccc
Confidence            6899999999999999999988543 3467789999999999999999999 9999999999999999999999999999


Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      |+|||||.|..|++.|..+++|+.|+++|.+.+  +|+|..|+|.|...+.|.+|.++--..
T Consensus       210 HTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K--~~qC~~C~KsFsl~SyLnKH~ES~C~~  269 (279)
T KOG2462|consen  210 HTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVK--KHQCPRCGKSFALKSYLNKHSESACLK  269 (279)
T ss_pred             ccCCCCccCCcccchhcchHHHHHHHHhhcCCc--cccCcchhhHHHHHHHHHHhhhhcccc
Confidence            999999999999999999999999999999988  999999999999999999999876433

>KOG2462|consensus

Probab=99.96  E-value=2.8e-29  Score=155.51  Aligned_cols=116  Identities=21%  Similarity=0.454  Sum_probs=107.7

Q ss_pred             cceecccccccccChHHHHHHHhccC----CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhH
Q psy12196         29 LSIQCNMCSLVLDSKESLVTHISQTH----TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRH  104 (150)
Q Consensus        29 ~~~~c~~c~~~f~~~~~l~~h~~~~~----~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h  104 (150)
                      ..|+|+.|++.+.+.++|..|.+.+.    .+.+.|..|++.|.+...|..|+++|+  -+.+|.+||+.|...|-|+.|
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcc
Confidence            44899999999999999999974433    278999999999999999999999998  568999999999999999999


Q ss_pred             HhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        105 KFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       105 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      +++|+||+  ||.|+.|+|+|.++++|+.||++|.+.|.|+|+.
T Consensus       207 iRTHTGEK--PF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~  248 (279)
T KOG2462|consen  207 IRTHTGEK--PFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPR  248 (279)
T ss_pred             cccccCCC--CccCCcccchhcchHHHHHHHHhhcCCccccCcc
Confidence            99999999  9999999999999999999999999999999974

>KOG3608|consensus

Probab=99.84  E-value=8.9e-21  Score=121.68  Aligned_cols=105  Identities=26%  Similarity=0.566  Sum_probs=50.8

Q ss_pred             CCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHh-hc
Q psy12196          3 CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKM-EH   81 (150)
Q Consensus         3 C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~-~~   81 (150)
                      |+.||..|.+...|..|++..+.....+|+|..|.+.|..+..|..|+ ..|...|+|+.|+......++|..|++. |.
T Consensus       210 Cp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv-~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs  288 (467)
T KOG3608|consen  210 CPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHV-VRHVNCYKCPLCDMTCSSASSLTTHIRYRHS  288 (467)
T ss_pred             cchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHH-HHhhhcccccccccCCCChHHHHHHHHhhhc
Confidence            444444444444444444443333333444444444444444444444 3334445555555555555555555543 44


Q ss_pred             CCCcccCCCChhhhcchhHHhhHHhhh
Q psy12196         82 NSKSYQCNECPESFERLNKLKRHKFQA  108 (150)
Q Consensus        82 ~~~~~~c~~c~~~~~~~~~l~~h~~~~  108 (150)
                      ..+||+|..|++.+...++|.+|...|
T Consensus       289 ~dkpfKCd~Cd~~c~~esdL~kH~~~H  315 (467)
T KOG3608|consen  289 KDKPFKCDECDTRCVRESDLAKHVQVH  315 (467)
T ss_pred             cCCCccccchhhhhccHHHHHHHHHhc
Confidence            455555555555555555555555443

>KOG3608|consensus

Probab=99.82  E-value=5.5e-20  Score=118.11  Aligned_cols=139  Identities=27%  Similarity=0.525  Sum_probs=123.8

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhccC--CcccccCCCCcccCChHHHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTH--TLMFTCRRCPSTFLNSATLSKHVK   78 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~--~~~~~c~~c~~~f~~~~~l~~h~~   78 (150)
                      |+|..|.+.|.+...|..|+.. |.   ..|+|+.|+.+.+..++|..|+.-.|  .+||+|..|++.+.+...|..|..
T Consensus       238 fqC~~C~KrFaTeklL~~Hv~r-Hv---n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~  313 (467)
T KOG3608|consen  238 FQCAQCFKRFATEKLLKSHVVR-HV---NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ  313 (467)
T ss_pred             hHHHHHHHHHhHHHHHHHHHHH-hh---hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH
Confidence            6899999999999999999887 43   34899999999999999999985433  499999999999999999999999


Q ss_pred             hhcCCCcccCCC--ChhhhcchhHHhhHHhhhc-CCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196         79 MEHNSKSYQCNE--CPESFERLNKLKRHKFQAH-NDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus        79 ~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      .|. +..|.|..  |..++.+...+++|++.++ +..+-+|.|-.|++.|++--+|.+|+...|+-+..
T Consensus       314 ~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~P  381 (467)
T KOG3608|consen  314 VHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLP  381 (467)
T ss_pred             hcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCC
Confidence            887 67799988  9999999999999998876 66667899999999999999999999988876654

>KOG1074|consensus

Probab=99.82  E-value=9.2e-22  Score=137.65  Aligned_cols=53  Identities=25%  Similarity=0.468  Sum_probs=45.5

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhccCC
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT   55 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~   55 (150)
                      .+|.+|.+.|...+.|+.|.+.|+  ++.+|+|..|+..|+.+.+|..|.+++++
T Consensus       354 hkCr~CakvfgS~SaLqiHlRSHT--GERPfqCnvCG~~FSTkGNLKvH~~rH~e  406 (958)
T KOG1074|consen  354 HKCRFCAKVFGSDSALQIHLRSHT--GERPFQCNVCGNRFSTKGNLKVHFQRHRE  406 (958)
T ss_pred             chhhhhHhhcCchhhhhhhhhccC--CCCCeeecccccccccccceeeeeeeccc
Confidence            369999999999999999999844  67789999999999999999998755443

>KOG3576|consensus

Probab=99.80  E-value=5e-20  Score=110.03  Aligned_cols=116  Identities=19%  Similarity=0.368  Sum_probs=102.0

Q ss_pred             CcceecccccccccChHHHHHHHhccCC--cccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHH
Q psy12196         28 SLSIQCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHK  105 (150)
Q Consensus        28 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~--~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~  105 (150)
                      ...+.|..|++.|..-.-|.+|+ ..|.  +.+.|..||+.|.+.-+|.+|+++|+|.+||+|..|++.|.+...|..|.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~-kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHL-KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHh-hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            34589999999999888888898 4443  78899999999999999999999999999999999999999999999998


Q ss_pred             hhhcCC---------CCCCcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196        106 FQAHND---------SVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus       106 ~~~~~~---------~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      ...++.         +.+.|.|..||..-.....+..|++.+|+..|+
T Consensus       194 ~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  194 KKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            876653         345799999999999999999999999976653

>KOG1074|consensus

Probab=99.78  E-value=5.9e-20  Score=128.77  Aligned_cols=77  Identities=25%  Similarity=0.608  Sum_probs=66.2

Q ss_pred             CCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhccCC------cccccC---CCCcccCChHH
Q psy12196          2 SCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT------LMFTCR---RCPSTFLNSAT   72 (150)
Q Consensus         2 ~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~------~~~~c~---~c~~~f~~~~~   72 (150)
                      +|-.|-+.++..+.|+.|.+. |. ++.+|+|..|++.|..+.+|..|+ ..|.      ..+.|+   +|-+.|.+...
T Consensus       607 qCiiC~rVlSC~saLqmHyrt-Ht-GERPFkCKiCgRAFtTkGNLkaH~-~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRT-HT-GERPFKCKICGRAFTTKGNLKAHM-SVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             ceeeeeecccchhhhhhhhhc-cc-CcCccccccccchhccccchhhcc-cccccCccccccccCCchhhhccccccccc
Confidence            577899999999999999888 44 677899999999999999999998 4443      568899   89999999999


Q ss_pred             HHHHHHhhc
Q psy12196         73 LSKHVKMEH   81 (150)
Q Consensus        73 l~~h~~~~~   81 (150)
                      |..|++.|.
T Consensus       684 lpQhIriH~  692 (958)
T KOG1074|consen  684 LPQHIRIHL  692 (958)
T ss_pred             ccceEEeec
Confidence            999988886

>KOG3623|consensus

Probab=99.72  E-value=2.1e-18  Score=119.82  Aligned_cols=105  Identities=21%  Similarity=0.530  Sum_probs=85.6

Q ss_pred             CCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhccCC--------------cccccCCCCccc
Q psy12196          2 SCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHT--------------LMFTCRRCPSTF   67 (150)
Q Consensus         2 ~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~--------------~~~~c~~c~~~f   67 (150)
                      .|++|+..+.....|+.|++..|...+..|.|..|..+|.....|.+|++.+..              +.|+|.+|+++|
T Consensus       212 tcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAF  291 (1007)
T KOG3623|consen  212 TCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAF  291 (1007)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhh
Confidence            688999999999999999988777666678899999999999999888732211              568888888888


Q ss_pred             CChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHh
Q psy12196         68 LNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKF  106 (150)
Q Consensus        68 ~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~  106 (150)
                      ..+.-|.-|+++|.|+|||.|..|++.|.....+..|+.
T Consensus       292 KfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  292 KFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            888888888888888888888888888888888777754

>KOG3623|consensus

Probab=99.66  E-value=3.1e-17  Score=114.17  Aligned_cols=79  Identities=27%  Similarity=0.615  Sum_probs=76.5

Q ss_pred             CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHH
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQH  134 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  134 (150)
                      ...|.|..|+++|.-..+|.+|...|+|.+||.|.+|.+.|...-.|.-|++.|.|++  ||+|..|+|.|...+++..|
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEK--PfQCdKClKRFSHSGSYSQH  969 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEK--PFQCDKCLKRFSHSGSYSQH  969 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCC--cchhhhhhhhcccccchHhh
Confidence            3689999999999999999999999999999999999999999999999999999998  99999999999999999999


Q ss_pred             H
Q psy12196        135 I  135 (150)
Q Consensus       135 ~  135 (150)
                      |
T Consensus       970 M  970 (1007)
T KOG3623|consen  970 M  970 (1007)
T ss_pred             h
Confidence            8

>KOG3576|consensus

Probab=99.65  E-value=2.2e-17  Score=98.80  Aligned_cols=85  Identities=28%  Similarity=0.474  Sum_probs=80.5

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHH
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHI  135 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  135 (150)
                      ..|.|.+|++.|..-..|.+|++.|...+.+.|..||+.|...-+|.+|.++|++.+  ||+|..|+|+|+...+|..|+
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvr--pykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVR--PYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCcc--ccchhhhhHHHHhhccHHHHH
Confidence            568999999999999999999999999999999999999999999999999999988  999999999999999999999


Q ss_pred             HHhcCCC
Q psy12196        136 VSVHLGK  142 (150)
Q Consensus       136 ~~~~~~~  142 (150)
                      +..||..
T Consensus       194 ~kvhgv~  200 (267)
T KOG3576|consen  194 KKVHGVQ  200 (267)
T ss_pred             HHHcCch
Confidence            9888643

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.39  E-value=9.4e-13  Score=91.48  Aligned_cols=104  Identities=15%  Similarity=0.373  Sum_probs=83.1

Q ss_pred             ceecccccccccChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhc----------chh
Q psy12196         30 SIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFE----------RLN   99 (150)
Q Consensus        30 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~----------~~~   99 (150)
                      .+.|+.|++.|. ...+..|+... ..++.|+ |+..+ ....|..|+..|.+.+++.|..|+..+.          ..+
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~-Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s  528 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVF-HEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLR  528 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhc-CCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhh
Confidence            357999999986 57788997444 4889999 99655 6688999999999999999999998884          235


Q ss_pred             HHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        100 KLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       100 ~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      .|..|.... +.+  ++.|..|++.+..+ ++..|+...|..
T Consensus       529 ~Lt~HE~~C-G~r--t~~C~~Cgk~Vrlr-dm~~H~~~~h~~  566 (567)
T PLN03086        529 GMSEHESIC-GSR--TAPCDSCGRSVMLK-EMDIHQIAVHQK  566 (567)
T ss_pred             hHHHHHHhc-CCc--ceEccccCCeeeeh-hHHHHHHHhhcC
Confidence            788888763 555  88999999998885 688898877753

>PHA00733 hypothetical protein

Probab=99.35  E-value=7.9e-13  Score=75.95  Aligned_cols=84  Identities=18%  Similarity=0.330  Sum_probs=67.0

Q ss_pred             cCCcccccCCCCcccCChHHHHHH--H---HhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccC
Q psy12196         53 THTLMFTCRRCPSTFLNSATLSKH--V---KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSE  127 (150)
Q Consensus        53 ~~~~~~~c~~c~~~f~~~~~l~~h--~---~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~  127 (150)
                      ...+++.|.+|...|..+..|..+  +   ..+.+.++|.|..||+.|...+.|..|++.+  +.  +|.|+.|+++|..
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~--~~~C~~CgK~F~~  111 (128)
T PHA00733         36 PEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EH--SKVCPVCGKEFRN  111 (128)
T ss_pred             hhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--Cc--CccCCCCCCccCC
Confidence            334778888888887777666554  1   1334578999999999999999999998754  33  7899999999999


Q ss_pred             chHHHHHHHHhcC
Q psy12196        128 DKNLIQHIVSVHL  140 (150)
Q Consensus       128 ~~~l~~H~~~~~~  140 (150)
                      ...|..|+...|+
T Consensus       112 ~~sL~~H~~~~h~  124 (128)
T PHA00733        112 TDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999988875

>PHA00733 hypothetical protein

Probab=99.16  E-value=4.4e-11  Score=68.79  Aligned_cols=82  Identities=17%  Similarity=0.348  Sum_probs=66.9

Q ss_pred             CCcceecccccccccChHHHHHH------HhccCCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhH
Q psy12196         27 TSLSIQCNMCSLVLDSKESLVTH------ISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNK  100 (150)
Q Consensus        27 ~~~~~~c~~c~~~f~~~~~l~~h------~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~  100 (150)
                      +++.+.|..|.+.|.....+..+      +......+|.|+.|++.|.+...|..|+..+  ..++.|.+|++.|.....
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHH
Confidence            46678899999888776665554      2222348999999999999999999999876  356999999999999999


Q ss_pred             HhhHHhhhcC
Q psy12196        101 LKRHKFQAHN  110 (150)
Q Consensus       101 l~~h~~~~~~  110 (150)
                      |..|+...++
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            9999887665

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.13  E-value=1.1e-10  Score=81.53  Aligned_cols=124  Identities=19%  Similarity=0.393  Sum_probs=87.2

Q ss_pred             CCcccccccCHHHHHHHHHHHhhCCCcceeccc--ccccccChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHhh
Q psy12196          3 CVPCDVLFHNKATLYKHLYLEHKATSLSIQCNM--CSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKME   80 (150)
Q Consensus         3 C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~   80 (150)
                      |+.|...... ..|..|.... . . ..-.|+.  |+..|. ...+.        ..+.|+.|++.|. ...+..|+..+
T Consensus       410 C~NC~~~i~l-~~l~lHe~~C-~-r-~~V~Cp~~~Cg~v~~-r~el~--------~H~~C~~Cgk~f~-~s~LekH~~~~  475 (567)
T PLN03086        410 CRNCKHYIPS-RSIALHEAYC-S-R-HNVVCPHDGCGIVLR-VEEAK--------NHVHCEKCGQAFQ-QGEMEKHMKVF  475 (567)
T ss_pred             CCCCCCccch-hHHHHHHhhC-C-C-cceeCCcccccceee-ccccc--------cCccCCCCCCccc-hHHHHHHHHhc
Confidence            5555544433 3344665432 1 1 1235774  888773 22222        3458999999996 57799999998


Q ss_pred             cCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccC----------chHHHHHHHHhcCCCCCCCC
Q psy12196         81 HNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSE----------DKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus        81 ~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~----------~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +  +++.|. ||..+ ....|..|+..+...+  ++.|+.|++.|..          .+.|..|..+. |.+++.|.
T Consensus       476 H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~K--pi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~  545 (567)
T PLN03086        476 H--EPLQCP-CGVVL-EKEQMVQHQASTCPLR--LITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCD  545 (567)
T ss_pred             C--CCccCC-CCCCc-chhHHHhhhhccCCCC--ceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEcc
Confidence            6  789999 99755 5689999988777777  9999999999952          35788998774 88888874

>PHA02768 hypothetical protein; Provisional

Probab=99.11  E-value=2.5e-11  Score=58.30  Aligned_cols=42  Identities=14%  Similarity=0.324  Sum_probs=21.3

Q ss_pred             ccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHH
Q psy12196         86 YQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNL  131 (150)
Q Consensus        86 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l  131 (150)
                      |.|++||+.|...+.|..|+++|+  +  +++|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k--~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--T--NLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--C--cccCCcccceeccccee
Confidence            455555555555555555555544  2  44555555555544433

>PHA02768 hypothetical protein; Provisional

Probab=99.11  E-value=3.8e-11  Score=57.66  Aligned_cols=44  Identities=11%  Similarity=0.381  Sum_probs=34.5

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHh
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLK  102 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~  102 (150)
                      -|.|++||+.|.....|..|++.|+  +++.|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3678888888888888888888888  6788888888887766553

>PHA00616 hypothetical protein

Probab=99.04  E-value=1.4e-10  Score=53.04  Aligned_cols=32  Identities=34%  Similarity=0.507  Sum_probs=27.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      ||+|+.||+.|..+++|.+|++.+|+++++.+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            57899999999999999999999999888754

>KOG3993|consensus

Probab=98.88  E-value=3.1e-10  Score=75.46  Aligned_cols=78  Identities=23%  Similarity=0.481  Sum_probs=50.4

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhccC--------------------------
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTH--------------------------   54 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~--------------------------   54 (150)
                      |.|..|-..|.+...|.+|.-.  ......|+|+.|++.|+...+|..|. +=|                          
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~--RIV~vEYrCPEC~KVFsCPANLASHR-RWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCP--RIVHVEYRCPECDKVFSCPANLASHR-RWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCC--eeEEeeecCCcccccccCchhhhhhh-cccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            4566677777777777766422  11234467777777777777776664 111                          


Q ss_pred             ---------CcccccCCCCcccCChHHHHHHHHhhc
Q psy12196         55 ---------TLMFTCRRCPSTFLNSATLSKHVKMEH   81 (150)
Q Consensus        55 ---------~~~~~c~~c~~~f~~~~~l~~h~~~~~   81 (150)
                               ...|.|..|++.|.....|..|+.+|+
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence                     124778888888888888888877775

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.83  E-value=2e-09  Score=44.42  Aligned_cols=24  Identities=33%  Similarity=0.808  Sum_probs=14.8

Q ss_pred             HHHHHHhhcCCCcccCCCChhhhc
Q psy12196         73 LSKHVKMEHNSKSYQCNECPESFE   96 (150)
Q Consensus        73 l~~h~~~~~~~~~~~c~~c~~~~~   96 (150)
                      |..|++.|++++||.|++|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            556666666666666666666553

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.75  E-value=2.5e-08  Score=48.76  Aligned_cols=53  Identities=28%  Similarity=0.521  Sum_probs=38.7

Q ss_pred             cccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcC
Q psy12196         85 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      .|.|+.|++ ......|..|....+....+.+.||+|...+.  .+|..|+..+|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            377888888 44556788887776655555788999987655  488889888774

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.72  E-value=4.6e-09  Score=43.28  Aligned_cols=26  Identities=35%  Similarity=0.781  Sum_probs=22.9

Q ss_pred             HHhhHHhhhcCCCCCCcCCcchhhhccC
Q psy12196        100 KLKRHKFQAHNDSVHQIQCPYCITDFSE  127 (150)
Q Consensus       100 ~l~~h~~~~~~~~~~~~~C~~C~~~f~~  127 (150)
                      +|..|+++|++++  ||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k--~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEK--PYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSS--SEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCC--CCCCCCCcCeeCc
Confidence            4788999999988  9999999999863

...

>KOG3993|consensus

Probab=98.68  E-value=1.2e-08  Score=68.17  Aligned_cols=107  Identities=15%  Similarity=0.318  Sum_probs=72.3

Q ss_pred             eecccccccccChHHHHHHH-hccCCcccccCCCCcccCChHHHHHHHHhhcCCCccc---CCCChhhhcchhHHhhHHh
Q psy12196         31 IQCNMCSLVLDSKESLVTHI-SQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQ---CNECPESFERLNKLKRHKF  106 (150)
Q Consensus        31 ~~c~~c~~~f~~~~~l~~h~-~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~---c~~c~~~~~~~~~l~~h~~  106 (150)
                      |.|..|...|.+...|.+|. .++....|.|++|++.|.-..+|..|.+=|.......   -+-=..........+.-.+
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            88999999999999999994 2233378999999999999999999988775432111   0000000001100000000


Q ss_pred             --hhcCCCCCCcCCcchhhhccCchHHHHHHHHhc
Q psy12196        107 --QAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       107 --~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                        ....++  .|.|..|+|.|.....|..|+.+|+
T Consensus       348 sg~dss~g--i~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  348 SGDDSSSG--IFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             cCCcccCc--eeecHHhhhhhHHHHHHHHhHHhhh
Confidence              012233  7999999999999999999999997

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.65  E-value=7.7e-08  Score=47.02  Aligned_cols=48  Identities=25%  Similarity=0.566  Sum_probs=27.6

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHIS   51 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~   51 (150)
                      |.|++|++ --+...|..|....|....+.+.||.|...+.  ..|..|+.
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~   50 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLN   50 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHH
Confidence            55666666 34456666666666654445566666665433  25555553

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=98.64  E-value=1.7e-08  Score=46.25  Aligned_cols=32  Identities=22%  Similarity=0.504  Sum_probs=17.7

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCCCcccC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQC   88 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c   88 (150)
                      ||+|+.||+.|.....+..|++.|+|++++.|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            34555555555555555555555555555544

>PHA00732 hypothetical protein

Probab=98.58  E-value=2.8e-08  Score=52.19  Aligned_cols=46  Identities=28%  Similarity=0.594  Sum_probs=34.4

Q ss_pred             ccccCCCCcccCChHHHHHHHHh-hcCCCcccCCCChhhhcchhHHhhHHhhh
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKM-EHNSKSYQCNECPESFERLNKLKRHKFQA  108 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~-~~~~~~~~c~~c~~~~~~~~~l~~h~~~~  108 (150)
                      ||.|..|++.|.+...|..|++. |.+   +.|++|++.|..   +..|.++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~~---l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYRR---LNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeCC---hhhhhccc
Confidence            57788888888888888888874 543   578888888873   56676443

>PHA00732 hypothetical protein

Probab=98.46  E-value=1.6e-07  Score=49.37  Aligned_cols=37  Identities=22%  Similarity=0.578  Sum_probs=19.4

Q ss_pred             eecccccccccChHHHHHHHhccCCcccccCCCCcccC
Q psy12196         31 IQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFL   68 (150)
Q Consensus        31 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~   68 (150)
                      |.|..|++.|.+...|..|+...+. ++.|+.|++.|.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~-~~~C~~CgKsF~   38 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT-LTKCPVCNKSYR   38 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC-CCccCCCCCEeC
Confidence            4555666666665556655422222 335556665554

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.42  E-value=9.1e-08  Score=38.23  Aligned_cols=23  Identities=35%  Similarity=0.700  Sum_probs=18.3

Q ss_pred             cCCcchhhhccCchHHHHHHHHh
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56888888888888888888763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.30  E-value=3.6e-07  Score=36.76  Aligned_cols=24  Identities=38%  Similarity=0.757  Sum_probs=18.2

Q ss_pred             cCCcchhhhccCchHHHHHHHHhc
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      |.|+.|++.|.+...|..|+.++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            568888888888888888888775

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.23  E-value=7.4e-07  Score=35.51  Aligned_cols=22  Identities=27%  Similarity=0.557  Sum_probs=17.5

Q ss_pred             CCCCcccccccCHHHHHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYL   22 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~   22 (150)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5688888888888888888765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.19  E-value=1.2e-06  Score=48.42  Aligned_cols=73  Identities=22%  Similarity=0.398  Sum_probs=19.5

Q ss_pred             CCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHhh
Q psy12196          2 SCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKME   80 (150)
Q Consensus         2 ~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~   80 (150)
                      +|..|+..|.+...|..|+...|....     + ....+.....+...+...-...+.|..|+..|.+...|..|+..+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~-----~-~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDI-----P-DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Ccccccccccccccccccccccccccc-----c-cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            588899999999999999877665211     1 111112233333333222224678888888888888888888864

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.11  E-value=2e-06  Score=34.46  Aligned_cols=24  Identities=29%  Similarity=0.628  Sum_probs=17.1

Q ss_pred             CCCCcccccccCHHHHHHHHHHHh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEH   24 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~   24 (150)
                      |+|+.|+..|.+...|..|+..+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            568888888888888888877643

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.08  E-value=6.7e-07  Score=37.15  Aligned_cols=25  Identities=28%  Similarity=0.361  Sum_probs=18.3

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      +|.|..|++.|.+..+|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777776664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.05  E-value=3.5e-06  Score=39.53  Aligned_cols=31  Identities=29%  Similarity=0.594  Sum_probs=22.7

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      .|-.|++|+..+....+|.+|++..|+.+|.
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTTS--
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhcccCC
Confidence            3788999999999999999999999988874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.99  E-value=2.8e-06  Score=46.96  Aligned_cols=73  Identities=23%  Similarity=0.408  Sum_probs=17.8

Q ss_pred             ccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHh
Q psy12196         59 TCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus        59 ~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      +|..|+..|.+...+..|+...++-..-..    ..+.....+..+.... -..  .+.|..|++.|.+...|..|+..+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~----~~l~~~~~~~~~~~~~-~~~--~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQ----KYLVDPNRLLNYLRKK-VKE--SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------S--SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccccc----cccccccccccccccc-cCC--CCCCCccCCCCcCHHHHHHHHcCc
Confidence            366677777777777777765544321100    1111222222222111 111  467888888888888888888765

>smart00355 ZnF_C2H2 zinc finger

Probab=97.78  E-value=2.6e-05  Score=31.63  Aligned_cols=23  Identities=26%  Similarity=0.560  Sum_probs=17.6

Q ss_pred             cCCcchhhhccCchHHHHHHHHh
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      |.|+.|++.|.....|..|+..|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            46778888888888888887754

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.71  E-value=1.1e-05  Score=52.67  Aligned_cols=69  Identities=17%  Similarity=0.296  Sum_probs=42.4

Q ss_pred             CcccccCC--CCcccCChHHHHHHHHhhc-CCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHH
Q psy12196         55 TLMFTCRR--CPSTFLNSATLSKHVKMEH-NSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNL  131 (150)
Q Consensus        55 ~~~~~c~~--c~~~f~~~~~l~~h~~~~~-~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l  131 (150)
                      ++||+|++  |+++|.+...|.-|+...+ ..+...-+          .-..+...  ..+.+||+|+.|+|.+...-.|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F--~~~~KPYrCevC~KRYKNlNGL  414 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIF--SAKDKPYRCEVCDKRYKNLNGL  414 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------Cccccccc--cccCCceeccccchhhccCccc
Confidence            38999988  9999999999999877533 22211100          00011111  2233478888888887777777


Q ss_pred             HHHH
Q psy12196        132 IQHI  135 (150)
Q Consensus       132 ~~H~  135 (150)
                      ..|.
T Consensus       415 KYHr  418 (423)
T COG5189         415 KYHR  418 (423)
T ss_pred             eecc
Confidence            6665

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.69  E-value=2.1e-05  Score=31.54  Aligned_cols=24  Identities=33%  Similarity=0.589  Sum_probs=17.7

Q ss_pred             cCCcchhhhccCchHHHHHHHHhcC
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      |+|+.|+.... ...|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            57888888887 8888888888774

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.65  E-value=3.2e-05  Score=31.95  Aligned_cols=19  Identities=32%  Similarity=0.679  Sum_probs=7.3

Q ss_pred             ccCCCCcccCChHHHHHHH
Q psy12196         59 TCRRCPSTFLNSATLSKHV   77 (150)
Q Consensus        59 ~c~~c~~~f~~~~~l~~h~   77 (150)
                      .|..|+..|.+...|..|+
T Consensus         3 ~C~~C~~~F~~~~~l~~H~   21 (27)
T PF13912_consen    3 ECDECGKTFSSLSALREHK   21 (27)
T ss_dssp             EETTTTEEESSHHHHHHHH
T ss_pred             CCCccCCccCChhHHHHHh
Confidence            3333333333333333333

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.57  E-value=2.6e-05  Score=50.93  Aligned_cols=25  Identities=24%  Similarity=0.655  Sum_probs=16.7

Q ss_pred             CcCCcc--hhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPY--CITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~--C~~~f~~~~~l~~H~~~~~  139 (150)
                      ||+|++  |+|.+...-.|..|+.-.|
T Consensus       349 pykCpV~gC~K~YknqnGLKYH~lhGH  375 (423)
T COG5189         349 PYKCPVEGCNKKYKNQNGLKYHMLHGH  375 (423)
T ss_pred             eecCCCCCchhhhccccchhhhhhccc
Confidence            777754  7777777777777765444

>smart00355 ZnF_C2H2 zinc finger

Probab=97.56  E-value=0.00012  Score=29.58  Aligned_cols=22  Identities=27%  Similarity=0.647  Sum_probs=18.7

Q ss_pred             CCCCcccccccCHHHHHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYL   22 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~   22 (150)
                      |.|+.|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            5788899999999998888875

>KOG2231|consensus

Probab=97.43  E-value=0.00063  Score=49.35  Aligned_cols=134  Identities=23%  Similarity=0.364  Sum_probs=82.3

Q ss_pred             CCCcccccc---------------cCHHHHHHHHHHHhhCCCcceecccccc---------cccChHHHHHHHhccCC--
Q psy12196          2 SCVPCDVLF---------------HNKATLYKHLYLEHKATSLSIQCNMCSL---------VLDSKESLVTHISQTHT--   55 (150)
Q Consensus         2 ~C~~C~~~f---------------~~~~~l~~h~~~~~~~~~~~~~c~~c~~---------~f~~~~~l~~h~~~~~~--   55 (150)
                      .|..|+..|               .....|+.|+...|.    .+-|..|..         .......|..|+ +.+.  
T Consensus       101 ~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~----~~~c~lC~~~~kif~~e~k~Yt~~el~~h~-~~gd~d  175 (669)
T KOG2231|consen  101 SCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK----LHLCSLCLQNLKIFINERKLYTRAELNLHL-MFGDPD  175 (669)
T ss_pred             hcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh----hhccccccccceeeeeeeehehHHHHHHHH-hcCCCc
Confidence            577777666               367889999877664    234555532         233456777776 2221  


Q ss_pred             -----cccccCCCCcccCChHHHHHHHHhhcCCCcccCCCCh------hhhcchhHHhhHHhhhcCCCC-CCcCCcchhh
Q psy12196         56 -----LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECP------ESFERLNKLKRHKFQAHNDSV-HQIQCPYCIT  123 (150)
Q Consensus        56 -----~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~------~~~~~~~~l~~h~~~~~~~~~-~~~~C~~C~~  123 (150)
                           .--.|..|...|.....|..|++.++    |.|..|+      ..|....+|..|-+..|-.-+ -...+..+..
T Consensus       176 ~~s~rGhp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~HflCE~~~C~~~~f~~  251 (669)
T KOG2231|consen  176 DESCRGHPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHFLCEEEFCRTKKFYV  251 (669)
T ss_pred             cccccCCccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcCccccccccccceeee
Confidence                 22468889999999999999999876    5666663      445667788888776543221 0222334444


Q ss_pred             hccCchHHHHHHHHhcCCCCC
Q psy12196        124 DFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus       124 ~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      +|.....|.+|-+.+..|+.|
T Consensus       252 ~~~~ei~lk~~~~~~~~e~~~  272 (669)
T KOG2231|consen  252 AFELEIELKAHNRFIQHEKCY  272 (669)
T ss_pred             hhHHHHHHHhhccccchheec
Confidence            555566666555444444444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.40  E-value=3.8e-05  Score=31.06  Aligned_cols=23  Identities=35%  Similarity=0.639  Sum_probs=17.6

Q ss_pred             cCCcchhhhccCchHHHHHHHHh
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      |.|..|++.|.+...|..|++++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45778888888888888887654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.35  E-value=0.00017  Score=28.84  Aligned_cols=23  Identities=30%  Similarity=0.528  Sum_probs=17.4

Q ss_pred             CCCCcccccccCHHHHHHHHHHHh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEH   24 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~   24 (150)
                      |+|+.|+.... ...|..|+..+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            67999998887 888999988765

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.32  E-value=0.00029  Score=33.22  Aligned_cols=30  Identities=27%  Similarity=0.468  Sum_probs=16.6

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCCCc
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNSKS   85 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~   85 (150)
                      .|..||+|+..+..+.+|..|+...++.+|
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            566677777777777777777766666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.94  E-value=8.8e-05  Score=30.62  Aligned_cols=22  Identities=36%  Similarity=0.608  Sum_probs=14.2

Q ss_pred             cCCcchhhhccCchHHHHHHHH
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVS  137 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~  137 (150)
                      |.|..|++.|.+...|..|+.+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566677777776666666644

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.94  E-value=0.00047  Score=41.41  Aligned_cols=38  Identities=21%  Similarity=0.543  Sum_probs=26.0

Q ss_pred             cccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCc
Q psy12196         85 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSED  128 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~  128 (150)
                      +|.|. |+.   ....+.+|.+++.+++  +|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~--~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEA--VYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCc--cEECCCCCceeEEe
Confidence            47776 765   4556677777777766  77777777776654

>PRK04860 hypothetical protein; Provisional

Probab=96.93  E-value=0.00036  Score=41.90  Aligned_cols=28  Identities=14%  Similarity=0.176  Sum_probs=13.3

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|. |++   ....+.+|.+++.++++|.|
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC  146 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRC  146 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEEC
Confidence            44454 443   33444455555555555444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.77  E-value=0.0011  Score=26.64  Aligned_cols=19  Identities=26%  Similarity=0.772  Sum_probs=8.5

Q ss_pred             cCCCCcccCChHHHHHHHH
Q psy12196         60 CRRCPSTFLNSATLSKHVK   78 (150)
Q Consensus        60 c~~c~~~f~~~~~l~~h~~   78 (150)
                      |.+|+..|.+...+..|++
T Consensus         3 C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    3 CDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             ETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCcCCHHHHHHHHC
Confidence            4444444444444444443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.60  E-value=0.00082  Score=27.63  Aligned_cols=21  Identities=29%  Similarity=0.664  Sum_probs=15.7

Q ss_pred             CCCCcccccccCHHHHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHLY   21 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~   21 (150)
                      |-|..|++.|.+...+..|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            567788888888888777754

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.23  E-value=0.0069  Score=24.39  Aligned_cols=19  Identities=37%  Similarity=0.532  Sum_probs=11.0

Q ss_pred             CCCcccccccCHHHHHHHHH
Q psy12196          2 SCVPCDVLFHNKATLYKHLY   21 (150)
Q Consensus         2 ~C~~C~~~f~~~~~l~~h~~   21 (150)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 5555555543

>KOG1146|consensus

Probab=96.12  E-value=0.0015  Score=50.64  Aligned_cols=51  Identities=25%  Similarity=0.479  Sum_probs=31.7

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhc-------------------------CCCcccCCCChhhhcchhHHhhHHh
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEH-------------------------NSKSYQCNECPESFERLNKLKRHKF  106 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~-------------------------~~~~~~c~~c~~~~~~~~~l~~h~~  106 (150)
                      +.+.|+.|+..|.....|..|+++.+                         +.++|.|..|...+....+|.+|++
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            55666666666666666666666522                         2355666666666666666666654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.74  E-value=0.0052  Score=26.78  Aligned_cols=24  Identities=17%  Similarity=0.491  Sum_probs=19.4

Q ss_pred             CcCCcchhhhccCchHHHHHHHHh
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      +|.|..|++.|.+...+..|+.+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChH
Confidence            577888999998888888887654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.62  E-value=0.022  Score=38.25  Aligned_cols=125  Identities=22%  Similarity=0.423  Sum_probs=80.4

Q ss_pred             CCCCc--ccccccCHHHHHHHHHHHhhCCCcceecccccc---ccc------ChHHHHHHHhccCC------cccccCCC
Q psy12196          1 MSCVP--CDVLFHNKATLYKHLYLEHKATSLSIQCNMCSL---VLD------SKESLVTHISQTHT------LMFTCRRC   63 (150)
Q Consensus         1 ~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~---~f~------~~~~l~~h~~~~~~------~~~~c~~c   63 (150)
                      |.|+.  |+........|..|.+..|.    -+.|..|..   .|.      ....|..|. ..+.      .--.|..|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~----~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~-~~G~~e~GFKGHP~C~FC  226 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHG----FVLCSECIGNKKDFWNEIRLFRSSTLRDHK-NGGLEEEGFKGHPLCIFC  226 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcC----cEEhHhhhcCcccCccceeeeecccccccc-cCCccccCcCCCchhhhc
Confidence            44554  67777778899999888664    245666632   232      334555564 2221      23469999


Q ss_pred             CcccCChHHHHHHHHhhcCCCcccCCCChh-------hhcchhHHhhHHhhhcCCCCCCcCCcc--hh----hhccCchH
Q psy12196         64 PSTFLNSATLSKHVKMEHNSKSYQCNECPE-------SFERLNKLKRHKFQAHNDSVHQIQCPY--CI----TDFSEDKN  130 (150)
Q Consensus        64 ~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~-------~~~~~~~l~~h~~~~~~~~~~~~~C~~--C~----~~f~~~~~  130 (150)
                      ...|.+...|..|++..+.    .|-+|+.       .|.....|..|....      -|.|..  |.    ..|...-.
T Consensus       227 ~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~------hy~ct~qtc~~~k~~vf~~~~e  296 (493)
T COG5236         227 KIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNA------HYCCTFQTCRVGKCYVFPYHTE  296 (493)
T ss_pred             cceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcC------ceEEEEEEEecCcEEEeccHHH
Confidence            9999999999999997663    4555543       355666777775422      334422  21    36888999


Q ss_pred             HHHHHHHhcC
Q psy12196        131 LIQHIVSVHL  140 (150)
Q Consensus       131 l~~H~~~~~~  140 (150)
                      |+.|+...|+
T Consensus       297 l~~h~~~~h~  306 (493)
T COG5236         297 LLEHLTRFHK  306 (493)
T ss_pred             HHHHHHHHhh
Confidence            9999988774

>TIGR00622 ssl1 transcription factor ssl1

Probab=95.45  E-value=0.02  Score=32.20  Aligned_cols=25  Identities=20%  Similarity=0.328  Sum_probs=18.3

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      .|+|+.|...|...-++-.|-..|.
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhccC
Confidence            6778888888887777777765553

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.90  E-value=0.012  Score=25.39  Aligned_cols=9  Identities=33%  Similarity=0.818  Sum_probs=5.9

Q ss_pred             CcCCcchhh
Q psy12196        115 QIQCPYCIT  123 (150)
Q Consensus       115 ~~~C~~C~~  123 (150)
                      ++.||.|+.
T Consensus        17 ~~~CP~Cg~   25 (33)
T cd00350          17 PWVCPVCGA   25 (33)
T ss_pred             CCcCcCCCC
Confidence            667777763

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2482|consensus

Probab=94.77  E-value=0.11  Score=35.07  Aligned_cols=51  Identities=25%  Similarity=0.438  Sum_probs=29.3

Q ss_pred             cCCCChhhhcchhHHhhHHhhhcC--------C-----------------CCCCcCCcchhhhccCchHHHHHHHH
Q psy12196         87 QCNECPESFERLNKLKRHKFQAHN--------D-----------------SVHQIQCPYCITDFSEDKNLIQHIVS  137 (150)
Q Consensus        87 ~c~~c~~~~~~~~~l~~h~~~~~~--------~-----------------~~~~~~C~~C~~~f~~~~~l~~H~~~  137 (150)
                      +|-.|.....+...|..|+.+.+.        +                 ..+...|-.|.-.|-....|..||.-
T Consensus       281 ~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  281 VCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             EEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            566666666666666666654331        0                 01223466677677777777777643

>KOG1146|consensus

Probab=94.60  E-value=0.016  Score=45.31  Aligned_cols=58  Identities=21%  Similarity=0.317  Sum_probs=47.6

Q ss_pred             cCCCcccCCCChhhhcchhHHhhHHhhhcCC-----------------------CCCCcCCcchhhhccCchHHHHHHHH
Q psy12196         81 HNSKSYQCNECPESFERLNKLKRHKFQAHND-----------------------SVHQIQCPYCITDFSEDKNLIQHIVS  137 (150)
Q Consensus        81 ~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~-----------------------~~~~~~C~~C~~~f~~~~~l~~H~~~  137 (150)
                      .-.+.+.|.+|+..|.....|..|++..+.+                       ..++|.|..|...++...+|..|+.+
T Consensus       461 S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  461 SFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            3457899999999999999999999874311                       12578999999999999999999865


Q ss_pred             h
Q psy12196        138 V  138 (150)
Q Consensus       138 ~  138 (150)
                      -
T Consensus       541 ~  541 (1406)
T KOG1146|consen  541 D  541 (1406)
T ss_pred             H
Confidence            3

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=94.54  E-value=0.029  Score=27.00  Aligned_cols=25  Identities=32%  Similarity=0.712  Sum_probs=21.2

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      -+.||.|+..|....++.+|...-|
T Consensus        17 ~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          17 FLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eeeCCchhHHHHHhHHHHHHhhHHh
Confidence            7889999999999999999975555

>KOG2231|consensus

Probab=93.53  E-value=0.15  Score=37.69  Aligned_cols=98  Identities=23%  Similarity=0.367  Sum_probs=61.1

Q ss_pred             ccccChHHHHHHHhccCCcccccCCC---C------cccCChHHHHHHHHhhcC-CC----cccCCCChhhhcchhHHhh
Q psy12196         38 LVLDSKESLVTHISQTHTLMFTCRRC---P------STFLNSATLSKHVKMEHN-SK----SYQCNECPESFERLNKLKR  103 (150)
Q Consensus        38 ~~f~~~~~l~~h~~~~~~~~~~c~~c---~------~~f~~~~~l~~h~~~~~~-~~----~~~c~~c~~~~~~~~~l~~  103 (150)
                      ..|.....|..|+...|+. +.|.+|   .      ........|..|+...-. ++    ...|..|...|.....|.+
T Consensus       122 ~~~~s~~~Lk~H~~~~H~~-~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~r  200 (669)
T KOG2231|consen  122 TEFKSVENLKNHMRDQHKL-HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYR  200 (669)
T ss_pred             cchhHHHHHHHHHHHhhhh-hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHH
Confidence            3344678888887555542 233333   1      222345566666654322 21    2468889999999999999


Q ss_pred             HHhhhcCCCCCCcCC---cchhhhccCchHHHHHHHHhc
Q psy12196        104 HKFQAHNDSVHQIQC---PYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       104 h~~~~~~~~~~~~~C---~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      |++..+..-  -| |   +.++.-|....+|..|.+..|
T Consensus       201 H~~~~h~~c--hf-C~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  201 HLRFDHEFC--HF-CDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             hhccceehe--ee-cCcccccchhcccchHHHHHhhhcC
Confidence            987654432  22 3   345566888899999998887

>KOG2893|consensus

Probab=93.07  E-value=0.03  Score=35.68  Aligned_cols=40  Identities=25%  Similarity=0.519  Sum_probs=19.9

Q ss_pred             cCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhh
Q psy12196         60 CRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKR  103 (150)
Q Consensus        60 c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~  103 (150)
                      |..|++.|.....|.+|++..+    |+|.+|-+..-+-..|..
T Consensus        13 cwycnrefddekiliqhqkakh----fkchichkkl~sgpglsi   52 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSI   52 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc----ceeeeehhhhccCCCcee
Confidence            4455555555555555544332    555555544433333333

>KOG4173|consensus

Probab=92.48  E-value=0.061  Score=33.49  Aligned_cols=79  Identities=23%  Similarity=0.516  Sum_probs=41.8

Q ss_pred             cccCC--CCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcC--------CCCCCcCC--cchhhhc
Q psy12196         58 FTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN--------DSVHQIQC--PYCITDF  125 (150)
Q Consensus        58 ~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~--------~~~~~~~C--~~C~~~f  125 (150)
                      +.|++  |...|.+-.....|+..-++.   .|.+|.+.|.+.--|..|+..-+.        .+.-.|+|  ..|+-.|
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KF  156 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKF  156 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhh
Confidence            44554  445555555555555443332   566666666665555555433221        11114555  3477777


Q ss_pred             cCchHHHHHHHHhc
Q psy12196        126 SEDKNLIQHIVSVH  139 (150)
Q Consensus       126 ~~~~~l~~H~~~~~  139 (150)
                      .+..+-..|+-..|
T Consensus       157 kT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  157 KTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhHHHHhc
Confidence            77777767765554

>KOG2482|consensus

Probab=92.08  E-value=0.3  Score=33.08  Aligned_cols=50  Identities=30%  Similarity=0.508  Sum_probs=36.9

Q ss_pred             cccCCCCcccCChHHHHHHHHhhcC---------------------------CCcccCCCChhhhcchhHHhhHHhh
Q psy12196         58 FTCRRCPSTFLNSATLSKHVKMEHN---------------------------SKSYQCNECPESFERLNKLKRHKFQ  107 (150)
Q Consensus        58 ~~c~~c~~~f~~~~~l~~h~~~~~~---------------------------~~~~~c~~c~~~~~~~~~l~~h~~~  107 (150)
                      ..|-.|...+.+...|..||...+.                           ...-.|.+|.-.|-....|..|+..
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhccc
Confidence            4677788777778888888876441                           1224688888889999999998754

>KOG2186|consensus

Probab=91.54  E-value=0.13  Score=33.21  Aligned_cols=45  Identities=18%  Similarity=0.335  Sum_probs=26.0

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHI   50 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~   50 (150)
                      |.|+.||........ ..|+.+.+.   .-|.|-.|+++|.. ..+..|.
T Consensus         4 FtCnvCgEsvKKp~v-ekH~srCrn---~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    4 FTCNVCGESVKKPQV-EKHMSRCRN---AYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             Eehhhhhhhccccch-HHHHHhccC---CeeEEeeccccccc-chhhhhh
Confidence            456667666654433 336655433   23667777777766 5566665

>KOG4173|consensus

Probab=91.18  E-value=0.13  Score=32.08  Aligned_cols=77  Identities=27%  Similarity=0.553  Sum_probs=50.0

Q ss_pred             eeccc--ccccccChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHhhc----------CCCcccCCC--Chhhhc
Q psy12196         31 IQCNM--CSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEH----------NSKSYQCNE--CPESFE   96 (150)
Q Consensus        31 ~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~----------~~~~~~c~~--c~~~~~   96 (150)
                      +.|+.  |...|..-.....|-...|..  .|..|.+.|.+...|..|+...+          |.-.|.|-+  |+..|.
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~--sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFk  157 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN--SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFK  157 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc--hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhh
Confidence            45654  556666555555553233332  58888888888888888877644          455688844  888888


Q ss_pred             chhHHhhHHhhhc
Q psy12196         97 RLNKLKRHKFQAH  109 (150)
Q Consensus        97 ~~~~l~~h~~~~~  109 (150)
                      +...-..|+-..+
T Consensus       158 T~r~RkdH~I~~H  170 (253)
T KOG4173|consen  158 TSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhHHHHhc
Confidence            7777677765433

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=91.10  E-value=0.13  Score=20.87  Aligned_cols=9  Identities=33%  Similarity=0.888  Sum_probs=5.1

Q ss_pred             ccCCCCccc
Q psy12196         59 TCRRCPSTF   67 (150)
Q Consensus        59 ~c~~c~~~f   67 (150)
                      .|+.||..|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            456666555

Several members are annotated as putative helicases.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.05  E-value=0.16  Score=24.55  Aligned_cols=21  Identities=19%  Similarity=0.637  Sum_probs=12.7

Q ss_pred             CCCcccccccCHHHHHHHHHH
Q psy12196          2 SCVPCDVLFHNKATLYKHLYL   22 (150)
Q Consensus         2 ~C~~C~~~f~~~~~l~~h~~~   22 (150)
                      .|+-||..|....+..+|...
T Consensus        19 rCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          19 RCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             eCCchhHHHHHhHHHHHHhhH
Confidence            466666666666666666544

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.77  E-value=0.045  Score=38.13  Aligned_cols=58  Identities=26%  Similarity=0.437  Sum_probs=37.1

Q ss_pred             cccCCCChhhhcchhHHhhHHh--hhcCC--CCCCcCCc--chhhhccCchHHHHHHHHhcCCCCC
Q psy12196         85 SYQCNECPESFERLNKLKRHKF--QAHND--SVHQIQCP--YCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h~~--~~~~~--~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      ++.|..|...|.....|..|..  .|.++  .  ++.|+  .|++.|.....+..|...+.+-.+.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLK--PFSCPYSLCGKLFSRNDALKRHILLHTSISPA  352 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCC--ceeeeccCCCccccccccccCCcccccCCCcc
Confidence            4566666666666666666666  45555  4  66666  5777777777676666666655544

>PF12907 zf-met2: Zinc-binding

Probab=90.16  E-value=0.24  Score=22.42  Aligned_cols=33  Identities=21%  Similarity=0.367  Sum_probs=23.1

Q ss_pred             cCCcchhhhcc---CchHHHHHHHHhcCCCC-CCCCC
Q psy12196        116 IQCPYCITDFS---EDKNLIQHIVSVHLGKE-GTAPA  148 (150)
Q Consensus       116 ~~C~~C~~~f~---~~~~l~~H~~~~~~~~~-~~~~~  148 (150)
                      ++|.+|-..|.   ....|..|....|.... .+|.+
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~~~CFP   38 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNTFEECFP   38 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCCHHHcCC
Confidence            57888886655   44679999988887763 35543

>KOG2893|consensus

Probab=89.99  E-value=0.075  Score=33.94  Aligned_cols=49  Identities=22%  Similarity=0.430  Sum_probs=36.8

Q ss_pred             cCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196         87 QCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus        87 ~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      =|..|.+.|.....|..|+..      +-|+|-+|-|...+--.|..|-...|.|
T Consensus        12 wcwycnrefddekiliqhqka------khfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA------KHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             eeeecccccchhhhhhhhhhh------ccceeeeehhhhccCCCceeehhhhhhh
Confidence            388899999999999888653      3789999998877666666664444433

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=89.88  E-value=0.21  Score=29.15  Aligned_cols=26  Identities=27%  Similarity=0.360  Sum_probs=16.4

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      ...|-+||+.|..   |.+|+..|||-.|
T Consensus        72 ~i~clecGk~~k~---LkrHL~~~~gltp   97 (132)
T PF05443_consen   72 YIICLECGKKFKT---LKRHLRTHHGLTP   97 (132)
T ss_dssp             -EE-TBT--EESB---HHHHHHHTT-S-H
T ss_pred             eeEEccCCcccch---HHHHHHHccCCCH
Confidence            4579999999887   6899999986543

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.70  E-value=0.26  Score=27.72  Aligned_cols=29  Identities=17%  Similarity=0.464  Sum_probs=15.2

Q ss_pred             ecccccccccChHHHHHHHhccCCcccccCCCCcccCCh
Q psy12196         32 QCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNS   70 (150)
Q Consensus        32 ~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~   70 (150)
                      .|+.||+.|..-          ...|..||.||..|...
T Consensus        11 ~Cp~CG~kFYDL----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   11 TCPSCGAKFYDL----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cCCCCcchhccC----------CCCCccCCCCCCccCcc
Confidence            566666666421          11344566666665544

The function of members of this family is unknown.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=89.64  E-value=0.2  Score=30.41  Aligned_cols=24  Identities=25%  Similarity=0.653  Sum_probs=17.3

Q ss_pred             CcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchh
Q psy12196         84 KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCI  122 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~  122 (150)
                      +.|.|.+||..             +.++.  |.+||+|+
T Consensus       133 ~~~vC~vCGy~-------------~~ge~--P~~CPiCg  156 (166)
T COG1592         133 KVWVCPVCGYT-------------HEGEA--PEVCPICG  156 (166)
T ss_pred             CEEEcCCCCCc-------------ccCCC--CCcCCCCC
Confidence            36999999863             23333  78899998

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=89.59  E-value=0.18  Score=21.88  Aligned_cols=10  Identities=20%  Similarity=0.554  Sum_probs=6.1

Q ss_pred             ccCCCChhhh
Q psy12196         86 YQCNECPESF   95 (150)
Q Consensus        86 ~~c~~c~~~~   95 (150)
                      |.|.+||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            5666676543

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF15269 zf-C2H2_7: Zinc-finger

Probab=89.55  E-value=0.28  Score=22.56  Aligned_cols=29  Identities=17%  Similarity=0.317  Sum_probs=22.6

Q ss_pred             CCCCCCcCCcchhhhccCchHHHHHHHHh
Q psy12196        110 NDSVHQIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       110 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      ..++..|+|-+|......++.|..||+-.
T Consensus        15 ~gkp~~ykcfqcpftc~~kshl~nhmky~   43 (54)
T PF15269_consen   15 PGKPFKYKCFQCPFTCNEKSHLFNHMKYS   43 (54)
T ss_pred             CCCCccceeecCCcccchHHHHHHHHHHH
Confidence            34455678999999999999999998643

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=89.39  E-value=0.15  Score=22.56  Aligned_cols=32  Identities=19%  Similarity=0.467  Sum_probs=14.5

Q ss_pred             ecccccccccChHHHHHHHhccCCcccccCCCCccc
Q psy12196         32 QCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTF   67 (150)
Q Consensus        32 ~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f   67 (150)
                      .|+.|+..|.-......    .......|+.|+..|
T Consensus         4 ~CP~C~~~~~v~~~~~~----~~~~~v~C~~C~~~~   35 (38)
T TIGR02098         4 QCPNCKTSFRVVDSQLG----ANGGKVRCGKCGHVW   35 (38)
T ss_pred             ECCCCCCEEEeCHHHcC----CCCCEEECCCCCCEE
Confidence            46666665554333111    111234566666544

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=89.36  E-value=0.18  Score=24.75  Aligned_cols=9  Identities=33%  Similarity=1.047  Sum_probs=4.5

Q ss_pred             cccccCCCC
Q psy12196         56 LMFTCRRCP   64 (150)
Q Consensus        56 ~~~~c~~c~   64 (150)
                      ..|.||.||
T Consensus        26 v~F~CPnCG   34 (61)
T COG2888          26 VKFPCPNCG   34 (61)
T ss_pred             eEeeCCCCC
Confidence            344555555

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.16  E-value=1.1  Score=25.22  Aligned_cols=26  Identities=23%  Similarity=0.308  Sum_probs=23.4

Q ss_pred             CcCC----cchhhhccCchHHHHHHHHhcC
Q psy12196        115 QIQC----PYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       115 ~~~C----~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      -|.|    +.|+..+.+...+..|+..+||
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            3789    9999999999999999999885

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=88.72  E-value=0.36  Score=19.52  Aligned_cols=20  Identities=30%  Similarity=0.735  Sum_probs=15.0

Q ss_pred             CCcchhhhccCchHHHHHHHH
Q psy12196        117 QCPYCITDFSEDKNLIQHIVS  137 (150)
Q Consensus       117 ~C~~C~~~f~~~~~l~~H~~~  137 (150)
                      .||+|++.+ ....+.+|+..
T Consensus         3 ~CPiC~~~v-~~~~in~HLD~   22 (26)
T smart00734        3 QCPVCFREV-PENLINSHLDS   22 (26)
T ss_pred             cCCCCcCcc-cHHHHHHHHHH
Confidence            588998888 55677788753

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.72  E-value=0.3  Score=27.45  Aligned_cols=26  Identities=19%  Similarity=0.492  Sum_probs=22.4

Q ss_pred             cccC----CCChhhhcchhHHhhHHhhhcC
Q psy12196         85 SYQC----NECPESFERLNKLKRHKFQAHN  110 (150)
Q Consensus        85 ~~~c----~~c~~~~~~~~~l~~h~~~~~~  110 (150)
                      .|.|    ..|++.......+..|.+..++
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            3899    9999999999999999887653

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=88.71  E-value=1.4  Score=30.12  Aligned_cols=22  Identities=32%  Similarity=0.772  Sum_probs=11.2

Q ss_pred             CCcccccccCHHHHHHHHHHHh
Q psy12196          3 CVPCDVLFHNKATLYKHLYLEH   24 (150)
Q Consensus         3 C~~C~~~f~~~~~l~~h~~~~~   24 (150)
                      |..|...|-+-..|..|++..|
T Consensus       223 C~FC~~~FYdDDEL~~HcR~~H  244 (493)
T COG5236         223 CIFCKIYFYDDDELRRHCRLRH  244 (493)
T ss_pred             hhhccceecChHHHHHHHHhhh
Confidence            4445555555555555554433

>PHA00626 hypothetical protein

Probab=88.62  E-value=0.081  Score=25.58  Aligned_cols=11  Identities=27%  Similarity=0.682  Sum_probs=5.3

Q ss_pred             ccCCCChhhhc
Q psy12196         86 YQCNECPESFE   96 (150)
Q Consensus        86 ~~c~~c~~~~~   96 (150)
                      |.|..||..|+
T Consensus        24 YkCkdCGY~ft   34 (59)
T PHA00626         24 YVCCDCGYNDS   34 (59)
T ss_pred             eEcCCCCCeec
Confidence            45555544443

>smart00614 ZnF_BED BED zinc finger

Probab=88.60  E-value=0.37  Score=22.88  Aligned_cols=24  Identities=33%  Similarity=0.695  Sum_probs=16.3

Q ss_pred             cCCcchhhhccCc-----hHHHHHHHHhc
Q psy12196        116 IQCPYCITDFSED-----KNLIQHIVSVH  139 (150)
Q Consensus       116 ~~C~~C~~~f~~~-----~~l~~H~~~~~  139 (150)
                      -.|..|++.+...     +.|.+|+...+
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~h   47 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRKH   47 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhHC
Confidence            4577777776554     68888887543

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=88.54  E-value=0.063  Score=34.16  Aligned_cols=13  Identities=31%  Similarity=0.503  Sum_probs=10.2

Q ss_pred             cCCcchhhhccCc
Q psy12196        116 IQCPYCITDFSED  128 (150)
Q Consensus       116 ~~C~~C~~~f~~~  128 (150)
                      ..||.||.++...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            4699999887754

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=88.31  E-value=0.13  Score=24.59  Aligned_cols=29  Identities=38%  Similarity=0.893  Sum_probs=16.3

Q ss_pred             ccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhh
Q psy12196         86 YQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  123 (150)
Q Consensus        86 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~  123 (150)
                      |.|..||..|.....+       ..+.  ...|+.|+.
T Consensus         6 y~C~~Cg~~fe~~~~~-------~~~~--~~~CP~Cg~   34 (52)
T TIGR02605         6 YRCTACGHRFEVLQKM-------SDDP--LATCPECGG   34 (52)
T ss_pred             EEeCCCCCEeEEEEec-------CCCC--CCCCCCCCC
Confidence            6777787777653211       1122  446777774

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=87.71  E-value=0.26  Score=22.82  Aligned_cols=11  Identities=45%  Similarity=0.981  Sum_probs=6.2

Q ss_pred             ccCCCChhhhc
Q psy12196         86 YQCNECPESFE   96 (150)
Q Consensus        86 ~~c~~c~~~~~   96 (150)
                      |.|..||..+.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            55666665444

present in RNA polymerase I, II and III

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=87.25  E-value=0.76  Score=27.84  Aligned_cols=34  Identities=18%  Similarity=0.377  Sum_probs=23.1

Q ss_pred             CCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhcc
Q psy12196         82 NSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFS  126 (150)
Q Consensus        82 ~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~  126 (150)
                      +..-|.|+.|+..|+....+.         .  .|.||.||....
T Consensus       106 ~~~~Y~Cp~c~~r~tf~eA~~---------~--~F~Cp~Cg~~L~  139 (158)
T TIGR00373       106 NNMFFICPNMCVRFTFNEAME---------L--NFTCPRCGAMLD  139 (158)
T ss_pred             CCCeEECCCCCcEeeHHHHHH---------c--CCcCCCCCCEee
Confidence            445678888887777766553         1  678888886643

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=86.92  E-value=0.18  Score=22.66  Aligned_cols=29  Identities=38%  Similarity=0.948  Sum_probs=16.7

Q ss_pred             ccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhh
Q psy12196         86 YQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  123 (150)
Q Consensus        86 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~  123 (150)
                      |.|..||..|......       ....  ...|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~-------~~~~--~~~CP~Cg~   34 (41)
T smart00834        6 YRCEDCGHTFEVLQKI-------SDDP--LATCPECGG   34 (41)
T ss_pred             EEcCCCCCEEEEEEec-------CCCC--CCCCCCCCC
Confidence            6777788776654322       1122  446888775

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=86.31  E-value=0.16  Score=35.36  Aligned_cols=56  Identities=27%  Similarity=0.536  Sum_probs=41.3

Q ss_pred             ccccCCCCcccCChHHHHHHHH--hhcCC--CcccCC--CChhhhcchhHHhhHHhhhcCCC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVK--MEHNS--KSYQCN--ECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~--~~~~~--~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      ++.|..|...|.....+..|..  .|.++  +++.|.  .|++.|.....+..|...+.+..
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  350 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSIS  350 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCC
Confidence            5667777777777777777777  67777  777777  67777777777777766666544

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=86.12  E-value=0.75  Score=20.22  Aligned_cols=9  Identities=22%  Similarity=0.737  Sum_probs=4.1

Q ss_pred             ccccccccc
Q psy12196         33 CNMCSLVLD   41 (150)
Q Consensus        33 c~~c~~~f~   41 (150)
                      |+.|...|.
T Consensus         5 Cp~C~~~y~   13 (36)
T PF13717_consen    5 CPNCQAKYE   13 (36)
T ss_pred             CCCCCCEEe
Confidence            444444443

>KOG2186|consensus

Probab=85.87  E-value=0.31  Score=31.54  Aligned_cols=49  Identities=24%  Similarity=0.555  Sum_probs=36.0

Q ss_pred             eecccccccccChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHhhc
Q psy12196         31 IQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEH   81 (150)
Q Consensus        31 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~   81 (150)
                      |.|..|+....-+ .+..|+.+.+...|.|..|+..|.. .+...|...-+
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccCCeeEEeeccccccc-chhhhhhhhcc
Confidence            6788888877643 5566887777788889889999887 56666655444

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=85.80  E-value=0.19  Score=31.97  Aligned_cols=29  Identities=28%  Similarity=0.504  Sum_probs=21.0

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ..|.|+.|+|.|.-..-+..|+...|+++
T Consensus        76 ~K~~C~lc~KlFkg~eFV~KHI~nKH~e~  104 (214)
T PF04959_consen   76 DKWRCPLCGKLFKGPEFVRKHIFNKHPEK  104 (214)
T ss_dssp             EEEEE-SSS-EESSHHHHHHHHHHH-HHH
T ss_pred             CEECCCCCCcccCChHHHHHHHhhcCHHH
Confidence            36888889998888888888888888653

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=85.79  E-value=0.34  Score=22.30  Aligned_cols=24  Identities=25%  Similarity=0.505  Sum_probs=12.9

Q ss_pred             CcCCcchhhhccC----chHHHHHHHHh
Q psy12196        115 QIQCPYCITDFSE----DKNLIQHIVSV  138 (150)
Q Consensus       115 ~~~C~~C~~~f~~----~~~l~~H~~~~  138 (150)
                      ...|..|++.+..    .+.|.+|++..
T Consensus        16 ~a~C~~C~~~~~~~~~~ts~l~~HL~~~   43 (45)
T PF02892_consen   16 KAKCKYCGKVIKYSSGGTSNLKRHLKKK   43 (45)
T ss_dssp             -EEETTTTEE-----SSTHHHHHHHHHT
T ss_pred             eEEeCCCCeEEeeCCCcHHHHHHhhhhh
Confidence            4567777766654    36777777543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=83.90  E-value=1.1  Score=27.73  Aligned_cols=33  Identities=18%  Similarity=0.460  Sum_probs=21.2

Q ss_pred             CCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhcc
Q psy12196         83 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFS  126 (150)
Q Consensus        83 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~  126 (150)
                      ..-|.|+.|+..|+....+.         .  .|.|+.||....
T Consensus       115 ~~~Y~Cp~C~~rytf~eA~~---------~--~F~Cp~Cg~~L~  147 (178)
T PRK06266        115 NMFFFCPNCHIRFTFDEAME---------Y--GFRCPQCGEMLE  147 (178)
T ss_pred             CCEEECCCCCcEEeHHHHhh---------c--CCcCCCCCCCCe
Confidence            34577877877777665431         1  677888876543

>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria

Probab=83.86  E-value=0.39  Score=21.93  Aligned_cols=31  Identities=19%  Similarity=0.475  Sum_probs=17.3

Q ss_pred             cceecccccccccChHHHHHHHhccCCcccccCCCCc
Q psy12196         29 LSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPS   65 (150)
Q Consensus        29 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~   65 (150)
                      +.|.|..|+..|.....+.      ......|+.|+.
T Consensus         4 Yey~C~~Cg~~fe~~~~~~------~~~~~~CP~Cg~   34 (42)
T PF09723_consen    4 YEYRCEECGHEFEVLQSIS------EDDPVPCPECGS   34 (42)
T ss_pred             EEEEeCCCCCEEEEEEEcC------CCCCCcCCCCCC
Confidence            3477777777765332211      134556777775

The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB []. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=83.11  E-value=0.51  Score=23.26  Aligned_cols=8  Identities=38%  Similarity=0.962  Sum_probs=4.4

Q ss_pred             CcCCcchh
Q psy12196        115 QIQCPYCI  122 (150)
Q Consensus       115 ~~~C~~C~  122 (150)
                      +|.|+.||
T Consensus        48 ~Y~CP~CG   55 (59)
T PRK14890         48 PYTCPKCG   55 (59)
T ss_pred             ceECCCCC
Confidence            55555554

>smart00531 TFIIE Transcription initiation factor IIE

Probab=82.08  E-value=1.3  Score=26.42  Aligned_cols=39  Identities=23%  Similarity=0.595  Sum_probs=22.0

Q ss_pred             CCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhcc
Q psy12196         82 NSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFS  126 (150)
Q Consensus        82 ~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~  126 (150)
                      +..-|.|+.|+..|.....+..    ...++  .|.||.||....
T Consensus        96 ~~~~Y~Cp~C~~~y~~~ea~~~----~d~~~--~f~Cp~Cg~~l~  134 (147)
T smart00531       96 NNAYYKCPNCQSKYTFLEANQL----LDMDG--TFTCPRCGEELE  134 (147)
T ss_pred             CCcEEECcCCCCEeeHHHHHHh----cCCCC--cEECCCCCCEEE
Confidence            3445778888777765433221    01133  578888876643

>PF04780 DUF629: Protein of unknown function (DUF629); InterPro: IPR006865 This domain represents a region of several plant proteins of unknown function

Probab=81.70  E-value=0.96  Score=32.33  Aligned_cols=29  Identities=24%  Similarity=0.480  Sum_probs=24.8

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      -|.|+.|.+.|.+...+..|+...|.++-
T Consensus        57 FWiCp~CskkF~d~~~~~~H~~~eH~~~l   85 (466)
T PF04780_consen   57 FWICPRCSKKFSDAESCLSHMEQEHPAGL   85 (466)
T ss_pred             EeeCCcccceeCCHHHHHHHHHHhhhhhc
Confidence            46899999999999999999998885543

A C2H2 zinc finger is predicted in this region in some family members, but the spacing between the cysteine residues is not conserved throughout the family.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=81.12  E-value=1.2  Score=20.71  Aligned_cols=10  Identities=20%  Similarity=0.663  Sum_probs=5.6

Q ss_pred             eecccccccc
Q psy12196         31 IQCNMCSLVL   40 (150)
Q Consensus        31 ~~c~~c~~~f   40 (150)
                      |.|+.|+..|
T Consensus         4 y~C~~CG~~~   13 (46)
T PRK00398          4 YKCARCGREV   13 (46)
T ss_pred             EECCCCCCEE
Confidence            5555555554

>PF14353 CpXC: CpXC protein

Probab=81.06  E-value=2.4  Score=24.59  Aligned_cols=21  Identities=24%  Similarity=0.494  Sum_probs=12.0

Q ss_pred             cceecccccccccChHHHHHH
Q psy12196         29 LSIQCNMCSLVLDSKESLVTH   49 (150)
Q Consensus        29 ~~~~c~~c~~~f~~~~~l~~h   49 (150)
                      ..+.|+.||..|.-...+..|
T Consensus        37 ~~~~CP~Cg~~~~~~~p~lY~   57 (128)
T PF14353_consen   37 FSFTCPSCGHKFRLEYPLLYH   57 (128)
T ss_pred             CEEECCCCCCceecCCCEEEE
Confidence            346677777766554444444

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=80.61  E-value=1.3  Score=25.60  Aligned_cols=30  Identities=7%  Similarity=-0.084  Sum_probs=16.0

Q ss_pred             eecccccccccChHHHHHHHhccCCcccccCCCCcccCCh
Q psy12196         31 IQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNS   70 (150)
Q Consensus        31 ~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~   70 (150)
                      ..|+.|++.|..          ....|..||.||..|...
T Consensus        10 r~Cp~cg~kFYD----------Lnk~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        10 RICPNTGSKFYD----------LNRRPAVSPYTGEQFPPE   39 (129)
T ss_pred             ccCCCcCccccc----------cCCCCccCCCcCCccCcc
Confidence            356666666642          112445566666665444

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>KOG2785|consensus

Probab=80.60  E-value=3.4  Score=28.69  Aligned_cols=24  Identities=25%  Similarity=0.448  Sum_probs=15.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHh
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      ++.|..|.+.|....+...|+.+.
T Consensus        68 ~~~c~~c~k~~~s~~a~~~hl~Sk   91 (390)
T KOG2785|consen   68 VVYCEACNKSFASPKAHENHLKSK   91 (390)
T ss_pred             ceehHHhhccccChhhHHHHHHHh
Confidence            556777777777666666666554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	150
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-05

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Query: 31  IQCNMCSLVLDSKESLVTHISQTHTLM--FTCRRCPSTFLNSATLSKHVKMEHNSKSYQC 88
            +C  C      K+ L  H  +THT    + C  C  +F   A L  H +     K Y C
Sbjct: 50  YKCPECGKSFSDKKDLTRH-QRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYAC 108
Query: 89  NECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE 143
            EC +SF +L  L+ H  Q  +      +CP C   FS + NL  H    H G++
Sbjct: 109 PECGKSFSQLAHLRAH--QRTHTGEKPYKCPECGKSFSREDNLHTH-QRTHTGEK 160

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 58  FTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQ 117
           F C+ C  +F  S+TLS H+ +  +++ Y C  C + F + + +K+H F    +  H  +
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH--K 59
Query: 118 CPYCITDFSEDKNLIQH 134
           C  C   FS+  NLI H
Sbjct: 60  CQVCGKAFSQSSNLITH 76

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 58  FTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQ 117
           + C  C  +F  S+ L KH +     K Y+C EC +SF + + L++H  Q  +      +
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKH--QRTHTGEKPYK 62
Query: 118 CPYCITDFSEDKNLIQH 134
           CP C   FS   +L +H
Sbjct: 63  CPECGKSFSRSDHLSRH 79

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	150
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	9e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	7e-04

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.1 bits (95), Expect = 1e-05
 Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 4/119 (3%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHN 82
           ++ +    I  ++    L     L     +    +          L+ ++    +     
Sbjct: 12  KYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKA 71

Query: 83  SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG 141
              + C  C   F     LK+H         H   CP C  +F+   + + H+   H  
Sbjct: 72  ISQFVCPLCLMPFSSSVSLKQHIRYTE----HTKVCPVCKKEFTSTDSALDHVCKKHNI 126

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 17/58 (29%), Positives = 27/58 (46%)

Query: 84  KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG 141
           K Y+C  C   F +   +K H  Q H ++V +  CP+C T  +   +L  H+   H  
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 58  FTCRRCPSTFLNSATLSKHVKMEH--NSKSYQCNECPESFERLNKLKRHKFQAH 109
           + C  C + F  S T+  H+  +H  N   + C  C     R + L  H  + H
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.9 bits (92), Expect = 4e-05
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 32  QCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNEC 91
           QC +C+  L S     +H          C  C   F +     +H + +   K   C EC
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRNA-AVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLEC 75

Query: 92  PESFERLNKLKRHKFQAHN 110
             +F+    + RH+ + HN
Sbjct: 76  MRTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 36.0 bits (82), Expect = 9e-04
 Identities = 24/93 (25%), Positives = 32/93 (34%), Gaps = 4/93 (4%)

Query: 2   SCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCR 61
            C  C+    +      H  L   A      C  CSL   S E    H S+      TC 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRNAA----VCPYCSLRFFSPELKQEHESKCEYKKLTCL 73

Query: 62  RCPSTFLNSATLSKHVKMEHNSKSYQCNECPES 94
            C  TF +S ++ +H    HN  +      P S
Sbjct: 74  ECMRTFKSSFSIWRHQVEVHNQNNMAPTSGPSS 106

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 38.6 bits (91), Expect = 6e-05
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 32  QCNMCSLVLDSKESLVTHISQTHT--LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCN 89
           QC +C       + L THI +THT    F C  C   F  S    +H +   +      +
Sbjct: 5   QCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRH-RDIQHILPILED 62

Query: 90  ECPESFERLNKLKRHK 105
           +  E   +   L+   
Sbjct: 63  KVEELLSKNYHLENEV 78

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 9e-05
 Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 6/86 (6%)

Query: 30  SIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRC------PSTFLNSATLSKHVKMEHNS 83
             +C  CS   D+   L  H+++T                  +     +L +    E   
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78

Query: 84  KSYQCNECPESFERLNKLKRHKFQAH 109
           K  +C  C  SFE L  L  H  +  
Sbjct: 79  KVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 36.3 bits (83), Expect = 8e-04
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 58  FTCRRCPSTFLNSATLSKHVKMEH-----NSKSYQCNECPESFERLNKLKRHKFQAHNDS 112
           F C+ C + +     L+ H+         N ++   N    S  R   L   + +     
Sbjct: 20  FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79

Query: 113 VHQIQCPYCITDFSEDKNLIQHIVSVHLGKE 143
           V +  C YC   F   ++L  H++     ++
Sbjct: 80  VLK--CMYCGHSFESLQDLSVHMIKTKHYQK 108

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.4 bits (87), Expect = 1e-04
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 58  FTCRRCPSTFLNSATLSKHVK---MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVH 114
             C  C  T    A+L+ H +       +  + C  C + FE+ + +  H+ ++H   + 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 115 QIQCP 119
             Q  
Sbjct: 68  APQES 72

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 36.9 bits (85), Expect = 2e-04
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 69  NSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSED 128
           +S +  K  K+    +S +C++C   F R + L R K            C  C  D  ++
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK---------TPMCEKCRKDSCQE 52

Query: 129 KNLIQHIVSVHLGKEGTAPA 148
             L +       GK+ + P+
Sbjct: 53  AALNKD-EGNESGKKTSGPS 71

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 13/52 (25%), Positives = 25/52 (48%)

Query: 84  KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHI 135
            +Y+C  C   +  ++   RH   +H  +V    CP+C  +F+   N+  H+
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.0 bits (84), Expect = 4e-04
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 58  FTCRRCPSTFLNSATLSKHVKMEH--NSKSYQCNECPESFERLNKLKRHK 105
           + C+ C   + + +   +H    H  N K Y C  C + F R + +  H 
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 37.9 bits (87), Expect = 7e-04
 Identities = 12/92 (13%), Positives = 22/92 (23%), Gaps = 4/92 (4%)

Query: 23  EHKATSLSIQCNMCSLVLDSKESLVTH---ISQTHTLMFTCRRCPSTFLNSATLSKHVKM 79
           + KA        + +    S+   V +    +Q            +              
Sbjct: 115 KSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPT 174

Query: 80  EHNSKSYQCNECPESFERLNKLKRHKFQAHND 111
             +   YQC+ C         L  H   +H  
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAHV-ASHGL 205

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	150
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.95
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.95
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.94
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.94
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.89
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.89
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.89
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.88
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.86
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.85
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.85
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.82
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.81
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.79
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.76
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.76
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.75
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.75
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.74
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.73
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.72
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.72
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.71
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.7
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.7
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.68
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.68
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.68
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.66
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.65
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.65
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.65
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.64
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.64
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.64
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.63
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.63
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.61
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.6
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.6
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.59
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.58
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.58
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.56
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.56
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.55
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.53
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.52
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.51
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.44
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.44
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.41
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.38
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.37
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.37
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.36
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.36
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.36
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.36
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.35
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.35
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.35
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.34
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.34
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.34
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.34
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.33
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.32
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.32
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.32
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.31
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.31
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.31
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.3
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.29
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.29
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.28
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.26
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.26
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.25
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.25
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.25
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.25
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.24
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.22
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.2
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.2
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.2
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.19
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.18
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.17
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.16
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.16
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.14
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.11
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	99.1
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.07
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.06
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.02
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.01
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.99
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.96
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.92
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.9
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.89
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.88
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.86
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.85
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.85
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.84
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.84
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.8
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.79
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.78
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.78
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.77
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.76
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.74
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.74
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	98.2
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.71
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.71
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.7
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.69
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.68
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.13
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.67
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.67
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.66
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.63
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.63
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.62
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.62
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.58
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.57
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.56
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.96
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.5
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.5
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.49
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.46
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.46
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.44
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.44
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.44
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.41
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.41
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.4
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.37
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.36
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.35
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.35
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.33
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.65
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.31
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.63
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.26
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.5
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.01
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.72
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.57
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.06
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.99
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.93
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.87
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	96.86
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.74
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.58
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.76
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.45
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.88
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	92.77
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	92.52
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	92.27
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	92.02
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	90.47
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	89.97
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	89.65
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	89.04
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	88.88
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	88.74
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.14
1e8j_A	52	Rubredoxin; iron-sulfur-protein, zinc-substitution	86.03
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	84.96
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	84.93
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	83.64
1wvk_A	86	AT2G23090/F21P24.15; structural genomics, protein	83.45
1vq8_Z	83	50S ribosomal protein L37AE; ribosome 50S, protein	81.4
2kn9_A	81	Rubredoxin; metalloprotein, ssgcid, structural gen	80.68
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	80.66

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=4.8e-35  Score=179.91  Aligned_cols=139  Identities=24%  Similarity=0.476  Sum_probs=82.6

Q ss_pred             CCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhcc-CCcccccCCCCcccCChHHHHHHHHhh
Q psy12196          2 SCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKME   80 (150)
Q Consensus         2 ~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~-~~~~~~c~~c~~~f~~~~~l~~h~~~~   80 (150)
                      .|+.|++.|.+...|..|+..++  +..+|.|+.|++.|.....|..|+... ..++|.|+.|++.|.+...|..|+..|
T Consensus        51 ~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  128 (190)
T 2i13_A           51 KCPECGKSFSDKKDLTRHQRTHT--GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH  128 (190)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cCCCcCchhCCHHHHHHHHHhcC--CCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHh
Confidence            46666666666666666665533  334466666666666666666665322 235666666666666666666666666


Q ss_pred             cCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196         81 HNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus        81 ~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      +++++|.|.+|++.|.....|..|+++|++++  +|.|+.|++.|.....|..|+++|++++||
T Consensus       129 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~--~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          129 TGEKPYKCPECGKSFSREDNLHTHQRTHTGEK--PYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HCCCCEECTTTCCEESCHHHHHHHHHHHHCCC--CEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHhcCCCC--CeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            66666666666666666666666666666655  666666666666666666666666666654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.3e-34  Score=177.93  Aligned_cols=143  Identities=25%  Similarity=0.492  Sum_probs=123.6

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhcc-CCcccccCCCCcccCChHHHHHHHHh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKM   79 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~-~~~~~~c~~c~~~f~~~~~l~~h~~~   79 (150)
                      |.|+.|++.|.....|..|+..++  +..+|.|+.|++.|.....|..|+... ..++|.|+.|++.|.....|..|+..
T Consensus        22 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           22 YACPECGKSFSRSDHLAEHQRTHT--GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             ---------CCSSHHHHHGGGCC-----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHcC--CCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHh
Confidence            679999999999999999988743  456799999999999999999998443 34899999999999999999999999


Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |.++++|.|.+|++.|.....|..|+.+|++++  +|.|+.|++.|.....|..|+++|++++||.|+
T Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A          100 HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEK--PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             HHTCCCEECTTTCCEESSHHHHHHHHHHHHCCC--CEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCC--CeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            999999999999999999999999999999988  999999999999999999999999999999886

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.97  E-value=4.4e-30  Score=153.07  Aligned_cols=138  Identities=20%  Similarity=0.434  Sum_probs=121.7

Q ss_pred             CCCCcccccccCHHHHHHHHHHHh-hCCCcceeccc-----ccccccChHHHHHHHhcc-CCcccccCC--CCcccCChH
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEH-KATSLSIQCNM-----CSLVLDSKESLVTHISQT-HTLMFTCRR--CPSTFLNSA   71 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~-~~~~~~~~c~~-----c~~~f~~~~~l~~h~~~~-~~~~~~c~~--c~~~f~~~~   71 (150)
                      |.|+.|++.|.+...|..|+...+ ..+.++|.|+.     |++.|.....|..|+... ..++|.|+.  |++.|.+..
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE   83 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHH
Confidence            679999999999999999998533 22566788764     359999999999997433 348999985  999999999


Q ss_pred             HHHHHHHhhcCCCcccCCC--ChhhhcchhHHhhHH-hhhcCCCCCCcCCcc--hhhhccCchHHHHHHHHhcC
Q psy12196         72 TLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHK-FQAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus        72 ~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~-~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  140 (150)
                      .|..|++.|+++++|.|.+  |++.|...+.|..|+ ..|.+++  +|.|+.  |++.|...+.|..|+++|||
T Consensus        84 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~--~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           84 NLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK--PYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCC--CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCC--CeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999999999999999998  999999999999998 6788777  999988  99999999999999999985

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=8.4e-30  Score=156.53  Aligned_cols=136  Identities=25%  Similarity=0.466  Sum_probs=120.6

Q ss_pred             CCC--CcccccccCHHHHHHHHHHHhhCCCcceec--ccccccccChHHHHHHHhccC-CcccccC--CCCcccCChHHH
Q psy12196          1 MSC--VPCDVLFHNKATLYKHLYLEHKATSLSIQC--NMCSLVLDSKESLVTHISQTH-TLMFTCR--RCPSTFLNSATL   73 (150)
Q Consensus         1 ~~C--~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c--~~c~~~f~~~~~l~~h~~~~~-~~~~~c~--~c~~~f~~~~~l   73 (150)
                      |.|  +.|++.|.+...|..|++.++  +..+|.|  +.|++.|.....|..|+.... +++|.|+  .|++.|.+...|
T Consensus        13 ~~C~~~~C~~~f~~~~~L~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           13 YICSFADCGAAYNKNWKLQAHLCKHT--GEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CBCSSTTTCCBCSSHHHHHHHHHHHH--CCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             eeCCCCCCcchhCCHHHHHHHHHhcC--CCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHH
Confidence            578  689999999999999998854  4567899  889999999999999984333 3789999  899999999999


Q ss_pred             HHHH-Hhh-cCCCcccC--CCChhhhcchhHHhhHHhhhcCCCCCCcCCcc--hhhhccCchHHHHHHHHhcC
Q psy12196         74 SKHV-KME-HNSKSYQC--NECPESFERLNKLKRHKFQAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus        74 ~~h~-~~~-~~~~~~~c--~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~  140 (150)
                      ..|+ ..| .++++|.|  .+|++.|.....|..|+++|++++  +|.|+.  |++.|...+.|..|+++|++
T Consensus        91 ~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           91 KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQL--PYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSC--SSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCC--CccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            9999 566 46789999  889999999999999999998887  999988  99999999999999999887

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1.7e-29  Score=155.10  Aligned_cols=134  Identities=21%  Similarity=0.445  Sum_probs=121.1

Q ss_pred             CCC--CcccccccCHHHHHHHHHHHhhCCCcceecc--cccccccChHHHHHHHhccC---Cccccc--CCCCcccCChH
Q psy12196          1 MSC--VPCDVLFHNKATLYKHLYLEHKATSLSIQCN--MCSLVLDSKESLVTHISQTH---TLMFTC--RRCPSTFLNSA   71 (150)
Q Consensus         1 ~~C--~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~---~~~~~c--~~c~~~f~~~~   71 (150)
                      |.|  +.|++.|.....|..|+++++  +..+|.|.  .|++.|.....|..|+...+   ..+|.|  +.|++.|.+..
T Consensus        43 ~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~  120 (190)
T 1tf6_A           43 FPCKEEGCEKGFTSLHHLTRHSLTHT--GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN  120 (190)
T ss_dssp             SCCSSTTCCCCCSSHHHHHHHHTTTT--TCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHH
T ss_pred             ccCCCCCCChhhCCHHHHHHHHHHcc--CCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHH
Confidence            578  889999999999999998844  45679999  89999999999999985555   378999  88999999999


Q ss_pred             HHHHHHHhhcCCCcccCCC--ChhhhcchhHHhhHHhhhcCCCCCCcCCcc---hhhhccCchHHHHHHHHhcCC
Q psy12196         72 TLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCPY---CITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus        72 ~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      .|..|+++|+++++|.|.+  |++.|...+.|..|+++|++     |.|+.   |++.|.....|..|+++|+++
T Consensus       121 ~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-----~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             HHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS-----CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             HHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC-----CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            9999999999999999988  99999999999999988776     78999   999999999999999999875

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.95  E-value=4.5e-28  Score=139.36  Aligned_cols=116  Identities=23%  Similarity=0.493  Sum_probs=101.1

Q ss_pred             Ccceecc--cccccccChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCC--ChhhhcchhHHhh
Q psy12196         28 SLSIQCN--MCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKR  103 (150)
Q Consensus        28 ~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~  103 (150)
                      +.+|.|+  .|++.|.....|..|+.....++|.|+.|++.|.....|..|+..|.++++|.|.+  |++.|.....|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            4568999  89999999999999985555689999999999999999999999999999999986  9999999999999


Q ss_pred             HHhhhcCCCCCCcCCc--chhhhccCchHHHHHHHHhcCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCP--YCITDFSEDKNLIQHIVSVHLGKEGT  145 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~  145 (150)
                      |+++|++++  +|.|+  .|++.|.....|..|+++|+++++++
T Consensus        83 H~~~h~~~~--~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           83 HVRIHTGDR--PYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHCCC--CCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHhCCCC--ceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            999999988  99996  59999999999999999999998875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.95  E-value=8.2e-28  Score=143.22  Aligned_cols=119  Identities=24%  Similarity=0.449  Sum_probs=107.5

Q ss_pred             CCcceecccccccccChHHHHHHHhccCC--cc--------cccCCCCcccCChHHHHHHHHhhcCCCcccCCC--Chhh
Q psy12196         27 TSLSIQCNMCSLVLDSKESLVTHISQTHT--LM--------FTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNE--CPES   94 (150)
Q Consensus        27 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~--~~--------~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~--c~~~   94 (150)
                      ....|.|..|++.|.....|..|+...|.  .+        +.|+.|++.|.....|..|+..|+++++|.|.+  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            45568889999999999999999754343  22        789999999999999999999999999999998  9999


Q ss_pred             hcchhHHhhHHhhhcCCCCCCcCCcc--hhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196         95 FERLNKLKRHKFQAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus        95 ~~~~~~l~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |.....|..|+++|++++  +|.|+.  |++.|.....|..|+++|++++||.|.
T Consensus       102 f~~~~~L~~H~~~h~~~~--~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEK--PFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSC--SBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cCCHHHHHHHHHhhCCCC--CccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999999999999998887  999997  999999999999999999999999885

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=1.2e-26  Score=133.32  Aligned_cols=113  Identities=24%  Similarity=0.530  Sum_probs=94.9

Q ss_pred             CCcceecccccccccChHHHHHHHhccC-CcccccCCCCcccCChHHHHHHHHh---hcCCCcccCCCChhhhcchhHHh
Q psy12196         27 TSLSIQCNMCSLVLDSKESLVTHISQTH-TLMFTCRRCPSTFLNSATLSKHVKM---EHNSKSYQCNECPESFERLNKLK  102 (150)
Q Consensus        27 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~-~~~~~c~~c~~~f~~~~~l~~h~~~---~~~~~~~~c~~c~~~~~~~~~l~  102 (150)
                      +..+|.|+.|++.|.....|..|+.... +++|.|+.|++.|.....|..|+..   +.++++|.|.+|++.|.....|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            4566888888888888888888874333 3788899999999999899999885   56788899999999999999999


Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      .|+++|++++  +|.|+.|++.|.....|..|++..|++
T Consensus        84 ~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           84 LHMVSHTGEM--PYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHSSSC--SEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHcCCCC--CccCCCccchhCCHHHHHHHHHHHCCC
Confidence            9998888877  899999999999999999999876644

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.94  E-value=7.6e-27  Score=135.19  Aligned_cols=102  Identities=20%  Similarity=0.314  Sum_probs=71.0

Q ss_pred             CCcceecccccccccChHHHHHHHhcc-CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHH
Q psy12196         27 TSLSIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHK  105 (150)
Q Consensus        27 ~~~~~~c~~c~~~f~~~~~l~~h~~~~-~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~  105 (150)
                      ++++|.|+.|++.|.....|..|+... .+++|.|++|++.|.....|..|+.+|+++++|.|.+||+.|...+.|..|+
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   98 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHI   98 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHh
Confidence            456677777777777777777776322 2467777777777777777777777777777777777777777777777777


Q ss_pred             hhhcCCC----CCCcCCcchhhhccCc
Q psy12196        106 FQAHNDS----VHQIQCPYCITDFSED  128 (150)
Q Consensus       106 ~~~~~~~----~~~~~C~~C~~~f~~~  128 (150)
                      +++++++    .++|+|..|++.|...
T Consensus        99 ~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           99 KSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            7766553    2356677777766543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.93  E-value=2.4e-26  Score=131.21  Aligned_cols=110  Identities=23%  Similarity=0.495  Sum_probs=98.3

Q ss_pred             CCcceeccc--ccccccChHHHHHHHhcc-CCcccccC--CCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHH
Q psy12196         27 TSLSIQCNM--CSLVLDSKESLVTHISQT-HTLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKL  101 (150)
Q Consensus        27 ~~~~~~c~~--c~~~f~~~~~l~~h~~~~-~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l  101 (150)
                      +.++|.|..  |++.|.....|..|+... ..++|.|+  .|++.|.+...|..|+..|+++++|.|.+|++.|.....|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            456788986  999999999999997433 34889998  7999999999999999999999999999999999999999


Q ss_pred             hhHHhhhcCCCCCCcCC--cchhhhccCchHHHHHHHHh
Q psy12196        102 KRHKFQAHNDSVHQIQC--PYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       102 ~~h~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  138 (150)
                      ..|++.|++++  +|.|  +.|++.|.....|..|+++|
T Consensus        83 ~~H~~~h~~~~--~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEK--PFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCC--CEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCC--CeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999888  8999  89999999999999999865

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=7.6e-25  Score=125.77  Aligned_cols=108  Identities=25%  Similarity=0.494  Sum_probs=97.9

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhc----cCCcccccCCCCcccCChHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQ----THTLMFTCRRCPSTFLNSATLSKH   76 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~----~~~~~~~c~~c~~~f~~~~~l~~h   76 (150)
                      |.|+.|++.|.+...|..|++.++  +..+|.|+.|++.|.....|..|+..    ....+|.|+.|++.|.....|..|
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H   85 (124)
T 2dlq_A            8 VECPTCHKKFLSKYYLKVHNRKHT--GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH   85 (124)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHS--SCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHH
T ss_pred             CCCCCCCCcCCCHHHHHHHHHhCC--CCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHH
Confidence            689999999999999999998854  45679999999999999999999853    234899999999999999999999


Q ss_pred             HHhhcCCCcccCCCChhhhcchhHHhhHHhhhcC
Q psy12196         77 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN  110 (150)
Q Consensus        77 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~  110 (150)
                      +..|+++++|.|.+|++.|.....|..|+...+.
T Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           86 MVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             HHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             HHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            9999999999999999999999999999975443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=1.8e-25  Score=133.09  Aligned_cols=117  Identities=23%  Similarity=0.364  Sum_probs=103.7

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhhCCCc-------ceecccccccccChHHHHHHHhcc-CCcccccCC--CCcccCCh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHKATSL-------SIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRR--CPSTFLNS   70 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~~~~~-------~~~c~~c~~~f~~~~~l~~h~~~~-~~~~~~c~~--c~~~f~~~   70 (150)
                      |.|..|++.|.+...|..|+..+|.....       .|.|+.|++.|.....|..|+... .+++|.|+.  |++.|...
T Consensus        26 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  105 (155)
T 2rpc_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARS  105 (155)
T ss_dssp             SSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCH
T ss_pred             cccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCH
Confidence            57999999999999999999875542221       178999999999999999997433 348999998  99999999


Q ss_pred             HHHHHHHHhhcCCCcccCCC--ChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         71 ATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        71 ~~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      ..|..|++.|+++++|.|.+  |++.|.....|..|+++|++++  +|.|.
T Consensus       106 ~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k--~~~c~  154 (155)
T 2rpc_A          106 ENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK--SGPSS  154 (155)
T ss_dssp             HHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCC--CSCSC
T ss_pred             HHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCC--CCCCC
Confidence            99999999999999999997  9999999999999999999887  88885

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=5.6e-25  Score=130.90  Aligned_cols=118  Identities=25%  Similarity=0.392  Sum_probs=105.7

Q ss_pred             cceecccccccccChHHHHHHHhc--cC--CcccccCC-----CCcccCChHHHHHHHHhhcCCCcccCCC--Chhhhcc
Q psy12196         29 LSIQCNMCSLVLDSKESLVTHISQ--TH--TLMFTCRR-----CPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFER   97 (150)
Q Consensus        29 ~~~~c~~c~~~f~~~~~l~~h~~~--~~--~~~~~c~~-----c~~~f~~~~~l~~h~~~~~~~~~~~c~~--c~~~~~~   97 (150)
                      .++.|..|++.|.+...|..|+..  .+  .++|.|+.     |++.|.+...|..|+..|+++++|.|.+  |++.|..
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            458899999999999999999852  33  37888764     3599999999999999999999999985  9999999


Q ss_pred             hhHHhhHHhhhcCCCCCCcCCcc--hhhhccCchHHHHHH-HHhcCCCCCCCCC
Q psy12196         98 LNKLKRHKFQAHNDSVHQIQCPY--CITDFSEDKNLIQHI-VSVHLGKEGTAPA  148 (150)
Q Consensus        98 ~~~l~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~~~  148 (150)
                      ...|..|++.|++++  +|.|+.  |++.|.....|..|+ ..|.++++|.|+.
T Consensus        82 ~~~l~~H~~~h~~~~--~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  133 (155)
T 2gli_A           82 LENLKTHLRSHTGEK--PYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL  133 (155)
T ss_dssp             HHHHHHHHHHTTTCC--CEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCS
T ss_pred             HHHHHHHHHHcCCCC--CeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCC
Confidence            999999999998887  999998  999999999999999 7888999998863

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.92  E-value=1.2e-24  Score=121.80  Aligned_cols=92  Identities=23%  Similarity=0.509  Sum_probs=87.6

Q ss_pred             CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHH
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQH  134 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  134 (150)
                      .++|.|+.|++.|.....|..|+..|.++++|.|.+|++.|.....|..|+..|++++  +|.|+.|++.|.....|..|
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEK--PFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCC--TTSCSSSCCCCSSHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCC--CeECCCcCCcccCHHHHHHH
Confidence            4789999999999999999999999999999999999999999999999999998887  99999999999999999999


Q ss_pred             HHHhcCCCCCCCCC
Q psy12196        135 IVSVHLGKEGTAPA  148 (150)
Q Consensus       135 ~~~~~~~~~~~~~~  148 (150)
                      +++|+++++|.+++
T Consensus        93 ~~~H~~~~~~~~~s  106 (106)
T 2ee8_A           93 KTLHMQTSSPTAAS  106 (106)
T ss_dssp             HHHTTSCCCCCCCC
T ss_pred             HHHhCCCCCCcCCC
Confidence            99999999998764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.92  E-value=2.1e-25  Score=129.13  Aligned_cols=91  Identities=21%  Similarity=0.453  Sum_probs=86.0

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHH
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQ  133 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  133 (150)
                      ++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++|++.|...+.|..
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~C~k~F~~~~~L~~   96 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGER--RYQCLACGKSFINYQFMSS   96 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCC--CEEESSSCCEESSHHHHHH
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCc--cccCCCCCCCcCCHHHHHH
Confidence            45899999999999999999999999999999999999999999999999999999988  9999999999999999999


Q ss_pred             HHHHhcCCCCCCC
Q psy12196        134 HIVSVHLGKEGTA  146 (150)
Q Consensus       134 H~~~~~~~~~~~~  146 (150)
                      |++++|+++|+.+
T Consensus        97 H~~~hh~~~p~~~  109 (133)
T 2lt7_A           97 HIKSVHSQDPSGD  109 (133)
T ss_dssp             HHHHHTCCCTTSS
T ss_pred             HhHHhcCCCCCCC
Confidence            9999999887543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=7e-24  Score=120.92  Aligned_cols=106  Identities=23%  Similarity=0.486  Sum_probs=95.9

Q ss_pred             CCCCc--ccccccCHHHHHHHHHHHhhCCCcceecc--cccccccChHHHHHHHhcc-CCcccccCCCCcccCChHHHHH
Q psy12196          1 MSCVP--CDVLFHNKATLYKHLYLEHKATSLSIQCN--MCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSK   75 (150)
Q Consensus         1 ~~C~~--C~~~f~~~~~l~~h~~~~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~-~~~~~~c~~c~~~f~~~~~l~~   75 (150)
                      |.|..  |++.|.+...|..|+..++  +..+|.|+  .|++.|.....|..|+... .+++|.|+.|++.|.....|..
T Consensus         7 ~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   84 (119)
T 2jp9_A            7 FMCAYPGCNKRYFKLSHLQMHSRKHT--GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKT   84 (119)
T ss_dssp             BCCCSTTSCCCBSCHHHHHHHHHHHH--TTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             eeCCCCCCcchhCCHHHHHHHHHhhC--CCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHH
Confidence            67987  9999999999999999854  45679999  7999999999999998443 3589999999999999999999


Q ss_pred             HHHhhcCCCcccC--CCChhhhcchhHHhhHHhhh
Q psy12196         76 HVKMEHNSKSYQC--NECPESFERLNKLKRHKFQA  108 (150)
Q Consensus        76 h~~~~~~~~~~~c--~~c~~~~~~~~~l~~h~~~~  108 (150)
                      |++.|+++++|.|  ..|++.|.....|..|+++|
T Consensus        85 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           85 HTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999  89999999999999998764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=3.7e-24  Score=122.95  Aligned_cols=109  Identities=23%  Similarity=0.483  Sum_probs=96.2

Q ss_pred             CCCC--cccccccCHHHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhccC-CcccccCC--CCcccCChHHHHH
Q psy12196          1 MSCV--PCDVLFHNKATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQTH-TLMFTCRR--CPSTFLNSATLSK   75 (150)
Q Consensus         1 ~~C~--~C~~~f~~~~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~-~~~~~c~~--c~~~f~~~~~l~~   75 (150)
                      |.|+  .|++.|.+...|..|+.. |  +..+|.|..|++.|.....|..|+.... +++|.|+.  |++.|.....|..
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~-h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            6 IACPHKGCTKMFRDNSAMRKHLHT-H--GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHGG-G--SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHH-c--CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            5688  899999999999999987 4  5667999999999999999999984333 38999986  9999999999999


Q ss_pred             HHHhhcCCCcccCC--CChhhhcchhHHhhHHhhhcCCC
Q psy12196         76 HVKMEHNSKSYQCN--ECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        76 h~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      |++.|+++++|.|.  .|++.|...+.|..|+++|++++
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            99999999999995  59999999999999999998876

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=1.2e-23  Score=115.57  Aligned_cols=90  Identities=18%  Similarity=0.353  Sum_probs=82.7

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHH
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQ  133 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  133 (150)
                      ..++|.|++|++.|.....|..|+..|.++++|.|.+|++.|.....|..|+..|++++  +|.|+.|++.|.....|..
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER--PFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCC--CEECSSSSCEESSHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCC--CccCCCCCCccCCHHHHHH
Confidence            34789999999999999999999999999999999999999999999999999988877  9999999999999999999


Q ss_pred             HHHHhcCCCCCC
Q psy12196        134 HIVSVHLGKEGT  145 (150)
Q Consensus       134 H~~~~~~~~~~~  145 (150)
                      |+++|+++++..
T Consensus        83 H~~~h~~~~~p~   94 (96)
T 2dmd_A           83 HLRSHTGDSGPS   94 (96)
T ss_dssp             HHTTCCSCCCCC
T ss_pred             HHHHhcCCCCCC
Confidence            999999887643

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.89  E-value=1.8e-23  Score=113.63  Aligned_cols=87  Identities=22%  Similarity=0.504  Sum_probs=78.9

Q ss_pred             CcccccC--CCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHH
Q psy12196         55 TLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLI  132 (150)
Q Consensus        55 ~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  132 (150)
                      +++|.|+  .|++.|.....|..|+..|.++++|.|..|++.|.....|..|+..|++++  +|.|+.|++.|.....|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK--PFACDICGRKFARSDERK   79 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC--CEECTTTCCEESSHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCC--CccCCCCCchhCCHHHHH
Confidence            4688998  599999999999999999999999999999999999999999999999887  999999999999999999


Q ss_pred             HHHHHhcCCCC
Q psy12196        133 QHIVSVHLGKE  143 (150)
Q Consensus       133 ~H~~~~~~~~~  143 (150)
                      .|+++|+++++
T Consensus        80 ~H~~~H~~~k~   90 (90)
T 1a1h_A           80 RHTKIHLRQKD   90 (90)
T ss_dssp             HHHGGGGC---
T ss_pred             HHHHHhcccCC
Confidence            99999998763

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.89  E-value=2.8e-23  Score=110.94  Aligned_cols=82  Identities=29%  Similarity=0.629  Sum_probs=77.3

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHH
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIV  136 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  136 (150)
                      ||.|+.|++.|.....|..|+..|.++++|.|.+|++.|.....|..|+..+++++  +|.|+.|++.|.....|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEK--PHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCC--CEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCC--CCcCCCcchhhCChHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999887  9999999999999999999999


Q ss_pred             HhcC
Q psy12196        137 SVHL  140 (150)
Q Consensus       137 ~~~~  140 (150)
                      +|+|
T Consensus        79 ~H~g   82 (82)
T 2kmk_A           79 KHTG   82 (82)
T ss_dssp             HHC-
T ss_pred             hhCC
Confidence            9875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.7e-22  Score=110.80  Aligned_cols=89  Identities=25%  Similarity=0.441  Sum_probs=80.2

Q ss_pred             cCCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHH
Q psy12196         53 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLI  132 (150)
Q Consensus        53 ~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~  132 (150)
                      ..+++|.|++|++.|.....|..|+..|.++++|.|.+|++.|.....|..|++.++++..++|.|+.|++.|.....|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            34578999999999999999999999999999999999999999999999999999887445999999999999999999


Q ss_pred             HHHHHhcCC
Q psy12196        133 QHIVSVHLG  141 (150)
Q Consensus       133 ~H~~~~~~~  141 (150)
                      .|++..|.+
T Consensus        83 ~H~~~~H~~   91 (95)
T 2yt9_A           83 GHIKQVHSG   91 (95)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHhcCC
Confidence            999755533

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=6e-22  Score=110.91  Aligned_cols=89  Identities=15%  Similarity=0.327  Sum_probs=77.4

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHH
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQ  133 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  133 (150)
                      .+++|.|++|++.|.....|..|+..|.  ++|.|.+|++.|.....|..|+. |++++  +|.|+.|++.|.....|..
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~--~~~C~~C~~~f~~~~~L~~   87 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYK--KLTCLECMRTFKSSFSIWR   87 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTG--GGEEGGGTEECSSHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCC--CccCccccchhCCHHHHHH
Confidence            3478999999999999999999999884  68999999999999999999984 77776  8999999999999999999


Q ss_pred             HHH-HhcCCCCCCCC
Q psy12196        134 HIV-SVHLGKEGTAP  147 (150)
Q Consensus       134 H~~-~~~~~~~~~~~  147 (150)
                      |++ .|.++++|.+.
T Consensus        88 H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           88 HQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHTSCCCCCCCCC
T ss_pred             HHHHHcCCCCCCCCC
Confidence            997 77788888664

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.8e-21  Score=109.47  Aligned_cols=84  Identities=19%  Similarity=0.455  Sum_probs=79.1

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHH
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQ  133 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  133 (150)
                      .+++|.| .|++.|.....|..|+..|.++++|.|.+|++.|.....|..|++.|++++  +|.|+.|++.|.....|..
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK--PYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCC--CEECSSSCCEESCHHHHHH
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCC--CeeCCCCcchhcCHHHHHH
Confidence            4588999 999999999999999999999999999999999999999999999988887  9999999999999999999


Q ss_pred             HHHHhcC
Q psy12196        134 HIVSVHL  140 (150)
Q Consensus       134 H~~~~~~  140 (150)
                      |+++++.
T Consensus        84 H~~~~~~   90 (110)
T 2csh_A           84 HVTSCTK   90 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHccc
Confidence            9999884

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=1e-22  Score=115.47  Aligned_cols=102  Identities=19%  Similarity=0.314  Sum_probs=85.2

Q ss_pred             HHHHHHhc-cCCcccccCCCCcccCChHHHHHHHHh--hcCCCccc-CCCChhhh--cchhHHhhHHhhhcCCCCCCcCC
Q psy12196         45 SLVTHISQ-THTLMFTCRRCPSTFLNSATLSKHVKM--EHNSKSYQ-CNECPESF--ERLNKLKRHKFQAHNDSVHQIQC  118 (150)
Q Consensus        45 ~l~~h~~~-~~~~~~~c~~c~~~f~~~~~l~~h~~~--~~~~~~~~-c~~c~~~~--~~~~~l~~h~~~~~~~~~~~~~C  118 (150)
                      .|..|+.. ..+++|.|++|++.|.....|..|++.  |.+.+++. |.+|++.|  .....|..|+++|++++  +|.|
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~--~~~C   83 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK--VLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCS--SCBC
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCc--ceEC
Confidence            34445422 224889999999999999999999998  77677654 99999998  88899999998888877  9999


Q ss_pred             cchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        119 PYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       119 ~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      +.|++.|.....|..|++.++.......|.
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~~~~~~~~~  113 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKHYQKVSGPS  113 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTTTTCSCCCC
T ss_pred             CCCCCccCCHHHHHHHHHHhCCcccCCCCC
Confidence            999999999999999999999887776654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.84  E-value=8.5e-22  Score=98.25  Aligned_cols=58  Identities=19%  Similarity=0.419  Sum_probs=40.4

Q ss_pred             CCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196         83 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus        83 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      |+||.|.+||+.|...+.|..|+++|++++  ||.|++|+++|...+.|..|+++|++++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ek--p~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYR--PRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCC--CEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCc--CeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            567777777777777777777777776666  7777777777777777777777766553

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=4.3e-20  Score=103.13  Aligned_cols=89  Identities=22%  Similarity=0.426  Sum_probs=76.5

Q ss_pred             CCcceecccccccccChHHHHHHHhccC-CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHH
Q psy12196         27 TSLSIQCNMCSLVLDSKESLVTHISQTH-TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHK  105 (150)
Q Consensus        27 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~-~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~  105 (150)
                      ..++|.|..|++.|.....|..|+.... .++|.|++|++.|.....|..|+..|+++++|.|.+|++.|.....|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            4566889999999999999999974433 378999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCcC
Q psy12196        106 FQAHNDSVHQIQ  117 (150)
Q Consensus       106 ~~~~~~~~~~~~  117 (150)
                      ++|++++  +|.
T Consensus        94 ~~H~~~~--~~~  103 (106)
T 2ee8_A           94 TLHMQTS--SPT  103 (106)
T ss_dssp             HHTTSCC--CCC
T ss_pred             HHhCCCC--CCc
Confidence            9888877  654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.82  E-value=3.3e-20  Score=102.49  Aligned_cols=83  Identities=25%  Similarity=0.532  Sum_probs=77.7

Q ss_pred             cccccCC--CCcccCChHHHHHHHHhhcCCCcccCC--CChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHH
Q psy12196         56 LMFTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCN--ECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNL  131 (150)
Q Consensus        56 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l  131 (150)
                      ++|.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|++++  +|.|+.|++.|.....|
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK--PFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCC--SCBCSSSCCBCSSHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCC--CeECCCCcCccCCHHHH
Confidence            6789986  999999999999999999999999996  69999999999999999999887  99999999999999999


Q ss_pred             HHHHHHhcC
Q psy12196        132 IQHIVSVHL  140 (150)
Q Consensus       132 ~~H~~~~~~  140 (150)
                      ..|+++|++
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999999864

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.82  E-value=2.3e-21  Score=104.83  Aligned_cols=82  Identities=24%  Similarity=0.423  Sum_probs=77.2

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHH
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHI  135 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  135 (150)
                      +||.|++|++.|.....|..|+..|.++++|.|.+|++.|.....|..|+..+++ .  +|.|+.|++.|.....|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~--~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-L--PILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-H--HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-C--cchHHHHHHHHHHHhhhHHHH
Confidence            6899999999999999999999999999999999999999999999999998874 3  899999999999999999999


Q ss_pred             HHhcC
Q psy12196        136 VSVHL  140 (150)
Q Consensus       136 ~~~~~  140 (150)
                      +.+|+
T Consensus        79 ~~~h~   83 (88)
T 1llm_C           79 ARLKK   83 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98873

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=2.6e-20  Score=104.20  Aligned_cols=89  Identities=19%  Similarity=0.334  Sum_probs=79.8

Q ss_pred             CCcceecccccccccChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHh
Q psy12196         27 TSLSIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKF  106 (150)
Q Consensus        27 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~  106 (150)
                      +.++|.|..|++.|.....|..|+ ..|.++|.|++|++.|.....|..|+. |+++++|.|.+|++.|.....|..|++
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~   90 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHE-RLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQV   90 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHH-HHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHH-HHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHH
Confidence            567799999999999999999998 556789999999999999999999996 999999999999999999999999997


Q ss_pred             -hhcCCCCCCcCCc
Q psy12196        107 -QAHNDSVHQIQCP  119 (150)
Q Consensus       107 -~~~~~~~~~~~C~  119 (150)
                       .|.+++  +|.+.
T Consensus        91 ~~H~~~~--~~~~~  102 (107)
T 1wjp_A           91 EVHNQNN--MAPTS  102 (107)
T ss_dssp             HTSCCCC--CCCCC
T ss_pred             HHcCCCC--CCCCC
Confidence             677766  77664

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.81  E-value=1.6e-20  Score=101.65  Aligned_cols=81  Identities=28%  Similarity=0.564  Sum_probs=68.8

Q ss_pred             cccccCC--CCcccCChHHHHHHHHhhcCCCcccCC--CChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHH
Q psy12196         56 LMFTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCN--ECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNL  131 (150)
Q Consensus        56 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l  131 (150)
                      .+|.|+.  |++.|.....|..|+..|.++++|.|.  +|++.|.....|..|+..|++++  +|.|+.|++.|...+.|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHR--PFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCC--CEECSSSSCEESSHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCC--CccCCCCCcccCCHHHH
Confidence            5677888  888888888888888888888888886  58888888888888888888877  88888888888888888


Q ss_pred             HHHHHHh
Q psy12196        132 IQHIVSV  138 (150)
Q Consensus       132 ~~H~~~~  138 (150)
                      ..|+++|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            8888776

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=8.1e-20  Score=100.22  Aligned_cols=86  Identities=23%  Similarity=0.531  Sum_probs=78.0

Q ss_pred             CCcceecccccccccChHHHHHHHhccC-CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHH
Q psy12196         27 TSLSIQCNMCSLVLDSKESLVTHISQTH-TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHK  105 (150)
Q Consensus        27 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~-~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~  105 (150)
                      +.++|.|..|++.|.....|..|+.... .++|.|+.|++.|.....|..|+..|+++++|.|.+|++.|.....|..|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            5677999999999999999999984333 388999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCC
Q psy12196        106 FQAHNDS  112 (150)
Q Consensus       106 ~~~~~~~  112 (150)
                      ++|+++.
T Consensus        85 ~~h~~~~   91 (96)
T 2dmd_A           85 RSHTGDS   91 (96)
T ss_dssp             TTCCSCC
T ss_pred             HHhcCCC
Confidence            9988876

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.80  E-value=4.7e-20  Score=91.90  Aligned_cols=58  Identities=24%  Similarity=0.491  Sum_probs=54.6

Q ss_pred             CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      ++||.|.+|++.|.....|..|+++|+|++||.|.+||+.|...+.|..|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            5899999999999999999999999999999999999999999999999999988763

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=7.5e-20  Score=97.50  Aligned_cols=79  Identities=22%  Similarity=0.515  Sum_probs=54.7

Q ss_pred             eecccccccccChHHHHHHHhcc-CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhc
Q psy12196         31 IQCNMCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAH  109 (150)
Q Consensus        31 ~~c~~c~~~f~~~~~l~~h~~~~-~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~  109 (150)
                      |.|+.|++.|.....|..|+... ..++|.|+.|++.|.....|..|+..|+++++|.|.+|++.|...+.|..|+++|+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence            55666666666666666665322 23567777777777777777777777777777777777777777777777777665

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=9.3e-20  Score=98.81  Aligned_cols=85  Identities=26%  Similarity=0.498  Sum_probs=69.7

Q ss_pred             Ccceecc--cccccccChHHHHHHHhcc-CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhH
Q psy12196         28 SLSIQCN--MCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRH  104 (150)
Q Consensus        28 ~~~~~c~--~c~~~f~~~~~l~~h~~~~-~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h  104 (150)
                      +++|.|+  .|++.|.....|..|+... ..++|.|+.|++.|.....|..|+..|+++++|.|.+|++.|...+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            3568887  5888888888888887432 347889999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCC
Q psy12196        105 KFQAHNDS  112 (150)
Q Consensus       105 ~~~~~~~~  112 (150)
                      +++|++++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            98888764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.79  E-value=8.1e-20  Score=97.99  Aligned_cols=78  Identities=23%  Similarity=0.469  Sum_probs=73.1

Q ss_pred             cccc--CCCCcccCChHHHHHHHHhhcCCCcccCCC--ChhhhcchhHHhhHHhhhcCCCCCCcCCcc---hhhhccCch
Q psy12196         57 MFTC--RRCPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCPY---CITDFSEDK  129 (150)
Q Consensus        57 ~~~c--~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~---C~~~f~~~~  129 (150)
                      ||.|  +.|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++|++     |.|+.   |++.|...+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHH
Confidence            5789  889999999999999999999999999988  99999999999999998877     78999   999999999


Q ss_pred             HHHHHHHHhc
Q psy12196        130 NLIQHIVSVH  139 (150)
Q Consensus       130 ~l~~H~~~~~  139 (150)
                      .|..|+++||
T Consensus        76 ~l~~H~~~hh   85 (85)
T 2j7j_A           76 LYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhcC
Confidence            9999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.78  E-value=2.7e-20  Score=102.53  Aligned_cols=79  Identities=19%  Similarity=0.284  Sum_probs=70.2

Q ss_pred             cCChHHHHHHHHhhcCCCcccCCCChhhhc-chhHHhhHHhhhcC-CCCCCcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196         67 FLNSATLSKHVKMEHNSKSYQCNECPESFE-RLNKLKRHKFQAHN-DSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus        67 f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~-~~~~l~~h~~~~~~-~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      +.....+..|++.|.++++|.|.+|++.|. ....|..|+++|++ ++  +|.|+.|++.|.....|.+|+++|++++|.
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~--~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQD--ALKCQHCRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHH--HHSCSSSCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCC--CEECCCCCCccCCHHHHHHHHHHHcCCCCC
Confidence            444455678999999999999999999999 99999999999887 76  999999999999999999999999999986


Q ss_pred             CCC
Q psy12196        145 TAP  147 (150)
Q Consensus       145 ~~~  147 (150)
                      ...
T Consensus        84 ~~~   86 (98)
T 2gqj_A           84 DAE   86 (98)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.4e-18  Score=95.10  Aligned_cols=85  Identities=24%  Similarity=0.464  Sum_probs=73.5

Q ss_pred             CCcceecccccccccChHHHHHHHhccC-CcccccCCCCcccCChHHHHHHHHhhcCC--CcccCCCChhhhcchhHHhh
Q psy12196         27 TSLSIQCNMCSLVLDSKESLVTHISQTH-TLMFTCRRCPSTFLNSATLSKHVKMEHNS--KSYQCNECPESFERLNKLKR  103 (150)
Q Consensus        27 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~-~~~~~c~~c~~~f~~~~~l~~h~~~~~~~--~~~~c~~c~~~~~~~~~l~~  103 (150)
                      +..+|.|..|++.|.....|..|+.... +++|.|+.|++.|.....|..|+..|+++  ++|.|.+|++.|.....|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            5677999999999999999999974433 38899999999999999999999999987  89999999999999999999


Q ss_pred             HHh-hhcCC
Q psy12196        104 HKF-QAHND  111 (150)
Q Consensus       104 h~~-~~~~~  111 (150)
                      |++ .|.++
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            986 45543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.76  E-value=1.2e-20  Score=106.84  Aligned_cols=97  Identities=22%  Similarity=0.292  Sum_probs=81.8

Q ss_pred             HHHHHHHHHHhhCCCcceecccccccccChHHHHHHHhcc-C--Cc-ccccCCCCccc--CChHHHHHHHHhhcCCCccc
Q psy12196         14 ATLYKHLYLEHKATSLSIQCNMCSLVLDSKESLVTHISQT-H--TL-MFTCRRCPSTF--LNSATLSKHVKMEHNSKSYQ   87 (150)
Q Consensus        14 ~~l~~h~~~~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~-~--~~-~~~c~~c~~~f--~~~~~l~~h~~~~~~~~~~~   87 (150)
                      ..|..|+++ |. +.++|.|..|++.|.....|..|+... +  .. .+.|+.|++.|  .....|..|+..|+++++|.
T Consensus         5 ~~l~~H~~~-H~-~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            5 SSGKLYGSI-FT-GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCC-CC-CCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             hhhhhheee-eC-CCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            345667665 33 567899999999999999999998531 2  23 34599999999  88899999999999999999


Q ss_pred             CCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         88 CNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        88 c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      |.+|++.|...+.|..|+++++...
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCcc
Confidence            9999999999999999999987765

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.4e-18  Score=95.10  Aligned_cols=77  Identities=12%  Similarity=0.204  Sum_probs=67.7

Q ss_pred             cccCChHHHHHHHHhhcCCCcccCCCChhhh-cchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHH-HHHhcCCC
Q psy12196         65 STFLNSATLSKHVKMEHNSKSYQCNECPESF-ERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQH-IVSVHLGK  142 (150)
Q Consensus        65 ~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~-~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~  142 (150)
                      ..|.....+..|+..+.++++|.|.+|++.| .....|..|+++| +++  +|.|.+|++.|.....|..| +.+|. ++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k--~~~C~~Cgk~F~~~~~L~~H~~~~H~-~~   89 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQE--MFTCHHCGKQLRSLAGMKYHVMANHN-SL   89 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCC--CCCCSSSCCCCSSHHHHHHHHHHHTC-CC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCC--CeECCCCCCeeCCHHHHHHHhHHhcC-CC
Confidence            4566777888999999999999999999999 9999999999998 766  99999999999999999999 77766 55


Q ss_pred             CCC
Q psy12196        143 EGT  145 (150)
Q Consensus       143 ~~~  145 (150)
                      ||.
T Consensus        90 p~~   92 (96)
T 2ctd_A           90 PSG   92 (96)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            553

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.75  E-value=1.3e-18  Score=90.87  Aligned_cols=65  Identities=28%  Similarity=0.479  Sum_probs=53.5

Q ss_pred             HhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196         78 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus        78 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      ..+.++++|.|.+|++.|.....|..|++.|++++  +|+|+.|++.|.....|.+|+++|++++||
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEK--PYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCC--SEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCC--CEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            34567788888888888888888888888887776  888888888888888888888888888876

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.3e-18  Score=89.94  Aligned_cols=66  Identities=24%  Similarity=0.438  Sum_probs=59.7

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      .+.++++|.|.+|++.|.....|..|+++|++++  +|.|+.|++.|.....|..|+++|++++|.+.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p~   68 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDR--PFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS   68 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSC--SEECSSSSCEESSHHHHHHHHHHHHSSSCCSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCC--CEeCCCCCCccCCHHHHHHHHHHHhCCCCCCC
Confidence            4678899999999999999999999999988877  89999999999999999999999999988754

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=5.9e-19  Score=92.93  Aligned_cols=65  Identities=22%  Similarity=0.476  Sum_probs=44.7

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +.++++|.|.+|++.|.....|..|+++|++++  +|.|+.|++.|.....|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEK--PYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSC--SEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCc--CeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            345666777777777777777777766666655  67777777777777777777777777777654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=2.3e-18  Score=96.64  Aligned_cols=83  Identities=23%  Similarity=0.427  Sum_probs=72.4

Q ss_pred             CCcceecccccccccChHHHHHHHhccC-CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHH
Q psy12196         27 TSLSIQCNMCSLVLDSKESLVTHISQTH-TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHK  105 (150)
Q Consensus        27 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~-~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~  105 (150)
                      +.++|.| .|++.|.....|..|+.... .++|.|+.|++.|.....|..|+..|+++++|.|.+|++.|.....|..|+
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   85 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV   85 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHH
Confidence            5677999 89999999999999974433 378999999999999999999999999999999999999999999999998


Q ss_pred             hhhcC
Q psy12196        106 FQAHN  110 (150)
Q Consensus       106 ~~~~~  110 (150)
                      +.++.
T Consensus        86 ~~~~~   90 (110)
T 2csh_A           86 TSCTK   90 (110)
T ss_dssp             HHHHH
T ss_pred             HHccc
Confidence            87653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.2e-19  Score=95.88  Aligned_cols=76  Identities=16%  Similarity=0.308  Sum_probs=62.2

Q ss_pred             HHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCC--CCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196         73 LSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS--VHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus        73 l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      +..|+++|.++++|.|.+|++.|.....|..|+..++.+.  +++|.|+.|++.|.....|..|+++|++++++.++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            4467788888888999999999988888888887766652  247889999999999999999999998888887754

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.1e-18  Score=90.55  Aligned_cols=71  Identities=25%  Similarity=0.424  Sum_probs=59.0

Q ss_pred             CCcccccCC--CCcccCChHHHHHHHH-hhcCCCcccCCC--ChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhcc
Q psy12196         54 HTLMFTCRR--CPSTFLNSATLSKHVK-MEHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFS  126 (150)
Q Consensus        54 ~~~~~~c~~--c~~~f~~~~~l~~h~~-~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~  126 (150)
                      ..++|.|..  |++.|.....|..|+. .|.++++|.|.+  |++.|.....|..|+++|++++  +|.|+.|++.|.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C~k~F~   79 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR--DYICEFSGPSSG   79 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSC--CCSCCSSSCCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCC--CeeCCCCCCCCC
Confidence            346777775  8888888888888888 688888888888  8888888888888888888877  888888888874

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.73  E-value=1.3e-17  Score=90.02  Aligned_cols=81  Identities=21%  Similarity=0.520  Sum_probs=72.4

Q ss_pred             Ccceeccc--ccccccChHHHHHHHhccC-CcccccC--CCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHh
Q psy12196         28 SLSIQCNM--CSLVLDSKESLVTHISQTH-TLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLK  102 (150)
Q Consensus        28 ~~~~~c~~--c~~~f~~~~~l~~h~~~~~-~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~  102 (150)
                      ...|.|..  |++.|.....|..|+.... .++|.|+  .|++.|.....|..|+..|+++++|.|.+|++.|...+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45688998  9999999999999984333 3889997  59999999999999999999999999999999999999999


Q ss_pred             hHHhhh
Q psy12196        103 RHKFQA  108 (150)
Q Consensus       103 ~h~~~~  108 (150)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            998876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.72  E-value=3.6e-19  Score=102.70  Aligned_cols=110  Identities=16%  Similarity=0.217  Sum_probs=80.6

Q ss_pred             CCcceecccccc--cccChHHHHHHHhccCCcccccCCCCcccC------ChHHHHHHHHhhcCCCcccCCCChhhhcch
Q psy12196         27 TSLSIQCNMCSL--VLDSKESLVTHISQTHTLMFTCRRCPSTFL------NSATLSKHVKMEHNSKSYQCNECPESFERL   98 (150)
Q Consensus        27 ~~~~~~c~~c~~--~f~~~~~l~~h~~~~~~~~~~c~~c~~~f~------~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~   98 (150)
                      +.++|.|...+.  .|.....+..+......+.+.|++|.+.|.      ....|..|+ .|+++++|.|.+||+.|...
T Consensus         9 ~~k~~~~~~k~~~~~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~   87 (129)
T 2wbt_A            9 GSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSS   87 (129)
T ss_dssp             TCCGGGGCSSCEEEECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSH
T ss_pred             cccccccccCCeeeeecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCH
Confidence            456676655443  333232222222122235666777665554      556666666 68999999999999999999


Q ss_pred             hHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196         99 NKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus        99 ~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      ..|..|+++|  ++  +|.|+.|++.|...+.|.+|+++||+.
T Consensus        88 ~~l~~H~~~H--~~--~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           88 VSLKQHIRYT--EH--TKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHHT--CC--CCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHHC--CC--CCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            9999999887  55  999999999999999999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.72  E-value=2.8e-17  Score=90.59  Aligned_cols=84  Identities=25%  Similarity=0.511  Sum_probs=73.2

Q ss_pred             CCcceeccc--ccccccChHHHHHHHhccC-CcccccC--CCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHH
Q psy12196         27 TSLSIQCNM--CSLVLDSKESLVTHISQTH-TLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKL  101 (150)
Q Consensus        27 ~~~~~~c~~--c~~~f~~~~~l~~h~~~~~-~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l  101 (150)
                      ....|.|..  |++.|.....|..|+.... .++|.|+  .|++.|.....|..|+..|+++++|.|.+|++.|.....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            345688986  9999999999999974433 4889996  5999999999999999999999999999999999999999


Q ss_pred             hhHHhhhcC
Q psy12196        102 KRHKFQAHN  110 (150)
Q Consensus       102 ~~h~~~~~~  110 (150)
                      ..|+++|.+
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999988753

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=6.1e-18  Score=87.87  Aligned_cols=64  Identities=27%  Similarity=0.487  Sum_probs=56.9

Q ss_pred             HhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196         78 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus        78 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      ++|.++++|.|.+|++.|.....|..|++.|++++  +|.|+.|++.|.....|.+|+++|+++.+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~--~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEK--PYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSC--CEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCC--CeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            46788999999999999999999999999888877  89999999999999999999999987653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.9e-18  Score=89.76  Aligned_cols=70  Identities=24%  Similarity=0.470  Sum_probs=59.8

Q ss_pred             HHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196         74 SKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus        74 ~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      ..|+++|+++++|.|.+|++.|.....|..|+...+.+..++|.|+.|++.|.....|..|++++|+...
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            4578889999999999999999999999999875444333499999999999999999999999886543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=4.3e-18  Score=93.68  Aligned_cols=65  Identities=18%  Similarity=0.275  Sum_probs=38.9

Q ss_pred             CCcccccCCCCcccCChHHHHHHHH-hh---cCCCcccCCCChhhhcchhHHhhH-HhhhcCCCCCCcCCcc
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVK-ME---HNSKSYQCNECPESFERLNKLKRH-KFQAHNDSVHQIQCPY  120 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~-~~---~~~~~~~c~~c~~~~~~~~~l~~h-~~~~~~~~~~~~~C~~  120 (150)
                      +++||.|+.|++.|.....|..|++ .|   .+++||.|.+||+.|...+.|..| +++|++++  ||.|.+
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgek--py~C~~   84 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEE--NFKLTM   84 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCC--CEEEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCC--CeeCCc
Confidence            4456666666666666666666665 35   345566666666666666666666 55555555  566554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=5.3e-17  Score=85.38  Aligned_cols=63  Identities=25%  Similarity=0.513  Sum_probs=58.3

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCC
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  118 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C  118 (150)
                      .+++|.|++|++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++|++++  +|+|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~--p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG--PSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCC--CCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCC--CCCC
Confidence            45889999999999999999999999999999999999999999999999999998887  8877

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.3e-17  Score=85.14  Aligned_cols=61  Identities=23%  Similarity=0.672  Sum_probs=53.3

Q ss_pred             HhhcCCCcccCCCChhhhcchhHHhhHHhhhc--CCCCCCcCCcchhhhccCchHHHHHHHHhcC
Q psy12196         78 KMEHNSKSYQCNECPESFERLNKLKRHKFQAH--NDSVHQIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus        78 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~--~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      .+|.++++|.|.+|++.|...+.|..|+..++  +++  +|.|+.|++.|...+.|..|++++|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~--~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVK--VYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCC--CEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCc--CeECCCCCCccCCHHHHHHHHHHHcC
Confidence            46788999999999999999999999988743  444  99999999999999999999999885

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.68  E-value=2.4e-17  Score=81.70  Aligned_cols=57  Identities=21%  Similarity=0.367  Sum_probs=39.7

Q ss_pred             CCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcC
Q psy12196         82 NSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus        82 ~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      |+++|.|.+|++.|.....|..|+++|++++  +|.|+.|++.|.....|..|+++||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEK--PYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCC--CEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCC--CcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            3567777777777777777777777777766  77777777777777777777777763

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=5.7e-17  Score=85.46  Aligned_cols=66  Identities=17%  Similarity=0.316  Sum_probs=53.9

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCC-CCCCcCCcchhhhccCchHHHHHHHHhc-CCCCCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHND-SVHQIQCPYCITDFSEDKNLIQHIVSVH-LGKEGT  145 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~~~-~~~~~~  145 (150)
                      |+++++|.|.+|++.|.....|..|+++|+++ ++++|.|+.|++.|.....|..|++.+| ++++..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            67889999999999999999999999888752 1238999999999999999999996655 444443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=7.6e-17  Score=85.82  Aligned_cols=57  Identities=26%  Similarity=0.495  Sum_probs=37.2

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHH
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVS  137 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  137 (150)
                      .+.+.++|.|.+|++.|.....|..|+++|++++  ||.|+.|+++|.....|.+|++.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQ--VFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSS--SEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCC--ccCCCCCCCEeCCHHHHHHhCcc
Confidence            3445556666666666666666666666666655  66666677777666667666644

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=3.9e-16  Score=81.39  Aligned_cols=60  Identities=27%  Similarity=0.573  Sum_probs=55.5

Q ss_pred             cCCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         53 THTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        53 ~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      ...++|.|+.|++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++|++++
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            345889999999999999999999999999999999999999999999999999998877

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1e-16  Score=88.22  Aligned_cols=67  Identities=16%  Similarity=0.110  Sum_probs=43.2

Q ss_pred             cCCCcccCCCChhhhcchhHHhhHHhh-hcC-CCCCCcCCcchhhhccCchHHHHH-HHHhcCCCCCCCC
Q psy12196         81 HNSKSYQCNECPESFERLNKLKRHKFQ-AHN-DSVHQIQCPYCITDFSEDKNLIQH-IVSVHLGKEGTAP  147 (150)
Q Consensus        81 ~~~~~~~c~~c~~~~~~~~~l~~h~~~-~~~-~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~~~  147 (150)
                      .|++||.|.+|++.|...+.|..|++. |.+ .++++|.|..|++.|...+.|..| +++|++++||.|.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            456667777777777777777777653 532 223367777777777777777777 5666677776653

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.64  E-value=1.7e-17  Score=89.50  Aligned_cols=80  Identities=20%  Similarity=0.355  Sum_probs=56.8

Q ss_pred             cceecccccccccChHHHHHHHhcc-CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhh
Q psy12196         29 LSIQCNMCSLVLDSKESLVTHISQT-HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQ  107 (150)
Q Consensus        29 ~~~~c~~c~~~f~~~~~l~~h~~~~-~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~  107 (150)
                      ++|.|+.|++.|.....|..|+... .+++|.|+.|++.|.....|..|+..|++ .++.|..|++.|.....|..|+..
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4567777777777777777776322 23677777777777777777777777764 667777788888877777777765


Q ss_pred             hc
Q psy12196        108 AH  109 (150)
Q Consensus       108 ~~  109 (150)
                      .+
T Consensus        81 ~h   82 (88)
T 1llm_C           81 LK   82 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.3e-16  Score=83.23  Aligned_cols=65  Identities=23%  Similarity=0.381  Sum_probs=60.4

Q ss_pred             cCCCcccCCC--ChhhhcchhHHhhHHh-hhcCCCCCCcCCcc--hhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196         81 HNSKSYQCNE--CPESFERLNKLKRHKF-QAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus        81 ~~~~~~~c~~--c~~~~~~~~~l~~h~~-~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +++++|.|..  |++.|.....|..|++ .|.+++  +|.|+.  |++.|.....|..|+++|++++||.|+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~--~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   72 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK--SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   72 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCC--CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCC--CeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC
Confidence            4678999987  9999999999999998 688877  999999  999999999999999999999999886

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.64  E-value=1.1e-16  Score=79.25  Aligned_cols=56  Identities=29%  Similarity=0.530  Sum_probs=33.1

Q ss_pred             cccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196         85 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ||.|.+|++.|...+.|..|+.+|++++  +|.|+.|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVR--PYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC--CEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCC--CccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            3555666666666666666655555554  5666666666666666666666665543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.63  E-value=4.7e-16  Score=83.11  Aligned_cols=72  Identities=19%  Similarity=0.424  Sum_probs=37.1

Q ss_pred             ccccccccChHHHHHHHhcc-CCcccccCC--CCcccCChHHHHHHHHhhcCCCcccCCC---ChhhhcchhHHhhHHhh
Q psy12196         34 NMCSLVLDSKESLVTHISQT-HTLMFTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCNE---CPESFERLNKLKRHKFQ  107 (150)
Q Consensus        34 ~~c~~~f~~~~~l~~h~~~~-~~~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~c~~---c~~~~~~~~~l~~h~~~  107 (150)
                      +.|++.|.....|..|+... .+++|.|+.  |++.|.....|..|++.|++   |.|.+   |++.|.....|..|+++
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHh
Confidence            44444444444444443211 124455554  55555555555555555555   55555   55555555555555544


Q ss_pred             h
Q psy12196        108 A  108 (150)
Q Consensus       108 ~  108 (150)
                      +
T Consensus        84 h   84 (85)
T 2j7j_A           84 C   84 (85)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.4e-16  Score=85.43  Aligned_cols=68  Identities=22%  Similarity=0.457  Sum_probs=42.6

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCC----CcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhc
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNS----KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDF  125 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~----~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f  125 (150)
                      ++|.|..|++.|.....|..|+..++++    ++|.|.+|++.|.....|..|+.+++++.  ++.|..|+.+|
T Consensus        14 k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~--~~~~~~~~~~~   85 (86)
T 1x6h_A           14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD--GVEGENSGPSS   85 (86)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCC--SCCCCCCCCCC
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCC--CcccCCCCCCC
Confidence            5666666666666666666666655543    56666666666666666666666666655  56666665543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=8.1e-16  Score=79.31  Aligned_cols=61  Identities=20%  Similarity=0.391  Sum_probs=53.6

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCC
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVH  114 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~  114 (150)
                      .+++|.|+.|++.|.....|..|+..|+++++|.|.+|++.|.....|..|+++++++++.
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            3478899999999999999999999999999999999999999999999999888887743

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.60  E-value=1.4e-15  Score=75.26  Aligned_cols=56  Identities=21%  Similarity=0.532  Sum_probs=51.8

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      ||.|+.|++.|.....|..|+..|+++++|.|.+|++.|...+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68899999999999999999999999999999999999999999999998887765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.60  E-value=1.3e-15  Score=75.35  Aligned_cols=55  Identities=22%  Similarity=0.413  Sum_probs=49.3

Q ss_pred             CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhc
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAH  109 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~  109 (150)
                      +++|.|++|++.|.....|..|+..|+++++|.|.+|++.|.....|..|++.++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999999999999999999998875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=8.4e-16  Score=76.85  Aligned_cols=49  Identities=33%  Similarity=0.661  Sum_probs=27.6

Q ss_pred             cccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHH
Q psy12196         85 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHI  135 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  135 (150)
                      ||.|.+|++.|...+.|..|++.|++++  +|.|+.|++.|.....|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEK--PYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC--SEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCC--CccCCCCCCccCCHHHHHHHH
Confidence            4555555555555555555555555444  555555555555555555555

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=3.1e-15  Score=81.59  Aligned_cols=62  Identities=19%  Similarity=0.290  Sum_probs=43.8

Q ss_pred             ccCCCChhhhcchhHHhhHHhh-hcCCCCC------CcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196         86 YQCNECPESFERLNKLKRHKFQ-AHNDSVH------QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus        86 ~~c~~c~~~~~~~~~l~~h~~~-~~~~~~~------~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +.|..|++.|.....|..|++. |.++++.      +|.|+.|++.|.....|..|+++|++++||.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4455566666655566666554 4444311      288999999999999999999999999998875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=3.5e-15  Score=81.48  Aligned_cols=71  Identities=15%  Similarity=0.276  Sum_probs=56.1

Q ss_pred             cccChHHHHHHHhc-cCCcccccCCCCccc-CChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhH-HhhhcC
Q psy12196         39 VLDSKESLVTHISQ-THTLMFTCRRCPSTF-LNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRH-KFQAHN  110 (150)
Q Consensus        39 ~f~~~~~l~~h~~~-~~~~~~~c~~c~~~f-~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h-~~~~~~  110 (150)
                      .|.....+..|... ...++|.|+.|++.| .....|..|++.| ++++|.|.+|++.|...+.|..| +.+|++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            44555556666422 234788999999999 8999999999999 88999999999999999999999 776654

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=3.2e-15  Score=79.52  Aligned_cols=57  Identities=21%  Similarity=0.508  Sum_probs=51.9

Q ss_pred             CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHh-hhcCC
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKF-QAHND  111 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~  111 (150)
                      .+++.|++|++.|.....|..|+++|++++||.|.+|++.|.....|..|++ .|.++
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3789999999999999999999999999999999999999999999999975 45554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.4e-15  Score=76.93  Aligned_cols=59  Identities=24%  Similarity=0.498  Sum_probs=52.4

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      .+++|.|++|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++.
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            34789999999999999999999999999999999999999999999999998887654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=2.1e-18  Score=89.85  Aligned_cols=68  Identities=21%  Similarity=0.306  Sum_probs=59.8

Q ss_pred             HHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196         72 TLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus        72 ~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|..|++.|.++++|.|.+|++.|...+.|..       ++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~--~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RK--TPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SS--SCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CC--CCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            45678888999999999999999998887765       33  8999999999999999999999999999999863

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=8.2e-16  Score=84.45  Aligned_cols=68  Identities=16%  Similarity=0.309  Sum_probs=50.2

Q ss_pred             HHHHHHhcc-CCcccccCCCCcccC-ChHHHHHHHHhhcC-CCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         45 SLVTHISQT-HTLMFTCRRCPSTFL-NSATLSKHVKMEHN-SKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        45 ~l~~h~~~~-~~~~~~c~~c~~~f~-~~~~l~~h~~~~~~-~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      .+..|+... .+++|.|++|++.|. ....|..|++.|++ +++|.|.+|++.|.....|..|++++++++
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            344454222 237788888888888 78888888888877 778888888888888888888887777776

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.55  E-value=2.1e-15  Score=86.81  Aligned_cols=81  Identities=17%  Similarity=0.355  Sum_probs=69.1

Q ss_pred             cceeccccccccc------ChHHHHHHHhccCCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHh
Q psy12196         29 LSIQCNMCSLVLD------SKESLVTHISQTHTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLK  102 (150)
Q Consensus        29 ~~~~c~~c~~~f~------~~~~l~~h~~~~~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~  102 (150)
                      ..+.|..|.+.|.      ....|..|+...+++||.|++|++.|.....|..|++.|  +++|.|.+|++.|...+.|.
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~  117 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSAL  117 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHH
Confidence            4467887776665      566677777444569999999999999999999999998  88999999999999999999


Q ss_pred             hHHhhhcCC
Q psy12196        103 RHKFQAHND  111 (150)
Q Consensus       103 ~h~~~~~~~  111 (150)
                      .|+++++++
T Consensus       118 ~H~~~h~~~  126 (129)
T 2wbt_A          118 DHVCKKHNI  126 (129)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHHCCc
Confidence            999998875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.2e-14  Score=72.51  Aligned_cols=56  Identities=29%  Similarity=0.589  Sum_probs=49.8

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHH-hhhcCC
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHK-FQAHND  111 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~-~~~~~~  111 (150)
                      +||.|+.|++.|.....|..|++.|+++++|.|.+|++.|...+.|..|+ ..|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47899999999999999999999999999999999999999999999996 455543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=4.4e-15  Score=75.61  Aligned_cols=59  Identities=17%  Similarity=0.423  Sum_probs=44.4

Q ss_pred             cCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc-chhhhccCchHHHHHHHHhcCCCC
Q psy12196         81 HNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP-YCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus        81 ~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      .++++|.|..|++.|. .+.|..|+++ .+++  +|.|+ .|++.|...+.|..|+++|.+..+
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~--p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRL--PVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSS--EEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCc--CccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3567788888888888 7788888776 5554  78888 888888888888888877765544

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=3.7e-15  Score=77.41  Aligned_cols=57  Identities=28%  Similarity=0.598  Sum_probs=35.2

Q ss_pred             hcCCCcccCC--CChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHh
Q psy12196         80 EHNSKSYQCN--ECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus        80 ~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      +.++++|.|.  .|++.|.....|..|++.|.+++  +|.|+.|++.|.....|.+|+++|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQK--PFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCC--CEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCC--CeECCCCCchhCCHHHHHHHHHhc
Confidence            4455666664  36666666666666666665555  666666666666666666666554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.50  E-value=4.6e-14  Score=76.91  Aligned_cols=62  Identities=23%  Similarity=0.255  Sum_probs=50.9

Q ss_pred             cccccCCCCcccCChHHHHHHHHh-hcCCCc--------ccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKM-EHNSKS--------YQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~-~~~~~~--------~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      ..+.|+.|++.|.....|..|++. |.++++        |.|.+|++.|.....|..|+++|++++  +|.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK--SGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCC--CCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCC--CCCCC
Confidence            345688888888888888888887 777776        888888888888888888888888877  88875

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.4e-14  Score=72.79  Aligned_cols=56  Identities=21%  Similarity=0.523  Sum_probs=45.0

Q ss_pred             CcccccCCCCcccCChHHHHHHHHh-h-cCCCcccCCCChhhhcchhHHhhHHhhhcC
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVKM-E-HNSKSYQCNECPESFERLNKLKRHKFQAHN  110 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~~-~-~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~  110 (150)
                      +++|.|+.|++.|.....|..|+.. | .++++|.|.+|++.|...+.|..|++.+++
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4778888888888888888888877 5 477888888888888888888888877664

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=1e-13  Score=72.83  Aligned_cols=57  Identities=21%  Similarity=0.444  Sum_probs=47.3

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcC---CCcccCCCChhhhcchhHHhhHHhhhcC
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHN---SKSYQCNECPESFERLNKLKRHKFQAHN  110 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~---~~~~~c~~c~~~~~~~~~l~~h~~~~~~  110 (150)
                      .+++|.|.+|++.|.....|..|++.|.+   +++|.|.+|++.|.....|..|++.++.
T Consensus         4 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            4 GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            45788898999999988889999888885   7889999999999999899999854443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=4.5e-14  Score=73.23  Aligned_cols=56  Identities=25%  Similarity=0.590  Sum_probs=50.7

Q ss_pred             CCcccccC--CCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhc
Q psy12196         54 HTLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAH  109 (150)
Q Consensus        54 ~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~  109 (150)
                      ..++|.|+  .|++.|.....|..|++.|.++++|.|.+|++.|...+.|..|+++|+
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34889997  599999999999999999999999999999999999999999987653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=4.1e-13  Score=70.32  Aligned_cols=57  Identities=21%  Similarity=0.459  Sum_probs=43.8

Q ss_pred             CcccccCCCCcccCChHHHHHHHH-hhcCC-CcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVK-MEHNS-KSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~-~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      +++|.|++|++.|.....|..|+. .|.++ ++|.|.+|++.|.....|..|++.++..
T Consensus        13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           13 EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            377888888888888888888876 56654 7888888888888888888888776543

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.38  E-value=6.3e-14  Score=68.42  Aligned_cols=51  Identities=18%  Similarity=0.421  Sum_probs=42.8

Q ss_pred             hhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCC
Q psy12196         93 ESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGT  145 (150)
Q Consensus        93 ~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  145 (150)
                      +.|.....|..|+++|++++  +|.|+.|++.|...+.|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~h~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQ--PATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSC--CEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCCCC--CccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            45667777888888888877  8899999999999999999999999888873

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=1.1e-13  Score=65.23  Aligned_cols=44  Identities=14%  Similarity=0.175  Sum_probs=36.2

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      +|+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEK--PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCC--SEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCC--CeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3566677766  8889999999999889999988888888888875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.7e-13  Score=68.39  Aligned_cols=57  Identities=18%  Similarity=0.268  Sum_probs=48.7

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCC-CChhhhcchhHHhhHHhhhcCCC
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCN-ECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~-~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      ..++|.|..|++.|. ...|..|+++ ++++||.|. +||+.|...+.|..|+++|....
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            347889999999999 8899999988 889999999 99999999999999988765543

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.5e-13  Score=64.80  Aligned_cols=43  Identities=19%  Similarity=0.199  Sum_probs=35.6

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQR--PYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSS--SEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCc--CcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            566676666  8889999999998888999988888888888874

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.2e-13  Score=65.17  Aligned_cols=33  Identities=18%  Similarity=0.252  Sum_probs=15.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A           12 PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            444444444444444444444444444444443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.37  E-value=1.2e-13  Score=63.77  Aligned_cols=41  Identities=15%  Similarity=0.250  Sum_probs=30.6

Q ss_pred             HhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        105 KFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       105 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus         2 ~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            2 SSGSSGEN--PYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CSSSSSCC--SEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCC--CccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            44555655  778888888888888888888888888887774

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.37  E-value=2.4e-13  Score=64.06  Aligned_cols=42  Identities=21%  Similarity=0.275  Sum_probs=28.8

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            3 SGSSGTGEK--PYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSC--SCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCccCCCC--ceECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            455555555  677777777777777777777777777777665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.37  E-value=1.9e-13  Score=64.43  Aligned_cols=43  Identities=16%  Similarity=0.206  Sum_probs=35.2

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|.+++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEK--PFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCC--SEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCC--CEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            556666666  8888888888888888888888888888888864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.8e-13  Score=64.45  Aligned_cols=44  Identities=11%  Similarity=0.146  Sum_probs=35.7

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      +|+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEK--PYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCC--SSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCC--CcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3556666666  8888888888888888888888888888888874

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.5e-13  Score=64.00  Aligned_cols=43  Identities=14%  Similarity=0.158  Sum_probs=35.5

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|.....|.+|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKK--PYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSC--SCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCC--CcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555666666  8889999999999899999998888888888874

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1e-13  Score=65.38  Aligned_cols=33  Identities=18%  Similarity=0.270  Sum_probs=15.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|.|+.|++.|.....|.+|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A           12 HFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444444444444444444444444444443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.8e-13  Score=63.82  Aligned_cols=43  Identities=14%  Similarity=0.198  Sum_probs=35.5

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|.+++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKK--LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSC--CCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCC--CEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            555666666  8889999999999899999998888888888864

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.5e-13  Score=64.72  Aligned_cols=44  Identities=18%  Similarity=0.265  Sum_probs=38.0

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en3_A            2 SSGSSGTGEK--PFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCC--SEECSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred             ccccccCCCC--CeeCcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3666777776  8999999999999999999999999999999875

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.8e-13  Score=64.48  Aligned_cols=44  Identities=16%  Similarity=0.282  Sum_probs=35.6

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~--~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEK--PYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCC--SEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCc--CeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3556666666  8888888888888888888888888888888864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.7e-13  Score=64.60  Aligned_cols=44  Identities=14%  Similarity=0.207  Sum_probs=35.6

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      +|+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEK--PYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCC--CEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCC--CEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            3566666666  8888888888888888888888888888888864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.9e-13  Score=64.36  Aligned_cols=44  Identities=14%  Similarity=0.195  Sum_probs=35.2

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEK--PYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCC--CEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCC--CeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            3556666666  8888888888888888888888888888888864

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.36  E-value=1.4e-13  Score=64.91  Aligned_cols=42  Identities=17%  Similarity=0.161  Sum_probs=26.6

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            3 SGSSGTGEK--PFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCC--SBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CCCCCCCCC--CcccCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444555554  666666666666666666666666666666664

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.3e-13  Score=65.01  Aligned_cols=42  Identities=19%  Similarity=0.226  Sum_probs=23.0

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            3 SGSSGTGER--PHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCC--SEECSSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CcCCcCCCC--CeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444  555555555555555555555555555555554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=1.2e-13  Score=64.53  Aligned_cols=39  Identities=18%  Similarity=0.319  Sum_probs=21.3

Q ss_pred             hhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        107 QAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       107 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         4 ~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            4 GSSGEK--PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCSSCC--CEECSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CcCCCc--CccCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444  555555555555555555555555555555553

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.36  E-value=1.4e-13  Score=64.92  Aligned_cols=44  Identities=18%  Similarity=0.328  Sum_probs=31.5

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCC--CSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            4556677777777777777777777777777776666  7777765

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.3e-13  Score=64.11  Aligned_cols=42  Identities=19%  Similarity=0.235  Sum_probs=27.2

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            3 SGSSGTGEK--PYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             SSCTTSSCC--SEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             cccCCCCCc--CeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555  666666666666666666666666666666665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.4e-13  Score=64.88  Aligned_cols=42  Identities=17%  Similarity=0.188  Sum_probs=24.7

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            3 SGSSGTGEK--LYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCC--CCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CcccCCCCC--CeECCCCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            444455544  566666666666666666666666666666554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.3e-13  Score=64.10  Aligned_cols=42  Identities=19%  Similarity=0.270  Sum_probs=29.5

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            3 SGSSGTGER--PYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSCCC--SEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCCCC--CcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            455555555  777777777777777777777777777777765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.3e-13  Score=65.01  Aligned_cols=41  Identities=17%  Similarity=0.212  Sum_probs=20.2

Q ss_pred             HhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        105 KFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       105 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         4 ~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            4 GSSGTGEK--PYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCC--SEECSSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             cCCcCCCC--CeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            33344433  455555555555555555555555555555443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.4e-13  Score=64.84  Aligned_cols=33  Identities=18%  Similarity=0.237  Sum_probs=16.6

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A           12 PYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             SSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555555555555555555555555443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2.4e-13  Score=64.04  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=35.5

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEK--PYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCC--SEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCc--CccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            556666766  8889999999998888999988888888888874

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.7e-13  Score=64.61  Aligned_cols=43  Identities=19%  Similarity=0.213  Sum_probs=33.2

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGK--PYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSC--SSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCC--CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            555666666  7888888888888888888888888888888764

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.8e-13  Score=64.46  Aligned_cols=44  Identities=18%  Similarity=0.253  Sum_probs=34.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+.+|++++  +|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK--PSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCC--CSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            5667788888888888888888888888888777776  7888765

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.8e-13  Score=64.53  Aligned_cols=43  Identities=14%  Similarity=0.229  Sum_probs=34.2

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEK--PYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCC--SCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCc--CeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            555666666  8888888888888888888888888888888864

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.6e-13  Score=64.66  Aligned_cols=32  Identities=19%  Similarity=0.192  Sum_probs=15.6

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|+.|++.|...+.|..|+++|++++||.|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2elz_A           12 PYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP   43 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCS
T ss_pred             CeeCcccCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            44444444444444444444444444444444

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.5e-13  Score=64.81  Aligned_cols=41  Identities=20%  Similarity=0.195  Sum_probs=20.7

Q ss_pred             HhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        105 KFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       105 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +++|.+++  +|.|+.|++.|.....|.+|+++|++++||.|+
T Consensus         4 ~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            4 GSSGTGEK--PFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCC--SBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CCCcCCCC--CeECCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            33344443  555555555555555555555555555555543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.2e-13  Score=65.11  Aligned_cols=43  Identities=16%  Similarity=0.239  Sum_probs=33.1

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGER--HYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCC--CEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCC--CeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555666666  7888888888888888888888888888888764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.36  E-value=1.4e-13  Score=64.87  Aligned_cols=42  Identities=17%  Similarity=0.129  Sum_probs=22.0

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            3 SGSSGMGEK--TWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCC--CCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CcCccCCCc--CeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            333444444  555555555555555555555555555555553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=2e-13  Score=64.36  Aligned_cols=44  Identities=18%  Similarity=0.237  Sum_probs=35.0

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEK--PYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSC--CCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCC--CeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3556666666  8888888888888888888888888888888864

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.3e-13  Score=64.99  Aligned_cols=40  Identities=25%  Similarity=0.414  Sum_probs=17.4

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      +|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK--PSGPSS   45 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCC--CCSCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCC--CCCCCC
Confidence            3444444444444444444444444444444333  444443

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.35  E-value=1.4e-13  Score=64.87  Aligned_cols=42  Identities=19%  Similarity=0.218  Sum_probs=23.4

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            3 SGSSGTGEK--RYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SCSSCTTSC--CEECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CccCCCCCc--CcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            344444444  555666666666555566665555555555554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.4e-13  Score=64.06  Aligned_cols=42  Identities=14%  Similarity=0.206  Sum_probs=27.7

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            3 SGSSGSGEK--PYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSC--SEECSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CcccCCCCC--CEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            444555555  667777777777777777777777777776665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.5e-13  Score=64.73  Aligned_cols=42  Identities=14%  Similarity=0.211  Sum_probs=23.6

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            3 SGSSGTGEK--PYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             SSSCSSCCC--SEECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCCCCCc--CcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444  555666666666666666666655555555554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.6e-13  Score=64.63  Aligned_cols=42  Identities=14%  Similarity=0.254  Sum_probs=25.9

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            3 SGSSGTGEK--PFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSC--SCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCC--CcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            444455544  666666666666666666666666666666654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.4e-13  Score=64.85  Aligned_cols=32  Identities=19%  Similarity=0.281  Sum_probs=15.3

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|+.|++.|...+.|..|+++|++++||.|
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq0_A           12 PYKCHECGKVFRRNSHLARHQLIHTGEKPSGP   43 (46)
T ss_dssp             CEECTTTCCEESSHHHHHHHHTTTCCCCCSCC
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            44444444444444444444444444444444

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.2e-13  Score=63.53  Aligned_cols=43  Identities=14%  Similarity=0.230  Sum_probs=34.6

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      .|+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEK--PYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCC--SEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCC--CeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            3556666666  888888888888888888888888888888874

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.35  E-value=1.4e-13  Score=64.88  Aligned_cols=32  Identities=28%  Similarity=0.313  Sum_probs=14.8

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|+.|++.|...+.|..|+++|++++||.|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2el4_A           12 PYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP   43 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHGGGSSSCCCSCC
T ss_pred             ceECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.35  E-value=1.8e-13  Score=64.52  Aligned_cols=45  Identities=22%  Similarity=0.355  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCC--CCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCC--CCCCCCC
Confidence            36778999999999999999999999999999999887  9999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.7e-13  Score=64.56  Aligned_cols=33  Identities=24%  Similarity=0.326  Sum_probs=16.6

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A           12 PYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             SCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            455555555555555555555555555555443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.7e-13  Score=64.54  Aligned_cols=42  Identities=12%  Similarity=0.158  Sum_probs=25.3

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            3 SGSSGTGEK--PYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CCCCCSSCC--SCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCCCCCCCC--CccCCccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            444455544  666666666666666666666666666666654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.4e-13  Score=63.51  Aligned_cols=45  Identities=18%  Similarity=0.307  Sum_probs=41.3

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+.+|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK--PSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCC--SSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            36678999999999999999999999999999998887  9999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.8e-13  Score=63.80  Aligned_cols=45  Identities=22%  Similarity=0.299  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSS--CCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCC--CCCCCCC
Confidence            36778999999999999999999999999999998887  9999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.2e-13  Score=65.08  Aligned_cols=44  Identities=14%  Similarity=0.240  Sum_probs=32.2

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSS--CSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCC--CCCCCCC
Confidence            4556777777777777777777777777777777666  7777765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2e-13  Score=64.33  Aligned_cols=32  Identities=22%  Similarity=0.338  Sum_probs=15.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|+.|++.|...+.|.+|+++|++++||.|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eme_A           12 PYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHGGGCCCSCCSS
T ss_pred             CeECCCCChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            44444444444444444444444444444444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.6e-13  Score=64.62  Aligned_cols=42  Identities=17%  Similarity=0.178  Sum_probs=22.2

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            3 SGSSGTGEK--PHECRECGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCSCCCCC--SCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CccccCCCC--CeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            333444444  555555555555555555555555555555554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2e-13  Score=64.29  Aligned_cols=43  Identities=16%  Similarity=0.222  Sum_probs=33.7

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGEN--PFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCC--SCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCC--CEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555666666  8888888888888888888888888888888764

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.1e-13  Score=64.27  Aligned_cols=43  Identities=16%  Similarity=0.308  Sum_probs=21.1

Q ss_pred             HHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         77 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        77 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      +++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2en1_A            4 GSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK--PSGPSSG   46 (46)
T ss_dssp             TTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCC--CSCCCCC
T ss_pred             ccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            344445555555555555555555555554444444  4445443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.4e-13  Score=64.83  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=32.6

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSS--CSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCC--CCCCCCC
Confidence            4556777777777777777777777777777777666  7777765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.4e-13  Score=64.90  Aligned_cols=42  Identities=19%  Similarity=0.133  Sum_probs=25.6

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            3 SGSSGTGVK--PYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCC--SEECSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             cccccCCCc--CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            444455544  666666666666666666666666666666654

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=1.7e-13  Score=64.58  Aligned_cols=40  Identities=20%  Similarity=0.352  Sum_probs=17.8

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      +|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK--PSGPSS   45 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCC--CSSTTC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCC--CCCCCC
Confidence            3444444444444444444444444444444433  444443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.9e-13  Score=64.43  Aligned_cols=43  Identities=14%  Similarity=0.189  Sum_probs=33.0

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGER--HYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCC--CEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCC--CCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            555666666  7888888888888888888888888888887764

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.7e-13  Score=63.89  Aligned_cols=42  Identities=19%  Similarity=0.246  Sum_probs=28.0

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            3 SGSSGTGEN--PYECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSC--CEECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCc--CcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            444555555  677777777777777777777777777777665

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.35  E-value=4.2e-13  Score=65.42  Aligned_cols=46  Identities=22%  Similarity=0.434  Sum_probs=27.4

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHh-hhcCCCCCCcCCcchhhhccC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKF-QAHNDSVHQIQCPYCITDFSE  127 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~~~C~~C~~~f~~  127 (150)
                      +.++++|.|.+|++.|.....|..|++ +|.+++  +|.|++|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k--~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSER--PHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCC--CCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCC--CccCCCCCCCCCC
Confidence            445566666666666666666666654 455554  6666666666653

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.5e-13  Score=64.81  Aligned_cols=44  Identities=18%  Similarity=0.318  Sum_probs=32.4

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSC--CSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCC--CCCCCCC
Confidence            4566777777777777777777777777777777766  7777765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.3e-13  Score=64.98  Aligned_cols=42  Identities=17%  Similarity=0.311  Sum_probs=26.2

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            3 SGSSGSGER--PYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCSCCC--CEECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCC--CEEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            444555554  666666666666666666666666666666654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.2e-13  Score=64.19  Aligned_cols=43  Identities=14%  Similarity=0.199  Sum_probs=34.2

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEK--PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCC--TTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCc--CeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            555666666  8888888888888888888888888888888864

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.6e-13  Score=64.64  Aligned_cols=41  Identities=17%  Similarity=0.221  Sum_probs=20.7

Q ss_pred             HhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        105 KFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       105 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         4 ~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            4 GSSGTGEK--PYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCSSCC--TTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CcCCCCCc--CcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            33444443  555555555555555555555555555555543

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.7e-13  Score=63.35  Aligned_cols=45  Identities=18%  Similarity=0.317  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER--HSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCS--SCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCC--CCCCCCC
Confidence            36778999999999999999999999999999999887  9999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.4e-13  Score=64.04  Aligned_cols=45  Identities=20%  Similarity=0.324  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK--SSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTT--SSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCC--CCCCCCC
Confidence            36778999999999999999999999999999999887  9999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.35  E-value=1.8e-13  Score=64.48  Aligned_cols=42  Identities=21%  Similarity=0.336  Sum_probs=19.2

Q ss_pred             HhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         78 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        78 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      ++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK--PSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCC--CCSTTCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhCCCC--CCCCCCC
Confidence            34444444444444444444444444444444443  4444443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.4e-13  Score=61.85  Aligned_cols=41  Identities=17%  Similarity=0.336  Sum_probs=31.9

Q ss_pred             HhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        105 KFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       105 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +++|.+++  +|.|+.|++.|...+.|.+|+++|++++||.|.
T Consensus         2 ~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            2 SSGSSGEK--PYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSSSCSCC--SCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CcCcCCCC--CeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44566666  888888888888888888888888888888763

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.8e-13  Score=64.49  Aligned_cols=42  Identities=12%  Similarity=0.155  Sum_probs=24.6

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            3 SGSSGSGEK--PYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCCCSCCCC--SEECSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CccccCCCc--CeECCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            344444444  566666666666666666666666666666554

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.1e-13  Score=63.64  Aligned_cols=44  Identities=14%  Similarity=0.240  Sum_probs=37.1

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|+++|.+++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGER--PFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCC--SCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCC--CeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3566677776  8999999999999999999999999999998874

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.1e-13  Score=63.60  Aligned_cols=43  Identities=14%  Similarity=0.113  Sum_probs=34.1

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      .|+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMK--PYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSS--SSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCc--CeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3555666666  888888888888888888888888888888874

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.34  E-value=5.5e-13  Score=62.79  Aligned_cols=44  Identities=18%  Similarity=0.278  Sum_probs=41.1

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCS--SCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            6778999999999999999999999999999999887  9999987

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.3e-13  Score=64.12  Aligned_cols=44  Identities=16%  Similarity=0.237  Sum_probs=33.4

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      +|+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEK--PFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSS--SBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCc--CCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3555666665  7888888888888888888888888888888764

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.3e-13  Score=64.11  Aligned_cols=43  Identities=16%  Similarity=0.223  Sum_probs=33.6

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEK--CYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCC--CCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCC--CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            555666666  7888888888888888888888888888888764

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1.5e-13  Score=64.77  Aligned_cols=32  Identities=25%  Similarity=0.229  Sum_probs=15.4

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|+.|++.|...+.|.+|+++|++++||.|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em5_A           12 SHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTSCSCCSSC
T ss_pred             CeECCcCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444444

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3e-13  Score=63.69  Aligned_cols=45  Identities=20%  Similarity=0.323  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCS--CCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            36778999999999999999999999999999999888  9999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.5e-13  Score=63.99  Aligned_cols=45  Identities=18%  Similarity=0.290  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCC--SCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            36778999999999999999999999999999998887  9999987

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.3e-13  Score=64.09  Aligned_cols=43  Identities=19%  Similarity=0.305  Sum_probs=34.0

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEK--PFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCC--SEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCC--CcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555666666  8888888888888888888888888888888764

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.8e-13  Score=64.51  Aligned_cols=42  Identities=17%  Similarity=0.252  Sum_probs=27.4

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            3 SGSSGTGEK--PYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSCCC--SEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCC--CeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555  666777777777666677776666666666665

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.34  E-value=3e-13  Score=69.92  Aligned_cols=51  Identities=27%  Similarity=0.647  Sum_probs=26.6

Q ss_pred             cccccCC--CCcccCChHHHHHHHHhhcCCCcccCCC--ChhhhcchhHHhhHHh
Q psy12196         56 LMFTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKF  106 (150)
Q Consensus        56 ~~~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~  106 (150)
                      ++|.|..  |++.|.....|..|++.|+++++|.|.+  |++.|.....|..|++
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            4455544  5555555555555555555555555532  5555555555555543

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.3e-13  Score=64.11  Aligned_cols=45  Identities=22%  Similarity=0.341  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCC--CCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCC--CCCCCCC
Confidence            36678999999999999999999999999999999887  9999987

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3e-13  Score=63.10  Aligned_cols=43  Identities=14%  Similarity=0.241  Sum_probs=34.2

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|+++|++++  +|.|+.|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGEN--PFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCC--SEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCC--CeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3556666666  888888888888888888888888888888774

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.8e-13  Score=64.44  Aligned_cols=42  Identities=17%  Similarity=0.207  Sum_probs=25.1

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            3 SGSSGTGEK--PCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCCCCC--SEECSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             CcccCCCCC--CeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455544  666666666666666666666666666666654

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.5e-13  Score=64.78  Aligned_cols=43  Identities=16%  Similarity=0.300  Sum_probs=21.0

Q ss_pred             HHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         77 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        77 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      +++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|+.|
T Consensus         4 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2ytg_A            4 GSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCC--SSCSCCC
T ss_pred             CCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            334444555555555555555555555554444444  4455443

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=4.1e-13  Score=62.62  Aligned_cols=44  Identities=14%  Similarity=0.200  Sum_probs=40.5

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |++.|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEK--PSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSC--SCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            4567899999999999999999999999999999887  9999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2e-13  Score=64.32  Aligned_cols=42  Identities=12%  Similarity=0.174  Sum_probs=26.0

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+
T Consensus         3 h~~~h~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEK--PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SCCCCSSCC--SSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCC--CcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            344455544  666666666666666666666666666666664

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.3e-13  Score=63.56  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCC--TTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            36778999999999999999999999999999999888  9999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.7e-13  Score=63.38  Aligned_cols=45  Identities=20%  Similarity=0.319  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR--PSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCC--SSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCC--CCCCCCC
Confidence            36778999999999999999999999999999999888  9999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.4e-13  Score=64.89  Aligned_cols=42  Identities=17%  Similarity=0.270  Sum_probs=26.1

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            3 SGSSGTGEK--PYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCS--SEECSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             cCcCCCCCC--CeECCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            444455544  666666666666666666666666666666664

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2.1e-13  Score=64.22  Aligned_cols=33  Identities=18%  Similarity=0.238  Sum_probs=17.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A           12 PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            555555555555555555555555555555543

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.33  E-value=3e-13  Score=63.68  Aligned_cols=45  Identities=16%  Similarity=0.262  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSS--CSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCC--CcCCCCC
Confidence            36778999999999999999999999999999998887  9999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2.3e-13  Score=64.08  Aligned_cols=42  Identities=21%  Similarity=0.192  Sum_probs=23.3

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|.+++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            3 SGSSGSREK--SHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CSCCSSCCC--CEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             cccccCCCC--CEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444444  555666666666656666666555555555554

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.1e-13  Score=63.63  Aligned_cols=45  Identities=18%  Similarity=0.192  Sum_probs=41.3

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN--PSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSC--CSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            36778999999999999999999999999999998887  9999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2e-13  Score=64.28  Aligned_cols=32  Identities=19%  Similarity=0.085  Sum_probs=15.9

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|+.|++.|...+.|..|+++|++++||.|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en8_A           12 SHTCDECGKNFCYISALRIHQRVHMGEKCSGP   43 (46)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTCCSCSSCC
T ss_pred             CeECCCcCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            44455555555555555555544444444444

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.33  E-value=2.7e-13  Score=63.87  Aligned_cols=32  Identities=22%  Similarity=0.317  Sum_probs=14.8

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|+.|++.|.....|..|+++|++++||.|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2el6_A           12 PYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP   43 (46)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCCSSCCSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            44444444444444444444444444444444

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.9e-13  Score=62.96  Aligned_cols=43  Identities=14%  Similarity=0.245  Sum_probs=31.4

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEK--PFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCC--SEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCC--CEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            455566655  7777777777777777777777777777777763

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.9e-13  Score=64.43  Aligned_cols=44  Identities=18%  Similarity=0.306  Sum_probs=41.0

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSS--CSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            6778999999999999999999999999999998887  9999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.8e-13  Score=63.83  Aligned_cols=45  Identities=22%  Similarity=0.341  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK--PSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCC--CSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCC--CCCCCCC
Confidence            36678999999999999999999999999999999988  9999987

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.7e-13  Score=63.88  Aligned_cols=43  Identities=14%  Similarity=0.244  Sum_probs=32.4

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|.+++  +|.|+.|++.|.....|.+|+++|++++||.|+.
T Consensus         3 h~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEK--PYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCC--SCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCc--ccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            445566665  7888888888888888888888888888887764

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.7e-13  Score=64.59  Aligned_cols=40  Identities=15%  Similarity=0.312  Sum_probs=17.7

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      +|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~   45 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER--PSGPSS   45 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCC--SSCCSC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCC--CCCCCC
Confidence            3444444444444444444444444444444433  444443

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-13  Score=64.24  Aligned_cols=42  Identities=17%  Similarity=0.178  Sum_probs=22.7

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 h~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            3 SGSSGSGEK--PYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSSC--CEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CCCccCCCc--CeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            333444444  555555555555555555555555555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.3e-13  Score=64.12  Aligned_cols=43  Identities=19%  Similarity=0.238  Sum_probs=32.9

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEK--PYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCC--CEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCC--CeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            555666665  7888888888888888888888888888887764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-13  Score=64.25  Aligned_cols=43  Identities=14%  Similarity=0.155  Sum_probs=31.4

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEK--PYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCC--SEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCc--CEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            455566655  7777777777777777777777777777777764

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.7e-13  Score=63.84  Aligned_cols=45  Identities=16%  Similarity=0.238  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK--PSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCC--CSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCC--CCCCCCC
Confidence            36778999999999999999999999999999999888  9999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=7.1e-13  Score=62.40  Aligned_cols=44  Identities=16%  Similarity=0.228  Sum_probs=41.0

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR--PSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCC--CCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            5678999999999999999999999999999999987  9999987

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.4e-15  Score=78.99  Aligned_cols=57  Identities=18%  Similarity=0.307  Sum_probs=45.5

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      ++|.|+.|++.|.....|..       +++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus        17 ~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~--~~~C~~C   73 (73)
T 2ctu_A           17 RSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKK--TSGPSSG   73 (73)
T ss_dssp             SEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCC--CSSCCCC
T ss_pred             CCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCC--CCCCCCC
Confidence            67777777777776666554       678888889998888888888888887776  8888876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.2e-13  Score=63.19  Aligned_cols=45  Identities=18%  Similarity=0.227  Sum_probs=41.3

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDK--HSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCC--CSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            36678999999999999999999999999999998887  9999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3e-13  Score=63.68  Aligned_cols=45  Identities=20%  Similarity=0.274  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK--PSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCC--SCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            36778999999999999999999999999999999887  9999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5.3e-13  Score=62.84  Aligned_cols=44  Identities=14%  Similarity=0.240  Sum_probs=41.0

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++  +|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCC--CCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            6778999999999999999999999999999998887  9999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=8.3e-13  Score=61.56  Aligned_cols=42  Identities=14%  Similarity=0.134  Sum_probs=34.8

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|.+++  +|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKT--TSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSC--CCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCc--CeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            445566666  889999999999999999999999999998874

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.1e-13  Score=63.66  Aligned_cols=44  Identities=23%  Similarity=0.403  Sum_probs=40.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCC--CSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            5678999999999999999999999999999998887  9999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.31  E-value=2.4e-13  Score=64.01  Aligned_cols=45  Identities=16%  Similarity=0.218  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK--PSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCC--CSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            36778999999999999999999999999999998887  9999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.5e-13  Score=63.09  Aligned_cols=45  Identities=24%  Similarity=0.398  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCS--CCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCC--CCCCCCC
Confidence            36778999999999999999999999999999998887  9999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.5e-13  Score=63.95  Aligned_cols=43  Identities=16%  Similarity=0.202  Sum_probs=33.3

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEK--PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCC--SSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cccCCCCCC--CeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            555666666  7888888888888888888888888888888764

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-13  Score=63.70  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=34.2

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSC--CCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            5567778888888888888888888888887777766  7887764

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.8e-13  Score=63.18  Aligned_cols=42  Identities=14%  Similarity=0.197  Sum_probs=31.7

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGEN--PYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCC--SCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCc--CeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555666666  778888888888888888888888788887764

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-13  Score=62.91  Aligned_cols=41  Identities=20%  Similarity=0.274  Sum_probs=29.1

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEK--PYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCC--SBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCC--CeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            445555555  77777777777777777777777777777765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.7e-13  Score=63.02  Aligned_cols=44  Identities=16%  Similarity=0.269  Sum_probs=41.0

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK--TSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCC--CCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCC--CCCCCCC
Confidence            5678999999999999999999999999999999887  9999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.8e-13  Score=62.97  Aligned_cols=45  Identities=18%  Similarity=0.244  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCS--CCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCC--CCCCCCC
Confidence            36778999999999999999999999999999998887  9999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=5e-13  Score=62.93  Aligned_cols=44  Identities=20%  Similarity=0.323  Sum_probs=41.1

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK--PSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCC--CSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCC--CCCCCCC
Confidence            5678999999999999999999999999999999887  9999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-13  Score=63.69  Aligned_cols=41  Identities=12%  Similarity=0.097  Sum_probs=23.5

Q ss_pred             HhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        105 KFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       105 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +++|.+++  +|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         4 ~~~h~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            4 GSSGSGEK--PYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCSCC--SEECSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCC--CeECcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            33444444  566666666666666666666666666666554

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4e-13  Score=63.53  Aligned_cols=33  Identities=21%  Similarity=0.293  Sum_probs=16.8

Q ss_pred             CcCCcchhhhccCchHHHHHHH-HhcCCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIV-SVHLGKEGTAP  147 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~~~  147 (150)
                      +|.|+.|++.|...+.|..|++ +|++++||.|+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A           12 PYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             SBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             CEECCccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            4555555555555555555555 45555555443

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=5.4e-13  Score=62.80  Aligned_cols=43  Identities=19%  Similarity=0.257  Sum_probs=32.7

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~h~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEK--PYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSS--SCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCC--CcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            444566655  7888888888888888888888888888888763

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.4e-13  Score=62.56  Aligned_cols=44  Identities=18%  Similarity=0.229  Sum_probs=40.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK--PSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSC--SSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCC--CCCCCCC
Confidence            5678999999999999999999999999999998887  9999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.5e-13  Score=63.46  Aligned_cols=45  Identities=20%  Similarity=0.260  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSC--CSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            36778999999999999999999999999999998887  9999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=8.4e-13  Score=62.13  Aligned_cols=44  Identities=23%  Similarity=0.222  Sum_probs=41.0

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQK--NSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCS--CCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            5678999999999999999999999999999999887  9999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.6e-13  Score=61.79  Aligned_cols=41  Identities=12%  Similarity=0.208  Sum_probs=33.0

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEK--PYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSC--SEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCC--CEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            445566666  88888888888888888888888888888875

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=4e-13  Score=63.24  Aligned_cols=45  Identities=18%  Similarity=0.219  Sum_probs=41.2

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .|+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK--CSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSC--SSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            36678999999999999999999999999999998887  9999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.5e-13  Score=63.45  Aligned_cols=44  Identities=14%  Similarity=0.157  Sum_probs=39.3

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSGSSGTGEK--PYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSS--SEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CcccCCCCCC--CeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            3666777777  9999999999999999999999999999999863

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.7e-13  Score=62.78  Aligned_cols=42  Identities=21%  Similarity=0.341  Sum_probs=30.6

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |+++|.+++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRK--RYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCS--SEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCC--CeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            555566655  777777777777777777777777777777764

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.29  E-value=7.1e-13  Score=61.12  Aligned_cols=41  Identities=15%  Similarity=0.226  Sum_probs=31.9

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      |+++|.+++  +|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~--~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGET--PYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSC--CEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCC--CeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            344566665  88888888888888888888888888888875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.29  E-value=2.5e-12  Score=66.39  Aligned_cols=57  Identities=19%  Similarity=0.469  Sum_probs=50.5

Q ss_pred             hcCCCcccCCC--ChhhhcchhHHhhHHhhhcCCCCCCcCCcc--hhhhccCchHHHHHHHHh
Q psy12196         80 EHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSV  138 (150)
Q Consensus        80 ~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  138 (150)
                      ....++|.|..  |++.|.....|..|+++|++++  +|.|+.  |++.|.....|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEK--PFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSC--SEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCC--CccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45678899988  9999999999999999998887  999965  999999999999998754

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.2e-13  Score=63.18  Aligned_cols=44  Identities=14%  Similarity=0.225  Sum_probs=39.7

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEK--PFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCC--SEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCC--CeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4677777877  9999999999999999999999999999999863

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=5.8e-13  Score=62.71  Aligned_cols=44  Identities=16%  Similarity=0.240  Sum_probs=32.2

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCC--SSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            4556777777777777777777777777777777766  7777654

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=4.9e-13  Score=61.70  Aligned_cols=41  Identities=15%  Similarity=0.189  Sum_probs=30.8

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEK--PYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSC--CBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCC--CEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            444556655  78888888888888888888888888888765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1e-12  Score=61.85  Aligned_cols=44  Identities=14%  Similarity=0.224  Sum_probs=40.8

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK--PSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSS--CCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCC--CCCCCCC
Confidence            5678999999999999999999999999999998887  9999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.29  E-value=6.9e-13  Score=62.43  Aligned_cols=44  Identities=16%  Similarity=0.240  Sum_probs=40.8

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++  +|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK--PSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSS--CCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            5678999999999999999999999999999999887  9999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.28  E-value=5.2e-13  Score=62.86  Aligned_cols=44  Identities=14%  Similarity=0.163  Sum_probs=39.5

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEK--PYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCC--SEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCc--CeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3666777777  9999999999999999999999999999999863

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=6.4e-13  Score=62.54  Aligned_cols=43  Identities=14%  Similarity=0.206  Sum_probs=38.9

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            3 SGSSGTGEK--PYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCCC--SEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCc--CccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566777777  9999999999999999999999999999999863

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.9e-13  Score=61.88  Aligned_cols=44  Identities=18%  Similarity=0.256  Sum_probs=40.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK--LSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCC--CCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCC--CCCCCCC
Confidence            5678899999999999999999999999999999988  9999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.28  E-value=3.3e-14  Score=71.40  Aligned_cols=52  Identities=21%  Similarity=0.523  Sum_probs=41.0

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHH
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNL  131 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l  131 (150)
                      .|++.|++++||.|.+||+.|...+.|.   .+|++++  +|+|+.|++.|....++
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k--~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTG--TFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTT--EEBCSSSCCBCEECTTC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCC--CEECCCCCCccccCccc
Confidence            4667788888888888888888887775   5677766  88898898888876554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=3.3e-13  Score=63.58  Aligned_cols=44  Identities=14%  Similarity=0.205  Sum_probs=39.4

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      +|+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSGSSGTGEK--PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCC--SEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCC--CeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4666777777  9999999999999999999999999999999863

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.8e-13  Score=62.99  Aligned_cols=44  Identities=11%  Similarity=0.151  Sum_probs=39.3

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      .|+++|++++  +|.|+.|++.|...+.|.+|+++|++++||.|+.
T Consensus         2 ~H~~~h~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            2 SSGSSGTGEK--PYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCC--SEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCCcCCCCCC--CeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            3666777777  9999999999999999999999999999999863

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.6e-13  Score=62.15  Aligned_cols=41  Identities=12%  Similarity=0.142  Sum_probs=31.4

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~~--~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSK--SYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCC--CEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCC--CeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            555666665  78888888888888888888888888888776

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.26  E-value=2.2e-12  Score=60.39  Aligned_cols=32  Identities=19%  Similarity=0.344  Sum_probs=12.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|+.|++.|...+.|..|+++|+++++|.|
T Consensus        10 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C   41 (45)
T 2epq_A           10 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG   41 (45)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHccCCCCCCC
Confidence            33344444444333334444433333333333

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=8.4e-13  Score=62.14  Aligned_cols=42  Identities=24%  Similarity=0.294  Sum_probs=30.9

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcC-CCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHL-GKEGTAP  147 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-~~~~~~~  147 (150)
                      |+++|.+++  +|.|+.|++.|...+.|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEK--CFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSC--CEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCC--CEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            455566655  77788888888888888888877777 7777775

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=3.5e-12  Score=59.94  Aligned_cols=41  Identities=22%  Similarity=0.260  Sum_probs=33.3

Q ss_pred             hhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCC
Q psy12196        106 FQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPA  148 (150)
Q Consensus       106 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  148 (150)
                      +.|++++  +|.|+.|++.|.....|..|+++|++++||.|..
T Consensus         5 ~~h~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGER--GHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCS--SCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCC--CcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            3455655  8889899999998888999988888888888864

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.5e-12  Score=61.50  Aligned_cols=44  Identities=20%  Similarity=0.246  Sum_probs=40.7

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHh-hhcCCCCCCcCCcch
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKF-QAHNDSVHQIQCPYC  121 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~~~~~~~C~~C  121 (150)
                      |+++|.++++|.|.+|++.|...+.|..|++ +|++++  +|+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k--~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK--PSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSC--SSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCC--CCCCCCC
Confidence            6678999999999999999999999999999 888887  9999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.25  E-value=1.3e-12  Score=60.20  Aligned_cols=41  Identities=22%  Similarity=0.441  Sum_probs=30.9

Q ss_pred             HHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         77 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        77 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      +++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~   42 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGES--GPSSG   42 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCC--SCCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCC--CCCCC
Confidence            456777778888888888888888888877777766  77764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=2.6e-12  Score=61.00  Aligned_cols=40  Identities=20%  Similarity=0.386  Sum_probs=21.5

Q ss_pred             cCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchh
Q psy12196         81 HNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCI  122 (150)
Q Consensus        81 ~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~  122 (150)
                      .++++|.|.+|++.|.....|..|+++|++++  +|.|++|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEK--PYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCC--CCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCC--CccCCCCC
Confidence            34455555555555555555555555555444  55555554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.2e-12  Score=61.00  Aligned_cols=41  Identities=15%  Similarity=0.106  Sum_probs=32.0

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      |+++|++++  +|.|+.|++.|...+.|..|+++|++++||.+
T Consensus         3 H~~~H~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEK--PYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCC--SEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCc--CeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            555666666  88888888888888888888888888888765

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=5.2e-12  Score=58.47  Aligned_cols=39  Identities=26%  Similarity=0.499  Sum_probs=32.1

Q ss_pred             hhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        107 QAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       107 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      .|++++  +|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         4 ~h~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNG--AFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSC--CBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCC--CEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            345555  888888999998888899998888888888886

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.3e-12  Score=61.41  Aligned_cols=43  Identities=16%  Similarity=0.301  Sum_probs=31.1

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK--PSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSS--CCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCC--CCCCCC
Confidence            4566777777777777777777777777777777666  777753

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.24  E-value=5.3e-12  Score=61.44  Aligned_cols=44  Identities=16%  Similarity=0.374  Sum_probs=38.8

Q ss_pred             CCcccccCCCCcccCChHHHHHHHH-hhcCCCcccCCCChhhhcc
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVK-MEHNSKSYQCNECPESFER   97 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~c~~c~~~~~~   97 (150)
                      .+++|.|++|++.|.....|..|++ +|.++++|.|.+|++.|.+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3478999999999999999999987 8999999999999998864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=1.5e-12  Score=61.26  Aligned_cols=43  Identities=19%  Similarity=0.301  Sum_probs=30.7

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK--PSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSC--SSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCC--CCCCCC
Confidence            4556777777777777777777777777777777666  777753

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.7e-12  Score=61.10  Aligned_cols=42  Identities=21%  Similarity=0.429  Sum_probs=30.4

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER--SSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCC--SCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCC--CCCCC
Confidence            4556777777777777777777777777777776666  77775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=1.5e-12  Score=61.30  Aligned_cols=43  Identities=19%  Similarity=0.332  Sum_probs=32.5

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK--PSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCC--CCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCC--CCCCCC
Confidence            4566777788888888888888888888877777766  777763

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.1e-12  Score=59.45  Aligned_cols=41  Identities=27%  Similarity=0.412  Sum_probs=29.0

Q ss_pred             HHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         77 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        77 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      +++|.++++|.|.+|++.|...+.|..|+++|++++  +|.|.
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~   42 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKS--GPSSG   42 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCS--SCCCC
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCC--CCCCC
Confidence            455677777777777777777777777777776665  66663

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2e-12  Score=60.83  Aligned_cols=43  Identities=28%  Similarity=0.444  Sum_probs=31.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK--PSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCC--CCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCC--CCCCCC
Confidence            4566777777888888888888888888877777766  777753

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.4e-12  Score=61.32  Aligned_cols=32  Identities=19%  Similarity=0.235  Sum_probs=14.1

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      +|.|+.|++.|.....|..|+++|++++||.|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A           12 PYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             SEECSSSCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CeeCcccCcccCChHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444443

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.7e-12  Score=61.07  Aligned_cols=43  Identities=23%  Similarity=0.363  Sum_probs=30.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK--PSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSS--CCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCC--CCCCCC
Confidence            4556777777777777777777777777777776665  777753

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.2e-12  Score=60.64  Aligned_cols=43  Identities=19%  Similarity=0.325  Sum_probs=32.1

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK--PSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCC--CSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCC--CCCCCC
Confidence            4566777778888888888888888888877777766  777753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.9e-12  Score=60.89  Aligned_cols=43  Identities=21%  Similarity=0.352  Sum_probs=30.8

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK--PSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCS--CSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCC--CCCCCC
Confidence            4556777777777777777777777777777777666  777753

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2e-12  Score=60.83  Aligned_cols=43  Identities=16%  Similarity=0.310  Sum_probs=32.5

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK--PSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCC--CCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCC--CCCCCC
Confidence            4566777788888888888888888888877777766  777753

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.8e-12  Score=60.95  Aligned_cols=43  Identities=16%  Similarity=0.333  Sum_probs=30.0

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |++.|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~--~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK--PSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCC--CCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCC--CCCCCC
Confidence            4556677777777777777777777777777776665  676653

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.6e-12  Score=61.15  Aligned_cols=33  Identities=27%  Similarity=0.385  Sum_probs=20.1

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|.|+.|++.|.....|..|+++|++++||.|+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A           12 PYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             TTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566666666666666666666666666666554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2e-12  Score=60.77  Aligned_cols=42  Identities=14%  Similarity=0.238  Sum_probs=30.0

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |++.|+++++|.|.+|++.|.....|..|+++|++++  +|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER--PSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCC--CSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCC--CCCCC
Confidence            4556677777777777777777777777777776665  67765

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.9e-12  Score=60.83  Aligned_cols=43  Identities=19%  Similarity=0.320  Sum_probs=30.5

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |++.|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--p~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK--PSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCC--CSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCC--CCCCCC
Confidence            4556677777777777777777777777777777666  677653

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.9e-12  Score=60.86  Aligned_cols=43  Identities=16%  Similarity=0.275  Sum_probs=32.1

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++  +|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER--PSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCC--SCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCC--CCCCCC
Confidence            4566777788888888888888888888877777766  777763

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.2e-12  Score=60.61  Aligned_cols=43  Identities=19%  Similarity=0.341  Sum_probs=30.6

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN--PSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSC--CCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCC--CCCCCC
Confidence            4556677777777777777777777777777776666  777753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.1e-12  Score=60.74  Aligned_cols=43  Identities=16%  Similarity=0.312  Sum_probs=31.6

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK--PSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSC--CCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCC--CCCCCC
Confidence            4566777777778778877777777777777777666  777753

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.22  E-value=1.2e-12  Score=63.74  Aligned_cols=51  Identities=14%  Similarity=0.137  Sum_probs=43.7

Q ss_pred             CcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCc
Q psy12196         64 PSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQI  116 (150)
Q Consensus        64 ~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~  116 (150)
                      ++.|.....|..|++.|+++++|.|.+|++.|...+.|..|+++|++++  +|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--p~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK--PG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS--CC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC--CC
Confidence            3567777778889999999999999999999999999999999888877  65

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2e-12  Score=60.81  Aligned_cols=43  Identities=23%  Similarity=0.373  Sum_probs=30.5

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK--PSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSC--CSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCC--CCCCCC
Confidence            4556677777777777777777777777777776665  777653

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.6e-12  Score=60.40  Aligned_cols=43  Identities=19%  Similarity=0.316  Sum_probs=29.4

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK--PSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSC--CCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCC--CCCCCC
Confidence            4456667777777777777777777777777776665  666653

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.2e-12  Score=60.62  Aligned_cols=43  Identities=26%  Similarity=0.383  Sum_probs=32.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK--PSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCC--SSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCC--CcCCCC
Confidence            5566777888888888888888888888887777766  777764

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2e-12  Score=60.76  Aligned_cols=43  Identities=16%  Similarity=0.317  Sum_probs=31.6

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |++.|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK--PSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSS--SSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCC--CCCCCC
Confidence            4556777777778778777777777777777777666  777753

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.4e-12  Score=60.51  Aligned_cols=43  Identities=21%  Similarity=0.384  Sum_probs=31.4

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK--PSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSC--CSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCC--CCCCCC
Confidence            4556777777777777777777777777777777666  777753

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.4e-12  Score=60.53  Aligned_cols=42  Identities=19%  Similarity=0.281  Sum_probs=31.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET--LSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCC--SSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCC--CCCCC
Confidence            5566777778888888888888888888877777766  77775

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3e-12  Score=59.59  Aligned_cols=42  Identities=24%  Similarity=0.412  Sum_probs=31.5

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+.+|++++  +|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES--GPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSS--CSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCC--CCCCC
Confidence            4566777778888888888888888888877777766  77764

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.5e-12  Score=60.46  Aligned_cols=43  Identities=19%  Similarity=0.348  Sum_probs=32.2

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~  120 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK--PSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCC--SSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCC--CCCCCC
Confidence            4566777778888888888888888888877777766  777753

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.2e-12  Score=60.03  Aligned_cols=42  Identities=21%  Similarity=0.368  Sum_probs=33.5

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQS--GPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSC--SCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCC--CCCCC
Confidence            5667788888888888888888888888888777766  77774

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.9e-12  Score=59.63  Aligned_cols=42  Identities=24%  Similarity=0.317  Sum_probs=31.2

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES--GPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSS--SSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCC--CCCCC
Confidence            4566777777888888888888888888877777666  77764

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.8e-12  Score=60.27  Aligned_cols=42  Identities=19%  Similarity=0.390  Sum_probs=30.8

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER--HSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCC--BTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCC--CCCCC
Confidence            4556777777777777777777777777777777666  77775

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.5e-12  Score=59.25  Aligned_cols=43  Identities=23%  Similarity=0.357  Sum_probs=39.8

Q ss_pred             HHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         77 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        77 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      +++|.++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK--PSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCC--CCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCC--CCCCCCC
Confidence            457889999999999999999999999999999888  9999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.2e-12  Score=60.35  Aligned_cols=39  Identities=21%  Similarity=0.367  Sum_probs=28.7

Q ss_pred             hhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        107 QAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       107 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|.+++  +|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         6 ~h~~~k--~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQK--PFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCC--SEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCc--CccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            445555  777777777777777777777777777777775

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=3.4e-12  Score=59.42  Aligned_cols=42  Identities=17%  Similarity=0.303  Sum_probs=32.6

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+.+|++++  +|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS--GPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCC--SSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCC--CCCCC
Confidence            5567778888888888888888888888887777766  77764

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.5e-12  Score=60.48  Aligned_cols=43  Identities=16%  Similarity=0.268  Sum_probs=32.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcC-CCCCCcCCcc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN-DSVHQIQCPY  120 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~-~~~~~~~C~~  120 (150)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++ ++  +|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~--~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVK--SGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCT--TSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCC--CCCCCC
Confidence            45667788888888888888888888888877776 66  777753

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.3e-12  Score=58.79  Aligned_cols=41  Identities=17%  Similarity=0.317  Sum_probs=32.8

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCC
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  118 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C  118 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG--PSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCS--CCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCC--CCCC
Confidence            4567788888888888888888888888888887776  7766

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=4.6e-12  Score=58.94  Aligned_cols=42  Identities=21%  Similarity=0.382  Sum_probs=32.6

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |++.|.++++|.|.+|++.|...+.|..|+++|++++  +|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKS--GPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCC--CTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCC--CcCCC
Confidence            5567778888888888888888888888887777766  77774

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.7e-12  Score=59.50  Aligned_cols=42  Identities=17%  Similarity=0.343  Sum_probs=31.4

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++  +|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK--PSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSC--CCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCC--CCCCC
Confidence            3456777778888888888888888888877777766  77775

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=4.7e-12  Score=57.98  Aligned_cols=37  Identities=14%  Similarity=0.203  Sum_probs=26.5

Q ss_pred             hcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        108 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       108 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      |++++  +|.|+.|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k--~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQR--VYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCC--CEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCC--CeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            44444  77777777777777777777777777777765

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=4e-12  Score=58.54  Aligned_cols=41  Identities=22%  Similarity=0.336  Sum_probs=30.2

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCC
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  118 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C  118 (150)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++  +|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG--PSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCS--STTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCC--CCCC
Confidence            3456777777888888888888778888877777766  6665

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3e-12  Score=60.17  Aligned_cols=42  Identities=19%  Similarity=0.347  Sum_probs=28.2

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++  +|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK--SSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTT--CCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCC--CCCCC
Confidence            4556666677777777777777777777776666665  66665

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.3e-12  Score=59.60  Aligned_cols=42  Identities=19%  Similarity=0.338  Sum_probs=32.0

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+.+|++++  +|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK--PSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCC--CCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCC--CCCCC
Confidence            4566777788888888888888888888877777766  77775

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.5e-12  Score=58.75  Aligned_cols=41  Identities=17%  Similarity=0.377  Sum_probs=30.2

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCC
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  118 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C  118 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~--~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG--PSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCC--SSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCC--CCCC
Confidence            3456777777788888887877777777777777766  6665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.17  E-value=5.3e-12  Score=58.09  Aligned_cols=41  Identities=17%  Similarity=0.328  Sum_probs=28.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCC
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  118 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C  118 (150)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++  +|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k--~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG--PSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCC--CCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCC--CCCC
Confidence            3455667777777777777777777777777776666  6665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.2e-12  Score=59.06  Aligned_cols=43  Identities=19%  Similarity=0.254  Sum_probs=39.6

Q ss_pred             HHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         77 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        77 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      +++|+++++|.|.+|++.|.....|..|+++|++++  +|.|+.|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK--PSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSC--CCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCC--CCCCCCC
Confidence            457889999999999999999999999999998887  9999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=1.6e-11  Score=58.18  Aligned_cols=40  Identities=18%  Similarity=0.335  Sum_probs=36.3

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChh
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPE   93 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~   93 (150)
                      .+++|.|.+|++.|.....|..|+++|+++++|.|.+|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3478999999999999999999999999999999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=1.9e-11  Score=57.07  Aligned_cols=42  Identities=19%  Similarity=0.305  Sum_probs=39.4

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchh
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCI  122 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~  122 (150)
                      .|+++++|.|.+|++.|...+.|..|+++|++++  +|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~--~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV--GKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCC--CCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCC--CCCCcCCC
Confidence            5789999999999999999999999999999988  99999986

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=7.7e-12  Score=58.18  Aligned_cols=40  Identities=18%  Similarity=0.261  Sum_probs=25.9

Q ss_pred             HHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCC
Q psy12196         77 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  118 (150)
Q Consensus        77 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C  118 (150)
                      ++.|.++++|.|.+|++.|...+.|..|+++|++++  +|+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGES--GPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSC--CCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCC--CCCC
Confidence            445666666666666666666666666666666655  6665

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.9e-12  Score=59.78  Aligned_cols=42  Identities=19%  Similarity=0.253  Sum_probs=31.9

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++  +|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~--~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD--PSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSC--CSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCC--CCCCC
Confidence            5566777788888888888888888888877777766  77775

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.7e-12  Score=58.62  Aligned_cols=42  Identities=33%  Similarity=0.505  Sum_probs=33.3

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~--~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKS--GPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCC--CCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCC--CCCCC
Confidence            5567788888888888888888888888888887776  77763

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.14  E-value=2.1e-11  Score=55.14  Aligned_cols=33  Identities=15%  Similarity=0.346  Sum_probs=28.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      +|.|+.|++.|...+.|..|+++|++++||...
T Consensus         6 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            6 SYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             ceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            888999999999999999999998888888754

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=2.6e-11  Score=56.07  Aligned_cols=38  Identities=32%  Similarity=0.579  Sum_probs=21.9

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      |+++++|.|.+|++.|...+.|..|+++|++++  +|.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDK--SGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTT--CSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCC--CccCC
Confidence            455555666666666666666666655555554  55554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=2.4e-11  Score=57.05  Aligned_cols=40  Identities=13%  Similarity=0.317  Sum_probs=23.7

Q ss_pred             HhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         78 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        78 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      +.|+++++|.|.+|++.|...+.|..|+++|++++  +|+|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK--PSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCC--CSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCC--CCCCC
Confidence            34555666666666666666666666666665555  55554

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.5e-11  Score=57.13  Aligned_cols=41  Identities=24%  Similarity=0.303  Sum_probs=30.1

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCC
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  118 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C  118 (150)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++  +|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS--GPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCS--CCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCC--CCCC
Confidence            4566777777777777777777777777777777766  6655

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.4e-11  Score=58.37  Aligned_cols=27  Identities=26%  Similarity=0.133  Sum_probs=11.5

Q ss_pred             chhhhccCchHHHHHHHHhcCCCCCCC
Q psy12196        120 YCITDFSEDKNLIQHIVSVHLGKEGTA  146 (150)
Q Consensus       120 ~C~~~f~~~~~l~~H~~~~~~~~~~~~  146 (150)
                      .|++.|.....|..|+++|++++||.|
T Consensus        19 ~C~k~f~~~~~L~~H~~~H~~~k~~~C   45 (48)
T 2ent_A           19 GCGWRFSRSDELSRHRRSHSGVKPSGP   45 (48)
T ss_dssp             SCCCEESSHHHHHHHHTTSCCCCSCSS
T ss_pred             CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344444444444444444444444443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=99.10  E-value=5.6e-11  Score=51.65  Aligned_cols=32  Identities=28%  Similarity=0.464  Sum_probs=29.0

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCCCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGKEGT  145 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~  145 (150)
                      +||.|+.|++.|...+.|..|+.+|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            37899999999999999999999999999885

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1.8e-12  Score=67.43  Aligned_cols=66  Identities=21%  Similarity=0.248  Sum_probs=48.4

Q ss_pred             HHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196         73 LSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus        73 l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      |..|+..+.+++++.|..|+..|. ...|..|+ .+.+++  ++.|+.|++.|. ...|..|+.++.+++.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~--~~~C~~C~~~~~-~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGAR--TELCGNCGRNVL-VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHC--EEECSSSCCEEE-TTGGGTHHHHBTTBSS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCC--ceEcccCCCcCc-HHHHHHHHHHccCCcC
Confidence            445666677788888888888774 77778887 666666  778888888776 4778888877776543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.9e-11  Score=54.48  Aligned_cols=38  Identities=21%  Similarity=0.397  Sum_probs=27.1

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCC
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQC  118 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C  118 (150)
                      +|+++++|.|.+|++.|...+.|..|+++|++++  +|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k--~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSG--PSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCS--CSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCC--CcCC
Confidence            4666777777777777777777777777776665  6665

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.9e-11  Score=55.98  Aligned_cols=40  Identities=18%  Similarity=0.358  Sum_probs=27.4

Q ss_pred             HhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCc
Q psy12196         78 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCP  119 (150)
Q Consensus        78 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~  119 (150)
                      +.|+++++|.|.+|++.|.....|..|+++|++++  +|.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k--~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK--SGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCC--CCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCC--CCCCC
Confidence            34666677777777777777777777776666665  66665

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.9e-11  Score=53.50  Aligned_cols=35  Identities=29%  Similarity=0.529  Sum_probs=28.4

Q ss_pred             hhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196        107 QAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus       107 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      +|++++  +|.|+.|++.|...+.|..|+++|++++|
T Consensus         3 ~h~~~k--~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGR--SYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCC--CCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCC--CcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            455555  88899999999998899999988888765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=1.2e-10  Score=58.33  Aligned_cols=38  Identities=18%  Similarity=0.294  Sum_probs=31.6

Q ss_pred             cCCCCCCcCCcc--hhhhccCchHHHHHH-HHhcCCCCCCCCC
Q psy12196        109 HNDSVHQIQCPY--CITDFSEDKNLIQHI-VSVHLGKEGTAPA  148 (150)
Q Consensus       109 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~~~  148 (150)
                      ++++  ||+|+.  |+++|...++|.+|+ ++|++++||.|..
T Consensus        23 sGEK--PYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYR--PYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSC--SCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cCCC--CeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4454  999965  999999999999997 6899999998764

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.4e-11  Score=56.25  Aligned_cols=43  Identities=19%  Similarity=0.271  Sum_probs=39.3

Q ss_pred             HHhhcCCCcccCC--CChhhhcchhHHhhHHhhhcCCCCCCcCCcch
Q psy12196         77 VKMEHNSKSYQCN--ECPESFERLNKLKRHKFQAHNDSVHQIQCPYC  121 (150)
Q Consensus        77 ~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C  121 (150)
                      .++|+++++|.|.  +|++.|.....|..|+++|++++  +|+|..|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k--~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK--PSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCC--SCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCC--CCCCCCC
Confidence            4578899999998  89999999999999999998887  9999987

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.01  E-value=1.3e-10  Score=51.02  Aligned_cols=33  Identities=27%  Similarity=0.487  Sum_probs=26.0

Q ss_pred             cCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196        109 HNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus       109 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      ++++  +|.|+.|++.|...+.|..|+++|++++|
T Consensus         3 ~~~k--~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            3 SGSS--GYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCC--SEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCC--CeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4444  88888888888888888888888887764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.99  E-value=1.1e-10  Score=51.96  Aligned_cols=36  Identities=25%  Similarity=0.312  Sum_probs=25.4

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      |+++|++++  +|.|+.|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k--~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIK--PFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSS--SBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCC--CccCCCCCcccCcHHHHHHHHHHhccC
Confidence            445556655  777888888888877888887777653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.96  E-value=2e-10  Score=50.46  Aligned_cols=29  Identities=17%  Similarity=0.381  Sum_probs=22.4

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      +|.|+.|++.|...+.|..|+++|++++|
T Consensus         7 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            7 PFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            77788888888888888888877777654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=6.5e-10  Score=49.70  Aligned_cols=31  Identities=16%  Similarity=0.259  Sum_probs=27.0

Q ss_pred             CcCCc--chhhhccCchHHHHHHHHhcCCCCCC
Q psy12196        115 QIQCP--YCITDFSEDKNLIQHIVSVHLGKEGT  145 (150)
Q Consensus       115 ~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~  145 (150)
                      +|.|.  .|++.|...+.|.+|+++|++++||.
T Consensus         6 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            6 PFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             ceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            88898  59999999999999999998888873

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=6.6e-10  Score=49.68  Aligned_cols=28  Identities=18%  Similarity=0.290  Sum_probs=23.3

Q ss_pred             CCcCCcc--hhhhccCchHHHHHHHHhcCC
Q psy12196        114 HQIQCPY--CITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       114 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +||+|+.  |+++|...+.|.+|+++|+++
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3888875  888888888888888888765

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.90  E-value=9.6e-10  Score=49.46  Aligned_cols=32  Identities=25%  Similarity=0.461  Sum_probs=16.9

Q ss_pred             cCCCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         81 HNSKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        81 ~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      +++++|.|.+|++.|...+.|..|+++|++++
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   33 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDR   33 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCc
Confidence            34455555555555555555555555555444

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.89  E-value=3.9e-10  Score=50.14  Aligned_cols=35  Identities=26%  Similarity=0.490  Sum_probs=27.4

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcC
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN  110 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~  110 (150)
                      |++.|+++++|.|.+|++.|...+.|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45667788888888888888888888888777665

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.88  E-value=4.5e-10  Score=49.51  Aligned_cols=29  Identities=24%  Similarity=0.304  Sum_probs=23.1

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCCCCCCCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGKEGTAPAR  149 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~  149 (150)
                      +||.|+.|+++|...++|.+|+       ||.|..|
T Consensus         7 kp~~C~~CgK~F~~~s~L~~H~-------py~C~~r   35 (36)
T 1fv5_A            7 ARFMCLPCGIAFSSPSTLEAHQ-------AYYCSHR   35 (36)
T ss_dssp             CCCEETTTTEECSCHHHHHHHH-------HHTSTTC
T ss_pred             cCeECCCCCCccCCHhHccCcC-------CeECcCC
Confidence            3888888888888888888887       7777665

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=8.9e-10  Score=48.93  Aligned_cols=34  Identities=26%  Similarity=0.511  Sum_probs=26.6

Q ss_pred             hhcCCCCCCcCCcchhhhccCc-hHHHHHHHHhcCCC
Q psy12196        107 QAHNDSVHQIQCPYCITDFSED-KNLIQHIVSVHLGK  142 (150)
Q Consensus       107 ~~~~~~~~~~~C~~C~~~f~~~-~~l~~H~~~~~~~~  142 (150)
                      +|.+++  +|.|+.|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~k--~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGR--AMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCC--CEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCC--CeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            345555  88888888888888 88888888887764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.86  E-value=2.7e-10  Score=56.88  Aligned_cols=45  Identities=20%  Similarity=0.428  Sum_probs=36.9

Q ss_pred             CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHh
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLK  102 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~  102 (150)
                      ++||.|+.|++.|.....|.   ..|+++++|.|.+||+.|....++.
T Consensus        12 ~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A           12 RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             CCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            47899999999998877775   7888999999999999888766543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.2e-09  Score=48.10  Aligned_cols=33  Identities=21%  Similarity=0.291  Sum_probs=25.2

Q ss_pred             hcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        108 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       108 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      |.+++  +|.|+.|++.|.....|..|+++|++++
T Consensus         4 h~~~k--~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGK--PYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCC--SEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCC--CCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            34444  8888888888888888888888887653

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.85  E-value=3.6e-09  Score=45.71  Aligned_cols=31  Identities=32%  Similarity=0.676  Sum_probs=21.6

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCCCccc
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNSKSYQ   87 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~   87 (150)
                      ||.|++|++.|.....|..|+.+|+++++|.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5667777777777777777777777766653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=2e-09  Score=47.42  Aligned_cols=33  Identities=15%  Similarity=0.246  Sum_probs=25.4

Q ss_pred             hcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        108 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       108 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +.+++  +|.|+.|++.|.....|..|+++|++++
T Consensus         4 h~~~~--~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGK--THLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCS--SCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCC--CeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            34444  8888888888888888888888887764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=4.2e-09  Score=52.82  Aligned_cols=39  Identities=15%  Similarity=0.220  Sum_probs=29.1

Q ss_pred             ccCCcccccCC--CCcccCChHHHHHHH-HhhcCCCcccCCC
Q psy12196         52 QTHTLMFTCRR--CPSTFLNSATLSKHV-KMEHNSKSYQCNE   90 (150)
Q Consensus        52 ~~~~~~~~c~~--c~~~f~~~~~l~~h~-~~~~~~~~~~c~~   90 (150)
                      ..+++||.|..  |+++|.....|..|+ ++|++++|+.|.+
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            34557888864  888888888888886 5788888887765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.84  E-value=2.4e-09  Score=44.97  Aligned_cols=29  Identities=31%  Similarity=0.552  Sum_probs=25.9

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      +|.|+.|++.|...+.|..|+++|+++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            78999999999999999999999988764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.84  E-value=5.3e-11  Score=51.34  Aligned_cols=30  Identities=23%  Similarity=0.443  Sum_probs=22.1

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      ||.|+.|++.|...+.|..|+++|++++|+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            677777777777777777777777777765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.3e-09  Score=48.08  Aligned_cols=33  Identities=18%  Similarity=0.316  Sum_probs=24.2

Q ss_pred             hcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        108 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       108 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      |.+++  +|.|+.|++.|...+.|..|+++|++++
T Consensus         4 h~~~k--~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGK--PFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCC--SEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCC--CccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            34444  7888888888888888888888777653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=8.6e-10  Score=48.97  Aligned_cols=34  Identities=26%  Similarity=0.487  Sum_probs=23.2

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      +|+++++|.|.+|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            4566677777777777777777777776666554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=2.5e-09  Score=47.12  Aligned_cols=28  Identities=25%  Similarity=0.394  Sum_probs=23.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +|.|+.|++.|.....|..|+++|++++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            9 IFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            8888888888888888888888887663

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=1.2e-11  Score=66.24  Aligned_cols=52  Identities=15%  Similarity=0.340  Sum_probs=34.8

Q ss_pred             CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcC
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN  110 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~  110 (150)
                      +++|.|+.|++.|.....|..|+++|++++||.|..|.+    ...|..|.+++.+
T Consensus        23 ~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           23 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            367777777777777777777777777777777776543    3334445444444

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.79  E-value=3.5e-09  Score=44.11  Aligned_cols=28  Identities=25%  Similarity=0.451  Sum_probs=24.0

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +|.|+.|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            7889999999999999999998887763

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.2e-09  Score=48.21  Aligned_cols=27  Identities=15%  Similarity=0.304  Sum_probs=20.4

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +|.|+.|++.|...+.|..|+++|+++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            9 LYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            777777777777777777777777655

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.78  E-value=3.7e-09  Score=43.99  Aligned_cols=29  Identities=24%  Similarity=0.424  Sum_probs=25.1

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ++|.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            37889999999999999999999988764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.78  E-value=3.1e-09  Score=46.43  Aligned_cols=33  Identities=24%  Similarity=0.478  Sum_probs=21.6

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      |+++++|.|.+|++.|...+.|..|++.|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            456666677777777766666666666665544

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.78  E-value=2.2e-09  Score=44.81  Aligned_cols=28  Identities=29%  Similarity=0.532  Sum_probs=23.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +|.|+.|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            7888888888888888888888887663

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.4e-09  Score=48.36  Aligned_cols=32  Identities=16%  Similarity=0.179  Sum_probs=21.9

Q ss_pred             hhcCCCCCCcCCcchhhhccCchHHHHH-HHHhcC
Q psy12196        107 QAHNDSVHQIQCPYCITDFSEDKNLIQH-IVSVHL  140 (150)
Q Consensus       107 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~  140 (150)
                      +|++++  ||+|+.|++.|...+.|..| +..|++
T Consensus         3 ~H~~~k--~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGH--LYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSC--EEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCc--CeECCCCCcccCCHHHHHHHHHHHccC
Confidence            344544  77777777777777777777 666654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.77  E-value=3.6e-09  Score=46.24  Aligned_cols=33  Identities=15%  Similarity=0.333  Sum_probs=22.6

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      |.++++|.|.+|++.|...+.|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            556677777777777777777777776666554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.76  E-value=1.8e-09  Score=50.92  Aligned_cols=30  Identities=23%  Similarity=0.390  Sum_probs=17.9

Q ss_pred             CcCCcchhhhccCchHHHHHHH-HhcCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIV-SVHLGKEG  144 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~  144 (150)
                      +|.|..|++.|.....|..|++ +|.++.+.
T Consensus         7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            7 PYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            6677777777777777777766 66555443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.74  E-value=4e-09  Score=43.89  Aligned_cols=28  Identities=25%  Similarity=0.427  Sum_probs=24.2

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +|.|+.|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            7889999999999999999998888764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=5.4e-09  Score=46.66  Aligned_cols=32  Identities=19%  Similarity=0.145  Sum_probs=18.2

Q ss_pred             hcCCCcccCCC--ChhhhcchhHHhhHHhhhcCC
Q psy12196         80 EHNSKSYQCNE--CPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        80 ~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      +++++||.|.+  |++.|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34555666654  666666666666666555543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.74  E-value=3.4e-09  Score=44.46  Aligned_cols=29  Identities=28%  Similarity=0.589  Sum_probs=23.3

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ++|.|..|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            37888888888888888888888887653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=1.2e-09  Score=45.66  Aligned_cols=28  Identities=29%  Similarity=0.470  Sum_probs=23.8

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +|.|+.|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            7889999999999889999988887653

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.71  E-value=1.3e-09  Score=51.21  Aligned_cols=38  Identities=18%  Similarity=0.325  Sum_probs=29.3

Q ss_pred             hHHhhhcCCCCCCcCCc--chhhhccCchHHHHHHHHhcCCC
Q psy12196        103 RHKFQAHNDSVHQIQCP--YCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      .|...|++++  +|.|+  .|++.|...+.|..|+++|++++
T Consensus         8 ~~~~~H~~~k--~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDK--TFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTT--EEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCC--CeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3444566766  88895  69999999999999998888764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.71  E-value=7.8e-09  Score=44.15  Aligned_cols=29  Identities=24%  Similarity=0.397  Sum_probs=24.2

Q ss_pred             CCcCCc--chhhhccCchHHHHHHHHhcCCC
Q psy12196        114 HQIQCP--YCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       114 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ++|.|+  .|++.|...+.|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            378888  89999999999999998888764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=7.5e-10  Score=59.15  Aligned_cols=58  Identities=16%  Similarity=0.201  Sum_probs=45.0

Q ss_pred             HHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcC
Q psy12196         77 VKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus        77 ~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      ..+|+++++|.|.+|++.|...+.|..|+++|++++  +|+|..|.    ....|..|.+.+.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ek--p~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEF--QKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHH--HHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCC--Ccccchhh----hHHHHHhhhccccc
Confidence            456888899999999999999999999998888877  88887754    34555566666654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=2.9e-09  Score=47.27  Aligned_cols=32  Identities=31%  Similarity=0.399  Sum_probs=23.5

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhH-HhhhcC
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRH-KFQAHN  110 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h-~~~~~~  110 (150)
                      +|++++||.|.+|++.|...+.|..| +..|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            46677777787788777777777777 666654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=9.8e-09  Score=45.07  Aligned_cols=32  Identities=28%  Similarity=0.526  Sum_probs=19.4

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      |.++++|.|.+|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            45556666666666666666666666655544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=8.6e-09  Score=45.27  Aligned_cols=32  Identities=19%  Similarity=0.376  Sum_probs=20.4

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      |.++++|.|.+|++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            55666666666666666666666666665543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.69  E-value=5.4e-09  Score=44.35  Aligned_cols=28  Identities=25%  Similarity=0.471  Sum_probs=22.9

Q ss_pred             CcCCc--chhhhccCchHHHHHHHHhcCCC
Q psy12196        115 QIQCP--YCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       115 ~~~C~--~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ||.|+  .|++.|...+.|..|+++|++++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            77887  88888888888888888887663

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=6.9e-09  Score=45.62  Aligned_cols=33  Identities=18%  Similarity=0.380  Sum_probs=21.4

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      .|.++++|.|.+|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            355666677777777777766777676665543

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=6.5e-09  Score=53.81  Aligned_cols=56  Identities=16%  Similarity=0.316  Sum_probs=47.3

Q ss_pred             CCcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         54 HTLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        54 ~~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      ..+++.|..|+..|. ...|..|+ .+.+++++.|..|++.|. ...|..|+.++.++.
T Consensus        14 ~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           14 PLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             CCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            348899999999994 88899998 889999999999999877 588899988877654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=2.1e-09  Score=45.17  Aligned_cols=29  Identities=21%  Similarity=0.329  Sum_probs=24.1

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ++|.|+.|++.|...+.|..|+++|++++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            37889999999998888999988887653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=5.9e-09  Score=46.15  Aligned_cols=33  Identities=18%  Similarity=0.381  Sum_probs=22.3

Q ss_pred             hhcCCCcccCCCChhhhcch-hHHhhHHhhhcCC
Q psy12196         79 MEHNSKSYQCNECPESFERL-NKLKRHKFQAHND  111 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~-~~l~~h~~~~~~~  111 (150)
                      +|.++++|.|.+|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            45666777777777777776 6777777666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.67  E-value=4.9e-09  Score=46.14  Aligned_cols=25  Identities=20%  Similarity=0.493  Sum_probs=14.5

Q ss_pred             cCCCcccCCCChhhhcchhHHhhHH
Q psy12196         81 HNSKSYQCNECPESFERLNKLKRHK  105 (150)
Q Consensus        81 ~~~~~~~c~~c~~~~~~~~~l~~h~  105 (150)
                      .+++||.|.+||+.|...+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3455566666666666666655554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.67  E-value=1e-08  Score=45.41  Aligned_cols=32  Identities=16%  Similarity=0.182  Sum_probs=24.7

Q ss_pred             cCCCCCCcCCc--chhhhccCchHHHHHHHHhcCCC
Q psy12196        109 HNDSVHQIQCP--YCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       109 ~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ++++  +|.|.  .|++.|...+.|..|+++|++++
T Consensus         4 ~~~k--~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            4 GKKK--QHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSCC--CEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCC--CCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            4444  88887  48888888888888888887764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=9.2e-09  Score=45.20  Aligned_cols=32  Identities=19%  Similarity=0.398  Sum_probs=21.6

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      |.++++|.|.+|++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            55666777777777777777777776666543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=2e-08  Score=50.42  Aligned_cols=28  Identities=21%  Similarity=0.383  Sum_probs=17.1

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ||.|..|++.|...+.|.+|+++|+++.
T Consensus        13 py~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           13 ILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            6666666666666666666666665543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=1.7e-08  Score=44.85  Aligned_cols=32  Identities=22%  Similarity=0.489  Sum_probs=18.2

Q ss_pred             cCCCcccCC--CChhhhcchhHHhhHHhhhcCCC
Q psy12196         81 HNSKSYQCN--ECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        81 ~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      +++++|.|.  .|++.|...+.|..|+++|++++
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            445556665  36666666666666655555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.63  E-value=7.2e-09  Score=42.37  Aligned_cols=26  Identities=23%  Similarity=0.387  Sum_probs=18.9

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      +|.|+.|++.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777777777777777777777664

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.62  E-value=1.2e-08  Score=48.04  Aligned_cols=33  Identities=21%  Similarity=0.448  Sum_probs=22.9

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHh-hhcCCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKF-QAHNDS  112 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~-~~~~~~  112 (150)
                      |+++++|.|.+|++.|.....|..|++ +|.++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            567777777777777777777777777 666554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.62  E-value=1.1e-08  Score=41.90  Aligned_cols=26  Identities=12%  Similarity=0.331  Sum_probs=20.3

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhc
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      ++|.|+.|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            37788888888888888888887663

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2.4e-08  Score=43.80  Aligned_cols=31  Identities=23%  Similarity=0.409  Sum_probs=17.6

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHN  110 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~  110 (150)
                      +.++++|.|.+|++.|...+.|..|+++|++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            3455555666666666555556555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.58  E-value=9.6e-09  Score=42.39  Aligned_cols=25  Identities=20%  Similarity=0.337  Sum_probs=19.1

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      +|.|+.|++.|...+.|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcC
Confidence            7777788888887777877777664

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.57  E-value=1.5e-08  Score=42.49  Aligned_cols=27  Identities=22%  Similarity=0.335  Sum_probs=21.3

Q ss_pred             CcCCcchhhhccCchHHHHH-HHHhcCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQH-IVSVHLG  141 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H-~~~~~~~  141 (150)
                      +|.|+.|++.|...+.|..| +.+|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            67888888888888888888 5666655

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.56  E-value=8.1e-09  Score=42.34  Aligned_cols=24  Identities=17%  Similarity=0.437  Sum_probs=17.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHh
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      ||.|+.|++.|...+.|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            677777777777777777777655

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.96  E-value=8.1e-09  Score=41.88  Aligned_cols=24  Identities=25%  Similarity=0.450  Sum_probs=19.9

Q ss_pred             CcCCcchhhhccCchHHHHHHHHh
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      ||.|+.|++.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            778888888888888888888776

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.50  E-value=5.1e-08  Score=43.06  Aligned_cols=32  Identities=16%  Similarity=0.332  Sum_probs=18.2

Q ss_pred             hcCCCcccCCC--ChhhhcchhHHhhHHhhhcCC
Q psy12196         80 EHNSKSYQCNE--CPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        80 ~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      |+++++|.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            44555666653  666666666666665555543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.50  E-value=1.2e-08  Score=43.70  Aligned_cols=29  Identities=28%  Similarity=0.541  Sum_probs=20.4

Q ss_pred             CcccCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         84 KSYQCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      +||.|.+|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            35677777777777777777777666655

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.49  E-value=1.7e-07  Score=38.67  Aligned_cols=27  Identities=26%  Similarity=0.625  Sum_probs=16.4

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      +|.|+.|++.|.....|..|+..|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            456666666666666666666666544

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.46  E-value=1e-07  Score=39.38  Aligned_cols=27  Identities=33%  Similarity=0.812  Sum_probs=14.4

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      ||.|+.|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.46  E-value=1.4e-07  Score=38.87  Aligned_cols=27  Identities=26%  Similarity=0.695  Sum_probs=17.1

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      +|.|+.|++.|.....|..|++.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            556666666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=1.1e-07  Score=39.56  Aligned_cols=26  Identities=15%  Similarity=0.536  Sum_probs=13.6

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~   82 (150)
                      +|.|+.|++.|.....|..|++.|++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhcc
Confidence            44555555555555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.44  E-value=2.1e-07  Score=38.65  Aligned_cols=28  Identities=25%  Similarity=0.608  Sum_probs=16.2

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCCC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNSK   84 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~   84 (150)
                      +|.|+.|++.|.....|..|+..|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4556666666666666666665555543

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=1.3e-08  Score=47.70  Aligned_cols=37  Identities=22%  Similarity=0.468  Sum_probs=28.6

Q ss_pred             HHHHhhcCCCcccCC--CChhhhcchhHHhhHHhhhcCC
Q psy12196         75 KHVKMEHNSKSYQCN--ECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~--~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      .|+..|+++++|.|.  .|++.|...+.|..|+++|+++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            344567888888885  6888888888888888887765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.41  E-value=1.8e-07  Score=38.51  Aligned_cols=27  Identities=22%  Similarity=0.501  Sum_probs=15.2

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      ||.|+.|++.|.....|..|+..|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.41  E-value=1.5e-07  Score=47.26  Aligned_cols=28  Identities=18%  Similarity=0.397  Sum_probs=17.0

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCC
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            5566666666666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.40  E-value=2.7e-07  Score=38.80  Aligned_cols=27  Identities=26%  Similarity=0.557  Sum_probs=15.6

Q ss_pred             ccccC--CCCcccCChHHHHHHHHhhcCC
Q psy12196         57 MFTCR--RCPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        57 ~~~c~--~c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      ||.|+  .|++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5666666666666666555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.37  E-value=1.6e-07  Score=38.19  Aligned_cols=24  Identities=21%  Similarity=0.628  Sum_probs=12.4

Q ss_pred             CcccCCCChhhhcchhHHhhHHhh
Q psy12196         84 KSYQCNECPESFERLNKLKRHKFQ  107 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h~~~  107 (150)
                      ++|.|.+||+.|...+.|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            345555555555555555555443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.36  E-value=3e-07  Score=38.94  Aligned_cols=26  Identities=23%  Similarity=0.623  Sum_probs=13.3

Q ss_pred             ccccC--CCCcccCChHHHHHHHHhhcC
Q psy12196         57 MFTCR--RCPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        57 ~~~c~--~c~~~f~~~~~l~~h~~~~~~   82 (150)
                      ||.|+  .|++.|.....|..|+++|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            44554  455555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=1.7e-07  Score=38.43  Aligned_cols=25  Identities=20%  Similarity=0.538  Sum_probs=12.7

Q ss_pred             CcccCCCChhhhcchhHHhhHHhhh
Q psy12196         84 KSYQCNECPESFERLNKLKRHKFQA  108 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h~~~~  108 (150)
                      ++|.|.+|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555554443

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.35  E-value=1.3e-07  Score=38.55  Aligned_cols=24  Identities=21%  Similarity=0.480  Sum_probs=13.6

Q ss_pred             CcccCCCChhhhcchhHHhhHHhh
Q psy12196         84 KSYQCNECPESFERLNKLKRHKFQ  107 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h~~~  107 (150)
                      +||.|.+||+.|...+.|..|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            455555555555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.33  E-value=3.6e-07  Score=36.99  Aligned_cols=24  Identities=25%  Similarity=0.778  Sum_probs=12.0

Q ss_pred             cccCCCCcccCChHHHHHHHHhhc
Q psy12196         58 FTCRRCPSTFLNSATLSKHVKMEH   81 (150)
Q Consensus        58 ~~c~~c~~~f~~~~~l~~h~~~~~   81 (150)
                      |.|..|++.|.....|..|++.|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            445555555555555555544444

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.65  E-value=7.5e-08  Score=39.90  Aligned_cols=25  Identities=28%  Similarity=0.458  Sum_probs=11.7

Q ss_pred             cccCCCChhhhcchhHHhhHHhhhc
Q psy12196         85 SYQCNECPESFERLNKLKRHKFQAH  109 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h~~~~~  109 (150)
                      ||.|.+|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            3444444444444444444444443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.31  E-value=1.2e-07  Score=39.21  Aligned_cols=25  Identities=20%  Similarity=0.364  Sum_probs=19.1

Q ss_pred             CcCCc--chhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCP--YCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~--~C~~~f~~~~~l~~H~~~~~  139 (150)
                      +|.|+  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            66777  78888888888888877765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.63  E-value=8.3e-08  Score=40.01  Aligned_cols=27  Identities=30%  Similarity=0.544  Sum_probs=14.4

Q ss_pred             CcccCCCChhhhcchhHHhhHHhhhcC
Q psy12196         84 KSYQCNECPESFERLNKLKRHKFQAHN  110 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h~~~~~~  110 (150)
                      ++|.|..|++.|...+.|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            345555555555555555555554443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.26  E-value=4.7e-07  Score=37.59  Aligned_cols=26  Identities=23%  Similarity=0.567  Sum_probs=12.0

Q ss_pred             ccccCCCCcccCChHHHHHH-HHhhcC
Q psy12196         57 MFTCRRCPSTFLNSATLSKH-VKMEHN   82 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h-~~~~~~   82 (150)
                      +|.|+.|++.|.....|..| +..|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            34444444444444444444 344443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=1.9e-07  Score=37.56  Aligned_cols=23  Identities=26%  Similarity=0.625  Sum_probs=12.9

Q ss_pred             cccCCCChhhhcchhHHhhHHhh
Q psy12196         85 SYQCNECPESFERLNKLKRHKFQ  107 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h~~~  107 (150)
                      ||.|.+||+.|...+.|..|+++
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            45555555555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.01  E-value=3.6e-06  Score=34.40  Aligned_cols=23  Identities=26%  Similarity=0.756  Sum_probs=10.9

Q ss_pred             cccC--CCCcccCChHHHHHHHHhh
Q psy12196         58 FTCR--RCPSTFLNSATLSKHVKME   80 (150)
Q Consensus        58 ~~c~--~c~~~f~~~~~l~~h~~~~   80 (150)
                      |.|+  .|++.|.....|..|+++|
T Consensus         3 ~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            3 YVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             EEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCcCCcCcCccCCHHHHHHHHHHh
Confidence            4444  4444444444444444444

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.72  E-value=8.4e-05  Score=36.88  Aligned_cols=25  Identities=20%  Similarity=0.404  Sum_probs=14.6

Q ss_pred             CcCCc--chhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCP--YCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~--~C~~~f~~~~~l~~H~~~~~  139 (150)
                      +|.|.  .|++.+.....|..|+++.|
T Consensus        38 ~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A           38 PLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCEeeCCCCcCCCCChHHHHhhccccC
Confidence            45564  46666655566666665543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.57  E-value=0.00026  Score=35.07  Aligned_cols=46  Identities=28%  Similarity=0.507  Sum_probs=26.5

Q ss_pred             cccccccCHHHHHHHHHHHhhCCC-----cceecc--cccccccChHHHHHHH
Q psy12196          5 PCDVLFHNKATLYKHLYLEHKATS-----LSIQCN--MCSLVLDSKESLVTHI   50 (150)
Q Consensus         5 ~C~~~f~~~~~l~~h~~~~~~~~~-----~~~~c~--~c~~~f~~~~~l~~h~   50 (150)
                      .|++.|.+...|..|+...|....     ..|.|.  .|+..+.....|..|+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hi   60 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHI   60 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhc
Confidence            377777777777777643343121     145554  5666655555666665

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.06  E-value=5.6e-05  Score=42.40  Aligned_cols=24  Identities=29%  Similarity=0.447  Sum_probs=15.4

Q ss_pred             CcCCcchhhhccCchHHHHHHHHh
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      +|.|..|++.|.+.+.|..|+++.
T Consensus        50 pfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           50 LHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ceEcccCcchhCCHHHHHHHHhhh
Confidence            666666666666666666665443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.99  E-value=0.00069  Score=30.80  Aligned_cols=29  Identities=21%  Similarity=0.349  Sum_probs=23.8

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      .|.|+.|+..|.....|..||+..-++..
T Consensus        12 ~~~CPrCn~~f~~~~sLr~HmkycCp~~v   40 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCYCCPEMV   40 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred             ceeCCcccccccchHHHHhhhhhcCcchh
Confidence            77899999999999999999986655544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.93  E-value=0.00015  Score=40.64  Aligned_cols=27  Identities=22%  Similarity=0.267  Sum_probs=15.3

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHh
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKF  106 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~  106 (150)
                      ++|+++|.|..|++.|...+.|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            445555556556666655555555543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.87  E-value=0.00093  Score=30.37  Aligned_cols=22  Identities=23%  Similarity=0.505  Sum_probs=18.7

Q ss_pred             CCCCcccccccCHHHHHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYL   22 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~   22 (150)
                      |.|+.|+..|+-...|+.||+.
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhhh
Confidence            5788999999999999999865

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=96.86  E-value=0.00063  Score=28.93  Aligned_cols=28  Identities=25%  Similarity=0.591  Sum_probs=24.3

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      .|.||.|.+.|.+...|..|....|.+.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4889999999999999999998888543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.74  E-value=0.0013  Score=37.34  Aligned_cols=76  Identities=16%  Similarity=0.318  Sum_probs=47.8

Q ss_pred             cccccCCCCcccCChHHHHHHH--HhhcCC-CcccCCC------ChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhcc
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHV--KMEHNS-KSYQCNE------CPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFS  126 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~--~~~~~~-~~~~c~~------c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~  126 (150)
                      .++.|..|+..|.+...+..|.  +.|... +.+.+..      -+..+...    .+......  ...|-|..|++.|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGE--DRSKCCPVCNMTFS  104 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCC--CTTTEETTTTEECS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCC--CCCeEcCCCCCEeC
Confidence            6789999999999999999998  444321 1121100      01111111    01111222  33788999999999


Q ss_pred             CchHHHHHHHH
Q psy12196        127 EDKNLIQHIVS  137 (150)
Q Consensus       127 ~~~~l~~H~~~  137 (150)
                      +...|..|+..
T Consensus       105 s~~~~~~H~~g  115 (127)
T 1zu1_A          105 SPVVAESHYIG  115 (127)
T ss_dssp             SHHHHHHHHTS
T ss_pred             CHHHHHHHHCC
Confidence            99999999854

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.58  E-value=0.0016  Score=38.79  Aligned_cols=104  Identities=18%  Similarity=0.321  Sum_probs=63.6

Q ss_pred             ecccccccccChH-----HHHHHHhccCCcccccC--CCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhH
Q psy12196         32 QCNMCSLVLDSKE-----SLVTHISQTHTLMFTCR--RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRH  104 (150)
Q Consensus        32 ~c~~c~~~f~~~~-----~l~~h~~~~~~~~~~c~--~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h  104 (150)
                      .|+.|...+....     .+...+   ......|+  -|+.... ...+..|... -.-.+..|..|+..+ ....|..|
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i---~~l~v~C~n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H  128 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREI---LSLMVKCPNEGCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIH  128 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHH---HTSEEECCSTTCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHH---hhcccCCCCCCCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHHHH
Confidence            7999987765421     122222   12344563  4665554 3456677632 234567899998877 45578888


Q ss_pred             HhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196        105 KFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus       105 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      ....-..+  +..|+.|+..+.. ..|..|...+.|+.++
T Consensus       129 ~~~~C~~r--~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          129 ILKDCPRR--QVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             HHHTCTTC--EEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             hhhhCCCC--CeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            75433444  5679999988866 5789999998888765

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.76  E-value=0.045  Score=30.95  Aligned_cols=75  Identities=20%  Similarity=0.298  Sum_probs=45.1

Q ss_pred             CcceecccccccccChHHHHHHHh-ccCC---cccccC------CCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcc
Q psy12196         28 SLSIQCNMCSLVLDSKESLVTHIS-QTHT---LMFTCR------RCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFER   97 (150)
Q Consensus        28 ~~~~~c~~c~~~f~~~~~l~~h~~-~~~~---~~~~c~------~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~   97 (150)
                      ..++.|..|...|.+.+.+..|.. ..|.   +.+.+.      .-+..+....    +.....+...|.|.+|+..|..
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            455789999998888888888852 2222   111110      0111221110    1123456677889999999999


Q ss_pred             hhHHhhHHh
Q psy12196         98 LNKLKRHKF  106 (150)
Q Consensus        98 ~~~l~~h~~  106 (150)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            988888854

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.45  E-value=0.013  Score=24.83  Aligned_cols=25  Identities=24%  Similarity=0.450  Sum_probs=17.2

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHK   25 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~   25 (150)
                      |.|+.|.+.|.+...|..|....|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            4577777777777777777666554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.88  E-value=0.041  Score=32.66  Aligned_cols=20  Identities=30%  Similarity=0.735  Sum_probs=9.0

Q ss_pred             CCcchhhhccCchHHHHHHHH
Q psy12196        117 QCPYCITDFSEDKNLIQHIVS  137 (150)
Q Consensus       117 ~C~~C~~~f~~~~~l~~H~~~  137 (150)
                      .|+.|+..+ ....|..|+..
T Consensus       112 ~C~~C~~~~-~r~~l~~H~~~  131 (170)
T 3hcs_A          112 DCPQCQRPF-QKFHINIHILK  131 (170)
T ss_dssp             ECTTTCCEE-EGGGHHHHHHH
T ss_pred             ECCCCChHH-HHHHHHHHhhh
Confidence            455554444 23344555443

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=92.77  E-value=0.038  Score=28.82  Aligned_cols=26  Identities=27%  Similarity=0.457  Sum_probs=21.0

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      ...|.+||+.|..   |.+|+.++||-.|
T Consensus        21 ~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           21 HIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             CEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             ceEecccchhhHH---HHHHHHHccCCCH
Confidence            4579999999884   7799999877655

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=92.52  E-value=0.026  Score=25.75  Aligned_cols=35  Identities=20%  Similarity=0.489  Sum_probs=17.2

Q ss_pred             cccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhh
Q psy12196         85 SYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  123 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~  123 (150)
                      .|+|.+||..+.....-.    +.-.+-+-.|.|+.|+-
T Consensus         4 ~y~C~vCGyvyd~~~Gd~----t~f~~lP~dw~CP~Cg~   38 (46)
T 6rxn_A            4 KYVCNVCGYEYDPAEHDN----VPFDQLPDDWCCPVCGV   38 (46)
T ss_dssp             CEEETTTCCEECGGGGTT----CCGGGSCTTCBCTTTCC
T ss_pred             EEECCCCCeEEeCCcCCC----cchhhCCCCCcCcCCCC
Confidence            467777776665321110    11112222567888873

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=92.27  E-value=0.093  Score=22.36  Aligned_cols=21  Identities=29%  Similarity=0.586  Sum_probs=17.3

Q ss_pred             CCCcccccccCHHHHHHHHHH
Q psy12196          2 SCVPCDVLFHNKATLYKHLYL   22 (150)
Q Consensus         2 ~C~~C~~~f~~~~~l~~h~~~   22 (150)
                      .|..|+..|+....+..|.+.
T Consensus        10 ~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A           10 YCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHHH
T ss_pred             eeccccceehhhHHHhhhhee
Confidence            488899999999999988654

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=92.02  E-value=0.093  Score=21.12  Aligned_cols=21  Identities=24%  Similarity=0.444  Sum_probs=15.1

Q ss_pred             CCCCcccccccCHHHHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHLY   21 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~   21 (150)
                      |+|+.|.....+...|..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            457777777777777777753

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.47  E-value=0.14  Score=26.08  Aligned_cols=27  Identities=26%  Similarity=0.429  Sum_probs=20.8

Q ss_pred             CcCCcchhhhcc-------CchHHHHHHHHhcCC
Q psy12196        115 QIQCPYCITDFS-------EDKNLIQHIVSVHLG  141 (150)
Q Consensus       115 ~~~C~~C~~~f~-------~~~~l~~H~~~~~~~  141 (150)
                      .-.|..|++.+.       .-+.|.+|++..|.+
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            457888888886       357899999988843

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=89.97  E-value=0.12  Score=26.44  Aligned_cols=48  Identities=27%  Similarity=0.583  Sum_probs=26.0

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHH
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHK  105 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~  105 (150)
                      ..|.|..|+..+.- ..+..|...-.+...+.|-.|+..|.. ..++.|-
T Consensus         9 V~F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A            9 VFFTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             CEEEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             eEEEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            44566666655433 244555555444445666666666664 2344453

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=89.65  E-value=0.15  Score=22.32  Aligned_cols=25  Identities=16%  Similarity=0.250  Sum_probs=19.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      .+.|+.|++.+.. ..+..|.-.|-+
T Consensus         9 ~~~C~~C~~~i~~-~~~~EH~D~H~A   33 (39)
T 2i5o_A            9 QVPCEKCGSLVPV-WDMPEHMDYHFA   33 (39)
T ss_dssp             EEECTTTCCEEEG-GGHHHHHHHHHH
T ss_pred             CcccccccCcCCc-ccccchhhHHHH
Confidence            6789999999887 567888877643

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=89.04  E-value=0.31  Score=24.88  Aligned_cols=19  Identities=26%  Similarity=0.641  Sum_probs=13.3

Q ss_pred             eecccccccccChHHHHHHH
Q psy12196         31 IQCNMCSLVLDSKESLVTHI   50 (150)
Q Consensus        31 ~~c~~c~~~f~~~~~l~~h~   50 (150)
                      .+||.||.... +..|+..+
T Consensus         9 ~~~PlCG~~L~-W~eLIeQM   27 (95)
T 2k5c_A            9 AKCPICGSPLK-WEELIEEM   27 (95)
T ss_dssp             EECSSSCCEEC-HHHHHHHS
T ss_pred             ccCCcCCCccC-HHHHHHHH
Confidence            57999998765 55666554

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=88.88  E-value=0.22  Score=26.93  Aligned_cols=12  Identities=42%  Similarity=0.808  Sum_probs=6.9

Q ss_pred             CcccCCCChhhh
Q psy12196         84 KSYQCNECPESF   95 (150)
Q Consensus        84 ~~~~c~~c~~~~   95 (150)
                      .|+.|..||..|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            345666666555

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=88.74  E-value=0.4  Score=22.44  Aligned_cols=47  Identities=30%  Similarity=0.600  Sum_probs=30.8

Q ss_pred             cCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhh-ccCchHHHHHHHHh
Q psy12196         87 QCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITD-FSEDKNLIQHIVSV  138 (150)
Q Consensus        87 ~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~-f~~~~~l~~H~~~~  138 (150)
                      .|.+|.....+...|..|.......     +||.|-.. -.+.++|+.|+++.
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g-----qCPYC~~~~e~tesAlQaHfkvC   52 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING-----QCPYCMTITEATESALQAHYSIC   52 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT-----BCTTTCCBCCSSHHHHHHHHTTC
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC-----CCCcccCcCCcCHHHHHHHHHHh
Confidence            5777777777777788887654432     35656533 34678888887653

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=86.14  E-value=0.64  Score=19.08  Aligned_cols=20  Identities=25%  Similarity=0.482  Sum_probs=15.5

Q ss_pred             CCcccccccCHHHHHHHHHH
Q psy12196          3 CVPCDVLFHNKATLYKHLYL   22 (150)
Q Consensus         3 C~~C~~~f~~~~~l~~h~~~   22 (150)
                      |..|.+.+++..+|..|++.
T Consensus        12 crfckkkysdvknlikhire   31 (37)
T 2elu_A           12 CRFCKKKYSDVKNLIKHIRD   31 (37)
T ss_dssp             ETTTTEECSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            67788888888888888765

>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A

Probab=86.03  E-value=0.14  Score=24.01  Aligned_cols=39  Identities=18%  Similarity=0.365  Sum_probs=18.4

Q ss_pred             cccCCCChhhhcchhHHhhH---HhhhcCCCCCCcCCcchhh
Q psy12196         85 SYQCNECPESFERLNKLKRH---KFQAHNDSVHQIQCPYCIT  123 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h---~~~~~~~~~~~~~C~~C~~  123 (150)
                      .|+|.+||..+.-...-...   ..+.-.+-+-.|.|+.|+-
T Consensus         3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~   44 (52)
T 1e8j_A            3 IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGA   44 (52)
T ss_dssp             CEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCC
T ss_pred             cEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCC
Confidence            47788887766532211000   0011112233578888874

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=84.96  E-value=1.3  Score=23.83  Aligned_cols=29  Identities=21%  Similarity=0.445  Sum_probs=22.4

Q ss_pred             CcCCc---chhhhccCchHHHHHHHHhcCCCC
Q psy12196        115 QIQCP---YCITDFSEDKNLIQHIVSVHLGKE  143 (150)
Q Consensus       115 ~~~C~---~C~~~f~~~~~l~~H~~~~~~~~~  143 (150)
                      -|.|+   .|.++|.+..+|+.|....|....
T Consensus        58 if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~   89 (101)
T 3vk6_A           58 LFMCSIVQGCKRTYLSQRDLQAHINHRHMRAG   89 (101)
T ss_dssp             CCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSC
T ss_pred             EEECCCCCCHHHHhcCHHHHHHHHHHHhhhcC
Confidence            67776   588999999999999877774433

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=84.93  E-value=0.52  Score=28.94  Aligned_cols=25  Identities=20%  Similarity=0.349  Sum_probs=22.0

Q ss_pred             CcCCcchhhhccC-chHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSE-DKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~-~~~l~~H~~~~~  139 (150)
                      +.+|..|++.|.+ ...|..|+..+-
T Consensus       169 ~L~C~~C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          169 DLKCWRCGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             CCBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred             CceeCCCCchhhcccHHHHHHHHHHH
Confidence            8899999999987 899999997763

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=83.64  E-value=0.34  Score=29.74  Aligned_cols=25  Identities=24%  Similarity=0.535  Sum_probs=17.6

Q ss_pred             CcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhh
Q psy12196         84 KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  123 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~  123 (150)
                      ..|.|.+||..+..             +.  |+.||.|+-
T Consensus       170 ~~~~C~~CG~i~~g-------------~~--p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHKG-------------ED--FEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEES-------------SC--CSBCTTTCC
T ss_pred             cEEEECCCCCEEcC-------------cC--CCCCCCCCC
Confidence            45889999876541             22  788998874

>1wvk_A AT2G23090/F21P24.15; structural genomics, protein structure initiative, cell free, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: g.82.1.1

Probab=83.45  E-value=0.38  Score=25.07  Aligned_cols=30  Identities=20%  Similarity=0.345  Sum_probs=23.4

Q ss_pred             CcCCcchhh---hccCchHHHHHHHHhcCCCCC
Q psy12196        115 QIQCPYCIT---DFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus       115 ~~~C~~C~~---~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      .++|++|..   ...+...|..|..+.|+..++
T Consensus        45 ~i~C~VCr~tFm~t~~~~~L~~H~e~KHpK~~~   77 (86)
T 1wvk_A           45 SIQCKVCMQTFICTTSEVKCREHAEAKHPKADV   77 (86)
T ss_dssp             CEEETTTTEEECCSSCSHHHHHHHHTCCSCCGG
T ss_pred             CCCChHhHhhHHhcCChHHHHHHHHcCCCCCCH
Confidence            678999988   445678899999988877754

>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...

Probab=81.40  E-value=0.54  Score=24.37  Aligned_cols=29  Identities=21%  Similarity=0.437  Sum_probs=15.5

Q ss_pred             ceecccccccccChHHHHHHHhccCCcccccCCCCccc
Q psy12196         30 SIQCNMCSLVLDSKESLVTHISQTHTLMFTCRRCPSTF   67 (150)
Q Consensus        30 ~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~c~~c~~~f   67 (150)
                      .|.|+.|+....         .......+.|+.|+..|
T Consensus        27 ~y~Cp~CG~~~v---------~r~atGiW~C~~Cg~~~   55 (83)
T 1vq8_Z           27 DHACPNCGEDRV---------DRQGTGIWQCSYCDYKF   55 (83)
T ss_dssp             CEECSSSCCEEE---------EEEETTEEEETTTCCEE
T ss_pred             cCcCCCCCCcce---------eccCCCeEECCCCCCEe
Confidence            367777776321         12223456677776654

>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}

Probab=80.68  E-value=0.29  Score=25.24  Aligned_cols=40  Identities=18%  Similarity=0.390  Sum_probs=19.3

Q ss_pred             CcccCCCChhhhcchhHHhhH---HhhhcCCCCCCcCCcchhh
Q psy12196         84 KSYQCNECPESFERLNKLKRH---KFQAHNDSVHQIQCPYCIT  123 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h---~~~~~~~~~~~~~C~~C~~  123 (150)
                      ..|+|.+||..+.-...-...   ..+.-.+.+-.|.|+.|+-
T Consensus        26 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga   68 (81)
T 2kn9_A           26 KLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGA   68 (81)
T ss_dssp             CEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCC
T ss_pred             ceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCC
Confidence            347888888766542211000   0011122233578888874

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=80.66  E-value=0.91  Score=25.38  Aligned_cols=26  Identities=19%  Similarity=0.409  Sum_probs=17.8

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      +..|--|...|.+...+..|++..|+
T Consensus        15 ~~~CLFCd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           15 HTPCLFCDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred             ceeEecCCCcccCHHHHHHHHHHhcC
Confidence            56677777777777777777766664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	150
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.76
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.73
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.46
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.45
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.41
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.4
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.39
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.38
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.38
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.38
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.36
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.33
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.32
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.31
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.29
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.27
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.25
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.25
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.24
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.21
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.19
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.18
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.18
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.16
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.16
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.13
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.13
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.1
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.05
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.01
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.97
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.88
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.86
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.83
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.82
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.77
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.71
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.61
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.58
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.57
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.47
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.47
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.41
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.37
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.34
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.31
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.25
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.25
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.19
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	98.16
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.15
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.06
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.05
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.03
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.99
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.95
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.94
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.89
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.72
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.71
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.68
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.66
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.65
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.58
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.55
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.5
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.48
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.48
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.47
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.43
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.42
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.4
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.35
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.35
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.26
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.21
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.16
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.15
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.13
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	97.06
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	97.04
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.03
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.99
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	96.97
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.93
d1y0jb1	36	U-shaped transcription factor, different fingers {	96.9
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.8
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.74
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.64
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.61
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.59
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.58
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.56
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.55
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	96.51
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.51
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.45
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.36
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.06
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.03
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.71
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.5
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.99
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	94.36
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	93.96
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	93.95
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	93.35
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.05
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	92.27
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.17
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.88
d1fu9a_	36	U-shaped transcription factor, different fingers {	91.6
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	91.56
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.49
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	89.9
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	89.39
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.92
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	87.25

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.5e-19  Score=86.76  Aligned_cols=53  Identities=25%  Similarity=0.453  Sum_probs=36.4

Q ss_pred             CCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHh
Q psy12196         83 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus        83 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      |+||.| .||+.|.....|..|+++|++++  ||.|++|+++|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ek--py~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLR--PYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCC--SEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhcccccc--CCcCCCcCCEecCHHHHHHHHhcC
Confidence            466777 37777777777777777776666  677777777777777777776554

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.9e-18  Score=82.75  Aligned_cols=53  Identities=21%  Similarity=0.538  Sum_probs=49.9

Q ss_pred             CcccccCCCCcccCChHHHHHHHHhhcCCCcccCCCChhhhcchhHHhhHHhhh
Q psy12196         55 TLMFTCRRCPSTFLNSATLSKHVKMEHNSKSYQCNECPESFERLNKLKRHKFQA  108 (150)
Q Consensus        55 ~~~~~c~~c~~~f~~~~~l~~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~  108 (150)
                      ++||.| .||++|.....|..|+++|+|++||.|.+||+.|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            478999 59999999999999999999999999999999999999999998765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.4e-15  Score=65.60  Aligned_cols=37  Identities=22%  Similarity=0.384  Sum_probs=28.6

Q ss_pred             hHHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        103 RHKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       103 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +|+.+|++++  ||.|++||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ek--py~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERR--RYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSC--SSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCC--CEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3666677776  888888888888888888888888775

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.3e-14  Score=63.63  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=28.1

Q ss_pred             CCcCCcchhhhccCchHHHHHHH-HhcCCCCCCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIV-SVHLGKEGTAP  147 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~~~  147 (150)
                      +||+|.+||++|...++|.+|++ +|++|+||.|.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            48888888888888888888875 58888888875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.7e-14  Score=59.76  Aligned_cols=32  Identities=22%  Similarity=0.261  Sum_probs=22.0

Q ss_pred             hcCCCCCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        108 AHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       108 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      |++++  ||+|.+|+++|...++|..|+++|+||
T Consensus         2 HTgek--py~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEK--PYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCC--CEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCC--CeeCCCCCCEeCchHHhHhhccccCCC
Confidence            45555  777777777777777777777777665

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.40  E-value=5.9e-14  Score=57.51  Aligned_cols=29  Identities=24%  Similarity=0.442  Sum_probs=26.1

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +||+|++|+++|...+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            48999999999999999999999999885

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=7.6e-14  Score=58.79  Aligned_cols=33  Identities=27%  Similarity=0.566  Sum_probs=28.2

Q ss_pred             hhcCCCcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         79 MEHNSKSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        79 ~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      +|+|++||.|.+||+.|...+.|..|+++|++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            478888888888888888888888888888775

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=7.5e-14  Score=60.38  Aligned_cols=33  Identities=18%  Similarity=0.300  Sum_probs=23.9

Q ss_pred             hhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        107 QAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       107 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +|++++  ||+|.+|+++|...+.|..|+++|+++
T Consensus         2 ~HTgek--Py~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEK--PYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCC--CEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCC--CEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            456666  777777777777777777777777654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.4e-13  Score=56.28  Aligned_cols=29  Identities=28%  Similarity=0.552  Sum_probs=26.3

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +||.|++|+++|...++|.+|+++|++|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            48999999999999999999999999885

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.7e-14  Score=63.30  Aligned_cols=37  Identities=22%  Similarity=0.567  Sum_probs=31.3

Q ss_pred             HHHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         75 KHVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        75 ~h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      +|+.+|++++||.|.+||+.|...++|..|+++|++|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3677888889999999999999999999998888775

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.9e-13  Score=59.21  Aligned_cols=34  Identities=21%  Similarity=0.591  Sum_probs=18.6

Q ss_pred             cccccCCCCcccCChHHHHHHHH-hhcCCCcccCC
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVK-MEHNSKSYQCN   89 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~-~~~~~~~~~c~   89 (150)
                      +||.|.+||+.|.....|..|++ +|++++||.|.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            45555555555555555555543 45555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.33  E-value=1.8e-13  Score=55.34  Aligned_cols=27  Identities=30%  Similarity=0.593  Sum_probs=23.8

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      +||+|++|+++|...++|.+|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            489999999999999999999998875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=2.9e-13  Score=58.50  Aligned_cols=34  Identities=24%  Similarity=0.537  Sum_probs=29.8

Q ss_pred             HhhcCCCcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         78 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        78 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      ++|+|++||.|.+||+.|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4688999999999999999999999999888765

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3.7e-13  Score=58.04  Aligned_cols=34  Identities=18%  Similarity=0.443  Sum_probs=25.9

Q ss_pred             hhcCCCCCCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        107 QAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       107 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +|++++  ||+|+.|+++|...++|.+|++.+|+++
T Consensus         2 ~HTgek--P~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           2 THSGEK--PYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCSCCC--SEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             ccCCCC--CEeCCCCcccccchHHHHHHcccccCCC
Confidence            466666  8888888888888888888877777654

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=4e-13  Score=58.44  Aligned_cols=34  Identities=24%  Similarity=0.323  Sum_probs=23.0

Q ss_pred             HHhhhcCCCCCCcCCcchhhhccCchHHHHHHHHhc
Q psy12196        104 HKFQAHNDSVHQIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       104 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      |.++|++++  ||+|++|+++|...++|.+|+++|.
T Consensus         2 h~R~HTgeK--Py~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIK--PFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSS--SBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCcc--CeEeCCCCCEecCHHHHHHHHhcCc
Confidence            445666666  7777777777777777777776664

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=4.1e-13  Score=58.41  Aligned_cols=35  Identities=26%  Similarity=0.490  Sum_probs=30.4

Q ss_pred             HHHhhcCCCcccCCCChhhhcchhHHhhHHhhhcC
Q psy12196         76 HVKMEHNSKSYQCNECPESFERLNKLKRHKFQAHN  110 (150)
Q Consensus        76 h~~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~  110 (150)
                      |.+.|+|++||.|.+|++.|...+.|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            46789999999999999999999999999887753

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=7.9e-13  Score=52.10  Aligned_cols=26  Identities=27%  Similarity=0.447  Sum_probs=22.0

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhc
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      +||+|.+|||+|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            48888888888888888888888874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.25  E-value=1.5e-12  Score=55.50  Aligned_cols=25  Identities=20%  Similarity=0.534  Sum_probs=13.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      ||+|++|++.|...++|.+|+++|+
T Consensus         7 Py~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           7 PFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             cccCCCCCCcccChHHHHHHccccC
Confidence            5555555555555555555555554

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.7e-12  Score=55.74  Aligned_cols=32  Identities=22%  Similarity=0.375  Sum_probs=27.1

Q ss_pred             cCCcc--hhhhccCchHHHHHHHHhcCCCCCCCC
Q psy12196        116 IQCPY--CITDFSEDKNLIQHIVSVHLGKEGTAP  147 (150)
Q Consensus       116 ~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~  147 (150)
                      |.|+.  |+++|...+.|.+|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            45654  999999999999999999999999885

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=2e-12  Score=55.10  Aligned_cols=32  Identities=16%  Similarity=0.365  Sum_probs=30.1

Q ss_pred             hcCCCcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         80 EHNSKSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        80 ~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      |+|++||.|.+|++.|...++|..|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999998775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=2.5e-12  Score=55.36  Aligned_cols=34  Identities=26%  Similarity=0.609  Sum_probs=28.4

Q ss_pred             HhhcCCCcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         78 KMEHNSKSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        78 ~~~~~~~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      ++|+|++||.|.+|++.|...++|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3688999999999999999999999997766554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.18  E-value=1.1e-11  Score=50.56  Aligned_cols=29  Identities=28%  Similarity=0.594  Sum_probs=18.0

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCCC
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNSK   84 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   84 (150)
                      +||.|++|+++|.....|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35666666666666666666666666653

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=5.6e-12  Score=51.70  Aligned_cols=28  Identities=25%  Similarity=0.456  Sum_probs=24.8

Q ss_pred             CCcCCcc--hhhhccCchHHHHHHHHhcCC
Q psy12196        114 HQIQCPY--CITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       114 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +||+|+.  |+++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4889987  999999999999999999886

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=1.2e-12  Score=59.79  Aligned_cols=40  Identities=18%  Similarity=0.417  Sum_probs=32.3

Q ss_pred             HHhhHHhhhcCCCCCCcCCcc--hhhhccCchHHHHHHHHhcCCC
Q psy12196        100 KLKRHKFQAHNDSVHQIQCPY--CITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       100 ~l~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      .|..|+ .+.+++  ||+|+.  |+++|...++|..|+++|+||+
T Consensus         6 ~l~~h~-~h~gek--py~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYV-KEMPDK--TFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSC-EEETTT--EEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchh-hccCCC--CeECCcCCCCccccCchHHHhhcccccCCC
Confidence            455565 477777  899976  9999999999999999999875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.7e-11  Score=49.91  Aligned_cols=29  Identities=45%  Similarity=0.868  Sum_probs=17.6

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcCCC
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHNSK   84 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~~~   84 (150)
                      +||.|++|+++|.....|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            35666666666666666666666666553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=8.5e-12  Score=51.24  Aligned_cols=28  Identities=32%  Similarity=0.471  Sum_probs=24.3

Q ss_pred             CCcCCcc--hhhhccCchHHHHHHHHhcCC
Q psy12196        114 HQIQCPY--CITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       114 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +||+|+.  |+++|...++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4888976  999999999999999999876

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=9.1e-12  Score=50.24  Aligned_cols=27  Identities=30%  Similarity=0.615  Sum_probs=14.1

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcC
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~   82 (150)
                      +||+|++|+++|..+..|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            455555555555555555555555543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.2e-11  Score=51.22  Aligned_cols=29  Identities=24%  Similarity=0.462  Sum_probs=24.4

Q ss_pred             CCcCCc--chhhhccCchHHHHHHHHhcCCC
Q psy12196        114 HQIQCP--YCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       114 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +||.|+  .|+++|...++|.+|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            378884  69999999999999999998875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=7.4e-11  Score=50.54  Aligned_cols=32  Identities=28%  Similarity=0.787  Sum_probs=22.8

Q ss_pred             cccCC--CCcccCChHHHHHHHHhhcCCCcccCC
Q psy12196         58 FTCRR--CPSTFLNSATLSKHVKMEHNSKSYQCN   89 (150)
Q Consensus        58 ~~c~~--c~~~f~~~~~l~~h~~~~~~~~~~~c~   89 (150)
                      |.|+.  |+++|.....|..|+++|+|++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            45554  777777777777777777777777765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=8.9e-11  Score=46.11  Aligned_cols=24  Identities=21%  Similarity=0.593  Sum_probs=12.2

Q ss_pred             ccccCCCCcccCChHHHHHHHHhh
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKME   80 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~   80 (150)
                      ||+|.+||++|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            445555555555555555555444

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=1.7e-11  Score=55.96  Aligned_cols=39  Identities=26%  Similarity=0.496  Sum_probs=29.9

Q ss_pred             HHHHHHhhcCCCcccCCC--ChhhhcchhHHhhHHhhhcCCC
Q psy12196         73 LSKHVKMEHNSKSYQCNE--CPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        73 l~~h~~~~~~~~~~~c~~--c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      +..|+ .|++++||.|.+  |++.|...+.|..|+++|++++
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34455 478888888876  8888888888888888888764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=1.6e-10  Score=46.87  Aligned_cols=27  Identities=30%  Similarity=0.507  Sum_probs=22.4

Q ss_pred             CCcCCcc--hhhhccCchHHHHHHHHhcC
Q psy12196        114 HQIQCPY--CITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       114 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~  140 (150)
                      +||+|+.  |+++|...++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3788866  88999998999999888875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=4.5e-10  Score=46.60  Aligned_cols=28  Identities=25%  Similarity=0.437  Sum_probs=23.6

Q ss_pred             CCcCCcc--hhhhccCchHHHHHHHHhcCC
Q psy12196        114 HQIQCPY--CITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       114 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +||.|+.  |+++|...++|.+|+++|+.+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            4888976  999999999999999888754

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=1.3e-09  Score=44.45  Aligned_cols=27  Identities=15%  Similarity=0.416  Sum_probs=16.2

Q ss_pred             ccccCC--CCcccCChHHHHHHHHhhcCC
Q psy12196         57 MFTCRR--CPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        57 ~~~c~~--c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      ||.|+.  |+++|.....|..|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            555655  666666666666666666553

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=5.4e-10  Score=44.74  Aligned_cols=26  Identities=31%  Similarity=0.750  Sum_probs=22.0

Q ss_pred             CCcCCcc--hhhhccCchHHHHHHHHhc
Q psy12196        114 HQIQCPY--CITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       114 ~~~~C~~--C~~~f~~~~~l~~H~~~~~  139 (150)
                      +||.|+.  |+|+|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3888876  9999999999999998874

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=1.7e-09  Score=44.21  Aligned_cols=27  Identities=26%  Similarity=0.526  Sum_probs=16.1

Q ss_pred             ccccCC--CCcccCChHHHHHHHHhhcCC
Q psy12196         57 MFTCRR--CPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        57 ~~~c~~--c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      ||.|+.  |+++|.....|..|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            555654  666666666666666666553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=3.3e-09  Score=43.70  Aligned_cols=28  Identities=29%  Similarity=0.575  Sum_probs=16.7

Q ss_pred             ccccC--CCCcccCChHHHHHHHHhhcCCC
Q psy12196         57 MFTCR--RCPSTFLNSATLSKHVKMEHNSK   84 (150)
Q Consensus        57 ~~~c~--~c~~~f~~~~~l~~h~~~~~~~~   84 (150)
                      ||.|+  .|+++|.....|..|+++|+|++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            55563  36666666666666666666553

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=1.1e-09  Score=43.89  Aligned_cols=30  Identities=27%  Similarity=0.299  Sum_probs=25.1

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      ...|..||++|.+.-.|.+|..+|.+|+||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            456888888888888888888888888887

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=4e-09  Score=39.33  Aligned_cols=26  Identities=23%  Similarity=0.336  Sum_probs=20.1

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      |.+|+.|++.|..+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45688888888888888888887764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.58  E-value=1.9e-08  Score=41.58  Aligned_cols=26  Identities=35%  Similarity=0.768  Sum_probs=14.0

Q ss_pred             CcccCCC--ChhhhcchhHHhhHHhhhc
Q psy12196         84 KSYQCNE--CPESFERLNKLKRHKFQAH  109 (150)
Q Consensus        84 ~~~~c~~--c~~~~~~~~~l~~h~~~~~  109 (150)
                      +||.|.+  |++.|...++|.+|+++|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4555554  5555555555555555544

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.57  E-value=1.5e-08  Score=40.87  Aligned_cols=26  Identities=27%  Similarity=0.706  Sum_probs=14.3

Q ss_pred             ccccCC--CCcccCChHHHHHHHHhhcC
Q psy12196         57 MFTCRR--CPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        57 ~~~c~~--c~~~f~~~~~l~~h~~~~~~   82 (150)
                      ||.|+.  |+++|.....|..|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            455544  55555555555555555543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=7.9e-09  Score=39.31  Aligned_cols=26  Identities=23%  Similarity=0.309  Sum_probs=19.5

Q ss_pred             cCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      ..|.+|||+|...+.|.+|+..|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            35777888888888888887777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=5.8e-08  Score=36.14  Aligned_cols=26  Identities=19%  Similarity=0.465  Sum_probs=17.2

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~   82 (150)
                      |.+|+.|++.|.....|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34666677777777777777666654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=1.8e-08  Score=40.18  Aligned_cols=24  Identities=29%  Similarity=0.627  Sum_probs=12.4

Q ss_pred             cccCCC--ChhhhcchhHHhhHHhhh
Q psy12196         85 SYQCNE--CPESFERLNKLKRHKFQA  108 (150)
Q Consensus        85 ~~~c~~--c~~~~~~~~~l~~h~~~~  108 (150)
                      ||.|.+  ||+.|...++|.+|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            455544  555555555555555444

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=4.5e-08  Score=38.25  Aligned_cols=26  Identities=23%  Similarity=0.588  Sum_probs=21.8

Q ss_pred             CcCCcc--hhhhccCchHHHHHHHHhcC
Q psy12196        115 QIQCPY--CITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       115 ~~~C~~--C~~~f~~~~~l~~H~~~~~~  140 (150)
                      ||.|..  |++++++.++|.+|++++||
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            677755  88999999999999998875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=3.9e-08  Score=37.55  Aligned_cols=28  Identities=18%  Similarity=0.284  Sum_probs=22.8

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +||+|..|..+-.+.+.|..|+++|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            4888888888888888888888888763

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1.1e-07  Score=37.10  Aligned_cols=28  Identities=21%  Similarity=0.419  Sum_probs=24.3

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +||.|++|...|..+.-+..|.++|.|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            4899999999999999899999988764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=8.9e-08  Score=36.84  Aligned_cols=25  Identities=16%  Similarity=0.349  Sum_probs=19.7

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHh
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      +||.|..||+.|.......+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4788888888888888888887766

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2e-07  Score=37.19  Aligned_cols=26  Identities=27%  Similarity=0.641  Sum_probs=12.3

Q ss_pred             cCCCChhhhcchhHHhhHHhhhcCCC
Q psy12196         87 QCNECPESFERLNKLKRHKFQAHNDS  112 (150)
Q Consensus        87 ~c~~c~~~~~~~~~l~~h~~~~~~~~  112 (150)
                      .|..||+.|.....|.+|...|++++
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ek   32 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEK   32 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCC
Confidence            44444444444444444444444444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=4.1e-07  Score=34.95  Aligned_cols=25  Identities=28%  Similarity=0.564  Sum_probs=15.5

Q ss_pred             cccccCCCCcccCChHHHHHHHHhh
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKME   80 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~   80 (150)
                      +||.|.+||+.|..+.....|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4566666666666666666666555

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=3.3e-07  Score=35.15  Aligned_cols=27  Identities=19%  Similarity=0.175  Sum_probs=21.3

Q ss_pred             cCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      |.|+.|+....-.+-|..|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888887763

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4.6e-07  Score=34.35  Aligned_cols=23  Identities=26%  Similarity=0.671  Sum_probs=11.2

Q ss_pred             cCCCCcccCChHHHHHHHHhhcC
Q psy12196         60 CRRCPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        60 c~~c~~~f~~~~~l~~h~~~~~~   82 (150)
                      |.+||++|..++.|.+|+.+|+|
T Consensus         5 c~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           5 CAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             CTTTCCEESSHHHHHHHGGGTSC
T ss_pred             HHHHhHHHHHHHHHHHHhhcccC
Confidence            44455555444444444444444

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=98.16  E-value=2.1e-07  Score=34.21  Aligned_cols=23  Identities=26%  Similarity=0.472  Sum_probs=19.9

Q ss_pred             cCCcchhhhccCchHHHHHHHHh
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            57889999999999999998776

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.15  E-value=8.2e-07  Score=33.14  Aligned_cols=26  Identities=27%  Similarity=0.364  Sum_probs=22.1

Q ss_pred             CCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        117 QCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       117 ~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +|+.|.+.|.++-.|..|-+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888888875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.06  E-value=8.3e-07  Score=37.25  Aligned_cols=29  Identities=17%  Similarity=0.459  Sum_probs=22.1

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      +.|.|..|++.|.+..+|-.|+..|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            36788888888888888888887775443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=2.4e-06  Score=32.85  Aligned_cols=28  Identities=32%  Similarity=0.551  Sum_probs=23.8

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      +||+|..|.....+.++|..|+++.|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            3888999998888899999999888864

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.6e-06  Score=33.12  Aligned_cols=27  Identities=22%  Similarity=0.469  Sum_probs=17.6

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcC
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~   82 (150)
                      +||.|++|...|..+.-+.-|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            466666666666666666666666655

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.2e-06  Score=32.59  Aligned_cols=27  Identities=30%  Similarity=0.573  Sum_probs=14.6

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhcC
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~~   82 (150)
                      +||+|..|..+..+++.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            355555555555555555555555554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=5.6e-06  Score=31.65  Aligned_cols=27  Identities=19%  Similarity=0.550  Sum_probs=19.9

Q ss_pred             cccCCCCcccCChHHHHHHHHhhcCCC
Q psy12196         58 FTCRRCPSTFLNSATLSKHVKMEHNSK   84 (150)
Q Consensus        58 ~~c~~c~~~f~~~~~l~~h~~~~~~~~   84 (150)
                      |.|+.|+....-++.|..|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            567777777777777777777777653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=1.6e-06  Score=32.74  Aligned_cols=26  Identities=15%  Similarity=0.312  Sum_probs=22.2

Q ss_pred             CCcCCcchhhhccCchHHHHHHHHhc
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      +||+|..|+.+-.+.++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            48889999999889999999988873

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.94  E-value=7.8e-06  Score=30.43  Aligned_cols=26  Identities=27%  Similarity=0.516  Sum_probs=21.2

Q ss_pred             ccCCCCcccCChHHHHHHHHhhcCCC
Q psy12196         59 TCRRCPSTFLNSATLSKHVKMEHNSK   84 (150)
Q Consensus        59 ~c~~c~~~f~~~~~l~~h~~~~~~~~   84 (150)
                      +|+.|.+.|.+...|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            58888888888888888888888764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=1.9e-06  Score=33.00  Aligned_cols=25  Identities=32%  Similarity=0.644  Sum_probs=20.1

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      ||.|..|..+|..+.+|..||++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            5778888888888888888887653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=9.1e-06  Score=31.14  Aligned_cols=27  Identities=30%  Similarity=0.594  Sum_probs=21.3

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      ||+|..|.......++|..|++..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CcccceecccccCcchHHHHHHHHccC
Confidence            788888888888888888888777653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=7.6e-06  Score=34.45  Aligned_cols=23  Identities=17%  Similarity=0.502  Sum_probs=15.4

Q ss_pred             CCcCCcchhhhccCchHHHHHHH
Q psy12196        114 HQIQCPYCITDFSEDKNLIQHIV  136 (150)
Q Consensus       114 ~~~~C~~C~~~f~~~~~l~~H~~  136 (150)
                      +||.|..|+|.|.+..++.+|..
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhhh
Confidence            36777777777777777766653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1e-05  Score=34.03  Aligned_cols=25  Identities=32%  Similarity=0.692  Sum_probs=22.9

Q ss_pred             cCCCcccCCCChhhhcchhHHhhHH
Q psy12196         81 HNSKSYQCNECPESFERLNKLKRHK  105 (150)
Q Consensus        81 ~~~~~~~c~~c~~~~~~~~~l~~h~  105 (150)
                      +|.+||.|.+|++.|-+...+.+|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            4789999999999999999999885

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.66  E-value=7.8e-06  Score=32.07  Aligned_cols=28  Identities=29%  Similarity=0.605  Sum_probs=16.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGK  142 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~  142 (150)
                      ||.|.+|++.|....-|.+|.+.-|++.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            4556666666666666666665555443

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=2.3e-05  Score=30.42  Aligned_cols=17  Identities=35%  Similarity=0.774  Sum_probs=7.8

Q ss_pred             CCcccCChHHHHHHHHh
Q psy12196         63 CPSTFLNSATLSKHVKM   79 (150)
Q Consensus        63 c~~~f~~~~~l~~h~~~   79 (150)
                      |++++..+++|..|++.
T Consensus        10 C~K~YtdPSSLRKH~k~   26 (29)
T d2glia5          10 CTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             TCCEESSHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHh
Confidence            44444444444444443

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=3.4e-05  Score=29.01  Aligned_cols=26  Identities=23%  Similarity=0.628  Sum_probs=16.4

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhc
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEH   81 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~   81 (150)
                      +|++|..|+.+...+++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            45666666666666666666666653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=4.2e-05  Score=29.09  Aligned_cols=27  Identities=30%  Similarity=0.561  Sum_probs=20.5

Q ss_pred             ccccCCCCcccCChHHHHHHHHhhcCC
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      -|.|+.|...|...-.|..|+..|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            467778888888888888888777764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.50  E-value=2.7e-05  Score=29.75  Aligned_cols=27  Identities=19%  Similarity=0.347  Sum_probs=21.8

Q ss_pred             CcCC--cchhhhccCchHHHHHHHHhcCC
Q psy12196        115 QIQC--PYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       115 ~~~C--~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      ||-|  ..|.|.|.+...|.+|..+|+||
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            4555  45999999999999999998875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=1e-05  Score=31.70  Aligned_cols=25  Identities=20%  Similarity=0.380  Sum_probs=18.3

Q ss_pred             CcCCcc--hhhhccCchHHHHHH-HHhc
Q psy12196        115 QIQCPY--CITDFSEDKNLIQHI-VSVH  139 (150)
Q Consensus       115 ~~~C~~--C~~~f~~~~~l~~H~-~~~~  139 (150)
                      ||.|..  |.|+|.+.++...|+ ++|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            677755  888888888888886 5553

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.48  E-value=4e-05  Score=32.00  Aligned_cols=28  Identities=29%  Similarity=0.545  Sum_probs=15.4

Q ss_pred             CcccCCCChhhhcchhHHhhHHhhhcCC
Q psy12196         84 KSYQCNECPESFERLNKLKRHKFQAHND  111 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~  111 (150)
                      +.|.|.+|++.|.+...|-.|+..|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            3455566666666555555555554433

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.47  E-value=2.3e-05  Score=28.64  Aligned_cols=22  Identities=27%  Similarity=0.732  Sum_probs=17.1

Q ss_pred             CcCCcchhhhccCchHHHHHHH
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIV  136 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~  136 (150)
                      ||+|..|...|..+.+|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6778888888888888887774

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=5.4e-05  Score=28.79  Aligned_cols=27  Identities=26%  Similarity=0.406  Sum_probs=22.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      .|.|..|...|...-.|.-||.+|+||
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            577888888888888888888888875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.42  E-value=4.6e-05  Score=27.81  Aligned_cols=22  Identities=36%  Similarity=0.720  Sum_probs=11.5

Q ss_pred             ccCCCChhhhcchhHHhhHHhh
Q psy12196         86 YQCNECPESFERLNKLKRHKFQ  107 (150)
Q Consensus        86 ~~c~~c~~~~~~~~~l~~h~~~  107 (150)
                      |+|..|.++|-..+.|.+|++.
T Consensus         1 ykcglcersfveksalsrhqrv   22 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRV   22 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             CcccchHHHHHHHHHHHHHHHh
Confidence            3455555555555555555544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.40  E-value=3.3e-05  Score=29.37  Aligned_cols=24  Identities=29%  Similarity=0.438  Sum_probs=16.5

Q ss_pred             CcCCc--chhhhccCchHHHHHHHHh
Q psy12196        115 QIQCP--YCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       115 ~~~C~--~C~~~f~~~~~l~~H~~~~  138 (150)
                      ||+|+  .|++.|...+-|.+|-++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            56665  3777777777777776655

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.35  E-value=9.2e-05  Score=28.11  Aligned_cols=24  Identities=25%  Similarity=0.609  Sum_probs=12.2

Q ss_pred             ccccCC--CCcccCChHHHHHHHHhh
Q psy12196         57 MFTCRR--CPSTFLNSATLSKHVKME   80 (150)
Q Consensus        57 ~~~c~~--c~~~f~~~~~l~~h~~~~   80 (150)
                      ||+|+.  |++.|..++-|.+|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            445544  555555555555554444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=4.5e-05  Score=28.57  Aligned_cols=23  Identities=26%  Similarity=0.628  Sum_probs=20.0

Q ss_pred             CcCCcchhhhccCchHHHHHHHH
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVS  137 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~  137 (150)
                      ||+|+.||+.+..+.+|..|-..
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68999999999999999988654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00021  Score=27.31  Aligned_cols=25  Identities=20%  Similarity=0.454  Sum_probs=22.3

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHK   25 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~   25 (150)
                      |+|.+|.....+.++|.-|++..|.
T Consensus         3 y~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           3 YQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             ccccccccccccchhhhhhhhcccc
Confidence            7899999999999999999988765

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.0001  Score=30.52  Aligned_cols=26  Identities=23%  Similarity=0.482  Sum_probs=20.3

Q ss_pred             CCcCC--cchhhhccCchHHHHHHHHhc
Q psy12196        114 HQIQC--PYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       114 ~~~~C--~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      +||.|  +.|+..|.+...|..|...|.
T Consensus         5 kPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           5 KPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CceecCCCCccccccchHHHHHhhhhhe
Confidence            48888  668888888888888877764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00019  Score=27.32  Aligned_cols=22  Identities=32%  Similarity=0.730  Sum_probs=11.0

Q ss_pred             cccCCCCcccCChHHHHHHHHh
Q psy12196         58 FTCRRCPSTFLNSATLSKHVKM   79 (150)
Q Consensus        58 ~~c~~c~~~f~~~~~l~~h~~~   79 (150)
                      |.|..|+..|....+|..||..
T Consensus         2 y~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHHS
T ss_pred             cccceeeeeEeeccchhHhhhh
Confidence            4455555555555555555443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=0.00026  Score=27.01  Aligned_cols=23  Identities=35%  Similarity=0.595  Sum_probs=11.1

Q ss_pred             ccccCCCCcccCChHHHHHHHHh
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVKM   79 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~~   79 (150)
                      ||+|..|.......++|..|+..
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHH
Confidence            44455554444444455444443

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.13  E-value=0.00012  Score=28.66  Aligned_cols=23  Identities=35%  Similarity=0.722  Sum_probs=12.3

Q ss_pred             cccCCCChhhhcchhHHhhHHhh
Q psy12196         85 SYQCNECPESFERLNKLKRHKFQ  107 (150)
Q Consensus        85 ~~~c~~c~~~~~~~~~l~~h~~~  107 (150)
                      ||.|.+|++.|....-|.+|.+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            35555555555555555555444

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00044  Score=26.31  Aligned_cols=25  Identities=20%  Similarity=0.470  Sum_probs=21.3

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHK   25 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~   25 (150)
                      |.|..||+.+.+...++.|++..|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            6799999999999999999887553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00015  Score=27.20  Aligned_cols=24  Identities=33%  Similarity=0.624  Sum_probs=19.2

Q ss_pred             CCCCcccccccCHHHHHHHHHHHh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEH   24 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~   24 (150)
                      |+|+.|+-....++.|..|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            578888888888888888876543

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.03  E-value=0.00023  Score=26.02  Aligned_cols=24  Identities=25%  Similarity=0.436  Sum_probs=18.8

Q ss_pred             CCCCcccccccCHHHHHHHHHHHh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEH   24 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~   24 (150)
                      |.|+.|-+-|..+.++..|.++.|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            568888888888888888877643

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=9e-05  Score=28.98  Aligned_cols=21  Identities=29%  Similarity=0.710  Sum_probs=10.3

Q ss_pred             ccccCC--CCcccCChHHHHHHH
Q psy12196         57 MFTCRR--CPSTFLNSATLSKHV   77 (150)
Q Consensus        57 ~~~c~~--c~~~f~~~~~l~~h~   77 (150)
                      ||.|..  |.++|.+.++...|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444443  555555555544444

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.97  E-value=8.6e-05  Score=29.82  Aligned_cols=29  Identities=24%  Similarity=0.494  Sum_probs=23.4

Q ss_pred             CCCcCCcchhhhccCchHHHHHHHHhcCC
Q psy12196        113 VHQIQCPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       113 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      ...|.|..|.+.++..+++-+|..+-|..
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            34788999999999999999998877644

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00014  Score=27.35  Aligned_cols=25  Identities=20%  Similarity=0.181  Sum_probs=18.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      |-+|++|..+..++.+|..|-++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4567888888888888877777663

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.90  E-value=0.00029  Score=27.85  Aligned_cols=20  Identities=35%  Similarity=0.843  Sum_probs=16.1

Q ss_pred             CCCCcccccccCHHHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHL   20 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~   20 (150)
                      |.|..||..|++.+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            56888888888888888875

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.80  E-value=0.00067  Score=25.27  Aligned_cols=22  Identities=23%  Similarity=0.638  Sum_probs=13.7

Q ss_pred             ccccCCCCcccCChHHHHHHHH
Q psy12196         57 MFTCRRCPSTFLNSATLSKHVK   78 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~~   78 (150)
                      ||+|+.||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4666666666666666665543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.00084  Score=29.15  Aligned_cols=24  Identities=25%  Similarity=0.512  Sum_probs=20.3

Q ss_pred             CCCCcccccccCHHHHHHHHHHHhh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEHK   25 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~~   25 (150)
                      |.|..||+.|.+...|++|... |+
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQ-HG   30 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQ-HG   30 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHH-HT
T ss_pred             eeccccccccCCHHHHhHhHHh-cC
Confidence            5789999999999999999777 44

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.0009  Score=26.68  Aligned_cols=26  Identities=15%  Similarity=0.355  Sum_probs=15.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHL  140 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~  140 (150)
                      .|.|..|+|.|+....+.+|-....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            45666666666666666666655544

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.00067  Score=28.02  Aligned_cols=26  Identities=27%  Similarity=0.636  Sum_probs=12.7

Q ss_pred             CCcccCCC--ChhhhcchhHHhhHHhhh
Q psy12196         83 SKSYQCNE--CPESFERLNKLKRHKFQA  108 (150)
Q Consensus        83 ~~~~~c~~--c~~~~~~~~~l~~h~~~~  108 (150)
                      ++||.|..  |+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            44555522  555555555555554433

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.59  E-value=0.00082  Score=25.54  Aligned_cols=20  Identities=20%  Similarity=0.408  Sum_probs=9.3

Q ss_pred             CCcccCChHHHHHHHHhhcC
Q psy12196         63 CPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        63 c~~~f~~~~~l~~h~~~~~~   82 (150)
                      |.+.|.+-..|.+|...|+|
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            44444444444444444443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.00054  Score=25.64  Aligned_cols=25  Identities=28%  Similarity=0.569  Sum_probs=19.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      .|+||.|+-....+++|..|++.-|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4678888888888888888887654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.56  E-value=0.0012  Score=23.94  Aligned_cols=20  Identities=30%  Similarity=0.650  Sum_probs=10.0

Q ss_pred             eecccccccccChHHHHHHH
Q psy12196         31 IQCNMCSLVLDSKESLVTHI   50 (150)
Q Consensus        31 ~~c~~c~~~f~~~~~l~~h~   50 (150)
                      |+|..|...|-++..|+.|+
T Consensus         3 ykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHH
Confidence            44555555555555554443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0012  Score=24.78  Aligned_cols=22  Identities=23%  Similarity=0.543  Sum_probs=13.4

Q ss_pred             ccCCCCcccCChHHHHHHHHhh
Q psy12196         59 TCRRCPSTFLNSATLSKHVKME   80 (150)
Q Consensus        59 ~c~~c~~~f~~~~~l~~h~~~~   80 (150)
                      +|++|.....+.+.|..|.++|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            5666666666666666665555

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.51  E-value=0.0011  Score=28.62  Aligned_cols=30  Identities=30%  Similarity=0.657  Sum_probs=26.5

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhcCCCCC
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVHLGKEG  144 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~  144 (150)
                      |..|+.|+-......+|.+|+..-|-.+|.
T Consensus        24 patcpic~avirqsrnlrrhlel~hf~kpg   53 (54)
T d1yuja_          24 PATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHTSCSCC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhccCC
Confidence            778999999999999999999988877764

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.00063  Score=27.47  Aligned_cols=24  Identities=17%  Similarity=0.239  Sum_probs=18.0

Q ss_pred             CcchhhhccCchHHHHHHHHhcCC
Q psy12196        118 CPYCITDFSEDKNLIQHIVSVHLG  141 (150)
Q Consensus       118 C~~C~~~f~~~~~l~~H~~~~~~~  141 (150)
                      |+.=++.|.....|..|+++|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444556688888888888888875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.45  E-value=0.0007  Score=24.69  Aligned_cols=24  Identities=29%  Similarity=0.958  Sum_probs=20.1

Q ss_pred             cCCcchhhhccCchHHHHHHHHhc
Q psy12196        116 IQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       116 ~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      |.|+.|-+.|+.+.++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            568889999999999998887765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.0011  Score=28.80  Aligned_cols=24  Identities=25%  Similarity=0.455  Sum_probs=21.0

Q ss_pred             CcCCcchhhhccCchHHHHHHHHh
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      -|.|..|+|.|++..-|..|-..|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            678999999999999999997766

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.003  Score=25.41  Aligned_cols=24  Identities=21%  Similarity=0.324  Sum_probs=17.5

Q ss_pred             cCCCCcccCChHHHHHHHHhhcCC
Q psy12196         60 CRRCPSTFLNSATLSKHVKMEHNS   83 (150)
Q Consensus        60 c~~c~~~f~~~~~l~~h~~~~~~~   83 (150)
                      |+.-++.|.....|..|++.|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333455688888888888888875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0014  Score=26.12  Aligned_cols=20  Identities=25%  Similarity=0.652  Sum_probs=12.2

Q ss_pred             CCCCcccccccCHHHHHHHH
Q psy12196          1 MSCVPCDVLFHNKATLYKHL   20 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~   20 (150)
                      |.|..|++.|.....+.+|.
T Consensus         5 fvcskcgktftrrntm~rha   24 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHA   24 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHh
Confidence            34666666666666666664

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0016  Score=24.47  Aligned_cols=19  Identities=16%  Similarity=0.417  Sum_probs=16.5

Q ss_pred             chhhhccCchHHHHHHHHh
Q psy12196        120 YCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       120 ~C~~~f~~~~~l~~H~~~~  138 (150)
                      .|+|.|.+.+++..|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            5889999999999999776

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.50  E-value=0.0055  Score=24.08  Aligned_cols=21  Identities=33%  Similarity=0.634  Sum_probs=15.6

Q ss_pred             ccccCCCCcccCChHHHHHHH
Q psy12196         57 MFTCRRCPSTFLNSATLSKHV   77 (150)
Q Consensus        57 ~~~c~~c~~~f~~~~~l~~h~   77 (150)
                      .|.|+-||..|.+.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            467777888888777777764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.99  E-value=0.013  Score=22.55  Aligned_cols=20  Identities=15%  Similarity=0.379  Sum_probs=9.9

Q ss_pred             CCcccCChHHHHHHHHhhcC
Q psy12196         63 CPSTFLNSATLSKHVKMEHN   82 (150)
Q Consensus        63 c~~~f~~~~~l~~h~~~~~~   82 (150)
                      |+-.|...+.|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            44444444555555555444

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.013  Score=27.25  Aligned_cols=24  Identities=29%  Similarity=0.605  Sum_probs=21.1

Q ss_pred             CCCCcccccccCHHHHHHHHHHHh
Q psy12196          1 MSCVPCDVLFHNKATLYKHLYLEH   24 (150)
Q Consensus         1 ~~C~~C~~~f~~~~~l~~h~~~~~   24 (150)
                      |+|.+|+..|-....|..|+..|.
T Consensus        19 yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          19 YQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeechhHHHHhhHHHHHHHHHhcc
Confidence            689999999999999999988853

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.96  E-value=0.017  Score=21.69  Aligned_cols=21  Identities=33%  Similarity=0.377  Sum_probs=17.3

Q ss_pred             cchhhhccCchHHHHHHHHhc
Q psy12196        119 PYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       119 ~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      +.|++.|.+...|..|.+-.|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            569999999999988887655

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.0028  Score=30.29  Aligned_cols=24  Identities=29%  Similarity=0.447  Sum_probs=19.1

Q ss_pred             CcCCcchhhhccCchHHHHHHHHh
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSV  138 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~  138 (150)
                      .|-|..|++.|.+...|..|+++.
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ksK   38 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRSK   38 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTCH
T ss_pred             EEecccccCccCCHHHHHHHHccc
Confidence            677888888888888888887544

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.35  E-value=0.0091  Score=27.74  Aligned_cols=25  Identities=20%  Similarity=0.413  Sum_probs=22.7

Q ss_pred             CcCCcchhhhccCchHHHHHHHHhc
Q psy12196        115 QIQCPYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       115 ~~~C~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      .|+|..|+-.|.....|..|+..|.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhcc
Confidence            6899999999999999999998886

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.05  E-value=0.088  Score=22.56  Aligned_cols=26  Identities=27%  Similarity=0.516  Sum_probs=15.4

Q ss_pred             cccccCCCCcccCChHHHHHHHHhhc
Q psy12196         56 LMFTCRRCPSTFLNSATLSKHVKMEH   81 (150)
Q Consensus        56 ~~~~c~~c~~~f~~~~~l~~h~~~~~   81 (150)
                      .|..|++|+-....+.+|..|+..-+
T Consensus        23 qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            45566666666666666666655443

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.27  E-value=0.061  Score=21.53  Aligned_cols=22  Identities=32%  Similarity=0.484  Sum_probs=11.6

Q ss_pred             ccCCCCcccCChHHHHHHHHhh
Q psy12196         59 TCRRCPSTFLNSATLSKHVKME   80 (150)
Q Consensus        59 ~c~~c~~~f~~~~~l~~h~~~~   80 (150)
                      .|-+|-+.|.++-++++|+...
T Consensus         5 tclecmrtfkssfsiwrhqvev   26 (41)
T d1wjpa3           5 TCLECMRTFKSSFSIWRHQVEV   26 (41)
T ss_dssp             EEGGGTEECSSHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHHhhhee
Confidence            4555555555555555555443

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.17  E-value=0.086  Score=19.29  Aligned_cols=18  Identities=22%  Similarity=0.342  Sum_probs=9.8

Q ss_pred             CCcccCChHHHHHHHHhh
Q psy12196         63 CPSTFLNSATLSKHVKME   80 (150)
Q Consensus        63 c~~~f~~~~~l~~h~~~~   80 (150)
                      |+++|...+.|..|+-.|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555555444

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.88  E-value=0.028  Score=23.09  Aligned_cols=26  Identities=23%  Similarity=0.531  Sum_probs=15.7

Q ss_pred             CCcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhh
Q psy12196         83 SKSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  123 (150)
Q Consensus        83 ~~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~  123 (150)
                      ++.|.|.+||...             .++.  |-+|+.|+.
T Consensus         3 ~~~~vC~vCGyi~-------------~g~~--Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPICGYIH-------------KGED--FEKCPICFR   28 (36)
T ss_dssp             CCEEECSSSCCEE-------------ESSC--CSBCTTTCC
T ss_pred             CCEEECCCCCCEe-------------eCCC--CCcCCCCCC
Confidence            3557788887532             2332  557888873

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.60  E-value=0.066  Score=21.50  Aligned_cols=20  Identities=30%  Similarity=0.647  Sum_probs=16.9

Q ss_pred             CCcccccccCHHHHHHHHHH
Q psy12196          3 CVPCDVLFHNKATLYKHLYL   22 (150)
Q Consensus         3 C~~C~~~f~~~~~l~~h~~~   22 (150)
                      |..|+..|+....+..|.+.
T Consensus        11 C~~CDI~Fn~~~T~~aHKk~   30 (36)
T d1fu9a_          11 CSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             ETTTTEECSSHHHHHHHHHH
T ss_pred             HhhCCceehhHHHHHHHHHh
Confidence            77899999999999998654

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.56  E-value=0.031  Score=23.15  Aligned_cols=25  Identities=28%  Similarity=0.632  Sum_probs=15.0

Q ss_pred             CcccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchhh
Q psy12196         84 KSYQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCIT  123 (150)
Q Consensus        84 ~~~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~  123 (150)
                      +.|.|.+||..+             .++.  |-.||.|+.
T Consensus         4 ~~~~C~vCG~i~-------------~g~~--P~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEA--PEYCPVCGA   28 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCC--CSBCTTTCC
T ss_pred             cEEECCCCCCEe-------------cCCC--CCcCCCCCC
Confidence            457788887642             2232  557888763

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.49  E-value=0.036  Score=26.28  Aligned_cols=20  Identities=25%  Similarity=0.650  Sum_probs=15.0

Q ss_pred             CCCcccccccCHHHHHHHHH
Q psy12196          2 SCVPCDVLFHNKATLYKHLY   21 (150)
Q Consensus         2 ~C~~C~~~f~~~~~l~~h~~   21 (150)
                      -|..|++.|.+...|..|++
T Consensus        17 YCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          17 RCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             EETTTTEECSSHHHHHHHTT
T ss_pred             ecccccCccCCHHHHHHHHc
Confidence            47778888888888877754

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.90  E-value=0.1  Score=24.23  Aligned_cols=12  Identities=33%  Similarity=0.847  Sum_probs=6.7

Q ss_pred             ceeccccccccc
Q psy12196         30 SIQCNMCSLVLD   41 (150)
Q Consensus        30 ~~~c~~c~~~f~   41 (150)
                      .|.|+.|+++|+
T Consensus        14 ~y~Cp~C~~~ys   25 (62)
T d1vd4a_          14 SFKCPVCSSTFT   25 (62)
T ss_dssp             EEECSSSCCEEE
T ss_pred             ceECCCCCCCcc
Confidence            455555555554

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=89.39  E-value=0.037  Score=23.98  Aligned_cols=33  Identities=21%  Similarity=0.478  Sum_probs=16.4

Q ss_pred             ccCCCChhhhcchhHHhhHHhhhcCCCCCCcCCcchh
Q psy12196         86 YQCNECPESFERLNKLKRHKFQAHNDSVHQIQCPYCI  122 (150)
Q Consensus        86 ~~c~~c~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~  122 (150)
                      |+|.+||..+.....=    .+.-.+-+..|.|++|+
T Consensus         4 y~C~~CgyiYd~~~Gd----gt~Fe~LP~dw~CP~C~   36 (45)
T d6rxna_           4 YVCNVCGYEYDPAEHD----NVPFDQLPDDWCCPVCG   36 (45)
T ss_dssp             EEETTTCCEECGGGGT----TCCGGGSCTTCBCTTTC
T ss_pred             eEeCCCCeEECcccCC----CCCHHHCCCCCCCcCCC
Confidence            6777777655432210    11112222367788887

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.92  E-value=0.13  Score=19.26  Aligned_cols=24  Identities=25%  Similarity=0.544  Sum_probs=17.9

Q ss_pred             cCC--cchhhhccCchHHHHHHHHhc
Q psy12196        116 IQC--PYCITDFSEDKNLIQHIVSVH  139 (150)
Q Consensus       116 ~~C--~~C~~~f~~~~~l~~H~~~~~  139 (150)
                      |.|  ..|+-.|+.+.++..|+..-|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            445  348888999999998886654

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.25  E-value=0.15  Score=20.27  Aligned_cols=25  Identities=20%  Similarity=0.444  Sum_probs=18.8

Q ss_pred             CCCcCCcchhhhccCchHHHHHHHH
Q psy12196        113 VHQIQCPYCITDFSEDKNLIQHIVS  137 (150)
Q Consensus       113 ~~~~~C~~C~~~f~~~~~l~~H~~~  137 (150)
                      ++-|.|+.|.|=..+...|.+|+..
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHh
Confidence            3467788888888888888888754