Psyllid ID: psy12199

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------
Protein Sequence
MFIALIQLLKAETLLSGEHSALSIDQVERSDDFKPPSSTLPRAQPKRLGDDDILLRKRPHKKKKARLLKEEVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIFWIS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccEEcccccccEccccHHHEHEccccccccccccccccEEEccccHHHHHEHcccccccccccHccccEEcccccHHEHEHccccccccccccccccEcccccHHHHHEHccccccccccccccccEccccHHHHHHHHccccccccccccEEcccccccEcccccHHHHHHHHHHccccccccccccccEEEEccccHHHHHHHccccccccccccccEEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHHccccccccccccccccccEccccHHHHHHHHcccccccEcccccEEccccHHHEHEHHcccccccccccccEEcccccHHEHEEEcccccccccccccccHccccEccccHHHHHHHHccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEEcccccccccccEcccccccEccccHHHHHHHHccccEEEccccccEEccccHHHEHEHEccccEcccccccEccccHHHHHHHHcccccccccccccccEcccccHHHHHHHEcccccccEcccccccEcccccEEEcc
Coil and Loop (DISEMBL)
MFIALIQLLKAEtllsgehsalsidqversddfkppsstlpraqpkrlgdddillrkrphkkKKARLLKEEVPVVMVRQAMVTCHTAvhqatpwqevpgsipsqamnptmltttrvgnislkiprceecdinfpskmrhtfhlqhhledpdlpvnfmheCRECGSQFADILKHSLETHLSFIHVqdnqlkcticnkenfknQLSLSIHMRYHENVREYECEICKkkfinkstlkehsvshmsvkpfkceicghYLSRASRLRAHLKAHSVVAsnnkvqnckkcfkccqvfpsneenLRKHFEKVhfdlefdeaHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKklkhsnltyggespvcepcnltfknEWQYLVHNravhelppepnsgagsvlqnnpypplrkakqhvkSVTCSVCEKafsskenckahytrqhgnkepkepksgeglpALEQLlkmkpytceicsktytvegsllthydmhsgefyqcdvcfkefrssvtlrnhtrrhdnfscdecsVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHintkhntdvtlkcQLCNVVVLIEEVIFWIS
Flexible Loop (DISEMBL)
MFIALIQLLKAETLLSGEHSALsidqversddfkppsstlpraqpkrlgdddillrkrphkkkkarllkeevpvVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVvasnnkvqncKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKafsskenckahytrqhgnkepkepksgeGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRnhtrrhdnfscdECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHIntkhntdvtlKCQLCNVVVLIEEVIFWIS
Low Complexity Region (SEG)
MFIALIQLLKAETLLSGEHSALSIDQVERSDDFKPPSSTLPRAQPKRLGDDDILLRKRPHKKKKARLLKEEVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIFWIS
Disordered region (IsUnstruct)
*FIALIQLLKAETLL***************************************************LLKEEVPVVMVRQAMVTCHTAVHQATPWQEVPG********PTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVH*******************************VTCSVCE**********************************EQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIFWI*
Disordered Region (DISOPRED)
MFIALIQLLKAETLLSGEHSALSIDQVER****K*****LPRAQPKRLGDDDILLRKRPHKKKKARLLKEEVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIFWI*
Disordered Region (DISEMBL)
MFIALIQLLKAETLLSGEHSALSIDQVERSDDFKPPSSTLPRAQPKRLGDDDILLRKRPHKKKKARLLKEEVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPL**********TCSVCEKAFSSKENCKA****************GEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIFWIS
Disordered Region (DISPRO)
MFIALIQLLKAETLLSGEHSALSIDQVERSDDFKPPSSTLPRAQPKRLGDDDILLRKRPHKKKKARLLKEEVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEV*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFIALIQLLKAETLLSGEHSALSIDQVERSDDFKPPSSTLPRAQPKRLGDDDILLRKRPHKKKKARLLKEEVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIFWIS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	597	2.2.26 [Sep-21-2011]
Q14588	700	Zinc finger protein 234 O	yes	N/A	0.835	0.712	0.248	7e-31
Q05481	1191	Zinc finger protein 91 OS	no	N/A	0.718	0.360	0.280	2e-30
P10076	861	Zinc finger protein 26 OS	no	N/A	0.731	0.507	0.265	5e-30
Q5MCW4	686	Zinc finger protein 569 O	no	N/A	0.658	0.572	0.288	1e-29
Q4V348	819	Zinc finger protein 658B	no	N/A	0.780	0.568	0.266	2e-29
Q80W31	679	Zinc finger protein 569 O	no	N/A	0.658	0.578	0.283	2e-29
Q5TYW1	1059	Zinc finger protein 658 O	no	N/A	0.780	0.440	0.264	3e-29
Q02386	682	Zinc finger protein 45 OS	no	N/A	0.619	0.542	0.281	4e-29
Q9HCG1	818	Zinc finger protein 160 O	no	N/A	0.802	0.585	0.262	7e-29
Q8NB50	900	Zinc finger protein 62 ho	no	N/A	0.731	0.485	0.268	1e-28

>sp|Q14588|ZN234_HUMAN Zinc finger protein 234 OS=Homo sapiens GN=ZNF234 PE=2 SV=3

 Score =  135 bits (341), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 150/603 (24%), Positives = 230/603 (38%), Gaps = 104/603 (17%)

Query: 52  DILLRKRPHKKKKARLLKEEVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMN--PT 109
           DI+      K K A  ++ EV  V             H+   W ++   I S  +    +
Sbjct: 66  DIMKTATQRKGKSADKIQSEVETVP--------EAGRHEELYWGQIWKQIASDLIKYEDS 117

Query: 110 MLTTTRV---GNISLKIP-------------RCEECDINFPSKMRHTFHLQHHLEDPDLP 153
           M++ +R    G++S ++              +C+E   +F        H Q H  +    
Sbjct: 118 MISISRFPRQGDLSCQVRAGLYTTHTGQKFYQCDEYKKSFTDVFNFDLHQQLHSGEKS-- 175

Query: 154 VNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKE---------------- 197
               H C ECG  F  I   +L  H   +H+ +   KC +C KE                
Sbjct: 176 ----HTCDECGKSFCYIS--ALHIHQR-VHMGEKCYKCDVCGKEFSQSSHLQTHQRVHTV 228

Query: 198 -----------NFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPF 246
                       F  + +L++H + H   + Y CE C + FI+ S L+EH   H   KPF
Sbjct: 229 EKPFKCVECGKGFSRRSTLTVHCKLHSGEKPYNCEECGRAFIHASHLQEHQRIHTGEKPF 288

Query: 247 KCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHF 306
           KC+ CG    R S L  H   H+      K ++C KCF C         NLR H ++VH 
Sbjct: 289 KCDTCGKNFRRRSALNNHCMVHT-GEKPYKCEDCGKCFTC-------SSNLRIH-QRVHT 339

Query: 307 DLEFDEAHFYDVVLKCVYRFRIVQY----------FLCELCDKTSIHYTYLCLHKKLKHS 356
               ++ +  +   KC  +    Q           ++C++C K  I+ +    H+ +   
Sbjct: 340 G---EKPYKCEECGKCFIQPSQFQAHRRIHTGEKPYVCKVCGKGFIYSSSFQAHQGV--- 393

Query: 357 NLTYGGESPV-CEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLR-KAK 414
              + GE P  C  C  +F+ +  Y VH        P      G   + + Y  +  KA 
Sbjct: 394 ---HTGEKPYKCNECGKSFRMKIHYQVHLVVHTGEKPYKCEVCGKAFRQSSYLKIHLKAH 450

Query: 415 QHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQL-------LKMK 467
              K   C  C + F+     + H     G K  K  + G+G      L          K
Sbjct: 451 SVQKPFKCEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGEK 510

Query: 468 PYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSC 523
           PY CE C K ++    LLTH  +HSGE  ++C+ C K F  S  L+ H + H     + C
Sbjct: 511 PYNCEECGKVFSQASHLLTHQRVHSGEKPFKCEECGKSFSRSAHLQAHQKVHTGEKPYKC 570

Query: 524 DECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC 583
            EC    +    L MH     G K   C +C   F+  + L  H  + H  +   KC +C
Sbjct: 571 GECGKGFKWSLNLDMHQRVHTGEKPYTCGECGKHFSQASSLQLH-QSVHTGEKPYKCDVC 629

Query: 584 NVV 586
             V
Sbjct: 630 GKV 632

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2

 Score =  134 bits (338), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 203/484 (41%), Gaps = 55/484 (11%)

Query: 109  TMLTTTRVGNISLKIPRCEECDINFPSKMRHTFH-LQHHLEDPDLPVNFMHECRECGSQF 167
            + LT  ++ +   K+ +CEEC   F      T H   H  E P       ++C ECG  F
Sbjct: 699  STLTKHKIIHAGEKLYKCEECGKAFNRSSNLTIHKFIHTGEKP-------YKCEECGKAF 751

Query: 168  ---ADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICK 224
               + + KH        IH ++   KC  C K  F    +L+ H R H   + Y+CE C 
Sbjct: 752  NWSSSLTKHKR------IHTREKPFKCKECGK-AFIWSSTLTRHKRIHTGEKPYKCEECG 804

Query: 225  KKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCF 284
            K F   STL +H   H   KP+KC+ CG    +A +  + L  H ++ +  K+  C++C 
Sbjct: 805  KAFSRSSTLTKHKTIHTGEKPYKCKECG----KAFKHSSALAKHKIIHAGEKLYKCEECG 860

Query: 285  KCCQVFPSNEENLRKHF-----EKVHFDLEFDEAHFYDVVLKCVYRFRIVQ-YFLCELCD 338
            K    F +   NL  H      EK     E D+A  +   L    R    +  + CE C 
Sbjct: 861  K---AF-NQSSNLTTHKIIHTKEKPSKSEECDKAFIWSSTLTEHKRIHTREKTYKCEECG 916

Query: 339  KTSIHYTYLCLHKKLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRAVH--ELPPEPN 395
            K     ++L  HK++      + GE P  CE C   F ++   L  ++ +H  E P +  
Sbjct: 917  KAFSQPSHLTTHKRM------HTGEKPYKCEECGKAF-SQSSTLTTHKIIHTGEKPYKCE 969

Query: 396  SGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEP-KEPKSG 454
                +  +++     +      K   C  C KAFS       H TR H  ++P K  + G
Sbjct: 970  ECGKAFRKSSTLTEHKIIHTGEKPYKCEECGKAFSQSSTLTRH-TRMHTGEKPYKCEECG 1028

Query: 455  EGLPALEQLL-------KMKPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFR 506
            +      +L          KPY CE C K +    +L  H  +H+ E  Y+C+ C K F 
Sbjct: 1029 KAFNRSSKLTTHKIIHTGEKPYKCEECGKAFISSSTLNGHKRIHTREKPYKCEECGKAFS 1088

Query: 507  SSVTLRNHTRRHDN---FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKAL 563
             S TL  H R H     + C EC    ++ +AL  H +   G K   CEKC   F   ++
Sbjct: 1089 QSSTLTRHKRLHTGEKPYKCGECGKAFKESSALTKHKIIHTGEKPYKCEKCGKAFNQSSI 1148

Query: 564  LAEH 567
            L  H
Sbjct: 1149 LTNH 1152

Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  132 bits (333), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 191/475 (40%), Gaps = 38/475 (8%)

Query: 126 CEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQ 185
           C+EC   F  +     HL+ H  +        +EC+ECG  F  I    L  H+   H  
Sbjct: 276 CKECGKAFTERSSLIVHLRQHTREKS------YECKECGKTF--IQPSRLTEHMR-SHTG 326

Query: 186 DNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKP 245
           +   +C  C    F +   L+ H+R H   + +EC IC K F   S L  H  +H   KP
Sbjct: 327 EKPYQCDQCGNA-FASSSYLTTHLRTHTGEKPFECNICGKAFTRSSYLLGHIRTHTGEKP 385

Query: 246 FKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVH 305
           ++C++CG   S  S L  HL+ H+      +   C +C K    F    E+++ H  +  
Sbjct: 386 YECKVCGKAFSGRSWLTIHLRKHT----GERPYPCTECEKAFTSFAQLTEHIKTHTGEKP 441

Query: 306 FDLEFDEAHFYDV-VLKCVYRFRI-VQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGE 363
           F  +     F +   LK  +R    ++ + C  C K     + L  H       L + GE
Sbjct: 442 FRCKVCARTFRNSSCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHV------LIHNGE 495

Query: 364 SPV-CEPCNLTFKNEWQYLVHNRA-VHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVT 421
            P  C+ C   F      + H R    E P E      ++  ++      +     K   
Sbjct: 496 KPYECKECGKAFSTSSGLVEHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFE 555

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKS-GEGLPALEQLLKM-------KPYTCEI 473
           C+ C+K F+     + H  R H  ++P E K  G+  P    L K        +PY C+ 
Sbjct: 556 CNQCDKTFTRSSYLRIHM-RTHTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKE 614

Query: 474 CSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVE 529
           C K +     L  H   HS E  +QC VC K FR+S +L  H R H     + C  C   
Sbjct: 615 CGKGFISFAQLTVHIKTHSSERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKA 674

Query: 530 CQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCN 584
               + L +H     G K  AC++C   F+  + L  HI + H  +   +C  C 
Sbjct: 675 FTARSGLTIHLRNHTGEKSYACQECGKAFSTSSGLIAHIRS-HKGEKPFECDHCG 728

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q5MCW4|ZN569_HUMAN Zinc finger protein 569 OS=Homo sapiens GN=ZNF569 PE=2 SV=1

 Score =  131 bits (330), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 196/458 (42%), Gaps = 65/458 (14%)

Query: 126 CEECDINFPSKMRHTFHLQ-HHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHV 184
           C+EC+ +F  K     H + H  E P       +EC ECG  F+   K SL  H   +H 
Sbjct: 272 CKECEKSFSQKSNLIDHEKIHTGEKP-------YECNECGKAFSQ--KQSLIAHQK-VHT 321

Query: 185 QDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVK 244
            +    C  C K  F    SL++HMR H   + Y+C+ C K F   S L  H   H   K
Sbjct: 322 GEKPYACNECGKA-FPRIASLALHMRSHTGEKPYKCDKCGKAFSQFSMLIIHVRIHTGEK 380

Query: 245 PFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKV 304
           P++C  CG   S++S L  H+++H    +  K   CK+C K    F S+++N   H +K+
Sbjct: 381 PYECNECGKAFSQSSALTVHMRSH----TGEKPYECKECRK---AF-SHKKNFITH-QKI 431

Query: 305 HFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGES 364
           H                        + + C  C K  I  + L  H+++      + GE 
Sbjct: 432 HTR---------------------EKPYECNECGKAFIQMSNLVRHQRI------HTGEK 464

Query: 365 P-VCEPCNLTFKNEWQYLVHNRAVH--ELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVT 421
           P +C+ C   F  +   + H + +H  E P E N    +  Q   +   +K     K   
Sbjct: 465 PYICKECGKAFSQKSNLIAHEK-IHSGEKPYECNECGKAFSQKQNFITHQKVHTGEKPYD 523

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKE-PKSGEGLPALEQL-LKM------KPYTCEI 473
           C+ C KAFS   +   H  R H  ++P E  K G+       L L M      KPY C  
Sbjct: 524 CNECGKAFSQIASLTLH-LRSHTGEKPYECDKCGKAFSQCSLLNLHMRSHTGEKPYVCNE 582

Query: 474 CSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVE 529
           C K ++   SL+ H   H+GE  Y+C+ C K F  S +L  H R H     F C +C   
Sbjct: 583 CGKAFSQRTSLIVHMRGHTGEKPYECNKCGKAFSQSSSLTIHIRGHTGEKPFDCSKCGKA 642

Query: 530 CQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEH 567
              +++L +H  +  G K   C +C   F+ K+ L  H
Sbjct: 643 FSQISSLTLHMRKHTGEKPYHCIECGKAFSQKSHLVRH 680

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q4V348|Z658B_HUMAN Zinc finger protein 658B OS=Homo sapiens GN=ZNF658B PE=2 SV=1

 Score =  131 bits (329), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 214/548 (39%), Gaps = 82/548 (14%)

Query: 71  EVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECD 130
           E       +  ++ H  VH      E      S   N  +    R+ +   K   C +C+
Sbjct: 310 ECEKTFSHKTHLSVHQRVHTGEKPYECNDCGKSFTYNSALRAHQRI-HTGEKPYECSDCE 368

Query: 131 INFP--SKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQ 188
             F   S +R   H  H  E P       +EC ECG  FA I    L+ H   IH ++  
Sbjct: 369 KTFAHNSALR-AHHRIHTGEKP-------YECNECGRSFAHIS--VLKAHQR-IHTREKP 417

Query: 189 LKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
            +C  C + +F    +L  H R H   + YEC  C+K F + S LK H   H   KP+KC
Sbjct: 418 YECNECGR-SFTYNSALRAHQRIHTGRKPYECSDCEKTFAHNSALKIHQRIHTGEKPYKC 476

Query: 249 EICGHYLSRASRLRAHLKAHSV------------------VASNNKVQNCKK---CFKCC 287
             C    +  S LRAH   H+                   ++++ ++   +K   C KC 
Sbjct: 477 NECEKTFAHNSALRAHQNIHTGEKLYECSECGKTFFQKTRLSTHRRIHTGEKPYECSKCG 536

Query: 288 QVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQY---------FLCELCD 338
           + F S +  L  H E++H   +  E +        VY+  ++ +         + C  C 
Sbjct: 537 KTF-SQKSYLSGH-ERIHTGEKPYECNVCGKTF--VYKAALIVHQRIHTGEKPYECNECG 592

Query: 339 KTSIHYTYLCLHKKLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRA-VHELPPEPNS 396
           KT    T+LC H+++      + GE P  C  C  TF +      H+R    E P E N 
Sbjct: 593 KTFSQRTHLCAHQRI------HTGEKPYECNECGKTFADNSALRAHHRIHTGEKPYECND 646

Query: 397 GAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEG 456
              +  + +      + +   K   CS C K FS K    AH  R H         +GE 
Sbjct: 647 CGKTFSKTSHLRAHLRTRSGEKPYECSECGKTFSEKSYVSAH-QRVH---------TGE- 695

Query: 457 LPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHT 515
                     KPY C +C K +    +L  H  +H+GE  Y+C+ C K F     L  H 
Sbjct: 696 ----------KPYECNVCGKPFAHNSTLRVHQRIHTGEKSYECNDCGKTFSQKSHLSAHQ 745

Query: 516 RRHDN---FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKH 572
           R H     + C+EC       + LR+H     G K   C++C   F  KA L  H    H
Sbjct: 746 RIHTGEKPYECNECGKAFAQNSTLRVHQRIHTGEKPYECDECGKTFVRKAALRVHHTRMH 805

Query: 573 NTDVTLKC 580
             + TL C
Sbjct: 806 TREKTLAC 813

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q80W31|ZN569_MOUSE Zinc finger protein 569 OS=Mus musculus GN=Znf569 PE=2 SV=2

 Score =  130 bits (328), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 193/458 (42%), Gaps = 65/458 (14%)

Query: 126 CEECDINFPSKMRHTFHLQ-HHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHV 184
           C+EC  +F  K     H + H  E P       ++C ECG  F+   K SL  H   +H 
Sbjct: 265 CQECGKSFGQKSNLIDHEKIHTGEKP-------YKCNECGKSFSQ--KQSLVAHQK-VHT 314

Query: 185 QDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVK 244
            +    C  C K  F    SL++HMR H   + Y+C+ C K F   S L  H   H   K
Sbjct: 315 GEKPYACNECGKA-FPRVASLALHMRGHTGEKPYKCDKCGKAFSQFSMLIIHVRVHTGEK 373

Query: 245 PFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKV 304
           P++C  CG   S++S L  H+++H    +  K   CK+C K      S+++N   H +K+
Sbjct: 374 PYECGECGKAFSQSSALTVHIRSH----TGEKPYECKECRKSF----SHKKNFITH-QKI 424

Query: 305 HFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGES 364
           H                        + + C  C K  I  + L  H+++      + GE 
Sbjct: 425 HTR---------------------EKPYGCNECGKAFIQMSNLVRHQRI------HTGEK 457

Query: 365 P-VCEPCNLTFKNEWQYLVHNRAVH--ELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVT 421
           P +C+ C   F  +   + H + +H  E P E N    +  Q   +   +K     K   
Sbjct: 458 PYLCKECGKAFSQKSNLIAHEK-IHSGEKPYECNECGKAFSQKQNFITHQKVHTGEKPYD 516

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKE-PKSGEGLPALEQL-LKM------KPYTCEI 473
           C+ C KAFS   +   H  R H  ++P E  K G+       L L M      KPY C  
Sbjct: 517 CNKCGKAFSQIASLTLHL-RSHTGEKPYECEKCGKAFSQCSLLNLHMRSHTGEKPYVCNE 575

Query: 474 CSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVE 529
           C K ++   SL+ H   H+GE  Y+C+ C K F  S +L  H R H     F C  C   
Sbjct: 576 CGKAFSQRTSLIVHMRGHTGEKPYECNKCGKAFSQSSSLTIHIRGHTGEKPFDCSNCGKA 635

Query: 530 CQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEH 567
              +++L +H  +  G K   C +C   F+ K+ L  H
Sbjct: 636 FSQISSLTLHMRKHTGEKPYVCIECGKAFSQKSHLVRH 673

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 OS=Homo sapiens GN=ZNF658 PE=2 SV=2

 Score =  130 bits (327), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 213/548 (38%), Gaps = 82/548 (14%)

Query: 71   EVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECD 130
            E       +  ++ H  VH      E      S   N  +    R+ +   K   C +C+
Sbjct: 550  ECEKTFSHKTHLSVHQRVHTGEKPYECNDCGKSFTYNSALRAHQRI-HTGEKPYECSDCE 608

Query: 131  INFP--SKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQ 188
              F   S +R   H  H  E P       +EC ECG  FA I    L+ H   IH  +  
Sbjct: 609  KTFAHNSALR-AHHRIHTGEKP-------YECNECGRSFAHIS--VLKAHQR-IHTGEKP 657

Query: 189  LKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
             +C  C + +F    +L  H R H   + YEC  C+K F + S LK H   H   KP++C
Sbjct: 658  YECNECGR-SFTYNSALRAHQRIHTGRKPYECSDCEKTFAHNSALKIHQRIHTGEKPYEC 716

Query: 249  EICGHYLSRASRLRAHLKAHSV------------------VASNNKVQNCKK---CFKCC 287
              C    +  S LRAH   H+                   ++++ ++   +K   C KC 
Sbjct: 717  NECEKTFAHNSALRAHQNIHTGEKLYECSECGKTFFQKTRLSTHRRIHTGEKPYECSKCG 776

Query: 288  QVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQY---------FLCELCD 338
            + F S +  L  H E++H   +  E +        VY+  ++ +         + C  C 
Sbjct: 777  KTF-SQKSYLSGH-ERIHTGEKPYECNVCGKTF--VYKAALIVHQRIHTGEKPYECNQCG 832

Query: 339  KTSIHYTYLCLHKKLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRA-VHELPPEPNS 396
            KT    T+LC H+++      + GE P  C  C  TF +      H+R    E P E N 
Sbjct: 833  KTFSQRTHLCAHQRI------HTGEKPYECNECGKTFADNSALRAHHRIHTGEKPYECND 886

Query: 397  GAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEG 456
               +  + +      + +   K   CS C K FS K    AH  R H         +GE 
Sbjct: 887  CGKTFSKTSHLRAHLRTRSGEKPYECSECGKTFSEKSYVSAH-QRVH---------TGE- 935

Query: 457  LPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHT 515
                      KPY C +C K +    +L  H  +H+GE  Y+C+ C K F     L  H 
Sbjct: 936  ----------KPYECNVCGKPFAHNSTLRVHQRIHTGEKSYECNDCGKTFSQKSHLSAHQ 985

Query: 516  RRHDN---FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKH 572
            R H     + C+EC       + LR+H     G K   C++C   F  KA L  H    H
Sbjct: 986  RIHTGEKPYECNECGKAFAQNSTLRVHQRIHTGEKPYECDECGKTFVRKAALRVHHTRMH 1045

Query: 573  NTDVTLKC 580
              + TL C
Sbjct: 1046 TREKTLAC 1053

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q02386|ZNF45_HUMAN Zinc finger protein 45 OS=Homo sapiens GN=ZNF45 PE=2 SV=2

 Score =  130 bits (326), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 176/455 (38%), Gaps = 85/455 (18%)

Query: 125 RCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHV 184
           +CEEC + F  +     HL+ H           ++C ECG  F+   +  L+ H   IH 
Sbjct: 277 KCEECGVGFSQRSYLQVHLKVHTGKKP------YKCEECGKSFS--WRSRLQAH-ERIHT 327

Query: 185 QDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVK 244
            +   KC  C K +F     L+IH R H   + Y+CE C K F   S L+ H +SH   K
Sbjct: 328 GEKPYKCNACGK-SFSYSSHLNIHCRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEK 386

Query: 245 PFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKV 304
           P+KCE CG    RAS L  H + H    +  K   C  C K      S++ N       +
Sbjct: 387 PYKCEECGKGFCRASNLLDHQRGH----TGEKPYQCDACGK--GFSRSSDFN-------I 433

Query: 305 HFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGES 364
           HF +   E                 + + CE C K     + L  H++       + GE 
Sbjct: 434 HFRVHTGE-----------------KPYKCEECGKGFSQASNLLAHQR------GHTGEK 470

Query: 365 PV-CEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCS 423
           P  C  C   F       VH R +H                 PY              C 
Sbjct: 471 PYKCGTCGKGFSRSSDLNVHCR-IH-------------TGEKPY-------------KCE 503

Query: 424 VCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQL-------LKMKPYTCEICSK 476
            C KAFS   + + H     G K  +  + G+G     QL          KPY CE C K
Sbjct: 504 RCGKAFSQFSSLQVHQRVHTGEKPYQCAECGKGFSVGSQLQAHQRCHTGEKPYQCEECGK 563

Query: 477 TYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVECQD 532
            +    + L H  +H+GE  Y+CDVC K FR    L+ H R H     + C+EC      
Sbjct: 564 GFCRASNFLAHRGVHTGEKPYRCDVCGKRFRQRSYLQAHQRVHTGERPYKCEECGKVFSW 623

Query: 533 LNALRMHTLREHGYKILACEKCDVKFTHKALLAEH 567
            + L+ H     G K   CE+C   F+  + L  H
Sbjct: 624 SSYLQAHQRVHTGEKPYKCEECGKGFSWSSSLIIH 658

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9HCG1|ZN160_HUMAN Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 PE=2 SV=3

 Score =  129 bits (324), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 138/526 (26%), Positives = 207/526 (39%), Gaps = 47/526 (8%)

Query: 92  TPWQEVPGSIPSQAMNP-------TMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQ 144
           +P Q++P S+ +            ++LT  R  N   K  +C EC   F      T H +
Sbjct: 218 SPLQQIPSSVQTHRSKKYHELNHFSLLTQRRKANSCGKPYKCNECGKAFTQNSNLTSHRR 277

Query: 145 -HHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQL 203
            H  E P       ++C ECG  F   ++ +L  H   IH  +   KC  C K  F++  
Sbjct: 278 IHSGEKP-------YKCSECGKTFT--VRSNLTIH-QVIHTGEKPYKCHECGKV-FRHNS 326

Query: 204 SLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRA 263
            L+ H R H   + Y+C  C K F   S L  H + H   KPFKC  CG   ++ S L +
Sbjct: 327 YLATHRRIHTGEKPYKCNECGKAFRGHSNLTTHQLIHTGEKPFKCNECGKLFTQNSHLIS 386

Query: 264 HLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKH-FEKVHFDLEFDEAHFYDVVLKC 322
           H + H    +  K   C +C K   V  S   +   H  EK +   E  +   Y+  L  
Sbjct: 387 HWRIH----TGEKPYKCNECGKAFSVRSSLAIHQTIHTGEKPYKCNECGKVFRYNSYLGR 442

Query: 323 VYRFRIVQY-FLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPV-CEPCNLTFKNEWQY 380
             R    +  + C  C K         +H  L    + + G  P  C  C+  F    Q 
Sbjct: 443 HRRVHTGEKPYKCNECGKA------FSMHSNLATHQVIHTGTKPFKCNECSKVFTQNSQ- 495

Query: 381 LVHNRAVH--ELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAH 438
           L ++R +H  E P + N    +    +     +      K   C  C K+F+ K + ++H
Sbjct: 496 LANHRRIHTGEKPYKCNECGKAFSVRSSLTTHQAIHSGEKPYKCIECGKSFTQKSHLRSH 555

Query: 439 YTRQHGNKEPKEPKSGEGLPALEQLLKM-------KPYTCEICSKTYTVEGSLLTHYDMH 491
                G K  K  + G+      QL +        KPY C  C + ++   SL  H  +H
Sbjct: 556 RGIHSGEKPYKCNECGKVFAQTSQLARHWRVHTGEKPYKCNDCGRAFSDRSSLTFHQAIH 615

Query: 492 SGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVECQDLNALRMHTLREHGYK 547
           +GE  Y+C  C K FR +  L  H R H     + C+EC       + L  H +   G K
Sbjct: 616 TGEKPYKCHECGKVFRHNSYLATHRRIHTGEKPYKCNECGKAFSMHSNLTTHKVIHTGEK 675

Query: 548 ILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVI 593
              C +C   FT  + LA H  T H  +   +C  C     +   +
Sbjct: 676 PYKCNQCGKVFTQNSHLANHQRT-HTGEKPYRCNECGKAFSVRSSL 720

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8NB50|ZFP62_HUMAN Zinc finger protein 62 homolog OS=Homo sapiens GN=ZFP62 PE=2 SV=3

 Score =  128 bits (322), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 191/499 (38%), Gaps = 62/499 (12%)

Query: 109 TMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQ-HHLEDPDLPVNFMHECRECGSQF 167
           + L   ++ +   K   C++C   F S      H + H  E P       ++C ECG  +
Sbjct: 154 SRLVQHKIMHTGEKRYECDDCGGTFRSSSSLRVHKRIHTGEKP-------YKCEECGKAY 206

Query: 168 ADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKF 227
                 SL  H S  H  +   KC  C K +F     L  H R H   + YEC  C K F
Sbjct: 207 MSYS--SLINHKS-THSGEKNCKCDECGK-SFNYSSVLDQHKRIHTGEKPYECGECGKAF 262

Query: 228 INKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCC 287
            N S L+ H   H   KP++C+ICG   S +S LR H + H+      +   C K F  C
Sbjct: 263 RNSSGLRVHKRIHTGEKPYECDICGKTFSNSSGLRVHKRIHTGEKP-YECDECGKAFITC 321

Query: 288 QVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYL 347
           +                   L     HF D   K            C+ C+K S +Y+ L
Sbjct: 322 RTL-----------------LNHKSIHFGDKPYK------------CDECEK-SFNYSSL 351

Query: 348 CLHKKLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNP 406
            +  K+ H+     GE P  C+ C   F+N    +VH R      P      G     + 
Sbjct: 352 LIQHKVIHT-----GEKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDVCGKAFSYSS 406

Query: 407 YPPLRKAKQHVKSV-TCSVCEKAFSSKENCKAHYTRQHGNKE------PKEPKSGEGLPA 459
              + K+    K    C  C K+FS       H T   G +        K  ++  GL  
Sbjct: 407 GLAVHKSIHPGKKAHECKECGKSFSYNSLLLQHRTIHTGERPYVCDVCGKTFRNNAGLKV 466

Query: 460 LEQL-LKMKPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRR 517
             +L    KPY C++C K Y    SL  H  +H GE  Y+C  C K F  S  L  H R 
Sbjct: 467 HRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHLGEKPYKCSYCEKSFNYSSALEQHKRI 526

Query: 518 HDN---FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNT 574
           H     F CDEC    ++ + L++H     G +   CE+C   +   + L  H +  H  
Sbjct: 527 HTREKPFGCDECGKAFRNNSGLKVHKRIHTGERPYKCEECGKAYISLSSLINHKSV-HPG 585

Query: 575 DVTLKCQLCNVVVLIEEVI 593
           +   KC  C    +    +
Sbjct: 586 EKPFKCDECEKAFITYRTL 604

May play a role in differentiating skeletal muscle.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	597
328711731	588	PREDICTED: zinc finger protein 271-like	0.765	0.777	0.283	2e-34
432912348	1168	PREDICTED: zinc finger protein Xfin-like	0.715	0.365	0.291	7e-34
328726602	740	PREDICTED: zinc finger protein Xfin-like	0.812	0.655	0.249	4e-33
390478794	1513	PREDICTED: zinc finger protein 729-like	0.752	0.296	0.287	5e-33
260837236	581	hypothetical protein BRAFLDRAFT_93654 [B	0.726	0.746	0.294	9e-33
358417009	1448	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.654	0.270	0.274	2e-32
338710160	708	PREDICTED: zinc finger protein 234 [Equu	0.723	0.610	0.278	3e-32
296477336	699	TPA: zinc finger protein 107 [Bos taurus	0.725	0.619	0.274	7e-32
260824663	415	hypothetical protein BRAFLDRAFT_125176 [	0.626	0.901	0.290	1e-31
328711363	643	PREDICTED: zinc finger protein 845-like	0.651	0.604	0.283	3e-31

>gi|328711731|ref|XP_003244624.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 206/498 (41%), Gaps = 41/498 (8%)

Query: 103 SQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHL-EDPDLPVNFMHECR 161
           SQ+ N   LTT R  +   K   C+ C+++F      T H + H  E P       + C 
Sbjct: 67  SQSCN---LTTHRRTHTGEKPYICDVCNMSFSQSGSLTSHRRTHTGEKP-------YACD 116

Query: 162 ECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECE 221
            C   F+D    +L+ H    H  +    C IC K +F    SL+ H R H   + Y C+
Sbjct: 117 ICEKSFSDSG--TLKKHRR-THTGEKPFTCDICEK-SFAESSSLTSHRRTHTGEKPYACD 172

Query: 222 ICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCK 281
           IC+K F +  TLK+H  +H   KPF C+IC    S++  L  H + H    +  K   C 
Sbjct: 173 ICEKSFSDSGTLKKHRRTHTGEKPFACDICDKSFSQSCNLTTHRRTH----TGEKPYICD 228

Query: 282 KCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDV-VLKCVYRFRIVQY-FLCELCDK 339
            C        S   + R H  +  +  +  E  F D   LK   R    +  F C++CD 
Sbjct: 229 VCNMSFSQSGSLTSHRRTHTGEKPYACDICEKSFSDSGTLKKHRRTHTGEKPFACDICDM 288

Query: 340 TSIHYTYLCLHKKLKHSNLTYGGESP-VCEPCNLTFKNEWQYLVHNRA-VHELPPEPNSG 397
           +     +L  H++      T+ GE P  C+ C  +F        H R    E P   +  
Sbjct: 289 SFSQSCHLTTHRR------THTGEKPYACDVCEKSFSKSGTLTSHRRTHTGEKPYACDVC 342

Query: 398 AGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNK-------EPKE 450
             S  Q+      R+     K   C +C+K+F+   +   H     G+K       E   
Sbjct: 343 DMSFSQSGSLKKHRRTHTGEKPFECDICDKSFAESSSLTRHRRTHTGDKPYACDVCEMSF 402

Query: 451 PKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSV 509
            K+G            KPY C++C K+++  G L TH   H+GE  Y CDVC K F  S 
Sbjct: 403 SKNGTLTSHRRSHTGEKPYICDVCDKSFSESGKLTTHQRTHTGEKPYACDVCEKSFSESG 462

Query: 510 TLRNHTRRHDN---FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAE 566
           TL+ H R H     ++CD C       + L+ H     G K  AC+ CD  F   + L  
Sbjct: 463 TLKKHRRTHTGEKPYACDVCEKSFSGSDTLKKHRRTHTGEKPFACDICDKSFAESSSLTR 522

Query: 567 HINTKHNTDVTLKCQLCN 584
           H  T H  +    C +C+
Sbjct: 523 HRRT-HTGEKPYICDVCD 539

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432912348|ref|XP_004078886.1| PREDICTED: zinc finger protein Xfin-like [Oryzias latipes]

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 196/474 (41%), Gaps = 47/474 (9%)

Query: 126  CEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQ 185
            CE C  +F +      H++ H  +   P      C  C   FA +   S   H+   H  
Sbjct: 649  CEVCGKSFTTGSDLKVHIETHTAEKPFP------CDICKKAFASL--RSFTCHMR-THTS 699

Query: 186  DNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKP 245
                 C +C K  F     L IHMR H   R Y CE+C+K+F  KS+L  H  +H   +P
Sbjct: 700  LRPFTCKLCQK-GFMQSRDLKIHMRIHTGERPYSCELCEKQFSYKSSLSVHIRTHTGERP 758

Query: 246  FKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVH 305
            F CE+CG   S+ S+L+AH++ H+        +N   C  C +VF S   NL  H  K H
Sbjct: 759  FTCEVCGKTFSQRSKLKAHIRTHT-------AENPFSCDICKKVFVS-LRNLTCHM-KTH 809

Query: 306  FDLEFDEAHFYDVVLKCVYR-------FRI---VQYFLCELCDKTSIHYTYLCLHKKLKH 355
                 +  +   V  KC  +        RI    + + C++C KT IH   L  H +   
Sbjct: 810  TG---ERPYSCKVCQKCFIQPSHLNIHMRIHTGERPYSCDICKKTFIHANRLTCHMR--- 863

Query: 356  SNLTYGGESP-VCEPCNLTFKNEWQYLVHNRA-VHELPPEPNSGAGSVLQNNPYPPLRKA 413
               T+ GE P  CE C   F +     VH R    E P        +   N+      + 
Sbjct: 864  ---THTGERPFTCELCQKGFMDSRALKVHMRTHTGERPYSCKVCEKNFAHNSSLKVHMRI 920

Query: 414  KQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEI 473
                +  TC VC K F++  + KAH        E   PKS +    +      KPY+C++
Sbjct: 921  HTGERPFTCEVCGKGFTTGSDLKAHAGTH--TAEKLFPKSRDLKIHMRTHTGEKPYSCKV 978

Query: 474  CSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVE 529
            C K +    SL  H  +H+GE  + C+VC K F     L+ H R H     +SC  C   
Sbjct: 979  CEKQFAQNSSLQVHMRIHTGERPFTCEVCGKSFIRGSDLKVHMRTHTGEKPYSCKVCEKH 1038

Query: 530  CQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC 583
                ++L +H     G +   CE C   FT  + L  HI T H       C +C
Sbjct: 1039 FAHNSSLNVHMRIHTGERPFTCEVCGKSFTTGSDLKVHIRT-HTAGKIFPCDIC 1091

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328726602|ref|XP_003248963.1| PREDICTED: zinc finger protein Xfin-like [Acyrthosiphon pisum]

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 220/546 (40%), Gaps = 61/546 (11%)

Query: 83  TCHTAVHQATPWQEVPGSIPSQAMN---PTMLTTTRVGNISLKIPRCEECDINFPSKMRH 139
           +C+   H+ T   E P +     M+      LT+ R  +   K   C+ CD++F      
Sbjct: 109 SCNLTTHRRTHTGEKPFACDVCDMSFSKSGTLTSHRRTHTGEKPYACDVCDMSFSKNGTL 168

Query: 140 TFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENF 199
           T H + H  +   P +    C    SQ   +  H         H  +    C +C+K +F
Sbjct: 169 TSHRRTHTGEKPYPCDI---CDMSFSQSGSLTNHRRS------HTGEKPYICDVCDK-SF 218

Query: 200 KNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRAS 259
                L+ H + H   + Y C++C+K F    TLK+H  +H   KP+ C++C    S + 
Sbjct: 219 SESGKLTRHRQTHTGEKPYACDVCEKSFSESGTLKKHRRTHTGEKPYACDVCDKSFSESG 278

Query: 260 RLRAHLKAHS------------------VVASNNKVQNCKKCFKC--CQVFPSNEENLRK 299
            L  H + H+                   + S+ +    +K + C  C+   S  + L+K
Sbjct: 279 NLTTHRRTHTGEKPFACDVCDMSFSQSGTLTSHRRTHTGEKPYACDVCEKSFSESDTLKK 338

Query: 300 HFEKVH-----FDLEFDEAHFYDVVLKCVYRFRIV--QYFLCELCDKTSIHYTYLCLHKK 352
           H  + H     F  +  +  F +      +R      + + C++C+K+           +
Sbjct: 339 H-RRTHTGEKPFTCDICDKSFAESSSLTSHRRTHTGEKPYACDICEKS------FSDSGR 391

Query: 353 LKHSNLTYGGESP-VCEPCNLTFKNEWQYLVHNRA-VHELPPEPNSGAGSVLQNNPYPPL 410
           LK    T+ GE P  C+ CN +F        H R    E P   +    S  Q+      
Sbjct: 392 LKKHRRTHTGEKPFACDICNKSFSQSCNLTTHRRTHTGEKPFACDVCDMSFSQSGTLTSH 451

Query: 411 RKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNK-------EPKEPKSGEGLPALEQL 463
           R+     K   C VCEK+FS  +  K H     G K       E    +SG         
Sbjct: 452 RRTHTGEKPYACDVCEKSFSESDTLKKHRRTHTGEKPYACDVCEKSFSESGTLKKHRRTH 511

Query: 464 LKMKPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN-- 520
              KP+ C++C  +++  G+L +H   H+GE  Y CDVC K F  S TL+ H R H    
Sbjct: 512 TGEKPFACDVCDMSFSQSGTLTSHRRTHTGEKPYACDVCEKSFSGSDTLKKHRRTHTGEK 571

Query: 521 -FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLK 579
            F+CD C +   + ++L  H     G K  AC+ C+  F+    L +H  T H  +    
Sbjct: 572 PFACDVCDMSFAESSSLTSHRRTHTGEKPYACDVCEKSFSESGTLKKHRRT-HTGEKPFA 630

Query: 580 CQLCNV 585
           C +C++
Sbjct: 631 CDVCDM 636

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390478794|ref|XP_003735581.1| PREDICTED: zinc finger protein 729-like [Callithrix jacchus]

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 208/505 (41%), Gaps = 56/505 (11%)

Query: 108  PTMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQ-HHLEDPDLPVNFMHECRECG-- 164
            P+ L+T R+ +   +  RC+EC   F    R + H + H  E P       ++C ECG  
Sbjct: 551  PSRLSTHRMIHTGERRYRCQECGKAFSQSSRLSTHKKIHTGEKP-------YKCEECGKA 603

Query: 165  -SQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEIC 223
             +QF+ + KH +      IH  +   KC  C K  FK    L+ H R H   + Y+CE C
Sbjct: 604  FNQFSYLTKHKI------IHTGEKSYKCEECGK-GFKQSSHLTNHKRIHTGEKSYKCEEC 656

Query: 224  KKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKC 283
             K F   S L  H   H   KP+KCE CG   + +S LR H + H    +  KV  C +C
Sbjct: 657  GKGFKQSSHLTNHKRIHTGEKPYKCENCGKAFTLSSYLRRHRRIH----TGEKVYRCGEC 712

Query: 284  FKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRF---RIVQY----FLCEL 336
             K   +F +   NL +H ++VH      +        K    F   +I+      F CE 
Sbjct: 713  GK---IF-NQSGNLSQH-KRVHTGENLYQCEECGKAFKWFSTFTRHKIIHTGEKPFKCEE 767

Query: 337  CDKTSIHYTYLCLHKKLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRAVH--ELPPE 393
            C K     + L  HK      + + GE P  CE C   FK+      H R +H  E    
Sbjct: 768  CGKAFKQSSTLTTHK------IIHTGEKPFKCEECGKAFKHPSTLSTH-RMIHTGEKRYR 820

Query: 394  PNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKS 453
                  +  +++     ++     K   C  C KAF+       H     G K     + 
Sbjct: 821  CQECGKAFSRSSQLTTHKRIHTGEKPYKCEECGKAFNRFSYLTKHKIIHTGEKSYTCEEC 880

Query: 454  GEGLPALEQLLK-------MKPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEF 505
            G+G      L K        KPY CE C K ++V  +L TH   H+GE  Y+C+ C K F
Sbjct: 881  GKGFNWSSTLTKHKRIHTGEKPYKCEECGKAFSVSSNLATHKMTHTGEKPYKCEECGKGF 940

Query: 506  RSSVTLRNHTRRHDN---FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKA 562
              S TL  H   H     + C+EC       + L  H +   G K   CE+C   F+H +
Sbjct: 941  SWSSTLTKHKIIHTGVKPYKCEECGKAFNQSSNLTTHKIIHTGEKSYKCEECGKAFSHSS 1000

Query: 563  LLAEHINTKHNTDVTLKCQLCNVVV 587
            +L  H    H  +   KC+ C +  
Sbjct: 1001 ILTTHRRI-HTGEKPYKCEECGIAF 1024

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260837236|ref|XP_002613611.1| hypothetical protein BRAFLDRAFT_93654 [Branchiostoma floridae] gi|229298997|gb|EEN69620.1| hypothetical protein BRAFLDRAFT_93654 [Branchiostoma floridae]

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 217/496 (43%), Gaps = 62/496 (12%)

Query: 117 GNISLKIPRCEECDINFPSKMRHTFHLQHHL-EDPDLPVNFMHECRECGSQFADI--LKH 173
           G+   K+ RCEEC+  F        H++ H  E P       ++C EC  QF+ +  LK 
Sbjct: 39  GSSREKVYRCEECNRQFSRLDNLKTHMRTHTGEKP-------YKCEECSKQFSQLGNLKT 91

Query: 174 SLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTL 233
            +ETH       + +  C  CNK +F  Q  L  HM  H   + Y+C+ C K+F   + L
Sbjct: 92  QMETHTG-----ERRYMCEECNK-HFSTQGYLKKHMHTHTGEKPYKCQECSKQFRLLTGL 145

Query: 234 KEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSN 293
           K H + H   KPF+CE C    +  S L+ H+  H+   S        KC +C + F S 
Sbjct: 146 KTHMLIHTGQKPFRCEECSKQFTTLSNLKTHMLTHTGEKSY-------KCDECSKQF-SR 197

Query: 294 EENLRKHFEKVH-----FDLEFDEAHFYDV-VLKCVYRFRIVQ-YFLCELCDKTSIHYTY 346
           +++L+KH  ++H     F  E     F  +  LK   R    + ++ CE C +       
Sbjct: 198 KDSLKKHV-RIHLGEKPFKCEECSKQFSRLSSLKIHMRTHTGEKHYRCEECSRQFSQLGN 256

Query: 347 LCLHKKLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNN 405
           L  H +      T+ GE P  CE C+  F+++     H R      P      G      
Sbjct: 257 LKTHMR------THTGEKPFRCEECSKKFRDQGDLKKHMRTHTGEKPYRCEKCG-----K 305

Query: 406 PYPPLRKAKQHVKSVT------CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPA 459
            +  L   K H++S T      C  C K FS  E+ ++H     G K  +  + G+    
Sbjct: 306 QFSWLGHLKSHMRSHTGEKPYRCEECSKQFSRLEHLRSHMRTHTGEKPYRCEECGKQFSE 365

Query: 460 LEQL-------LKMKPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTL 511
           L  L          KPY CE CSK ++ +G+L TH   H+GE  ++C+ C K+F     L
Sbjct: 366 LHHLNTHLRTHTGEKPYKCEECSKQFSQQGTLKTHIRTHTGEKPFRCEECSKQFSQLGNL 425

Query: 512 RNHTRRHDN---FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHI 568
           + H R H     F C+ECS +   L  L  H     G K   CE+C  +F+ +  L  H+
Sbjct: 426 KKHMRTHTGEKPFKCEECSRQFSLLANLESHMRTHTGEKPFRCEECSRQFSERHQLNTHL 485

Query: 569 NTKHNTDVTLKCQLCN 584
            T H  +   KCQ C+
Sbjct: 486 RT-HTGEKPYKCQECS 500

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|358417009|ref|XP_002702020.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 91, partial [Bos taurus]

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 189/467 (40%), Gaps = 76/467 (16%)

Query: 125 RCEECDINFPSKMRHTFHLQ-HHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIH 183
           +C  CD  F      T H + H  E P       ++C  CG  F    +  L      IH
Sbjct: 495 KCNVCDKAFSRAANLTVHWRIHTGEKP-------YKCDVCGKAFNHTTRLQLHQR---IH 544

Query: 184 VQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSV 243
             +   KC +C +  F +  SLS+H R H  V+ Y+C+IC + F   ++L  H   H   
Sbjct: 545 TGEKPYKCNVCERA-FSHTSSLSVHRRLHTGVKPYKCDICGRAFSQTASLALHRSIHTGE 603

Query: 244 KPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEK 303
           KP+KC++CG   ++ ++LR H + H+        +   KC  C + F S+   L  H ++
Sbjct: 604 KPYKCDVCGKAFNQTAKLRLHRRIHT-------GEKPYKCCVCGKAF-SHTTGLELH-QR 654

Query: 304 VHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGE 363
           +H                        + + C +CDK   H + L +H++L      + GE
Sbjct: 655 IHTG---------------------EKPYKCNVCDKAFSHSSNLTVHRRL------HAGE 687

Query: 364 SPV-CEPCNLTFKNEWQYLVHNRA-VHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVT 421
            P  C+ C   F       VH R    E P + ++   +  Q       +K     KS  
Sbjct: 688 KPYKCDICGKGFSVSSSLAVHQRVHTGEKPYKCDTCGKAFNQTAKLGLHQKIHTGEKSYK 747

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           C VC KAFS   N   H          +   +GE           KPY C++C K + V 
Sbjct: 748 CDVCGKAFSRTGNLTVH----------RRVHTGE-----------KPYKCDMCGKAFRVS 786

Query: 482 GSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVECQDLNALR 537
            +L  H  +H+GE  Y+CDVC K F  +  L  H R H     + CD C         L+
Sbjct: 787 SNLAVHQRVHTGEKPYKCDVCGKAFSQATGLAVHQRIHTGEKPYKCDVCGKAFNHTTRLQ 846

Query: 538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCN 584
           +H     G K   C  CD  F   A L+ H    H  +   KC +C 
Sbjct: 847 LHQRIHTGEKPYKCNVCDKAFISAANLSVHRKL-HTGEKPYKCDICG 892

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|338710160|ref|XP_003362320.1| PREDICTED: zinc finger protein 234 [Equus caballus]

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 205/484 (42%), Gaps = 52/484 (10%)

Query: 126 CEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQ 185
           C EC  +F        H + H+ +        ++C ECG +F+   +  L+TH   +H  
Sbjct: 186 CSECGKSFCYSSALRIHQRVHMGEK------RYKCGECGKEFSQSSR--LQTHQK-VHTI 236

Query: 186 DNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKP 245
           +   KC  C K  F  + +L++H + H   + Y CE C K FI+ S L+EH   H   KP
Sbjct: 237 EKPFKCEQCGK-GFSRRPTLTVHCKLHSGEKPYSCEECGKAFIHASHLQEHQRIHTGEKP 295

Query: 246 FKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVH 305
           FKC+ICG    R S L +H   H+      K ++C KCF C         NL  H ++VH
Sbjct: 296 FKCDICGKNFRRRSALNSHCMVHT-GEKPYKCEDCGKCFTC-------SSNLHIH-QRVH 346

Query: 306 FDLEFDEAHFYDVVLKCVYRFRIVQY----------FLCELCDKTSIHYTYLCLHKKLKH 355
                ++ +  +   KC  +    Q           ++C++CDK  I+ +    H+ +  
Sbjct: 347 TG---EKPYKCEECGKCFIQPSQFQAHRRIHTGEKPYVCKVCDKGFIYSSSFQAHQGV-- 401

Query: 356 SNLTYGGESPV-CEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLR-KA 413
               + GE P  CE C  +F+ +  Y VH        P      G   + + Y  +  KA
Sbjct: 402 ----HTGEKPYKCEECGKSFRMKIHYQVHLVVHTGEKPYKCEVCGKGFRQSSYLKIHLKA 457

Query: 414 KQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQL-------LKM 466
               K   C  C + F+     + H     G K  K  + G+G      L          
Sbjct: 458 HSVEKPYKCEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGE 517

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FS 522
           KPY CE C K ++    LLTH  +HSGE  ++C+ C K F  S  L+ H + H     + 
Sbjct: 518 KPYNCEECGKVFSQASHLLTHQRVHSGEKPFKCEECGKSFSRSSHLQAHQKVHTGEKPYK 577

Query: 523 CDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL 582
           C+EC    + +  L MH     G K   C +C   F+  + L  H +  H  +   KC +
Sbjct: 578 CEECGKGFKWILNLDMHQRVHTGEKPYKCGECGKHFSQASSLQLHQSV-HTGEKPYKCDV 636

Query: 583 CNVV 586
           C  V
Sbjct: 637 CGKV 640

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|296477336|tpg|DAA19451.1| TPA: zinc finger protein 107 [Bos taurus]

 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 209/514 (40%), Gaps = 81/514 (15%)

Query: 80  AMVTCHTAVHQA-TPWQ-EVPGSIPSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKM 137
           A +  H  +H    P++ +V G   SQ  N  +      G    K  +C  CD  F    
Sbjct: 95  AKLRLHQKIHTGEKPYKCDVCGKAFSQTANLAVHQRVHTGE---KPYKCNVCDKAFSDTS 151

Query: 138 RHTFHLQ-HHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNK 196
             T H + H  E P       ++C  CG  F+   K  L+ H   IH  +   KC +C +
Sbjct: 152 SLTVHRRVHTGEKP-------YKCDICGKAFSRNCK--LQLHQR-IHTGEKPYKCNVCER 201

Query: 197 ENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS 256
             F +  SLS+H R H  V+ Y+C+IC + F   ++L  H   H   KP+KC++CG   +
Sbjct: 202 A-FSHTSSLSVHRRLHTGVKPYKCDICGRAFSQTASLALHRSIHTGEKPYKCDVCGKAFN 260

Query: 257 RASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFY 316
           + ++LR H + H+        +   KC  C + F S+   L  H +++H           
Sbjct: 261 QTAKLRLHRRIHT-------GEKPYKCCVCGKAF-SHTTGLELH-QRIHTG--------- 302

Query: 317 DVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPV-CEPCNLTFK 375
                        + + C +CDK   H + L +H++L      + GE P  C+ C   F 
Sbjct: 303 ------------EKPYKCNVCDKAFSHSSNLTVHRRL------HAGEKPYKCDICGKGFS 344

Query: 376 NEWQYLVHNRA-VHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKEN 434
                 VH R    E P + ++   +  Q       +K     KS  C VC KAFS   N
Sbjct: 345 VSSSLAVHQRVHTGEKPYKCDTCGKAFNQTAKLGLHQKIHTGEKSYKCDVCGKAFSRTGN 404

Query: 435 CKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGE 494
              H          +   +GE           KPY C++C K + V  +L  H  +H+GE
Sbjct: 405 LTVH----------RRVHTGE-----------KPYKCDMCGKAFRVSSNLAVHQRVHTGE 443

Query: 495 F-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVECQDLNALRMHTLREHGYKILA 550
             Y+CDVC K F  +  L  H R H     + CD C         L++H     G K   
Sbjct: 444 KPYKCDVCGKAFSQATGLAVHQRIHTGEKPYKCDVCGKAFNHTTRLQLHQRIHTGEKPYK 503

Query: 551 CEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCN 584
           C  CD  F   A L+ H    H  +   KC +C 
Sbjct: 504 CNVCDKAFISAANLSVHRKL-HTGEKPYKCDICG 536

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260824663|ref|XP_002607287.1| hypothetical protein BRAFLDRAFT_125176 [Branchiostoma floridae] gi|229292633|gb|EEN63297.1| hypothetical protein BRAFLDRAFT_125176 [Branchiostoma floridae]

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 197/479 (41%), Gaps = 105/479 (21%)

Query: 115 RVGNISL--KIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILK 172
           +VGN S   +  +C ECD  F  +   T H++ H  +        + C ECG  F     
Sbjct: 15  KVGNGSATPRTHKCNECDREFGKRNYLTKHMKTHTGEKS------YRCEECGKTFRQSG- 67

Query: 173 HSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKST 232
             L+ H+   H  +   KC  C+++ F    +L  HMR H   + Y+CEICKK+F +  +
Sbjct: 68  -GLQRHMR-THTGETPYKCEECDRQ-FNTITNLKTHMRTHTGEKPYQCEICKKRFAHIDS 124

Query: 233 LKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPS 292
           LK H  +H   KPFKCE+CG+  S+    R HLK H    S  K   C KC K       
Sbjct: 125 LKIHVRNHNGEKPFKCEVCGNQFSQ----RPHLKTHMATHSGAKPYQCDKCKK------- 173

Query: 293 NEENLRKHFE-KVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHK 351
                R+    KVH      E                 + + CE C K S     L +H 
Sbjct: 174 ---RFRQSSHLKVHMRTHTGE-----------------KPYTCEECGKQSTTLEGLLVHT 213

Query: 352 KLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPL 410
           ++      + GE P  CE C+  F    Q   H                +     PY   
Sbjct: 214 RV------HTGEKPYKCEECSKQFVTLSQLKFH--------------MSTHTGEKPY--- 250

Query: 411 RKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYT 470
                      C  C+K F+++ + K H  R H         +GE           KPYT
Sbjct: 251 ----------NCEECDKRFATRSSLKLHM-RTH---------TGE-----------KPYT 279

Query: 471 CEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDNFS----CDE 525
           CE CSK +T    L  H   H+GE  Y C+ C  +F SS TL+ H  R         C+E
Sbjct: 280 CEECSKQFTSMSHLKAHMRTHTGEKPYSCERCGTQFTSSSTLKTHIMRAHTGEKPHHCEE 339

Query: 526 CSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCN 584
           C  +   L+ L++H     G K+  CE+C+ +F+  + L  HI T H  +   KC+ C+
Sbjct: 340 CDKQFVSLSDLKVHMRTHPGEKLYKCEECEKQFSSPSYLKAHIRT-HTGEKPYKCEECD 397

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328711363|ref|XP_001946669.2| PREDICTED: zinc finger protein 845-like [Acyrthosiphon pisum]

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 184/431 (42%), Gaps = 42/431 (9%)

Query: 175 LETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLK 234
           LE H+   H  +    C +C+K +F  + +L  H+R H   + Y C++C+K F + STL 
Sbjct: 32  LENHIR-THTGEKPYSCDVCDK-SFSQRGTLEYHLRTHTGEKPYPCDVCEKTFGSSSTLT 89

Query: 235 EHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNE 294
           +H  +H   KP+ C++C      +S L  H + H    +  K  +C  C K      +  
Sbjct: 90  KHRRTHTGEKPYPCDVCDKTFGSSSTLTEHRRTH----TGEKPYSCDVCDKTFGSSGTLT 145

Query: 295 ENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIV--QYFLCELCDKTSIHYTYLCLHKK 352
           ++ R H  +  +  +  +  F        +R      + + C++CDKT    + L  H++
Sbjct: 146 KHRRTHTGEKPYPCDVCDKTFGSSSTLTEHRRTHTGEKPYPCDVCDKTFGSSSNLTEHRR 205

Query: 353 LKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRAVHELPPEP------NSGAGSVLQNN 405
                 T+ GE P  C+ C+ TF +      H R      P P        G+ S L  +
Sbjct: 206 ------THTGEKPYPCDVCDKTFGSSSNLTEHRRTHTGEKPYPCDVCDKTFGSSSTLTKH 259

Query: 406 PYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEP-------KEPKSGEGLP 458
                R+     K  +C VC+K F S  N   H  R H  ++P       K   S   L 
Sbjct: 260 -----RRTHTGEKPYSCDVCDKTFGSSSNLTKHR-RTHTGEKPYSCDVCDKTFGSSSNLT 313

Query: 459 ALEQL-LKMKPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTR 516
              +     KPY C++C KT+    +L  H   H+GE  Y CDVC K F SS TL  H R
Sbjct: 314 KHRRTHTGEKPYPCDVCDKTFGSSNTLTEHRRTHTGEKPYPCDVCDKTFGSSGTLTKHRR 373

Query: 517 RHDN---FSCDECSVECQDLNALRMHTLREH-GYKILACEKCDVKFTHKALLAEHINTKH 572
            H     + CD C         L  H LR H G K  +C+ CD  F+ +  L  H+ T H
Sbjct: 374 THTGEKPYPCDVCDKSFSQRGTLEYH-LRTHTGNKPYSCDVCDKSFSQRGTLEYHLRT-H 431

Query: 573 NTDVTLKCQLC 583
             +    C +C
Sbjct: 432 TGEKPYPCDVC 442

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	597
UNIPROTKB|Q4V348	819	ZNF658B "Zinc finger protein 6	0.793	0.578	0.273	3.5e-42
ZFIN|ZDB-GENE-060531-126	981	si:dkey-261j4.5 "si:dkey-261j4	0.726	0.442	0.280	3.8e-42
UNIPROTKB|Q14588	700	ZNF234 "Zinc finger protein 23	0.731	0.624	0.281	6.8e-42
UNIPROTKB|F1N5W2	922	ZNF226 "Uncharacterized protei	0.725	0.469	0.288	1.1e-41
UNIPROTKB|P17038	809	ZNF43 "Zinc finger protein 43"	0.839	0.619	0.281	4.1e-41
UNIPROTKB|Q5TYW1	1059	ZNF658 "Zinc finger protein 65	0.793	0.447	0.271	4.3e-41
UNIPROTKB|Q05481	1191	ZNF91 "Zinc finger protein 91"	0.731	0.366	0.295	5.6e-41
UNIPROTKB|J9NSQ5	1029	ZNF197 "Uncharacterized protei	0.864	0.501	0.261	2.9e-40
UNIPROTKB|Q17RR6	527	ZNF569 "ZNF569 protein" [Homo	0.726	0.823	0.276	5.3e-40
UNIPROTKB|F1RKN0	686	ZNF569 "Uncharacterized protei	0.700	0.609	0.290	5.7e-39

UNIPROTKB|Q4V348 ZNF658B "Zinc finger protein 658B" [Homo sapiens (taxid:9606)]

 Score = 454 (164.9 bits), Expect = 3.5e-42, P = 3.5e-42
 Identities = 141/516 (27%), Positives = 205/516 (39%)

Query:    85 HTAVHQATPWQEVPGSI----PSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHT 140
             H +VHQ     E P        S   N  +    R+ +   K   C +C+  F       
Sbjct:   320 HLSVHQRVHTGEKPYECNDCGKSFTYNSALRAHQRI-HTGEKPYECSDCEKTFAHNSALR 378

Query:   141 FHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFK 200
              H  H +   + P    +EC ECG  FA I    L+ H   IH ++   +C  C + +F 
Sbjct:   379 AH--HRIHTGEKP----YECNECGRSFAHI--SVLKAHQR-IHTREKPYECNECGR-SFT 428

Query:   201 NQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASR 260
                +L  H R H   + YEC  C+K F + S LK H   H   KP+KC  C    +  S 
Sbjct:   429 YNSALRAHQRIHTGRKPYECSDCEKTFAHNSALKIHQRIHTGEKPYKCNECEKTFAHNSA 488

Query:   261 LRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHF-EKVHFDLEFDEAHFYDVV 319
             LRAH   H+      K+  C +C K          + R H  EK +   +  +       
Sbjct:   489 LRAHQNIHT----GEKLYECSECGKTFFQKTRLSTHRRIHTGEKPYECSKCGKTFSQKSY 544

Query:   320 LKCVYRFRIVQY-FLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPV-CEPCNLTFKNE 377
             L    R    +  + C +C KT ++   L +H+++ H+     GE P  C  C  TF   
Sbjct:   545 LSGHERIHTGEKPYECNVCGKTFVYKAALIVHQRI-HT-----GEKPYECNECGKTFSQR 598

Query:   378 WQYLVHNRAVH--ELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENC 435
                  H R +H  E P E N    +   N+      +     K   C+ C K FS   + 
Sbjct:   599 THLCAHQR-IHTGEKPYECNECGKTFADNSALRAHHRIHTGEKPYECNDCGKTFSKTSHL 657

Query:   436 KAHYTRQHGNK-----EPKEPKSGEGLPALEQLLKM--KPYTCEICSKTYTVEGSLLTHY 488
             +AH   + G K     E  +  S +   +  Q +    KPY C +C K +    +L  H 
Sbjct:   658 RAHLRTRSGEKPYECSECGKTFSEKSYVSAHQRVHTGEKPYECNVCGKPFAHNSTLRVHQ 717

Query:   489 DMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVECQDLNALRMHTLREH 544
              +H+GE  Y+C+ C K F     L  H R H     + C+EC       + LR+H     
Sbjct:   718 RIHTGEKSYECNDCGKTFSQKSHLSAHQRIHTGEKPYECNECGKAFAQNSTLRVHQRIHT 777

Query:   545 GYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKC 580
             G K   C++C   F  KA L  H    H  + TL C
Sbjct:   778 GEKPYECDECGKTFVRKAALRVHHTRMHTREKTLAC 813

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-060531-126 si:dkey-261j4.5 "si:dkey-261j4.5" [Danio rerio (taxid:7955)]

 Score = 456 (165.6 bits), Expect = 3.8e-42, P = 3.8e-42
 Identities = 136/484 (28%), Positives = 215/484 (44%)

Query:   126 CEECDINFPSKMRHTFHLQHHL-EDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHV 184
             C++C  +F SK     H+  H  E P       H+C +CG  F    K  ++ H+  IH 
Sbjct:   374 CDQCGKSFRSKGEVKIHMLIHTGEKP-------HKCDQCGKSFRS--KGEVKIHM-LIHT 423

Query:   185 QDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVK 244
              +   +C  C K +F+++  + IHM  H   + +EC+ C K F +K  +K+H   H  +K
Sbjct:   424 GEKPHECDQCGK-SFRSKGEVKIHMLIHTRKKPHECDQCGKSFRSKGEVKQHMSIHTGLK 482

Query:   245 PFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKV 304
             P+KCE CG + ++ + L+ H+K H+      K   C +C KC   FP  +++L+ H E +
Sbjct:   483 PYKCEECGKFFAQKNNLQVHMKVHT----GEKPYRCDQCGKC---FPY-KQSLKLHLE-I 533

Query:   305 HFD---LEFDEA-HFYDVVLKCVYRFRI-VQY--FLCELCDKTSIHYTYLCLHKKLKHSN 357
             H        DE    +   L+      +  +Y  + C+ C+K+     +L  H KL H+ 
Sbjct:   534 HAKGNPYTCDECGKSFKTCLQFRSHMTLHPEYKPYKCDQCEKSYGREDHLQRHMKL-HT- 591

Query:   358 LTYGGESP-VCEPCNLTFKNEWQYLVHNRAVH-ELPPEP--NSGAGSVLQNNPYPPLRKA 413
                 GE P  CE C  +F      L  +  VH E+ P      G G  L+   Y      
Sbjct:   592 ----GEKPHKCEHCGKSFPMR-DLLRSHLMVHREVKPYTCDQCGKGFTLKKC-YNEHMNI 645

Query:   414 KQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLP---ALEQLLKM---- 466
                 +  TC  C K F  +++   H     G K     + G+      A    +K+    
Sbjct:   646 HTGERPYTCDQCGKGFPYEQSLNLHMRFHRGEKPFTCDQCGQSFSQKGAYNIHMKIHTGE 705

Query:   467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN-FSCD 524
             KPYTC+ C  ++    SL  H   H+GE  + CD C K + +++ L+NH + H + + CD
Sbjct:   706 KPYTCDQCGMSFRHGSSLKLHMTHHTGEKPFHCDQCDKCYSTALFLKNHMKTHKSIYKCD 765

Query:   525 ECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCN 584
              C         L+ HT    G K  AC +C  +F   + L +H+ T H  +   KC  C 
Sbjct:   766 RCGKSFTRKERLKEHTRIHTGEKPFACAQCGKRFGCSSNLKQHMMT-HTGEKPHKCDQCG 824

Query:   585 VVVL 588
                L
Sbjct:   825 KTFL 828

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q14588 ZNF234 "Zinc finger protein 234" [Homo sapiens (taxid:9606)]

 Score = 448 (162.8 bits), Expect = 6.8e-42, P = 6.8e-42
 Identities = 135/479 (28%), Positives = 203/479 (42%)

Query:   126 CEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQ 185
             C+EC  +F        H + H+ +        ++C  CG +F+    H L+TH   +H  
Sbjct:   178 CDECGKSFCYISALHIHQRVHMGEK------CYKCDVCGKEFSQS-SH-LQTHQR-VHTV 228

Query:   186 DNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKP 245
             +   KC  C K  F  + +L++H + H   + Y CE C + FI+ S L+EH   H   KP
Sbjct:   229 EKPFKCVECGK-GFSRRSTLTVHCKLHSGEKPYNCEECGRAFIHASHLQEHQRIHTGEKP 287

Query:   246 FKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHF-EKV 304
             FKC+ CG    R S L  H   H+      K ++C KCF C      ++   R H  EK 
Sbjct:   288 FKCDTCGKNFRRRSALNNHCMVHTG-EKPYKCEDCGKCFTCSSNLRIHQ---RVHTGEKP 343

Query:   305 HFDLEFDEAHFYDVVLKCVYRFRIVQY-FLCELCDKTSIHYTYLCLHKKLKHSNLTYGGE 363
             +   E  +        +   R    +  ++C++C K  I+ +    H+ + H+     GE
Sbjct:   344 YKCEECGKCFIQPSQFQAHRRIHTGEKPYVCKVCGKGFIYSSSFQAHQGV-HT-----GE 397

Query:   364 SPV-CEPCNLTFKNEWQYLVHNRAVHE-LPPEPNSGAGSVLQNNPYPPLR-KAKQHVKSV 420
              P  C  C  +F+ +  Y VH   VH    P      G   + + Y  +  KA    K  
Sbjct:   398 KPYKCNECGKSFRMKIHYQVH-LVVHTGEKPYKCEVCGKAFRQSSYLKIHLKAHSVQKPF 456

Query:   421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKM--------KPYTCE 472
              C  C + F+     + H     G K  K  + G+G      L K+        KPY CE
Sbjct:   457 KCEECGQGFNQSSRLQIHQLIHTGEKPYKCEECGKGFSRRADL-KIHCRIHTGEKPYNCE 515

Query:   473 ICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSV 528
              C K ++    LLTH  +HSGE  ++C+ C K F  S  L+ H + H     + C EC  
Sbjct:   516 ECGKVFSQASHLLTHQRVHSGEKPFKCEECGKSFSRSAHLQAHQKVHTGEKPYKCGECGK 575

Query:   529 ECQ-DLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVV 586
               +  LN L MH     G K   C +C   F+  + L  H  + H  +   KC +C  V
Sbjct:   576 GFKWSLN-LDMHQRVHTGEKPYTCGECGKHFSQASSLQLH-QSVHTGEKPYKCDVCGKV 632

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|F1N5W2 ZNF226 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 451 (163.8 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 139/481 (28%), Positives = 203/481 (42%)

Query:   125 RCEECDINFPSKMRHTFHLQHHL-EDPDLPVNFMHECRECGSQFADILKHSLETHLSFIH 183
             +CEEC   F        H + H  E P       ++C ECG  F+     SL+ H   IH
Sbjct:   368 KCEECGKGFICSSNLYIHQRVHTGEKP-------YKCEECGKGFSR--PSSLQAHQG-IH 417

Query:   184 VQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSV 243
               +    C +C K  F    +L  H R H   + Y+CE C K F   S  + H V H   
Sbjct:   418 TGEKSYVCNVCGK-GFTLSSNLQAHQRVHTGEKPYKCEECGKNFRRNSHYQVHLVVHTGE 476

Query:   244 KPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHF-- 301
             KP+KCE+CG   S++S L+ H KAHSV     K   CK+C    Q F  N   L+ H   
Sbjct:   477 KPYKCEVCGKGFSQSSYLQIHQKAHSV----EKPYKCKECG---QGFNQNSR-LQIHQLI 528

Query:   302 ---EKVHFDLEFDEAHFYDVVLKCVYRFRIVQY-FLCELCDKTSIHYTYLCLHKKLKHSN 357
                EK +   E  +       LK   R    +  + CE C K     + L  H+++ HS 
Sbjct:   529 HTGEKPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEECGKVFRQASNLLAHQRV-HS- 586

Query:   358 LTYGGESPV-CEPCNLTFKNEWQYLVHNRAVH--ELPPEPNSGAGSVLQNNPYPPLRKAK 414
                 GE P  CE C  +F        H + VH  E P +         Q++ +   ++  
Sbjct:   587 ----GEKPFKCEECGKSFGRSSHLQAHQK-VHTGEKPYKCEECGKGFNQSSNFQCHQRVH 641

Query:   415 QHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPA-----LEQLLKM--K 467
                K   C  C K F    N + H     G K  K  + G+G        + Q +    K
Sbjct:   642 TEEKPYKCEECGKGFGWSVNLRVHQRVHRGEKPYKCEECGKGFTQAAHYHIHQRVHTGEK 701

Query:   468 PYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSC 523
             PY C+ C K ++   +L  H ++H+GE  ++C+ C K F  S  L+ H R H     + C
Sbjct:   702 PYKCDECGKGFSQASNLQVHQNVHTGEKRFKCETCGKGFSQSSKLQTHQRVHTGEKPYRC 761

Query:   524 DECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC 583
             D C  +    + L++H +   G K   CE C   F+ ++ L  H    H+ +   KC+ C
Sbjct:   762 DVCGKDFSYSSNLKLHQVIHTGEKPYTCEACGKGFSWRSNLHAHQRV-HSGEKPYKCEAC 820

Query:   584 N 584
             +
Sbjct:   821 D 821

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|P17038 ZNF43 "Zinc finger protein 43" [Homo sapiens (taxid:9606)]

 Score = 444 (161.4 bits), Expect = 4.1e-41, P = 4.1e-41
 Identities = 155/551 (28%), Positives = 225/551 (40%)

Query:    56 RKRPHKKKKAR--LLK-EEVPVVMVRQAMVTCHTAVHQATPWQEVPGSIPSQAMNPTM-L 111
             R   HKK   R  L K EE      + +++T H  +     + +      ++A N +  L
Sbjct:   244 RLTTHKKNYTRYKLYKCEECGKAFNKSSILTTHKIIRTGEKFYKCKEC--AKAFNQSSNL 301

Query:   112 TTTRVGNISLKIPRCEECD--INFPSKMRHTFHLQHHL-EDPDLPVNFMHECRECGSQFA 168
             T  +  +   K  +CEEC    N+PS +  T H + H  E P       + C ECG  F 
Sbjct:   302 TEHKKIHPGEKPYKCEECGKAFNWPSTL--TKHKRIHTGEKP-------YTCEECGKAFN 352

Query:   169 DILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFI 228
                  +L TH   IH  +   KCT C  E F    +L+ H + H   + Y+CE C K F 
Sbjct:   353 QF--SNLTTHKR-IHTAEKFYKCTECG-EAFSRSSNLTKHKKIHTEKKPYKCEECGKAFK 408

Query:   229 NKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQ 288
               S L EH ++H   KP+KCE CG   +  S L  H + H+      K   C+ C K   
Sbjct:   409 WSSKLTEHKLTHTGEKPYKCEECGKAFNWPSTLTKHNRIHT----GEKPYKCEVCGKAFN 464

Query:   289 VFPSNEENLRKHF-EKVHFDLEFDEAHFYDVVLKCVYRFRIVQY-FLCELCDKTSIHYTY 346
              F +   + R H  EK +   E  +A      L    +  I +  + CE C K     + 
Sbjct:   465 QFSNLTTHKRIHTAEKPYKCEECGKAFSRSSNLTKHKKIHIEKKPYKCEECGKAFKWSSK 524

Query:   347 LCLHKKLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRAVH--ELPPEPNSGAGSVLQ 403
             L  HK      +T+ GE P  CE C   F N +  L  ++ +H  E P +      +  Q
Sbjct:   525 LTEHK------ITHTGEKPYKCEECGKAF-NHFSILTKHKRIHTGEKPYKCEECGKAFTQ 577

Query:   404 NNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQL 463
             ++     +K     K   C  C KAF+   N   H     G K  K  + G+       L
Sbjct:   578 SSNLTTHKKIHTGEKFYKCEECGKAFTQSSNLTTHKKIHTGGKPYKCEECGKAFNQFSTL 637

Query:   464 LKMK-------PYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHT 515
              K K       PY CE C K +    +L  H  +H+GE  Y+C+ C K F+ S TL  H 
Sbjct:   638 TKHKIIHTEEKPYKCEECGKAFKWSSTLTKHKIIHTGEKPYKCEECGKAFKLSSTLSTHK 697

Query:   516 RRHDN---FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKH 572
               H     + C++C       + L  H     G +   CE+C   F + + L  H    H
Sbjct:   698 IIHTGEKPYKCEKCGKAFNRSSNLIEHKKIHTGEQPYKCEECGKAFNYSSHLNTHKRI-H 756

Query:   573 NTDVTLKCQLC 583
               +   KC+ C
Sbjct:   757 TKEQPYKCKEC 767

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q5TYW1 ZNF658 "Zinc finger protein 658" [Homo sapiens (taxid:9606)]

 Score = 447 (162.4 bits), Expect = 4.3e-41, P = 4.3e-41
 Identities = 140/516 (27%), Positives = 204/516 (39%)

Query:    85 HTAVHQATPWQEVPGSI----PSQAMNPTMLTTTRVGNISLKIPRCEECDINFPSKMRHT 140
             H +VHQ     E P        S   N  +    R+ +   K   C +C+  F       
Sbjct:   560 HLSVHQRVHTGEKPYECNDCGKSFTYNSALRAHQRI-HTGEKPYECSDCEKTFAHNSALR 618

Query:   141 FHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFK 200
              H  H +   + P    +EC ECG  FA I    L+ H   IH  +   +C  C + +F 
Sbjct:   619 AH--HRIHTGEKP----YECNECGRSFAHI--SVLKAHQR-IHTGEKPYECNECGR-SFT 668

Query:   201 NQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASR 260
                +L  H R H   + YEC  C+K F + S LK H   H   KP++C  C    +  S 
Sbjct:   669 YNSALRAHQRIHTGRKPYECSDCEKTFAHNSALKIHQRIHTGEKPYECNECEKTFAHNSA 728

Query:   261 LRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHF-EKVHFDLEFDEAHFYDVV 319
             LRAH   H+      K+  C +C K          + R H  EK +   +  +       
Sbjct:   729 LRAHQNIHT----GEKLYECSECGKTFFQKTRLSTHRRIHTGEKPYECSKCGKTFSQKSY 784

Query:   320 LKCVYRFRIVQY-FLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPV-CEPCNLTFKNE 377
             L    R    +  + C +C KT ++   L +H+++ H+     GE P  C  C  TF   
Sbjct:   785 LSGHERIHTGEKPYECNVCGKTFVYKAALIVHQRI-HT-----GEKPYECNQCGKTFSQR 838

Query:   378 WQYLVHNRAVH--ELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENC 435
                  H R +H  E P E N    +   N+      +     K   C+ C K FS   + 
Sbjct:   839 THLCAHQR-IHTGEKPYECNECGKTFADNSALRAHHRIHTGEKPYECNDCGKTFSKTSHL 897

Query:   436 KAHYTRQHGNK-----EPKEPKSGEGLPALEQLLKM--KPYTCEICSKTYTVEGSLLTHY 488
             +AH   + G K     E  +  S +   +  Q +    KPY C +C K +    +L  H 
Sbjct:   898 RAHLRTRSGEKPYECSECGKTFSEKSYVSAHQRVHTGEKPYECNVCGKPFAHNSTLRVHQ 957

Query:   489 DMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVECQDLNALRMHTLREH 544
              +H+GE  Y+C+ C K F     L  H R H     + C+EC       + LR+H     
Sbjct:   958 RIHTGEKSYECNDCGKTFSQKSHLSAHQRIHTGEKPYECNECGKAFAQNSTLRVHQRIHT 1017

Query:   545 GYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKC 580
             G K   C++C   F  KA L  H    H  + TL C
Sbjct:  1018 GEKPYECDECGKTFVRKAALRVHHTRMHTREKTLAC 1053

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q05481 ZNF91 "Zinc finger protein 91" [Homo sapiens (taxid:9606)]

 Score = 447 (162.4 bits), Expect = 5.6e-41, P = 5.6e-41
 Identities = 144/487 (29%), Positives = 206/487 (42%)

Query:   119 ISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETH 178
             I+ K  +C+EC+  F      T H + H ED   P    ++C ECG  F  +   +L TH
Sbjct:   205 ITEKSCKCKECEKTFHWSSTLTNHKEIHTEDK--P----YKCEECGKAFKQL--STLTTH 256

Query:   179 LSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSV 238
                I  ++   KC  C K  F    +L+ H R H   + Y+CE C K F + STL +H  
Sbjct:   257 -KIICAKEKIYKCEECGKA-FLWSSTLTRHKRIHTGEKPYKCEECGKAFSHSSTLAKHKR 314

Query:   239 SHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLR 298
              H   KP+KCE CG   SR+S L  H + H+      K   CK+C K    F SN   L 
Sbjct:   315 IHTGEKPYKCEECGKAFSRSSTLAKHKRIHT----GEKPYKCKECGKA---F-SNSSTLA 366

Query:   299 KHF-----EKVHFDLEFDEAHFYDVVLKCVYRFRIV----QYFLCELCDKTSIHYTYLCL 349
              H      EK +   E D+A F    L  + + +I+    + + CE C K     + L +
Sbjct:   367 NHKITHTEEKPYKCKECDKA-FKR--LSTLTKHKIIHAGEKLYKCEECGKAFNRSSNLTI 423

Query:   350 HKKLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNRA-VHELPPEPNSGAGSVLQNNPY 407
             HK + H+     GE P  CE C   F        H R    E P +      + + ++  
Sbjct:   424 HKFI-HT-----GEKPYKCEECGKAFNWSSSLTKHKRFHTREKPFKCKECGKAFIWSSTL 477

Query:   408 PPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMK 467
                ++     K   C  C KAF        H     G K  K  + G+       L K K
Sbjct:   478 TRHKRIHTGEKPYKCEECGKAFRQSSTLTKHKIIHTGEKPYKFEECGKAFRQSLTLNKHK 537

Query:   468 -------PYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHD 519
                    PY C+ C K +    +L TH  +H+G+  Y+C+ C K F  S +L  H   H 
Sbjct:   538 IIHSREKPYKCKECGKAFKQFSTLTTHKIIHAGKKLYKCEECGKAFNHSSSLSTHKIIHT 597

Query:   520 ---NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDV 576
                ++ C+EC       + LR H     G K   CE+C   F+H + LA+H    H  + 
Sbjct:   598 GEKSYKCEECGKAFLWSSTLRRHKRIHTGEKPYKCEECGKAFSHSSALAKHKRI-HTGEK 656

Query:   577 TLKCQLC 583
               KC+ C
Sbjct:   657 PYKCKEC 663

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

UNIPROTKB|J9NSQ5 ZNF197 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 439 (159.6 bits), Expect = 2.9e-40, P = 2.9e-40
 Identities = 149/570 (26%), Positives = 228/570 (40%)

Query:    40 LPRAQPKRLGDDDILLRKRPHKKKKARLLKEEVPVVMVRQAM-VTCHTAVHQATPWQEVP 98
             L   + KR+ +D   +R++  K K A  +K E       +++  +    +HQ    +++ 
Sbjct:   161 LENPEGKRMKEDKSGMREKIGKAKNAANIKTEQEDEASEESLHPSSKHVIHQTVSVEQI- 219

Query:    99 GSIPSQAMNPTMLTTTRVG-----NISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLP 153
              S   + M   +  T+  G     +I  K  +C+EC  +F    R   H   H  +    
Sbjct:   220 SSEQDKCME-NINGTSHPGLQQKTSIVKKSHKCDECGKSFKYNSRLVQHKIMHTGEK--- 275

Query:   154 VNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHE 213
                 +EC +CG  F      SL  H   IH  +   KC  C K  + +  SL  H   H 
Sbjct:   276 ---RYECEDCGGTFRS--SSSLRVHKR-IHTGEKPYKCEECGKA-YMSYSSLINHKSTHS 328

Query:   214 NVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVAS 273
               +  +C+ C K F   S L +H   H   KP++C  CG     +S LR H + H+    
Sbjct:   329 GEKNCKCDECGKSFNYSSVLDQHKRIHTGEKPYECGECGKAFRNSSGLRVHKRIHT---- 384

Query:   274 NNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFD---LEFDEAHFYDVVLKCVYRFRIVQ 330
               K   C  C K    F SN   LR H +++H      E DE     +  + +   + + 
Sbjct:   385 GEKPYECDICGK---TF-SNSSGLRVH-KRIHTGEKPYECDECGKAFITCRTLLNHKSIH 439

Query:   331 Y----FLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPV-CEPCNLTFKNEWQYLVHNR 385
             +    + C+ C+K S +Y+ L    K+ H+     GE P  C+ C   F+N    +VH R
Sbjct:   440 FGDKPYKCDECEK-SFNYSSLLTQHKVIHT-----GEKPYECDECGKAFRNSSGLIVHKR 493

Query:   386 AVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSV-TCSVCEKAFSSKENCKAHYTRQHG 444
                   P      G     +    + K+    K    C  C K+FS       H T   G
Sbjct:   494 IHTGEKPYKCDVCGKAFSYSSGLAVHKSIHPGKKAHECKECGKSFSYNSLLLQHKTIHTG 553

Query:   445 NKE------PKEPKSGEGLPALEQL-LKMKPYTCEICSKTYTVEGSLLTHYDMHSGEF-Y 496
              +        K  ++  GL    +L    KPY C++C K Y    SL  H  +H GE  Y
Sbjct:   554 ERPYVCDLCGKTFRNNSGLKVHRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHLGEKPY 613

Query:   497 QCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVECQDLNALRMHTLREHGYKILACEK 553
             +C  C K F  S  L  H R H     F CDEC    ++ + L++H     G +   CE+
Sbjct:   614 KCTYCEKSFNYSSALEQHKRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTGERPYKCEE 673

Query:   554 CDVKFTHKALLAEHINTKHNTDVTLKCQLC 583
             C   +   + L  H  + H  +   KC  C
Sbjct:   674 CGKAYISLSSLINH-KSVHPGEKPYKCDEC 702

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q17RR6 ZNF569 "ZNF569 protein" [Homo sapiens (taxid:9606)]

 Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
 Identities = 132/478 (27%), Positives = 195/478 (40%)

Query:   125 RCEECDINFPSKMRHTFHLQHHL-EDPDLPVNFMHECRECGSQFADILKHSLETHLSFIH 183
             +C  C   F   +    HL+ H  E P       +EC  C   F+   K  L  H   IH
Sbjct:    28 KCNHCGKGFNQTLDLIRHLRIHTGEKP-------YECSNCRKAFSH--KEKLIKHYK-IH 77

Query:   184 VQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSV 243
              ++   KC  C K  F    +L  H R H   + Y C+ C+K F  KS L +H   H   
Sbjct:    78 SREQSYKCNECGKA-FIKMSNLIRHQRIHTGEKPYACKECEKSFSQKSNLIDHEKIHTGE 136

Query:   244 KPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEK 303
             KP++C  CG   S+   L AH K H+      K   C +C K      S   ++R H  +
Sbjct:   137 KPYECNECGKAFSQKQSLIAHQKVHT----GEKPYACNECGKAFPRIASLALHMRSHTGE 192

Query:   304 VHFDLEFDEAHFYDVVLKCVY-RFRIVQY-FLCELCDKTSIHYTYLCLHKKLKHSNLTYG 361
               +  +     F    +  ++ R    +  + C  C K     + L +H +  H+     
Sbjct:   193 KPYKCDKCGKAFSQFSMLIIHVRIHTGEKPYECNECGKAFSQSSALTVHMR-SHT----- 246

Query:   362 GESPV-CEPCNLTFKNEWQYLVHNRAVH--ELPPEPNSGAGSVLQNNPYPPLRKAKQHVK 418
             GE P  C+ C   F ++  ++ H + +H  E P E N    + +Q +     ++     K
Sbjct:   247 GEKPYECKECRKAFSHKKNFITHQK-IHTREKPYECNECGKAFIQMSNLVRHQRIHTGEK 305

Query:   419 SVTCSVCEKAFSSKENCKAHYTRQHGNKEPKE-PKSGEGLPALEQLL---KM----KPYT 470
                C  C KAFS K N  AH  + H  ++P E  + G+     +  +   K+    KPY 
Sbjct:   306 PYICKECGKAFSQKSNLIAH-EKIHSGEKPYECNECGKAFSQKQNFITHQKVHTGEKPYD 364

Query:   471 CEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDEC 526
             C  C K ++   SL  H   H+GE  Y+CD C K F     L  H R H     + C+EC
Sbjct:   365 CNECGKAFSQIASLTLHLRSHTGEKPYECDKCGKAFSQCSLLNLHMRSHTGEKPYVCNEC 424

Query:   527 SVECQDLNALRMHTLREH-GYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC 583
                     +L +H +R H G K   C KC   F+  + L  HI   H  +    C  C
Sbjct:   425 GKAFSQRTSLIVH-MRGHTGEKPYECNKCGKAFSQSSSLTIHIRG-HTGEKPFDCSKC 480

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1RKN0 ZNF569 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 431 (156.8 bits), Expect = 5.7e-39, P = 5.7e-39
 Identities = 134/461 (29%), Positives = 198/461 (42%)

Query:   126 CEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQ 185
             C EC   F  KM +    Q  +   + P    + C+ECG  F+   K +L  H   IH  
Sbjct:   244 CNECGKAF-IKMSNLIRHQR-IHTGEKP----YACKECGKSFSQ--KSNLIDHEK-IHTG 294

Query:   186 DNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKP 245
             +   +C  C K  F  + SL  H + H   + Y C  C K F   ++L  H  SH   KP
Sbjct:   295 EKPYECNECGKA-FSQKQSLIAHQKVHTGEKPYACNECGKAFPRIASLALHMRSHTGEKP 353

Query:   246 FKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHF-EKV 304
             +KC+ CG   S+ S L  H++ H+      K   C +C K      +   ++R H  EK 
Sbjct:   354 YKCDKCGKAFSQFSMLIIHVRIHT----GEKPYECNECGKSFSQSSALTVHMRSHTGEKP 409

Query:   305 HFDLEFDEA--HFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGG 362
             +   E  +A  H  + +       R   Y  C  C K  I  + L  H+++ H+     G
Sbjct:   410 YECKECRKAFSHKKNFITHQKIHTREKPYE-CNECGKAFIQMSNLVRHQRI-HT-----G 462

Query:   363 ESP-VCEPCNLTFKNEWQYLVHNRAVH--ELPPEPNSGAGSVLQNNPYPPLRKAKQHVKS 419
             E P +C+ C   F  +   + H + +H  E P E N    +  Q   +   +K     K 
Sbjct:   463 EKPYICKECGKAFSQKSNLIAHEK-IHSGEKPYECNECGKAFSQKQNFITHQKVHTGEKP 521

Query:   420 VTCSVCEKAFSSKENCKAHYTRQHGNKEPKE-PKSGEGLPALEQL-LKM------KPYTC 471
               C+ C KAFS   +   H  R H  ++P E  K G+       L L M      KPY C
Sbjct:   522 YDCNECGKAFSQIASLTLHL-RSHTGEKPYECDKCGKAFSQCSLLNLHMRSHTGEKPYVC 580

Query:   472 EICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECS 527
               C K ++   SL+ H   H+GE  Y+C+ C K F  S +L  H R H     F C +C 
Sbjct:   581 NECGKAFSQRTSLIVHMRGHTGEKPYECNKCGKAFSQSSSLTIHIRGHTGEKPFDCSKCG 640

Query:   528 VECQDLNALRMHTLREH-GYKILACEKCDVKFTHKALLAEH 567
                  +++L +H +R+H G K   C +C   F+ K+ L  H
Sbjct:   641 KAFSQISSLTLH-MRKHTGEKPYHCNECGKAFSQKSHLVRH 680

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	597
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	0.002

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 40.9 bits (95), Expect = 0.002
 Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 8/98 (8%)

Query: 387 VHELPPEPNSGAGSVLQNNP----YPPLRKAKQHVKSVTCSV--CEKAFSSKENCKAHYT 440
           V +LP   +S  G +          P      +  K   C V  C K + ++   K H  
Sbjct: 313 VRKLPCTNSSSNGKLAHGGERNIDTPSRMLKVKDGKPYKCPVEGCNKKYKNQNGLKYH-- 370

Query: 441 RQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTY 478
             HG++  K  ++           K KPY CE+C K Y
Sbjct: 371 MLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRY 408

Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	597
KOG1074|consensus	958		99.96
KOG2462|consensus	279		99.96
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.94
KOG3608|consensus	467		99.92
KOG3623|consensus	1007		99.92
KOG3608|consensus	467		99.92
KOG3623|consensus	1007		99.9
KOG3576|consensus	267		99.71
KOG3576|consensus	267		99.67
PLN03086	567	PRLI-interacting factor K; Provisional	99.27
PLN03086	567	PRLI-interacting factor K; Provisional	99.16
PHA00733	128	hypothetical protein	99.01
PHA00733	128	hypothetical protein	99.01
PHA02768	55	hypothetical protein; Provisional	98.95
PHA02768	55	hypothetical protein; Provisional	98.89
KOG3993|consensus	500		98.78
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.7
KOG3993|consensus	500		98.65
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.53
PHA00732	79	hypothetical protein	98.39
PHA00616	44	hypothetical protein	98.38
PHA00616	44	hypothetical protein	98.26
PHA00732	79	hypothetical protein	98.25
KOG1146|consensus	1406		97.96
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.88
KOG1146|consensus	1406		97.85
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.81
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.73
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.73
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.65
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.48
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.42
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.41
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.35
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.34
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.27
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.91
KOG2231|consensus	669		96.88
KOG2231|consensus	669		96.86
smart00355	26	ZnF_C2H2 zinc finger.	96.53
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.47
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.43
smart00355	26	ZnF_C2H2 zinc finger.	96.29
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.12
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.02
PRK04860	160	hypothetical protein; Provisional	95.99
PRK04860	160	hypothetical protein; Provisional	95.98
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.91
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.87
KOG2785|consensus	390		95.82
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.66
KOG2482|consensus	423		95.34
KOG2482|consensus	423		95.32
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.3
KOG2785|consensus	390		95.24
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.02
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.83
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.63
KOG2893|consensus	341		92.51
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.1
COG5048	467	FOG: Zn-finger [General function prediction only]	92.02
KOG4173|consensus	253		91.96
COG5048	467	FOG: Zn-finger [General function prediction only]	91.39
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.59
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.57
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.8
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	89.73
COG4049	65	Uncharacterized protein containing archaeal-type C	89.15
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.85
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	87.45
KOG4173|consensus	253		86.75
KOG2893|consensus	341		86.42
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	85.33
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	83.9
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	80.11

>KOG1074|consensus

Probab=99.96  E-value=2.1e-30  Score=259.93  Aligned_cols=114  Identities=26%  Similarity=0.537  Sum_probs=89.0

Q ss_pred             cccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhhcccccCCcccCCccccccccCCCCchHHH
Q psy12199        218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENL  297 (597)
Q Consensus       218 ~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~~C~~C~~c~~~f~~~~~~l  297 (597)
                      -+|-+|-++..-++.|+.|.++|+|||||+|.+||+.|.++++|+.||-+|.....-                       
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~-----------------------  662 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPA-----------------------  662 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccc-----------------------
Confidence            568899999999999999999999999999999999999999999998888522111                       


Q ss_pred             HhhhhhccCccccccccchhhhhcccccccccCeeecC---CCcccccchhhhHhHhhhcccCCCCCC----CC----CC
Q psy12199        298 RKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCE---LCDKTSIHYTYLCLHKKLKHSNLTYGG----ES----PV  366 (597)
Q Consensus       298 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~---~C~~~f~~~~~L~~H~~~~h~~~~~~~----~~----~~  366 (597)
                                                     ...|.|+   +|-+.|.+.-.|..|+++|..+.+-.+    +.    -+
T Consensus       663 -------------------------------R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq  711 (958)
T KOG1074|consen  663 -------------------------------RVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQISNGGTAAEGILAADQ  711 (958)
T ss_pred             -------------------------------cccccCCchhhhcccccccccccceEEeecCCCCCCCcccccccchhcc
Confidence                                           1336777   888888888888888887765444333    22    27


Q ss_pred             CCcCccCCCCHHHHHHHHH
Q psy12199        367 CEPCNLTFKNEWQYLVHNR  385 (597)
Q Consensus       367 C~~C~~~f~~~~~L~~H~~  385 (597)
                      |..|.+.|.....+..++.
T Consensus       712 ~~~~qk~~~~a~~f~~~~s  730 (958)
T KOG1074|consen  712 CSSCQKTFSDARSFSQQIS  730 (958)
T ss_pred             cchhhhcccccccchhhhh
Confidence            9999999999888888887

>KOG2462|consensus

Probab=99.96  E-value=1.8e-30  Score=230.08  Aligned_cols=130  Identities=25%  Similarity=0.467  Sum_probs=125.7

Q ss_pred             CceecccccccccchhhHHHHHHhccCc----cccCCcChhccCCcHHHHHHhhhcC-CCCCCcCccccCChHHHHHHHH
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE----FYQCDVCFKEFRSSVTLRNHTRRHD-NFSCDECSVECQDLNALRMHTL  541 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e----~y~C~~C~~~F~~~~~L~~H~~~H~-~~~C~~C~~~f~~~~~L~~H~~  541 (597)
                      ..|+|+.||+.+.+.++|.+|.++|-.-    .+.|+.||+.|.+...|+.|+|+|+ ++.|.+|||.|....-|+-|+|
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiR  208 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIR  208 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccc
Confidence            5699999999999999999999999753    6999999999999999999999999 9999999999999999999999


Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCCCcceeeceEEEecC
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIFWIS  597 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  597 (597)
                      +|+|||||.|+.|+++|..+++|+.||.+ |.+.++|+|..||++|...+.|.+|.
T Consensus       209 THTGEKPF~C~hC~kAFADRSNLRAHmQT-HS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  209 THTGEKPFSCPHCGKAFADRSNLRAHMQT-HSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             cccCCCCccCCcccchhcchHHHHHHHHh-hcCCccccCcchhhHHHHHHHHHHhh
Confidence            99999999999999999999999999999 99999999999999999999999983

>KOG1074|consensus

Probab=99.95  E-value=1.5e-29  Score=253.81  Aligned_cols=209  Identities=22%  Similarity=0.400  Sum_probs=157.0

Q ss_pred             cCeeecCCCcccccchhhhHhHhhhcccCCCCCCCCC-CCCcCccCCCCHHHHHHHHHHhcCCCCCCCCCCCccccCCCC
Q psy12199        329 VQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESP-VCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPY  407 (597)
Q Consensus       329 ~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~-~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~  407 (597)
                      ..|-+|-+|-++.+-.+.|+.|.+      +|+|+++ +|.+||+.|.++.+|+.|+. +|...+...            
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyr------tHtGERPFkCKiCgRAFtTkGNLkaH~~-vHka~p~~R------------  663 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYR------THTGERPFKCKICGRAFTTKGNLKAHMS-VHKAKPPAR------------  663 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhh------cccCcCccccccccchhccccchhhccc-ccccCcccc------------
Confidence            346799999999999999999999      8888888 99999999999999999999 887544322            


Q ss_pred             CCcccccCccCceecc---cCccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhcCCCceecccccccccchhhH
Q psy12199        408 PPLRKAKQHVKSVTCS---VCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSL  484 (597)
Q Consensus       408 ~~~~~~~~~~~~~~C~---~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L  484 (597)
                                -.+.|+   +|.+.|.+.-.|..|++.|-++..+.-.....      .+  .-.-+|..|.+.|.....+
T Consensus       664 ----------~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~s~g~~a~e------~~--~~adq~~~~qk~~~~a~~f  725 (958)
T KOG1074|consen  664 ----------VQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQISNGGTAAE------GI--LAADQCSSCQKTFSDARSF  725 (958)
T ss_pred             ----------ccccCCchhhhcccccccccccceEEeecCCCCCCCccccc------cc--chhcccchhhhcccccccc
Confidence                      358999   99999999999999999555444332211110      00  0124577777777666666


Q ss_pred             HHHHHhc----------------cCc-----cccCCcChhccCCcHHHHHHhhhc-------------------------
Q psy12199        485 LTHYDMH----------------SGE-----FYQCDVCFKEFRSSVTLRNHTRRH-------------------------  518 (597)
Q Consensus       485 ~~H~~~H----------------~~e-----~y~C~~C~~~F~~~~~L~~H~~~H-------------------------  518 (597)
                      ..++..|                +++     +..+..|+..+.....+..+--.+                         
T Consensus       726 ~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~  805 (958)
T KOG1074|consen  726 SQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTS  805 (958)
T ss_pred             hhhhhccCCcccCCcccccccccccccccCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccC
Confidence            6665544                221     345666777666655554442111                         


Q ss_pred             ------------------------------------------------------------------------CCCCCCcC
Q psy12199        519 ------------------------------------------------------------------------DNFSCDEC  526 (597)
Q Consensus       519 ------------------------------------------------------------------------~~~~C~~C  526 (597)
                                                                                              ....|..|
T Consensus       806 ~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vC  885 (958)
T KOG1074|consen  806 EKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVC  885 (958)
T ss_pred             CCCcccccCCCcCCccccccCchhhcccccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccc
Confidence                                                                                    01449999


Q ss_pred             ccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        527 SVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       527 ~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      |+.|...++|..|+++|+|+|||.|.+|++.|..+.+|++||.+ |...
T Consensus       886 gk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgt-H~w~  933 (958)
T KOG1074|consen  886 GKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGT-HMWV  933 (958)
T ss_pred             hhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhcc-cccc
Confidence            99999999999999999999999999999999999999999998 5443

>KOG2462|consensus

Probab=99.94  E-value=1.1e-27  Score=212.49  Aligned_cols=138  Identities=27%  Similarity=0.535  Sum_probs=122.7

Q ss_pred             CCCCCCCccCccCCCchhhHhhhhhccCCCCCCCCCccccChhhhhHHHHHHHHHHhhhhhcccCCCccccCCCCccCCC
Q psy12199        121 LKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFK  200 (597)
Q Consensus       121 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~~C~k~~f~  200 (597)
                      .-.|+|+.||+.+.+.++|.+|.++|-.-.   ....+.|++|++.|.  +...|..|++ +|+  -+++|.+||| .|.
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~---s~ka~~C~~C~K~Yv--SmpALkMHir-TH~--l~c~C~iCGK-aFS  198 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLD---SKKAFSCKYCGKVYV--SMPALKMHIR-THT--LPCECGICGK-AFS  198 (279)
T ss_pred             CCceeccccccccccccccchhhccccccc---ccccccCCCCCceee--ehHHHhhHhh-ccC--CCcccccccc-ccc
Confidence            346899999999999999999999986432   234489999999998  6788999988 775  7899999999 699


Q ss_pred             ChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHh
Q psy12199        201 NQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKA  267 (597)
Q Consensus       201 ~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~  267 (597)
                      ....|+-|+|+|+|||||.|+.|++.|.++++|+.||++|.+.++|+|..|+++|...+.|.+|...
T Consensus       199 RPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  199 RPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             chHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999999999999999999999999999999999999999999999999999999999999864

>KOG3608|consensus

Probab=99.92  E-value=1.8e-25  Score=202.59  Aligned_cols=204  Identities=26%  Similarity=0.489  Sum_probs=176.3

Q ss_pred             eeecC--CCcccccchhhhHhHhhhcccCCCCCCCCC-CCCcCccCCCCHHHHHHHHHHhcCCCCCCCCCCCccccCCCC
Q psy12199        331 YFLCE--LCDKTSIHYTYLCLHKKLKHSNLTYGGESP-VCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPY  407 (597)
Q Consensus       331 ~~~C~--~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~-~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~  407 (597)
                      .+.|.  .|.+.+.+++.|++|++      .|++++. .|+.||.-|.++..|..|.+..-..                 
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r------~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l-----------------  233 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIR------THSNEKVVACPHCGELFRTKTKLFDHLRRQTEL-----------------  233 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHH------hcCCCeEEecchHHHHhccccHHHHHHHhhhhh-----------------
Confidence            36675  59999999999999999      7777777 9999999999999999999843221                 


Q ss_pred             CCcccccCccCceecccCccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhcCCCceecccccccccchhhHHHH
Q psy12199        408 PPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTH  487 (597)
Q Consensus       408 ~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H  487 (597)
                              ...+|.|..|.|.|++...|..|+++|-                       .-|+|+.|+.+....++|..|
T Consensus       234 --------~~n~fqC~~C~KrFaTeklL~~Hv~rHv-----------------------n~ykCplCdmtc~~~ssL~~H  282 (467)
T KOG3608|consen  234 --------NTNSFQCAQCFKRFATEKLLKSHVVRHV-----------------------NCYKCPLCDMTCSSASSLTTH  282 (467)
T ss_pred             --------cCCchHHHHHHHHHhHHHHHHHHHHHhh-----------------------hcccccccccCCCChHHHHHH
Confidence                    1157999999999999999999999554                       359999999999999999999


Q ss_pred             HHhccCc--cccCCcChhccCCcHHHHHHhhhcC--CCCCCc--CccccCChHHHHHHHHHhh-cc--ceeecCcCcccc
Q psy12199        488 YDMHSGE--FYQCDVCFKEFRSSVTLRNHTRRHD--NFSCDE--CSVECQDLNALRMHTLREH-GY--KILACEKCDVKF  558 (597)
Q Consensus       488 ~~~H~~e--~y~C~~C~~~F~~~~~L~~H~~~H~--~~~C~~--C~~~f~~~~~L~~H~~~h~-~~--k~~~C~~C~~~F  558 (597)
                      ++.-+.+  ||+|+.|++.|.+.+.|.+|..+|.  .|+|..  |.++|.+...|+.|++.++ |.  -+|.|..|++.|
T Consensus       283 ~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~f  362 (467)
T KOG3608|consen  283 IRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFF  362 (467)
T ss_pred             HHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhh
Confidence            9975544  9999999999999999999999998  699999  9999999999999999887 43  569999999999


Q ss_pred             CChhHHHhhhcccCCCCcc-----cccCCCCccee
Q psy12199        559 THKALLAEHINTKHNTDVT-----LKCQLCNVVVL  588 (597)
Q Consensus       559 ~~~~~L~~H~~~~H~~~~~-----~~C~~C~~~f~  588 (597)
                      ++-.+|.+|++++|.-..|     |.=.+|.-+|.
T Consensus       363 t~G~~L~~HL~kkH~f~~PsGh~RFtYk~~edG~m  397 (467)
T KOG3608|consen  363 TSGKSLSAHLMKKHGFRLPSGHKRFTYKVDEDGFM  397 (467)
T ss_pred             ccchhHHHHHHHhhcccCCCCCCceeeeeccCcee
Confidence            9999999999999975544     55555555553

>KOG3623|consensus

Probab=99.92  E-value=5.3e-26  Score=224.24  Aligned_cols=108  Identities=29%  Similarity=0.636  Sum_probs=95.4

Q ss_pred             ccccChhhhhHHHHHHHHHHhhhhhcccC-CCccccCCCCccCCCChhhHHHHhhccCC-------------Cccccccc
Q psy12199        157 MHECRECGSQFADILKHSLETHLSFIHVQ-DNQLKCTICNKENFKNQLSLSIHMRYHEN-------------VREYECEI  222 (597)
Q Consensus       157 ~~~C~~C~~~f~~~~~~~l~~H~~~~h~~-~~~~~C~~C~k~~f~~~~~L~~H~~~H~~-------------~k~~~C~~  222 (597)
                      +..|++|...+.  .-.+|+.|+.+.|.. +..|.|.+|.+ +|..+..|.+||.+|..             .+.|+|.+
T Consensus       210 lltcpycdrgyk--rltslkeHikyrhekne~nfsC~lCsy-tFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtE  286 (1007)
T KOG3623|consen  210 LLTCPYCDRGYK--RLTSLKEHIKYRHEKNEPNFSCMLCSY-TFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTE  286 (1007)
T ss_pred             hhcchhHHHHHH--HHHHHHHHHHHHHhhCCCCCcchhhhh-hhhhHHHHHHHHHhhcCCCcccccccchhhhccccccc
Confidence            467999999998  567899998877754 45689999999 89999999999998842             35699999


Q ss_pred             ccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHh
Q psy12199        223 CKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKA  267 (597)
Q Consensus       223 C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~  267 (597)
                      |||.|..+.+|+.|+|+|.||+||.|+.|++.|...+.+..||..
T Consensus       287 CgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  287 CGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             cchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            999999999999999999999999999999999999999999854

>KOG3608|consensus

Probab=99.92  E-value=3.3e-25  Score=200.97  Aligned_cols=233  Identities=25%  Similarity=0.499  Sum_probs=161.1

Q ss_pred             cccc--CCCCccCCCChhhHHHHhhccCC------------Cc-ccccc--cccccccCchhhhhhhccccccCccccCc
Q psy12199        188 QLKC--TICNKENFKNQLSLSIHMRYHEN------------VR-EYECE--ICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       188 ~~~C--~~C~k~~f~~~~~L~~H~~~H~~------------~k-~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      -|.|  ..|+. .|.+...+..|+..|..            ++ .+.|.  .|-+.|.++..|++|+++|++++...|+.
T Consensus       134 ~f~C~WedCe~-~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~  212 (467)
T KOG3608|consen  134 NFRCGWEDCER-EFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPH  212 (467)
T ss_pred             hhccChhhcCC-cccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecch
Confidence            4566  56998 69999999999877731            22 25675  48899999999999999999999999999


Q ss_pred             cchhhhchHHHHHHHHhhcccccCCcccCCccccccccCCCCchHHHHhhhhhccCccccccccchhhhhcccccccccC
Q psy12199        251 CGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRIVQ  330 (597)
Q Consensus       251 C~~~f~~~~~L~~H~~~H~~~~~~~~~~~C~~C~~c~~~f~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (597)
                      ||.-|.++..|-.|++.-+...                                                        ..
T Consensus       213 Cg~~F~~~tkl~DH~rRqt~l~--------------------------------------------------------~n  236 (467)
T KOG3608|consen  213 CGELFRTKTKLFDHLRRQTELN--------------------------------------------------------TN  236 (467)
T ss_pred             HHHHhccccHHHHHHHhhhhhc--------------------------------------------------------CC
Confidence            9999999999999987654110                                                        13


Q ss_pred             eeecCCCcccccchhhhHhHhhhcccCCCCCCCCCCCCcCccCCCCHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCc
Q psy12199        331 YFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPL  410 (597)
Q Consensus       331 ~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~  410 (597)
                      +|.|..|.+.|.+...|..|+.                                  .|.                     
T Consensus       237 ~fqC~~C~KrFaTeklL~~Hv~----------------------------------rHv---------------------  261 (467)
T KOG3608|consen  237 SFQCAQCFKRFATEKLLKSHVV----------------------------------RHV---------------------  261 (467)
T ss_pred             chHHHHHHHHHhHHHHHHHHHH----------------------------------Hhh---------------------
Confidence            4666666666666666666665                                  222                     


Q ss_pred             ccccCccCceecccCccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhcCCCceecccccccccchhhHHHHHHh
Q psy12199        411 RKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDM  490 (597)
Q Consensus       411 ~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~  490 (597)
                             ..|+|+.|+.+....+.|..|++..|...                    +||+|+.|+++|.+.+.|.+|..+
T Consensus       262 -------n~ykCplCdmtc~~~ssL~~H~r~rHs~d--------------------kpfKCd~Cd~~c~~esdL~kH~~~  314 (467)
T KOG3608|consen  262 -------NCYKCPLCDMTCSSASSLTTHIRYRHSKD--------------------KPFKCDECDTRCVRESDLAKHVQV  314 (467)
T ss_pred             -------hcccccccccCCCChHHHHHHHHhhhccC--------------------CCccccchhhhhccHHHHHHHHHh
Confidence                   23666666666666666666666666554                    667777777777777777777777


Q ss_pred             ccCccccCCc--ChhccCCcHHHHHHhhhcC------CCCCCcCccccCChHHHHHHHHHhhc------cceeecCcCcc
Q psy12199        491 HSGEFYQCDV--CFKEFRSSVTLRNHTRRHD------NFSCDECSVECQDLNALRMHTLREHG------YKILACEKCDV  556 (597)
Q Consensus       491 H~~e~y~C~~--C~~~F~~~~~L~~H~~~H~------~~~C~~C~~~f~~~~~L~~H~~~h~~------~k~~~C~~C~~  556 (597)
                      |+...|+|+.  |.++|++...|++|++.++      +|.|..|++.|.+..+|..|+..-++      -+.|.=..|.-
T Consensus       315 HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsGh~RFtYk~~ed  394 (467)
T KOG3608|consen  315 HSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSGHKRFTYKVDED  394 (467)
T ss_pred             ccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCCCCCCceeeeeccC
Confidence            7644677766  7777777777777766554      46777777777777777777655443      34455556655


Q ss_pred             ccC
Q psy12199        557 KFT  559 (597)
Q Consensus       557 ~F~  559 (597)
                      +|-
T Consensus       395 G~m  397 (467)
T KOG3608|consen  395 GFM  397 (467)
T ss_pred             cee
Confidence            553

>KOG3623|consensus

Probab=99.90  E-value=5.6e-25  Score=217.08  Aligned_cols=77  Identities=23%  Similarity=0.431  Sum_probs=73.7

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCCCcceeeceEEEecC
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIFWIS  597 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  597 (597)
                      .|.|++|+|.|...+.|.+|..-|+|.+||+|.+|.++|..+..|..|+|. |.|++||+|+.|++.|+....|.+|+
T Consensus       894 myaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRL-HSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  894 MYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRL-HSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             cchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhh-ccCCCcchhhhhhhhcccccchHhhh
Confidence            599999999999999999999999999999999999999999999999999 99999999999999999999998884

>KOG3576|consensus

Probab=99.71  E-value=4.3e-19  Score=148.84  Aligned_cols=109  Identities=27%  Similarity=0.555  Sum_probs=90.2

Q ss_pred             CceecccccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhcC---CCCCCcCccccCChHHHHHHHHH
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHD---NFSCDECSVECQDLNALRMHTLR  542 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~---~~~C~~C~~~f~~~~~L~~H~~~  542 (597)
                      ..|.|.+|++.|.....|.+|++-|..- .|-|..||+.|.....|++|+|+|+   ||+|..|++.|.++-.|..|++.
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~k  195 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKK  195 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHH
Confidence            5689999999999999999999998876 7888888888888888888888887   78888888888888888888776


Q ss_pred             hhc-----------cceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        543 EHG-----------YKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       543 h~~-----------~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      -+|           +|.|.|..||++-.....+..|++.+|...
T Consensus       196 vhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  196 VHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            655           356888888888888888888888766543

>KOG3576|consensus

Probab=99.67  E-value=2.8e-17  Score=138.07  Aligned_cols=109  Identities=36%  Similarity=0.708  Sum_probs=99.4

Q ss_pred             ccccChhhhhHHHHHHHHHHhhhhhcccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhh
Q psy12199        157 MHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEH  236 (597)
Q Consensus       157 ~~~C~~C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H  236 (597)
                      .|.|.+|+|.|.  ....|.+|+. .|...+.|.|..||| .|.+..+|++|+|+|+|.+||+|..|+++|..+-.|..|
T Consensus       117 ~ftCrvCgK~F~--lQRmlnrh~k-ch~~vkr~lct~cgk-gfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  117 SFTCRVCGKKFG--LQRMLNRHLK-CHSDVKRHLCTFCGK-GFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             eeeeehhhhhhh--HHHHHHHHhh-hccHHHHHHHhhccC-cccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            389999999999  7899999998 999999999999999 799999999999999999999999999999999999999


Q ss_pred             hc-ccc----------ccCccccCccchhhhchHHHHHHHHhhc
Q psy12199        237 SV-SHM----------SVKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       237 ~~-~H~----------~~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      ++ +|.          .++.|.|..||.+-.....+..|++.|+
T Consensus       193 l~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  193 LKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             HHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcC
Confidence            76 442          2467999999999999999999999887

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.27  E-value=7.2e-12  Score=126.93  Aligned_cols=136  Identities=18%  Similarity=0.410  Sum_probs=98.9

Q ss_pred             ceecccCccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhcCCCceeccc--ccccccchhhHHHHHHhccCccc
Q psy12199        419 SVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEI--CSKTYTVEGSLLTHYDMHSGEFY  496 (597)
Q Consensus       419 ~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~e~y  496 (597)
                      ...|+.|...... .+|..|.. ....                     ..-.|+.  ||..| .+..|..|        +
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe~-~C~r---------------------~~V~Cp~~~Cg~v~-~r~el~~H--------~  454 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHEA-YCSR---------------------HNVVCPHDGCGIVL-RVEEAKNH--------V  454 (567)
T ss_pred             eEECCCCCCccch-hHHHHHHh-hCCC---------------------cceeCCccccccee-eccccccC--------c
Confidence            4579999988765 44668876 3332                     2356774  88887 34444444        4


Q ss_pred             cCCcChhccCCcHHHHHHhhhcC-CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccC----------ChhHHH
Q psy12199        497 QCDVCFKEFRSSVTLRNHTRRHD-NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFT----------HKALLA  565 (597)
Q Consensus       497 ~C~~C~~~F~~~~~L~~H~~~H~-~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~----------~~~~L~  565 (597)
                      .|+.|++.|. ...|..|+++|+ ++.|+ ||+.+ .+..|..|+.+|.+++|+.|..|++.|.          ....|.
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt  531 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMS  531 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHH
Confidence            7888888885 577888888754 78888 88654 6688888888888888888888888884          235788


Q ss_pred             hhhcccCCCCcccccCCCCcceeece
Q psy12199        566 EHINTKHNTDVTLKCQLCNVVVLIEE  591 (597)
Q Consensus       566 ~H~~~~H~~~~~~~C~~C~~~f~~~~  591 (597)
                      .|... . +.+++.|..||+.+..+.
T Consensus       532 ~HE~~-C-G~rt~~C~~Cgk~Vrlrd  555 (567)
T PLN03086        532 EHESI-C-GSRTAPCDSCGRSVMLKE  555 (567)
T ss_pred             HHHHh-c-CCcceEccccCCeeeehh
Confidence            88876 4 788888888888887653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.16  E-value=4.9e-11  Score=120.99  Aligned_cols=145  Identities=21%  Similarity=0.496  Sum_probs=113.8

Q ss_pred             CCCCccCccCCCchhhHhhhhhccCCCCCCCCCccccCh--hhhhHHHHHHHHHHhhhhhcccCCCccccCCCCccCCCC
Q psy12199        124 PRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRE--CGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKN  201 (597)
Q Consensus       124 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~~C~k~~f~~  201 (597)
                      -.|+.|....... +|..|+.......       ..|+.  |+..|.   +..+..|          +.|+.|++ .|. 
T Consensus       408 V~C~NC~~~i~l~-~l~lHe~~C~r~~-------V~Cp~~~Cg~v~~---r~el~~H----------~~C~~Cgk-~f~-  464 (567)
T PLN03086        408 VECRNCKHYIPSR-SIALHEAYCSRHN-------VVCPHDGCGIVLR---VEEAKNH----------VHCEKCGQ-AFQ-  464 (567)
T ss_pred             EECCCCCCccchh-HHHHHHhhCCCcc-------eeCCcccccceee---ccccccC----------ccCCCCCC-ccc-
Confidence            3699998866654 5567875543322       56884  999885   4555555          48999999 685 


Q ss_pred             hhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhh----------chHHHHHHHHhhccc
Q psy12199        202 QLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS----------RASRLRAHLKAHSVV  271 (597)
Q Consensus       202 ~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~----------~~~~L~~H~~~H~~~  271 (597)
                      ...|..|+++|+  ++|.|+ ||+.+ .+..|..|+.+|.+++|+.|..|++.|.          ..+.|..|...+   
T Consensus       465 ~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C---  537 (567)
T PLN03086        465 QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC---  537 (567)
T ss_pred             hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc---
Confidence            678999999985  889999 99765 6799999999999999999999999995          245899998886   


Q ss_pred             ccCCcccCCccccccccCCCCchHHHHhhhhhcc
Q psy12199        272 ASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVH  305 (597)
Q Consensus       272 ~~~~~~~~C~~C~~c~~~f~~~~~~l~~H~~~~~  305 (597)
                        +.+++.|..|   ++.+.  ...+..|+...|
T Consensus       538 --G~rt~~C~~C---gk~Vr--lrdm~~H~~~~h  564 (567)
T PLN03086        538 --GSRTAPCDSC---GRSVM--LKEMDIHQIAVH  564 (567)
T ss_pred             --CCcceEcccc---CCeee--ehhHHHHHHHhh
Confidence              8899999888   88776  567788877665

>PHA00733 hypothetical protein

Probab=99.01  E-value=2.1e-10  Score=94.53  Aligned_cols=82  Identities=18%  Similarity=0.334  Sum_probs=60.8

Q ss_pred             cCCCccccCCCCccCCCChhhHHHH------hhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhc
Q psy12199        184 VQDNQLKCTICNKENFKNQLSLSIH------MRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSR  257 (597)
Q Consensus       184 ~~~~~~~C~~C~k~~f~~~~~L~~H------~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~  257 (597)
                      ...+++.|.+|.+ .|.+...|..+      +. +.+++||.|+.|++.|.+...|..|++.|  +.+|.|+.|++.|..
T Consensus        36 ~~~~~~~~~~~~~-~~~~~~~l~~~~~l~~~~~-~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~  111 (128)
T PHA00733         36 PEQKRLIRAVVKT-LIYNPQLLDESSYLYKLLT-SKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRN  111 (128)
T ss_pred             hhhhhHHHHHHhh-hccChhhhcchHHHHhhcc-cCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCC
Confidence            3455666777766 45555555443      33 34578899999999999999999998876  356899999999999


Q ss_pred             hHHHHHHHHhhc
Q psy12199        258 ASRLRAHLKAHS  269 (597)
Q Consensus       258 ~~~L~~H~~~H~  269 (597)
                      ...|..|+...+
T Consensus       112 ~~sL~~H~~~~h  123 (128)
T PHA00733        112 TDSTLDHVCKKH  123 (128)
T ss_pred             HHHHHHHHHHhc
Confidence            999999987655

>PHA00733 hypothetical protein

Probab=99.01  E-value=2.5e-10  Score=94.11  Aligned_cols=52  Identities=21%  Similarity=0.425  Sum_probs=30.2

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCC
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHN  573 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~  573 (597)
                      +|.|+.||+.|.+...|..|++.|  +.+|.|+.|+++|.....|.+|+...|+
T Consensus        73 Py~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         73 PYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            455555555555555555555543  2356666666666666666666666554

>PHA02768 hypothetical protein; Provisional

Probab=98.95  E-value=4.6e-10  Score=74.85  Aligned_cols=43  Identities=21%  Similarity=0.447  Sum_probs=30.0

Q ss_pred             eecCcCccccCChhHHHhhhcccCCCCcccccCCCCcceeeceEEE
Q psy12199        549 LACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIF  594 (597)
Q Consensus       549 ~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  594 (597)
                      |+|+.||+.|++.++|..|+++ |+  +||+|..|+++|...+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~-H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRK-HN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHh-cC--CcccCCcccceecccceeE
Confidence            6677777777777777777776 55  5677777777777666664

>PHA02768 hypothetical protein; Provisional

Probab=98.89  E-value=7.3e-10  Score=73.89  Aligned_cols=44  Identities=11%  Similarity=0.209  Sum_probs=29.8

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHH
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLA  565 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~  565 (597)
                      .|.|+.||+.|....+|..|+++|+  +||+|..|++.|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3666667777777777777777766  5677777777777666554

>KOG3993|consensus

Probab=98.78  E-value=3.7e-09  Score=99.89  Aligned_cols=81  Identities=27%  Similarity=0.549  Sum_probs=53.9

Q ss_pred             ccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccc-------------------------
Q psy12199        188 QLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMS-------------------------  242 (597)
Q Consensus       188 ~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~-------------------------  242 (597)
                      .|.|.+|.. .|.+...|.+|.-.-.-.-.|+|++|+|+|+-..+|..|.|+|..                         
T Consensus       267 dyiCqLCK~-kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  267 DYICQLCKE-KYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHH-hhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            466666665 466666666664321112237777777777777777777766621                         


Q ss_pred             --------cCccccCccchhhhchHHHHHHHHhhc
Q psy12199        243 --------VKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       243 --------~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                              +..|.|.+|++.|.+...|+.|+.+|.
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence                    125888888888888888888888876

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.70  E-value=1e-08  Score=58.40  Aligned_cols=26  Identities=31%  Similarity=0.546  Sum_probs=19.9

Q ss_pred             HHHHHHHHhhccceeecCcCccccCC
Q psy12199        535 ALRMHTLREHGYKILACEKCDVKFTH  560 (597)
Q Consensus       535 ~L~~H~~~h~~~k~~~C~~C~~~F~~  560 (597)
                      +|..|+++|+|++||+|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47778888888888888888887753

...

>KOG3993|consensus

Probab=98.65  E-value=4.6e-09  Score=99.28  Aligned_cols=113  Identities=16%  Similarity=0.267  Sum_probs=78.1

Q ss_pred             CeeecCCCcccccchhhhHhHhhhcccCCCCCCCCCCCCcCccCCCCHHHHHHHHHHhcCCCCCCCCCCCccccCC--CC
Q psy12199        330 QYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGGESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNN--PY  407 (597)
Q Consensus       330 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~--~~  407 (597)
                      .-|.|.+|...|.+.-.|.+|.-..-     ....|+|+.|++.|+-..+|..|.+ .|...++............  ..
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RI-----V~vEYrCPEC~KVFsCPANLASHRR-WHKPR~eaa~a~~~P~k~~~~~r  339 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRI-----VHVEYRCPECDKVFSCPANLASHRR-WHKPRPEAAKAGSPPPKQAVETR  339 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCee-----EEeeecCCcccccccCchhhhhhhc-ccCCchhhhhcCCCChhhhhhhh
Confidence            44999999999999999999975211     1234599999999999999999999 8876555432111000000  00


Q ss_pred             C-----CcccccCccCceecccCccccCChhhHHhHhhhccCCCCC
Q psy12199        408 P-----PLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEP  448 (597)
Q Consensus       408 ~-----~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~  448 (597)
                      .     ........+..|.|..|++.|.....|+.|+..+|.....
T Consensus       340 ae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~  385 (500)
T KOG3993|consen  340 AEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLA  385 (500)
T ss_pred             hhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccc
Confidence            0     0011123345799999999999999999998877765443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.53  E-value=3.5e-08  Score=56.19  Aligned_cols=24  Identities=42%  Similarity=0.823  Sum_probs=13.4

Q ss_pred             HHHHhhccCCCccccccccccccc
Q psy12199        205 LSIHMRYHENVREYECEICKKKFI  228 (597)
Q Consensus       205 L~~H~~~H~~~k~~~C~~C~~~F~  228 (597)
                      |..|+++|+|++||.|++|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555554

...

>PHA00732 hypothetical protein

Probab=98.39  E-value=1.7e-07  Score=69.51  Aligned_cols=21  Identities=24%  Similarity=0.604  Sum_probs=8.4

Q ss_pred             ccCCcChhccCCcHHHHHHhh
Q psy12199        496 YQCDVCFKEFRSSVTLRNHTR  516 (597)
Q Consensus       496 y~C~~C~~~F~~~~~L~~H~~  516 (597)
                      |.|+.||+.|.+...|+.|++
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r   22 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHAR   22 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhh
Confidence            334444444444444444433

>PHA00616 hypothetical protein

Probab=98.38  E-value=1.5e-07  Score=59.68  Aligned_cols=34  Identities=21%  Similarity=0.269  Sum_probs=20.3

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCc
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEK  553 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~  553 (597)
                      +|+|..||+.|...+.|..|++.|+|+++|.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            3556666666666666666666666666665543

>PHA00616 hypothetical protein

Probab=98.26  E-value=2.2e-07  Score=58.86  Aligned_cols=34  Identities=21%  Similarity=0.409  Sum_probs=31.4

Q ss_pred             eeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        548 ILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      ||+|+.||+.|..+++|.+|+++ |++++|+.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~-~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLS-VHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHH-hcCCCccceeE
Confidence            79999999999999999999998 77889998875

>PHA00732 hypothetical protein

Probab=98.25  E-value=4.8e-07  Score=67.17  Aligned_cols=45  Identities=27%  Similarity=0.531  Sum_probs=38.3

Q ss_pred             CCCCCcCccccCChHHHHHHHHH-hhccceeecCcCccccCChhHHHhhhcc
Q psy12199        520 NFSCDECSVECQDLNALRMHTLR-EHGYKILACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~-h~~~k~~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      ||.|..||+.|.+...|+.|++. |.+   +.|+.|++.|.   .|..|+.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhcc
Confidence            58899999999999999999985 543   58999999997   58888876

>KOG1146|consensus

Probab=97.96  E-value=1.2e-05  Score=87.79  Aligned_cols=105  Identities=30%  Similarity=0.493  Sum_probs=73.0

Q ss_pred             cChhhhhHHHHHHHHHHhhhhhcccCCCccccCCCCccCCCChhhHHHHhhc-c------------------------CC
Q psy12199        160 CRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRY-H------------------------EN  214 (597)
Q Consensus       160 C~~C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~-H------------------------~~  214 (597)
                      |.-|+..+.  .+..+..|+...+...+.|+|+.|+. .|.....|..|||. |                        .+
T Consensus       439 ~~~~e~~~~--s~r~~~~~t~~L~S~~kt~~cpkc~~-~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~  515 (1406)
T KOG1146|consen  439 LTKAEPLLE--SKRSLEGQTVVLHSFFKTLKCPKCNW-HYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCP  515 (1406)
T ss_pred             ccchhhhhh--hhcccccceeeeecccccccCCccch-hhhhHHHhhhcccccccccchhHhHhccccccccccccccCC
Confidence            444444454  34555555555555566666666666 56666666666665 1                        23


Q ss_pred             CcccccccccccccCchhhhhhhcc--ccc-----------------------------------------cCccccCcc
Q psy12199        215 VREYECEICKKKFINKSTLKEHSVS--HMS-----------------------------------------VKPFKCEIC  251 (597)
Q Consensus       215 ~k~~~C~~C~~~F~~~~~L~~H~~~--H~~-----------------------------------------~~~~~C~~C  251 (597)
                      .++|.|..|..++..+.+|.+|++.  |..                                         .-.+.|.+|
T Consensus       516 ~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc  595 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVC  595 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhh
Confidence            4689999999999999999999864  311                                         014889999


Q ss_pred             chhhhchHHHHHHHHh
Q psy12199        252 GHYLSRASRLRAHLKA  267 (597)
Q Consensus       252 ~~~f~~~~~L~~H~~~  267 (597)
                      ++.-.-..+|+.||..
T Consensus       596 ~yetniarnlrihmts  611 (1406)
T KOG1146|consen  596 SYETNIARNLRIHMTA  611 (1406)
T ss_pred             cchhhhhhcccccccc
Confidence            9999999999999864

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.88  E-value=1.8e-05  Score=54.56  Aligned_cols=52  Identities=31%  Similarity=0.536  Sum_probs=37.8

Q ss_pred             ceecccCccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhcCCCceecccccccccchhhHHHHHHhcc
Q psy12199        419 SVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       419 ~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      .|.|++|++ ..+...|..|....|..+.                   +.+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~-------------------~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSES-------------------KNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCC-------------------CCccCCCchhhhh--hHHHHHHHHhc
Confidence            378888888 4556778888887776642                   5678888887654  38888887654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG1146|consensus

Probab=97.85  E-value=2e-05  Score=86.09  Aligned_cols=77  Identities=14%  Similarity=0.317  Sum_probs=62.9

Q ss_pred             ccCCcChhccCCcHHHHHHhhhcCCCCCCcCccccCChHHHHHHHHHhh-----------------ccceeecCcCcccc
Q psy12199        496 YQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREH-----------------GYKILACEKCDVKF  558 (597)
Q Consensus       496 y~C~~C~~~F~~~~~L~~H~~~H~~~~C~~C~~~f~~~~~L~~H~~~h~-----------------~~k~~~C~~C~~~F  558 (597)
                      +.|..|++.|.....+. |+-.-..|.|..|...|.....|..|.+.-.                 ..++| |..|...|
T Consensus      1261 ~~c~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~ 1338 (1406)
T KOG1146|consen 1261 GECGAVDELLTPSFGIS-TLDVTHRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLL 1338 (1406)
T ss_pred             chhhhccccccCcccee-ecccchhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chHHHhhc
Confidence            77899999988888888 7777678999999999999999999874321                 23457 99999999


Q ss_pred             CChhHHHhhhcccCCC
Q psy12199        559 THKALLAEHINTKHNT  574 (597)
Q Consensus       559 ~~~~~L~~H~~~~H~~  574 (597)
                      .....|..||+..+..
T Consensus      1339 ~~~~alqihm~~~~~~ 1354 (1406)
T KOG1146|consen 1339 SGREALQIHMRSSAHR 1354 (1406)
T ss_pred             chhHHHHHHHHHhhhc
Confidence            9999999999886653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.81  E-value=2.2e-05  Score=54.14  Aligned_cols=49  Identities=31%  Similarity=0.548  Sum_probs=32.7

Q ss_pred             CCCCcCccccCChHHHHHHHHHhhc--cceeecCcCccccCChhHHHhhhcccC
Q psy12199        521 FSCDECSVECQDLNALRMHTLREHG--YKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       521 ~~C~~C~~~f~~~~~L~~H~~~h~~--~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      |.|++|++ -.+...|..|....+.  .+.+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            67777777 3445667777655433  24688888887654  38888887755

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.73  E-value=1.9e-05  Score=43.66  Aligned_cols=22  Identities=32%  Similarity=0.804  Sum_probs=11.6

Q ss_pred             eecccccccccchhhHHHHHHh
Q psy12199        469 YTCEICSKTYTVEGSLLTHYDM  490 (597)
Q Consensus       469 ~~C~~C~~~f~~~~~L~~H~~~  490 (597)
                      |.|+.|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.73  E-value=1.4e-05  Score=44.21  Aligned_cols=22  Identities=45%  Similarity=0.958  Sum_probs=13.1

Q ss_pred             ccCCcChhccCCcHHHHHHhhh
Q psy12199        496 YQCDVCFKEFRSSVTLRNHTRR  517 (597)
Q Consensus       496 y~C~~C~~~F~~~~~L~~H~~~  517 (597)
                      |+|+.|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.65  E-value=2.6e-05  Score=62.43  Aligned_cols=74  Identities=26%  Similarity=0.406  Sum_probs=18.2

Q ss_pred             cCCcChhccCCcHHHHHHhhhcCCCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccC
Q psy12199        497 QCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       497 ~C~~C~~~F~~~~~L~~H~~~H~~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      +|..|+..|.+...|..||...+.+.-. ....+.....|..+...-. ...+.|..|++.|.+...|..||+.++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~-~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP-DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             --------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             Cccccccccccccccccccccccccccc-ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            3666666666666666666554433322 1111223333333333211 125778888888888888888877643

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.48  E-value=5.6e-05  Score=60.47  Aligned_cols=26  Identities=31%  Similarity=0.730  Sum_probs=0.0

Q ss_pred             ecccCccccCChhhHHhHhhhccCCC
Q psy12199        421 TCSVCEKAFSSKENCKAHYTRQHGNK  446 (597)
Q Consensus       421 ~C~~C~~~f~~~~~L~~H~~~~h~~~  446 (597)
                      +|..|+..|.+...|..|+...|+..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~   26 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFD   26 (100)
T ss_dssp             --------------------------
T ss_pred             Cccccccccccccccccccccccccc
Confidence            47778888888888888877677643

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.42  E-value=7e-05  Score=41.84  Aligned_cols=22  Identities=32%  Similarity=0.685  Sum_probs=11.5

Q ss_pred             eecCcCccccCChhHHHhhhcc
Q psy12199        549 LACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       549 ~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      |.|++|++.|.+...|..|+++
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHh
Confidence            4555555555555555555554

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.41  E-value=9.1e-05  Score=67.96  Aligned_cols=67  Identities=33%  Similarity=0.577  Sum_probs=49.2

Q ss_pred             cCceeccc--CccccCChhhHHhHhhhccCCCCCCC---CCCCCCcchhhhhcCCCceecccccccccchhhHHHHH
Q psy12199        417 VKSVTCSV--CEKAFSSKENCKAHYTRQHGNKEPKE---PKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHY  488 (597)
Q Consensus       417 ~~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~---~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~  488 (597)
                      ++||+|++  |+|.+.+...|+.|+.--|......+   +.....|     ....|||+|++|+|++.....|+.|.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F-----~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF-----SAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc-----cccCCceeccccchhhccCccceecc
Confidence            59999987  99999999999999984454433322   2223333     23458899999999888888888874

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.35  E-value=0.00012  Score=42.17  Aligned_cols=25  Identities=24%  Similarity=0.573  Sum_probs=19.1

Q ss_pred             eeecCcCccccCChhHHHhhhcccC
Q psy12199        548 ILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      ||+|..|++.|.+...|..|++.++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5778888888888888888887633

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.34  E-value=0.00012  Score=40.85  Aligned_cols=18  Identities=50%  Similarity=0.949  Sum_probs=5.9

Q ss_pred             CCcChhccCCcHHHHHHh
Q psy12199        498 CDVCFKEFRSSVTLRNHT  515 (597)
Q Consensus       498 C~~C~~~F~~~~~L~~H~  515 (597)
                      |++|++.|.+...|..|+
T Consensus         3 C~~C~~~~~~~~~l~~H~   20 (24)
T PF13894_consen    3 CPICGKSFRSKSELRQHM   20 (24)
T ss_dssp             -SSTS-EESSHHHHHHHH
T ss_pred             CcCCCCcCCcHHHHHHHH
Confidence            333333333333333333

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.27  E-value=0.00017  Score=41.63  Aligned_cols=25  Identities=32%  Similarity=0.747  Sum_probs=15.0

Q ss_pred             ceecccccccccchhhHHHHHHhcc
Q psy12199        468 PYTCEICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       468 ~~~C~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            3566666666666666666665553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.91  E-value=0.00022  Score=65.55  Aligned_cols=25  Identities=28%  Similarity=0.422  Sum_probs=19.8

Q ss_pred             ccceeecCcCccccCChhHHHhhhc
Q psy12199        545 GYKILACEKCDVKFTHKALLAEHIN  569 (597)
Q Consensus       545 ~~k~~~C~~C~~~F~~~~~L~~H~~  569 (597)
                      ..|||+|++|++.+....-|+-|..
T Consensus       395 ~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         395 KDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCCceeccccchhhccCccceeccc
Confidence            4578888888888888888888864

>KOG2231|consensus

Probab=96.88  E-value=0.0015  Score=68.11  Aligned_cols=131  Identities=26%  Similarity=0.440  Sum_probs=87.6

Q ss_pred             ecccCccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhcCCCceeccccc---------ccccchhhHHHHHHhc
Q psy12199        421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICS---------KTYTVEGSLLTHYDMH  491 (597)
Q Consensus       421 ~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~---------~~f~~~~~L~~H~~~H  491 (597)
                      .|..| -.|.+...|+.|+...|.                       .+.|.+|-         ...-+...|..|++.-
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~-----------------------~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~g  172 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHK-----------------------LHLCSLCLQNLKIFINERKLYTRAELNLHLMFG  172 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhh-----------------------hhccccccccceeeeeeeehehHHHHHHHHhcC
Confidence            35555 555588999999987884                       35555542         2334667888887653


Q ss_pred             cC-c-----cccCCcChhccCCcHHHHHHhhhcCCCCCCcCc------cccCChHHHHHHHHHhhccceeecC--cC-cc
Q psy12199        492 SG-E-----FYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECS------VECQDLNALRMHTLREHGYKILACE--KC-DV  556 (597)
Q Consensus       492 ~~-e-----~y~C~~C~~~F~~~~~L~~H~~~H~~~~C~~C~------~~f~~~~~L~~H~~~h~~~k~~~C~--~C-~~  556 (597)
                      .. +     --.|..|...|-....|.+|++.++ |.|.+|+      ..|.....|..|.+.+|    |.|.  .| .+
T Consensus       173 d~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h-~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~  247 (669)
T KOG2231|consen  173 DPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH-EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTK  247 (669)
T ss_pred             CCccccccCCccchhhhhhhccHHHHHHhhccce-eheeecCcccccchhcccchHHHHHhhhcC----ccccccccccc
Confidence            22 2     1479999999999999999999876 6677774      45778889999999877    5665  55 23


Q ss_pred             ccC----ChhHHHhhhcccCCCCcccccC
Q psy12199        557 KFT----HKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       557 ~F~----~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      .|.    ....|.+|.+ .+..++-|.|.
T Consensus       248 ~f~~~~~~ei~lk~~~~-~~~~e~~~~~~  275 (669)
T KOG2231|consen  248 KFYVAFELEIELKAHNR-FIQHEKCYICR  275 (669)
T ss_pred             eeeehhHHHHHHHhhcc-ccchheeccCC
Confidence            333    3344555543 24445556554

>KOG2231|consensus

Probab=96.86  E-value=0.0027  Score=66.30  Aligned_cols=24  Identities=29%  Similarity=0.567  Sum_probs=15.4

Q ss_pred             CCCCcCccCCCCHHHHHHHHHHhc
Q psy12199        365 PVCEPCNLTFKNEWQYLVHNRAVH  388 (597)
Q Consensus       365 ~~C~~C~~~f~~~~~L~~H~~~~H  388 (597)
                      +.|..|...|-....|..|++..|
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h  206 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH  206 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce
Confidence            366667777776667776666433

>smart00355 ZnF_C2H2 zinc finger

Probab=96.53  E-value=0.0017  Score=36.82  Aligned_cols=20  Identities=30%  Similarity=0.547  Sum_probs=8.5

Q ss_pred             CCCcCccccCChHHHHHHHH
Q psy12199        522 SCDECSVECQDLNALRMHTL  541 (597)
Q Consensus       522 ~C~~C~~~f~~~~~L~~H~~  541 (597)
                      .|..|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHH
Confidence            34444444444444444443

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.47  E-value=0.0023  Score=35.59  Aligned_cols=21  Identities=29%  Similarity=0.556  Sum_probs=7.6

Q ss_pred             CCCcCccccCChHHHHHHHHHh
Q psy12199        522 SCDECSVECQDLNALRMHTLRE  543 (597)
Q Consensus       522 ~C~~C~~~f~~~~~L~~H~~~h  543 (597)
                      +|+.|++... ...|..|++.|
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCcCC-HHHHHHHHHhh
Confidence            3444444433 33444444433

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.43  E-value=0.0012  Score=36.70  Aligned_cols=24  Identities=25%  Similarity=0.582  Sum_probs=19.6

Q ss_pred             eecCcCccccCChhHHHhhhcccCC
Q psy12199        549 LACEKCDVKFTHKALLAEHINTKHN  573 (597)
Q Consensus       549 ~~C~~C~~~F~~~~~L~~H~~~~H~  573 (597)
                      |+|+.|++... ...|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999999998 9999999998663

>smart00355 ZnF_C2H2 zinc finger

Probab=96.29  E-value=0.0043  Score=35.05  Aligned_cols=22  Identities=41%  Similarity=0.804  Sum_probs=10.7

Q ss_pred             cCCcChhccCCcHHHHHHhhhc
Q psy12199        497 QCDVCFKEFRSSVTLRNHTRRH  518 (597)
Q Consensus       497 ~C~~C~~~F~~~~~L~~H~~~H  518 (597)
                      .|+.|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4445555555555555554433

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.12  E-value=0.0029  Score=41.17  Aligned_cols=25  Identities=20%  Similarity=0.396  Sum_probs=8.7

Q ss_pred             cccccccccccccCchhhhhhhccc
Q psy12199        216 REYECEICKKKFINKSTLKEHSVSH  240 (597)
Q Consensus       216 k~~~C~~C~~~F~~~~~L~~H~~~H  240 (597)
                      .|-.|++|+..+....+|++|+.++
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~   47 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIR   47 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHH
T ss_pred             CCCCCCcchhhccchhhHHHHHHHH
Confidence            3444444444444444444444333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.02  E-value=0.0042  Score=34.90  Aligned_cols=22  Identities=36%  Similarity=0.854  Sum_probs=12.2

Q ss_pred             eecccccccccchhhHHHHHHh
Q psy12199        469 YTCEICSKTYTVEGSLLTHYDM  490 (597)
Q Consensus       469 ~~C~~C~~~f~~~~~L~~H~~~  490 (597)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            3455555555555555555543

>PRK04860 hypothetical protein; Provisional

Probab=95.99  E-value=0.0042  Score=53.41  Aligned_cols=37  Identities=19%  Similarity=0.544  Sum_probs=22.9

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCC
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTH  560 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~  560 (597)
                      +|.|. |+.   ....++.|.++|+|+++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            56665 665   45556666666666666666666666543

>PRK04860 hypothetical protein; Provisional

Probab=95.98  E-value=0.003  Score=54.29  Aligned_cols=40  Identities=15%  Similarity=0.462  Sum_probs=31.2

Q ss_pred             ceeecCcCccccCChhHHHhhhcccCCCCcccccCCCCcceeece
Q psy12199        547 KILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEE  591 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~  591 (597)
                      -+|.|. |+.   ....+.+|.++ |+++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri-~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRV-VRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHH-hcCCccEECCCCCceeEEec
Confidence            468887 877   77778888887 88888888888888877554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.91  E-value=0.0031  Score=41.07  Aligned_cols=24  Identities=17%  Similarity=0.398  Sum_probs=8.1

Q ss_pred             ceeecCcCccccCChhHHHhhhcc
Q psy12199        547 KILACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      .|-.|++|+..+.+..+|.+|+..
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~   46 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEI   46 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHH
T ss_pred             CCCCCCcchhhccchhhHHHHHHH
Confidence            334444444444444444444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.87  E-value=0.0042  Score=34.91  Aligned_cols=22  Identities=45%  Similarity=0.933  Sum_probs=11.7

Q ss_pred             ccCCcChhccCCcHHHHHHhhh
Q psy12199        496 YQCDVCFKEFRSSVTLRNHTRR  517 (597)
Q Consensus       496 y~C~~C~~~F~~~~~L~~H~~~  517 (597)
                      |.|++|++.|.+...|+.|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            3455555555555555555543

>KOG2785|consensus

Probab=95.82  E-value=0.016  Score=55.59  Aligned_cols=155  Identities=19%  Similarity=0.227  Sum_probs=80.2

Q ss_pred             CccCceecccCccccCChhhHHhHhhhccCCCCCCC-C--CCCCCcchhhhh-------cCCCceecccccccccchhhH
Q psy12199        415 QHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKE-P--KSGEGLPALEQL-------LKMKPYTCEICSKTYTVEGSL  484 (597)
Q Consensus       415 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~-~--~~~~~~~~~~~~-------~~~k~~~C~~C~~~f~~~~~L  484 (597)
                      ....++.|.+|.+.|.+......|+...-..+.... .  .-+. .+...++       .+.+.-.+..+...+......
T Consensus        64 ~~~~~~~c~~c~k~~~s~~a~~~hl~Sk~h~~~~~~~~r~~e~d-~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~  142 (390)
T KOG2785|consen   64 EAESVVYCEACNKSFASPKAHENHLKSKKHVENLSNHQRSEEGD-SAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSS  142 (390)
T ss_pred             hcccceehHHhhccccChhhHHHHHHHhhcchhhhhhhcccccc-chhhhhccccCccccccCCCcccchhhcccccccc
Confidence            344679999999999999999999874432221111 0  0000 0001111       111111244444444443333


Q ss_pred             HHHHHhc------c-C----c--cccCCcChhccCCcHHHHHHhhhcCCCCCCcCccccCChHHHHHHHHHhhccceeec
Q psy12199        485 LTHYDMH------S-G----E--FYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREHGYKILAC  551 (597)
Q Consensus       485 ~~H~~~H------~-~----e--~y~C~~C~~~F~~~~~L~~H~~~H~~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C  551 (597)
                      ..+...-      . +    +  |-.|-+|++.|.+...-..||..++.|.=+.=.+ ..+...|..-+..--+ .-|.|
T Consensus       143 ~e~~~dd~~Edi~~d~~~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreY-L~D~~GLl~YLgeKV~-~~~~C  220 (390)
T KOG2785|consen  143 EEEEEDDEEEDIEEDGDDEDELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREY-LTDEKGLLKYLGEKVG-IGFIC  220 (390)
T ss_pred             hhhccCcchhhhhhccchhcccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHh-hhchhHHHHHHHHHhc-cCceE
Confidence            3332211      0 1    1  5678889999998888889988876432221111 1112222222211111 23677


Q ss_pred             CcCc---cccCChhHHHhhhcccC
Q psy12199        552 EKCD---VKFTHKALLAEHINTKH  572 (597)
Q Consensus       552 ~~C~---~~F~~~~~L~~H~~~~H  572 (597)
                      -.|+   +.|.+....+.||..+-
T Consensus       221 L~CN~~~~~f~sleavr~HM~~K~  244 (390)
T KOG2785|consen  221 LFCNELGRPFSSLEAVRAHMRDKG  244 (390)
T ss_pred             EEeccccCcccccHHHHHHHhhcc
Confidence            7777   77777777777776543

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.66  E-value=0.028  Score=52.71  Aligned_cols=24  Identities=29%  Similarity=0.520  Sum_probs=15.6

Q ss_pred             CCCcCccCCCCHHHHHHHHHHhcC
Q psy12199        366 VCEPCNLTFKNEWQYLVHNRAVHE  389 (597)
Q Consensus       366 ~C~~C~~~f~~~~~L~~H~~~~H~  389 (597)
                      .|..|...|.+...|..|++..|.
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE  245 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHE  245 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhh
Confidence            566666666666666666665553

>KOG2482|consensus

Probab=95.34  E-value=0.027  Score=52.87  Aligned_cols=26  Identities=19%  Similarity=0.293  Sum_probs=23.7

Q ss_pred             eecccCccccCChhhHHhHhhhccCC
Q psy12199        420 VTCSVCEKAFSSKENCKAHYTRQHGN  445 (597)
Q Consensus       420 ~~C~~C~~~f~~~~~L~~H~~~~h~~  445 (597)
                      ..|-.|.....+...|..||...|.-
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~  305 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEF  305 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHh
Confidence            68999999999999999999988864

>KOG2482|consensus

Probab=95.32  E-value=0.028  Score=52.81  Aligned_cols=92  Identities=27%  Similarity=0.334  Sum_probs=54.2

Q ss_pred             hhhHhHhhhcccCCCCCCCCC--CCCcCccCC-CCHHHHHHHHHHhcCCCCCCCCCCCccccCCCCC--CcccccCccCc
Q psy12199        345 TYLCLHKKLKHSNLTYGGESP--VCEPCNLTF-KNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYP--PLRKAKQHVKS  419 (597)
Q Consensus       345 ~~L~~H~~~~h~~~~~~~~~~--~C~~C~~~f-~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  419 (597)
                      ..|..+++..      .+..+  +|-.|...+ .+++....|+-.+|.........       ..+.  -+......-..
T Consensus       129 eaLeqqQ~Er------edt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDn-------iVyvnelLehLkekL~r  195 (423)
T KOG2482|consen  129 EALEQQQKER------EDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDN-------IVYVNELLEHLKEKLER  195 (423)
T ss_pred             HHHHHHHHHh------cCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcc-------eeeHHHHHHHHHHHHhh
Confidence            4566666632      23333  788887765 46677788887777643321110       0000  01122222346


Q ss_pred             eecccCccccCChhhHHhHhhhc-cCCCCCC
Q psy12199        420 VTCSVCEKAFSSKENCKAHYTRQ-HGNKEPK  449 (597)
Q Consensus       420 ~~C~~C~~~f~~~~~L~~H~~~~-h~~~~~~  449 (597)
                      +.|-.|.+.|..+..|+.||+.. |..-.|.
T Consensus       196 ~~CLyCekifrdkntLkeHMrkK~HrrinPk  226 (423)
T KOG2482|consen  196 LRCLYCEKIFRDKNTLKEHMRKKRHRRINPK  226 (423)
T ss_pred             heeeeeccccCCcHHHHHHHHhccCcccCCC
Confidence            89999999999999999999854 4333333

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.30  E-value=0.0085  Score=34.35  Aligned_cols=22  Identities=36%  Similarity=0.774  Sum_probs=14.7

Q ss_pred             cccccccccccCchhhhhhhcc
Q psy12199        218 YECEICKKKFINKSTLKEHSVS  239 (597)
Q Consensus       218 ~~C~~C~~~F~~~~~L~~H~~~  239 (597)
                      |.|.+|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5566777777777777766654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2785|consensus

Probab=95.24  E-value=0.038  Score=53.13  Aligned_cols=73  Identities=19%  Similarity=0.289  Sum_probs=47.0

Q ss_pred             CceecccCccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhc--CCCceeccccc---ccccchhhHHHHHHh
Q psy12199        418 KSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLL--KMKPYTCEICS---KTYTVEGSLLTHYDM  490 (597)
Q Consensus       418 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~--~~k~~~C~~C~---~~f~~~~~L~~H~~~  490 (597)
                      .|-.|-.|++.+.+-..-..||..+|+---|........-.....|.  -..-+.|-.|.   +.|.+....+.||+.
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            46789999999999999999999889764443221111111111110  12346677777   778888888888753

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.02  E-value=0.015  Score=33.32  Aligned_cols=22  Identities=27%  Similarity=0.753  Sum_probs=18.0

Q ss_pred             eecCcCccccCChhHHHhhhcc
Q psy12199        549 LACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       549 ~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      |-|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888865

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.83  E-value=0.045  Score=51.40  Aligned_cols=140  Identities=27%  Similarity=0.459  Sum_probs=79.7

Q ss_pred             ccccCC--CCccCCCChhhHHHHhhccCCCccccccccc---cccc------CchhhhhhhccccccCcc----ccCccc
Q psy12199        188 QLKCTI--CNKENFKNQLSLSIHMRYHENVREYECEICK---KKFI------NKSTLKEHSVSHMSVKPF----KCEICG  252 (597)
Q Consensus       188 ~~~C~~--C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~---~~F~------~~~~L~~H~~~H~~~~~~----~C~~C~  252 (597)
                      .|.|+.  |.. +......|..|.+..++  .+-|.+|-   +.|.      +...|..|...-..+..|    .|..|.
T Consensus       151 ~F~CP~skc~~-~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         151 SFKCPKSKCHR-RCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             HhcCCchhhhh-hhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcc
Confidence            356643  554 45556677778776443  26676663   2333      455566665443222223    488888


Q ss_pred             hhhhchHHHHHHHHhhcccccCCcccCCcccccc----ccCCCCchHHHHhhhhhccCccccccccchhhhhcccccccc
Q psy12199        253 HYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKC----CQVFPSNEENLRKHFEKVHFDLEFDEAHFYDVVLKCVYRFRI  328 (597)
Q Consensus       253 ~~f~~~~~L~~H~~~H~~~~~~~~~~~C~~C~~c----~~~f~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (597)
                      ..|.....|..|++.-+     +   .|..|...    .+.|.+ ...|..|.+..|                       
T Consensus       228 ~~FYdDDEL~~HcR~~H-----E---~ChICD~v~p~~~QYFK~-Y~~Le~HF~~~h-----------------------  275 (493)
T COG5236         228 IYFYDDDELRRHCRLRH-----E---ACHICDMVGPIRYQYFKS-YEDLEAHFRNAH-----------------------  275 (493)
T ss_pred             ceecChHHHHHHHHhhh-----h---hhhhhhccCccchhhhhC-HHHHHHHhhcCc-----------------------
Confidence            88888888888887643     2   34444222    234444 667777776665                       


Q ss_pred             cCeeecCC--Cc----ccccchhhhHhHhhhcccCCCCCCCCC
Q psy12199        329 VQYFLCEL--CD----KTSIHYTYLCLHKKLKHSNLTYGGESP  365 (597)
Q Consensus       329 ~~~~~C~~--C~----~~f~~~~~L~~H~~~~h~~~~~~~~~~  365 (597)
                         |.|.+  |-    .+|.....|..|+...|+....+.+.+
T Consensus       276 ---y~ct~qtc~~~k~~vf~~~~el~~h~~~~h~~~~~~~~~~  315 (493)
T COG5236         276 ---YCCTFQTCRVGKCYVFPYHTELLEHLTRFHKVNARLSEIP  315 (493)
T ss_pred             ---eEEEEEEEecCcEEEeccHHHHHHHHHHHhhcccccCcCC
Confidence               33321  21    456667777777776666554444444

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.63  E-value=0.085  Score=29.47  Aligned_cols=21  Identities=24%  Similarity=0.613  Sum_probs=14.8

Q ss_pred             eecccccccccchhhHHHHHHh
Q psy12199        469 YTCEICSKTYTVEGSLLTHYDM  490 (597)
Q Consensus       469 ~~C~~C~~~f~~~~~L~~H~~~  490 (597)
                      ..|+.||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3577788877 66777777653

>KOG2893|consensus

Probab=92.51  E-value=0.049  Score=48.30  Aligned_cols=46  Identities=30%  Similarity=0.647  Sum_probs=34.6

Q ss_pred             ccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhh-hccc
Q psy12199        190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEH-SVSH  240 (597)
Q Consensus       190 ~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H-~~~H  240 (597)
                      -|.+|++ .|.+..-|.+|++.-    -|+|.+|.+...+--.|..| |++|
T Consensus        12 wcwycnr-efddekiliqhqkak----hfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   12 WCWYCNR-EFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeeeccc-ccchhhhhhhhhhhc----cceeeeehhhhccCCCceeehhhhh
Confidence            3888888 588888888887653    38888888877777777777 5555

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.10  E-value=0.11  Score=28.96  Aligned_cols=21  Identities=24%  Similarity=0.626  Sum_probs=14.4

Q ss_pred             ccCCcChhccCCcHHHHHHhhh
Q psy12199        496 YQCDVCFKEFRSSVTLRNHTRR  517 (597)
Q Consensus       496 y~C~~C~~~F~~~~~L~~H~~~  517 (597)
                      ..|+.||+.| ..+.|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            3577777777 56677777653

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.02  E-value=0.064  Score=55.96  Aligned_cols=62  Identities=31%  Similarity=0.624  Sum_probs=40.7

Q ss_pred             ccccCCCCccCCCChhhHHHHhh--ccCCC--cccccc--cccccccCchhhhhhhccccccCccccCc
Q psy12199        188 QLKCTICNKENFKNQLSLSIHMR--YHENV--REYECE--ICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       188 ~~~C~~C~k~~f~~~~~L~~H~~--~H~~~--k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      ++.|..|.. .|.....|..|.+  .|.++  +++.|+  .|++.|.+...+..|...|.+..++.+..
T Consensus       289 ~~~~~~~~~-~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T COG5048         289 PIKSKQCNI-SFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKL  356 (467)
T ss_pred             CCCCccccC-CccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccc
Confidence            566666666 5666666666666  56666  666666  56666666666666666666666655543

>KOG4173|consensus

Probab=91.96  E-value=0.079  Score=45.98  Aligned_cols=49  Identities=20%  Similarity=0.588  Sum_probs=36.3

Q ss_pred             Cceeccc--ccccccchhhHHHHHHhccCccccCCcChhccCCcHHHHHHhhh
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRR  517 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~~~H~~e~y~C~~C~~~F~~~~~L~~H~~~  517 (597)
                      ..|.|.+  |...|........|..+-++  -.|.+|.+.|.+...|..|+..
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~--~sCs~C~r~~Pt~hLLd~HI~E  128 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG--NSCSFCKRAFPTGHLLDAHILE  128 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc--chhHHHHHhCCchhhhhHHHHH
Confidence            4577877  77888888888888755443  2688888888888888888643

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.39  E-value=0.081  Score=55.20  Aligned_cols=138  Identities=24%  Similarity=0.405  Sum_probs=99.9

Q ss_pred             CCCCCCccCccCCCchhhHhhhh--hccCC--CCCCCCCccccC--hhhhhHHHHHHHHHHhhhhhcccCCCccccCCC-
Q psy12199        122 KIPRCEECDINFPSKMRHTFHLQ--HHLED--PDLPVNFMHECR--ECGSQFADILKHSLETHLSFIHVQDNQLKCTIC-  194 (597)
Q Consensus       122 k~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~~~~~~~C~--~C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~~C-  194 (597)
                      .++.|..|...|.....|..|.+  .|.++  .+      +.|+  .|++.|.  ....+..|.. .|.+..++.+..- 
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~------~~~p~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~  358 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKP------FSCPYSLCGKLFS--RNDALKRHIL-LHTSISPAKEKLLN  358 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCc------eeeeccCCCcccc--ccccccCCcc-cccCCCcccccccc
Confidence            47899999999999999999999  78888  66      8899  7999998  6778888887 8888777776543 


Q ss_pred             -CccCCCChhh-----HHHHhhccCCCccccccc--ccccccCchhhhhhhccccccC--ccccCccchhhhchHHHHHH
Q psy12199        195 -NKENFKNQLS-----LSIHMRYHENVREYECEI--CKKKFINKSTLKEHSVSHMSVK--PFKCEICGHYLSRASRLRAH  264 (597)
Q Consensus       195 -~k~~f~~~~~-----L~~H~~~H~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~--~~~C~~C~~~f~~~~~L~~H  264 (597)
                       .+ .+.....     .......-.....+.+..  |...+.....+..|...|....  .+.+..|.+.|.....+..|
T Consensus       359 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (467)
T COG5048         359 SSS-KFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPH  437 (467)
T ss_pred             Ccc-ccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccc
Confidence             22 1222111     111111122334455543  7788888888888888777665  46778899999999999999


Q ss_pred             HHhhc
Q psy12199        265 LKAHS  269 (597)
Q Consensus       265 ~~~H~  269 (597)
                      ++.|.
T Consensus       438 ~~~~~  442 (467)
T COG5048         438 KKIHT  442 (467)
T ss_pred             ccccc
Confidence            88876

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.59  E-value=0.18  Score=30.81  Aligned_cols=23  Identities=30%  Similarity=0.564  Sum_probs=17.2

Q ss_pred             ceecccccccccchhhHHHHHHh
Q psy12199        468 PYTCEICSKTYTVEGSLLTHYDM  490 (597)
Q Consensus       468 ~~~C~~C~~~f~~~~~L~~H~~~  490 (597)
                      +|.|++|+..|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888877777777653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.57  E-value=0.18  Score=30.85  Aligned_cols=23  Identities=26%  Similarity=0.603  Sum_probs=18.8

Q ss_pred             eeecCcCccccCChhHHHhhhcc
Q psy12199        548 ILACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      +|.|.+|+..|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888888888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.80  E-value=0.18  Score=30.44  Aligned_cols=9  Identities=44%  Similarity=1.527  Sum_probs=4.4

Q ss_pred             CccccCccc
Q psy12199        244 KPFKCEICG  252 (597)
Q Consensus       244 ~~~~C~~C~  252 (597)
                      .++.|++||
T Consensus        16 ~~~~CP~Cg   24 (33)
T cd00350          16 APWVCPVCG   24 (33)
T ss_pred             CCCcCcCCC
Confidence            344555554

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=89.73  E-value=0.22  Score=30.02  Aligned_cols=10  Identities=20%  Similarity=0.763  Sum_probs=5.8

Q ss_pred             cccccCCCCc
Q psy12199        576 VTLKCQLCNV  585 (597)
Q Consensus       576 ~~~~C~~C~~  585 (597)
                      .|+.|+.||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            4556666654

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=89.15  E-value=0.14  Score=33.99  Aligned_cols=30  Identities=27%  Similarity=0.660  Sum_probs=25.7

Q ss_pred             hccceeecCcCccccCChhHHHhhhcccCC
Q psy12199        544 HGYKILACEKCDVKFTHKALLAEHINTKHN  573 (597)
Q Consensus       544 ~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~  573 (597)
                      -||-.++|+.|+..|....++.+|+...|.
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            477789999999999999999999987674

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.85  E-value=2  Score=34.58  Aligned_cols=27  Identities=26%  Similarity=0.621  Sum_probs=24.5

Q ss_pred             Cceec----ccCccccCChhhHHhHhhhccC
Q psy12199        418 KSVTC----SVCEKAFSSKENCKAHYTRQHG  444 (597)
Q Consensus       418 ~~~~C----~~C~~~f~~~~~L~~H~~~~h~  444 (597)
                      ..|.|    ..|++.+.+...|..|++..|+
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            45999    9999999999999999998874

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=87.45  E-value=1.2  Score=35.81  Aligned_cols=27  Identities=15%  Similarity=0.255  Sum_probs=20.5

Q ss_pred             cCeeec----CCCcccccchhhhHhHhhhcc
Q psy12199        329 VQYFLC----ELCDKTSIHYTYLCLHKKLKH  355 (597)
Q Consensus       329 ~~~~~C----~~C~~~f~~~~~L~~H~~~~h  355 (597)
                      ...|.|    ..|++.+.+...+..|++.+|
T Consensus        78 ~~G~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   78 YDGYRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             CCCeeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            355888    888888888888888887655

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG4173|consensus

Probab=86.75  E-value=0.3  Score=42.53  Aligned_cols=78  Identities=31%  Similarity=0.707  Sum_probs=63.6

Q ss_pred             Cceeccc--CccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhcCCCceecccccccccchhhHHHHHHh-c---
Q psy12199        418 KSVTCSV--CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDM-H---  491 (597)
Q Consensus       418 ~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~-H---  491 (597)
                      ..+.|++  |...|.+......|+...|++                        .|.+|.+.|.+..-|..|+.. |   
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~------------------------sCs~C~r~~Pt~hLLd~HI~E~HDs~  133 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN------------------------SCSFCKRAFPTGHLLDAHILEWHDSL  133 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc------------------------hhHHHHHhCCchhhhhHHHHHHHHHH
Confidence            4578886  788999999999998878875                        599999999999999999754 2   


Q ss_pred             ------cCc-cccCCc--ChhccCCcHHHHHHhhhcC
Q psy12199        492 ------SGE-FYQCDV--CFKEFRSSVTLRNHTRRHD  519 (597)
Q Consensus       492 ------~~e-~y~C~~--C~~~F~~~~~L~~H~~~H~  519 (597)
                            .|. .|+|-+  |+..|.+...-..|+-.-+
T Consensus       134 Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  134 FQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             HHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhc
Confidence                  234 699965  9999999999999975533

>KOG2893|consensus

Probab=86.42  E-value=0.3  Score=43.54  Aligned_cols=51  Identities=29%  Similarity=0.563  Sum_probs=34.1

Q ss_pred             CCCCCCcCccCCCCHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCcccccCccCceecccCccccCChhhHHhHhhhc
Q psy12199        363 ESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQ  442 (597)
Q Consensus       363 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~  442 (597)
                      .++.|-+|++.|.....|.+|++.                               +-|+|.+|.+...+--.|..|-..+
T Consensus         9 ~kpwcwycnrefddekiliqhqka-------------------------------khfkchichkkl~sgpglsihcmqv   57 (341)
T KOG2893|consen    9 DKPWCWYCNREFDDEKILIQHQKA-------------------------------KHFKCHICHKKLFSGPGLSIHCMQV   57 (341)
T ss_pred             CCceeeecccccchhhhhhhhhhh-------------------------------ccceeeeehhhhccCCCceeehhhh
Confidence            344677777777777777777764                               3477777777766666666665545


Q ss_pred             cC
Q psy12199        443 HG  444 (597)
Q Consensus       443 h~  444 (597)
                      |.
T Consensus        58 hk   59 (341)
T KOG2893|consen   58 HK   59 (341)
T ss_pred             hh
Confidence            53

>TIGR00622 ssl1 transcription factor ssl1

Probab=85.33  E-value=1.1  Score=35.53  Aligned_cols=49  Identities=14%  Similarity=0.276  Sum_probs=29.6

Q ss_pred             ccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhhc
Q psy12199        219 ECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       219 ~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      .|--|+..|........=.  -.....|.|+.|...|-..-++-.|...|.
T Consensus        57 ~C~~C~~~f~~~~~~~~~~--~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        57 FCFGCQGPFPKPPVSPFDE--LKDSHRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             cccCcCCCCCCcccccccc--cccccceeCCCCCCccccccchhhhhhccC
Confidence            3777888776543211000  112335888888888877777777776663

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>TIGR00622 ssl1 transcription factor ssl1

Probab=83.90  E-value=3.5  Score=32.85  Aligned_cols=94  Identities=20%  Similarity=0.412  Sum_probs=52.0

Q ss_pred             CCCcCccCCCCHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCcccccCccCceecccCccccCChhhHHhHhhhccCC
Q psy12199        366 VCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGN  445 (597)
Q Consensus       366 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~  445 (597)
                      .|+.||.+..+...|.+-.  +|..+..+-            ..+... .......|--|...|.......       .+
T Consensus        17 ~CpiCgLtLVss~HLARSy--HHLfPl~~f------------~ev~~~-~~~~~~~C~~C~~~f~~~~~~~-------~~   74 (112)
T TIGR00622        17 ECPICGLTLILSTHLARSY--HHLFPLKAF------------QEIPLE-EYNGSRFCFGCQGPFPKPPVSP-------FD   74 (112)
T ss_pred             cCCcCCCEEeccchHHHhh--hccCCCccc------------cccccc-ccCCCCcccCcCCCCCCccccc-------cc
Confidence            8999999998888887753  343222111            000000 0112234888888886543111       00


Q ss_pred             CCCCCCCCCCCcchhhhhcCCCceecccccccccchhhHHHHHHhccCccccCCcCh
Q psy12199        446 KEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCF  502 (597)
Q Consensus       446 ~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~e~y~C~~C~  502 (597)
                      +                +.....|+|+.|...|=..-++-.|...|.     |+-|.
T Consensus        75 ~----------------~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~-----CPGC~  110 (112)
T TIGR00622        75 E----------------LKDSHRYVCAVCKNVFCVDCDVFVHESLHC-----CPGCI  110 (112)
T ss_pred             c----------------cccccceeCCCCCCccccccchhhhhhccC-----CcCCC
Confidence            0                011146888888888877777777766664     66554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=80.11  E-value=1.2  Score=26.99  Aligned_cols=10  Identities=30%  Similarity=0.889  Sum_probs=6.0

Q ss_pred             cccccCCCCc
Q psy12199        576 VTLKCQLCNV  585 (597)
Q Consensus       576 ~~~~C~~C~~  585 (597)
                      .|..|+.||.
T Consensus        17 ~p~~CP~Cg~   26 (34)
T cd00729          17 APEKCPICGA   26 (34)
T ss_pred             CCCcCcCCCC
Confidence            4556666665

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	597
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		4e-11
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-10
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-08
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-08
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-05
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		7e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		9e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		7e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-05
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		8e-05
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-04
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-04
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-04
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		5e-04
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		7e-04

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 189 LKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
             C IC K +FK   +LS H+  H + R Y C+ C K+F  KS +K+H+  H   KP KC
Sbjct: 2   FDCKICGK-SFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 249 EICGHYLSRASRLRAHLKAHS 269
           ++CG   S++S L  H + H+
Sbjct: 61  QVCGKAFSQSSNLITHSRKHT 81

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 62/146 (42%), Gaps = 12/146 (8%)
Query: 125 RCEECDINFPSKMRHTFHLQHHL-EDPDLPVNFMHECRECGSQFADILKHSLETHLSFIH 183
           +C EC  +F  K   T H + H  E P       ++C ECG  F+   + +L  H    H
Sbjct: 51  KCPECGKSFSDKKDLTRHQRTHTGEKP-------YKCPECGKSFSQ--RANLRAHQR-TH 100
Query: 184 VQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSV 243
             +    C  C K +F     L  H R H   + Y+C  C K F  +  L  H  +H   
Sbjct: 101 TGEKPYACPECGK-SFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE 159
Query: 244 KPFKCEICGHYLSRASRLRAHLKAHS 269
           KP+KC  CG   SR   L  H + H+
Sbjct: 160 KPYKCPECGKSFSRRDALNVHQRTHT 185

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 52/131 (39%), Gaps = 5/131 (3%)
Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FS 522
           KPY C  C K+++    L  H   H+GE  Y+C  C K F     L  H R H     + 
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK 79
Query: 523 CDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL 582
           C EC         LR H     G K  AC +C   F+  A L  H  T H  +   KC  
Sbjct: 80  CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-HTGEKPYKCPE 138
Query: 583 CNVVVLIEEVI 593
           C      E+ +
Sbjct: 139 CGKSFSREDNL 149

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
           KC +C K  F  +  L  HMR H  V+ Y+C+ C     + S+L +H   H   +PFKC+
Sbjct: 10  KCEVCGK-CFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 250 ICGHYLSRASRLRAHLKAHS 269
           IC +    +S+L  HL++H+
Sbjct: 69  ICPYASRNSSQLTVHLRSHT 88

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 189 LKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
            KC  C K +F    +L  H R H   + Y+C  C K F   S L++H  +H   KP+KC
Sbjct: 5   YKCPECGK-SFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKC 63
Query: 249 EICGHYLSRASRLRAHLKAH 268
             CG   SR+  L  H + H
Sbjct: 64  PECGKSFSRSDHLSRHQRTH 83

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FS 522
           KPY C  C K+++   +L  H   H+GE  Y+C  C K F  S  L+ H R H     + 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 523 CDECSVECQDLNALRMH 539
           C EC       + L  H
Sbjct: 63  CPECGKSFSRSDHLSRH 79

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 194 CNKENFKNQLS-LSIHMRYHENVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKCEI 250
           CNK  FK  LS L +H R H   + Y+C+   C+++F     LK H   H  VKPF+C+ 
Sbjct: 14  CNKRYFK--LSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT 71
Query: 251 CGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQ-VFPSNEENLRKH 300
           C    SR+     HLK H+   +  K  +C+  +  CQ  F  ++E +R H
Sbjct: 72  CQRKFSRSD----HLKTHTRTHTGEKPFSCR--WPSCQKKFARSDELVRHH 116

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 197 ENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS 256
             F    SL+ H+R H   + ++C IC + F     L  H  +H   KPF C+ICG   +
Sbjct: 14  RRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 73
Query: 257 RASRLRAHLKAH 268
           R+   + H K H
Sbjct: 74  RSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 467 KPYTC--EICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN--- 520
           +PY C  E C + ++  GSL  H  +H+G+  +QC +C + F  S  L  H R H     
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 521 FSCDECSVECQDLNALRMHT 540
           F+CD C  +    +  + HT
Sbjct: 63  FACDICGRKFARSDERKRHT 82

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 191 CTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI 250
           C  C + +F    +L IH R H + R Y C+IC K F  +  L++H   H   KPFKC+ 
Sbjct: 20  CKFCGR-HFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE 78
Query: 251 CGHYLSRASRLRAHLKAHSVVAS 273
           CG    ++  L  H   H   +S
Sbjct: 79  CGKGFCQSRTLAVHKTLHMQTSS 101

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 197 ENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS 256
             F +  +L+ H+R H   + ++C IC + F     L  H  +H   KPF C+ICG   +
Sbjct: 14  RRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 73
Query: 257 RASRLRAHLKAH 268
           R+   + H K H
Sbjct: 74  RSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 197 ENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS 256
             F     L+ H+R H   + ++C IC + F     L  H  +H   KPF C+ICG   +
Sbjct: 14  RRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 73
Query: 257 RASRLRAHLKAH 268
           R+   + H K H
Sbjct: 74  RSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 197 ENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS 256
             F     L+ H+R H   + ++C IC + F     L  H  +H   KPF C+ICG   +
Sbjct: 14  RRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 73
Query: 257 RASRLRAHLKAH 268
           R+   + H K H
Sbjct: 74  RSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 197 ENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS 256
             F     L+ H+R H   + ++C IC + F     L  H  +H   KPF C+ICG   +
Sbjct: 14  RRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 73
Query: 257 RASRLRAHLKAH 268
           R+   + H K H
Sbjct: 74  RSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 197 ENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS 256
             F     L+ H+R H   + ++C IC + F     L  H  +H   KPF C+ICG   +
Sbjct: 13  RRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 72
Query: 257 RASRLRAHLKAH 268
           R+   + H K H
Sbjct: 73  RSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 197 ENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS 256
             F     L+ H+R H   + ++C IC + F     L  H  +H   KPF C+ICG   +
Sbjct: 14  RRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFA 73
Query: 257 RASRLRAHLKAH 268
           R+   + H K H
Sbjct: 74  RSDERKRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 199 FKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRA 258
           F  + +L  H+R H   + ++C IC + F  +++L  H  +H   KPF C+ICG   +  
Sbjct: 16  FSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFATL 75
Query: 259 SRLRAHLKAH 268
                H K H
Sbjct: 76  HTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 467 KPYTC--EICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN--- 520
           +PY C  E C + ++ + +L TH  +H+G+  +QC +C + F    +L  H R H     
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKP 62
Query: 521 FSCDECSVECQDLNALRMHT 540
           F+CD C  +   L+    HT
Sbjct: 63  FACDICGRKFATLHTRTRHT 82

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 199 FKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRA 258
           F  + +L  H+R H   + ++C IC + F   + L +H  +H   KPF C+ICG   +  
Sbjct: 16  FSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFATL 75
Query: 259 SRLRAHLKAH 268
                H K H
Sbjct: 76  HTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 467 KPYTC--EICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN--- 520
           +PY C  E C + ++ + +L TH  +H+G+  +QC +C + F     L  H R H     
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKP 62
Query: 521 FSCDECSVECQDLNALRMHT 540
           F+CD C  +   L+    HT
Sbjct: 63  FACDICGRKFATLHTRDRHT 82

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 220 CEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAH-SVVASNNKVQ 278
           CEIC K F +   L  H +SH   KP+ C +CG    R  R+  H+++H   V      Q
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 279 NCKKCFKCCQVFPSNEENLRKHFEKVH 305
           +C K F       S  ++L  H ++VH
Sbjct: 70  SCGKGF-------SRPDHLNGHIKQVH 89

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN 520
           KPY C+ C  ++  +G+L +H  +H+GE  Y+C++C  +F     L+ HTR H  
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 161 RECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKE-------NFKNQLSLSIHMRYHE 213
           + C   F+ +  H L TH++  HV   +    +C  E       +FK +  L  H+R H 
Sbjct: 29  KSCDRTFSTM--HELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 214 NVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKCEI--CGHYLSRASRLRAHLKAHS 269
             + + C    C K F     LK H  +H   KPFKCE   C    + +S  + H+  H+
Sbjct: 87  GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146
Query: 270 VVASN 274
              S 
Sbjct: 147 SDKSG 151

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 205 LSIHMRYHENVREYEC--EICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLR 262
           L  H+R H   + Y+C  E C  +F     L  H   H   KPF+C +C    SR+  L 
Sbjct: 33  LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92
Query: 263 AHLKAH 268
            H+K H
Sbjct: 93  LHMKRH 98

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 182 IHVQDNQLKC--TICNKE--NFKNQLSLSIHMRYHENVREYEC--EICKKKFINKSTLKE 235
           IH +  +  C    C++E   FK Q  L +HMR H   + ++C  E C+K +     LK 
Sbjct: 28  IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKT 87
Query: 236 HSVSHMSVKPFKC--EICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSN 293
           H  SH   KP+ C  E C    S AS    H    +   SN K   CK     C    ++
Sbjct: 88  HLRSHTGEKPYMCEHEGCSKAFSNASDRAKH---QNRTHSNEKPYVCK--LPGCTKRYTD 142
Query: 294 EENLRKHFEKVH 305
             +LRKH + VH
Sbjct: 143 PSSLRKHVKTVH 154

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 157 MHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTI--CNKENFKNQLSLSIHMRYHEN 214
           +H C ECG  F +  K  L+ H   +H  +   +CT   C K  F    +L  H+R H  
Sbjct: 34  VHVCAECGKAFVESSK--LKRH-QLVHTGEKPFQCTFEGCGKR-FSLDFNLRTHVRIHTG 89
Query: 215 VREYEC--EICKKKFINKSTLKEHSVSHMSVK 244
            R Y C  + C KKF   + LK H ++H   K
Sbjct: 90  DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 199 FKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC--EICGHYLS 256
           F++  ++  H+  H   R + C  C K F+  S LK H + H   KPF+C  E CG   S
Sbjct: 17  FRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS 75
Query: 257 RASRLRAHLKAHS 269
               LR H++ H+
Sbjct: 76  LDFNLRTHVRIHT 88

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 162 ECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECE 221
           +CG  F    K   + H+S +H+      C +C K+ FK +  L  HM+ H  ++ YEC 
Sbjct: 14  QCGKSFTH--KSQRDRHMS-MHLGLRPYGCGVCGKK-FKMKHHLVGHMKIHTGIKPYECN 69
Query: 222 ICKKKFINKSTLKEHSVS 239
           IC K+F+ + +   H  S
Sbjct: 70  ICAKRFMWRDSFHRHVTS 87

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 216 REYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVA 272
           R Y+C+ C K F + S L +H  +H   KP+KC+ CG    + S L  H + H+   
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 205 LSIHMRYHENVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLR 262
           L  H+R H   + Y C+   C  KF     L  H   H   +PF+C+ C    SR+  L 
Sbjct: 23  LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA 82
Query: 263 AHLKAH 268
            H+K H
Sbjct: 83  LHMKRH 88

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 419 SVTCSVCEKAFSSKENCKAHYTRQHGNKEPKE-PKSGEGLPALEQLLKMKP--------- 468
            V C  C K F SK   K H  R+H  ++P E PK G+     E LL+ +          
Sbjct: 7   GVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65
Query: 469 -YTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNH 514
            +TC +C +T+     L  H   H+GE  Y+C  C ++F     L++H
Sbjct: 66  VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	597
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-11
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-11
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-10
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	8e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	9e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	8e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	8e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	8e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 204 SLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHM--SVKPFKCEICGHYLSRASRL 261
           S     R H   + YEC IC  +F    T+K H +     +V  F C  C   ++R S L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 262 RAHLK 266
             HL+
Sbjct: 62  GVHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.8 bits (133), Expect = 6e-10
 Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 3/55 (5%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF---YQCDVCFKEFRSSVTLRNHTRRH 518
           KPY C IC   +T  G++  H      E    + C  C         L  H R+ 
Sbjct: 14  KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 13/75 (17%), Positives = 18/75 (24%), Gaps = 20/75 (26%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTV 480
            C +C   F+     K H   Q            E          +  + C  C      
Sbjct: 17  ECYICHARFTQSGTMKMH-ILQK---------HTE---------NVAKFHCPHCDTVIAR 57

Query: 481 EGSLLTHY-DMHSGE 494
           +  L  H    HS  
Sbjct: 58  KSDLGVHLRKQHSYS 72

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.9 bits (102), Expect = 9e-06
 Identities = 21/94 (22%), Positives = 30/94 (31%), Gaps = 28/94 (29%)

Query: 482 GSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHT 540
           GS  +    HSGE  Y+C +C   F  S T++ H  +                       
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK---------------------- 38

Query: 541 LREHG--YKILACEKCDVKFTHKALLAEHINTKH 572
              H        C  CD     K+ L  H+  +H
Sbjct: 39  ---HTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 6/74 (8%)

Query: 232 TLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFP 291
           +      +H   KP++C IC    +++  ++ H+        N    +C  C        
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH--TENVAKFHCPHCDTVI---- 55

Query: 292 SNEENLRKHFEKVH 305
           + + +L  H  K H
Sbjct: 56  ARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.5 bits (88), Expect = 9e-04
 Identities = 15/81 (18%), Positives = 24/81 (29%), Gaps = 34/81 (41%)

Query: 158 HECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYH--ENV 215
           +EC  C ++F         T                          ++ +H+     ENV
Sbjct: 16  YECYICHARF---------TQSG-----------------------TMKMHILQKHTENV 43

Query: 216 REYECEICKKKFINKSTLKEH 236
            ++ C  C      KS L  H
Sbjct: 44  AKFHCPHCDTVIARKSDLGVH 64

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 15/124 (12%)

Query: 158 HECRECGSQFADILKHSLETHLSFIHVQ--------DNQLKCTICNKENFKNQLSLSIHM 209
              + C   F+    H L TH++  HV             +C    K +FK +  L  H+
Sbjct: 26  RPKKSCDRTFST--MHELVTHVTMEHVGGPEQNNHVCYWEECPREGK-SFKAKYKLVNHI 82

Query: 210 RYHENVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKCEI--CGHYLSRASRLRAHL 265
           R H   + + C    C K F     LK H  +H   KPFKCE   C    + +S  + H+
Sbjct: 83  RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142

Query: 266 KAHS 269
             H+
Sbjct: 143 HVHT 146

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 11/131 (8%)

Query: 125 RCEECDINFPSKMRHTFHLQ-HHLEDP--DLPVNFMHECRECGSQFADILKHSLETHLSF 181
             + CD  F +      H+   H+  P  +  V +  EC   G  F    K+ L  H+  
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK--AKYKLVNHIR- 83

Query: 182 IHVQDNQLKCTI--CNKENFKNQLSLSIHMRYHENVREYECEI--CKKKFINKSTLKEHS 237
           +H  +    C    C K  F    +L IH R H   + ++CE   C ++F N S  K+H 
Sbjct: 84  VHTGEKPFPCPFPGCGKI-FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142

Query: 238 VSHMSVKPFKC 248
             H S K    
Sbjct: 143 HVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 48.1 bits (115), Expect = 9e-07
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 21/122 (17%)

Query: 418 KSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLP---------ALEQLLK-M- 466
            S     C++ FS+      H T +H     +                  A  +L+  + 
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 467 -----KPYTCEI--CSKTYTVEGSLLTHYDMHSGEF-YQCDV--CFKEFRSSVTLRNHTR 516
                KP+ C    C K +    +L  H   H+GE  ++C+   C + F +S   + H  
Sbjct: 84  VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 143

Query: 517 RH 518
            H
Sbjct: 144 VH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 19/122 (15%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGE----------FYQCDVCFKEFRSSVTLRNHTR 516
                + C +T++    L+TH  M              + +C    K F++   L NH R
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 517 RHDN---FSCD--ECSVECQDLNALRMHTLREH-GYKILAC--EKCDVKFTHKALLAEHI 568
            H     F C    C         L++H  R H G K   C  E CD +F + +   +H+
Sbjct: 84  VHTGEKPFPCPFPGCGKIFARSENLKIH-KRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142

Query: 569 NT 570
           + 
Sbjct: 143 HV 144

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 19/108 (17%), Positives = 28/108 (25%), Gaps = 25/108 (23%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFK---------CEICGHYLSR 257
                 E       + C + F     L  H        P +         C   G     
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 258 ASRLRAHLKAHSVVASNNK-----VQNCKKCFKCCQVFPSNEENLRKH 300
             +L  H++ H    +  K        C K F       +  ENL+ H
Sbjct: 75  KYKLVNHIRVH----TGEKPFPCPFPGCGKIF-------ARSENLKIH 111

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 61.3 bits (150), Expect = 5e-11
 Identities = 47/148 (31%), Positives = 62/148 (41%), Gaps = 20/148 (13%)

Query: 126 CEECDINFPSKMRHTFHLQHHL-----EDPDLPVNFMHECRECGSQFADILKHSLETHLS 180
           C EC  +F      + HL  H      E P       ++C ECG  F+D  K  L  H  
Sbjct: 24  CPECGKSF----SRSDHLAEHQRTHTGEKP-------YKCPECGKSFSD--KKDLTRHQR 70

Query: 181 FIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSH 240
             H  +   KC  C K +F  + +L  H R H   + Y C  C K F   + L+ H  +H
Sbjct: 71  -THTGEKPYKCPECGK-SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH 128

Query: 241 MSVKPFKCEICGHYLSRASRLRAHLKAH 268
              KP+KC  CG   SR   L  H + H
Sbjct: 129 TGEKPYKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 60.9 bits (149), Expect = 6e-11
 Identities = 43/148 (29%), Positives = 57/148 (38%), Gaps = 20/148 (13%)

Query: 126 CEECDINFPSKMRHTFHLQHHL-----EDPDLPVNFMHECRECGSQFADILKHSLETHLS 180
           C EC  +F         L  H      E P       ++C ECG  F+   + +L  H  
Sbjct: 52  CPECGKSF----SDKKDLTRHQRTHTGEKP-------YKCPECGKSFSQ--RANLRAHQR 98

Query: 181 FIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSH 240
             H  +    C  C K +F     L  H R H   + Y+C  C K F  +  L  H  +H
Sbjct: 99  -THTGEKPYACPECGK-SFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH 156

Query: 241 MSVKPFKCEICGHYLSRASRLRAHLKAH 268
              KP+KC  CG   SR   L  H + H
Sbjct: 157 TGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 59.8 bits (146), Expect = 2e-10
 Identities = 47/155 (30%), Positives = 63/155 (40%), Gaps = 33/155 (21%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTV 480
            C  C K+FS  ++   H  R H         +GE           KPY C  C K+++ 
Sbjct: 23  ACPECGKSFSRSDHLAEHQ-RTH---------TGE-----------KPYKCPECGKSFSD 61

Query: 481 EGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECS---VECQDL 533
           +  L  H   H+GE  Y+C  C K F     LR H R H     ++C EC     +   L
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121

Query: 534 NA-LRMHTLREHGYKILACEKCDVKFTHKALLAEH 567
            A  R HT  E  YK   C +C   F+ +  L  H
Sbjct: 122 RAHQRTHT-GEKPYK---CPECGKSFSREDNLHTH 152

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 58.6 bits (143), Expect = 3e-10
 Identities = 46/151 (30%), Positives = 60/151 (39%), Gaps = 27/151 (17%)

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           C  C K+FS K++   H  R H         +GE           KPY C  C K+++  
Sbjct: 52  CPECGKSFSDKKDLTRHQ-RTH---------TGE-----------KPYKCPECGKSFSQR 90

Query: 482 GSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDECSVECQDLNALR 537
            +L  H   H+GE  Y C  C K F     LR H R H     + C EC       + L 
Sbjct: 91  ANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLH 150

Query: 538 MHTLREH-GYKILACEKCDVKFTHKALLAEH 567
            H  R H G K   C +C   F+ +  L  H
Sbjct: 151 TH-QRTHTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 58.2 bits (142), Expect = 5e-10
 Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 158 HECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVRE 217
           + C ECG  F+      L  H    H  +   KC  C K +F ++  L+ H R H   + 
Sbjct: 22  YACPECGKSFSR--SDHLAEHQR-THTGEKPYKCPECGK-SFSDKKDLTRHQRTHTGEKP 77

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAH 268
           Y+C  C K F  ++ L+ H  +H   KP+ C  CG   S+ + LRAH + H
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH 128

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 55.5 bits (135), Expect = 4e-09
 Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 25/110 (22%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTV 480
            C  C K+FS + N +AH  R H         +GE           KPY C  C K+++ 
Sbjct: 79  KCPECGKSFSQRANLRAHQ-RTH---------TGE-----------KPYACPECGKSFSQ 117

Query: 481 EGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDEC 526
              L  H   H+GE  Y+C  C K F     L  H R H     + C EC
Sbjct: 118 LAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPEC 167

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 54.8 bits (133), Expect = 7e-09
 Identities = 36/109 (33%), Positives = 46/109 (42%), Gaps = 12/109 (11%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FS 522
           KPY C  C K+++    L  H   H+GE  Y+C  C K F     L  H R H     + 
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK 79

Query: 523 CDECS---VECQDLNA-LRMHTLREHGYKILACEKCDVKFTHKALLAEH 567
           C EC     +  +L A  R HT  E  Y    C +C   F+  A L  H
Sbjct: 80  CPECGKSFSQRANLRAHQRTHT-GEKPYA---CPECGKSFSQLAHLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.8 bits (128), Expect = 4e-08
 Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 22/99 (22%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTV 480
            C  C K+FS   + +AH  R H         +GE           KPY C  C K+++ 
Sbjct: 107 ACPECGKSFSQLAHLRAHQ-RTH---------TGE-----------KPYKCPECGKSFSR 145

Query: 481 EGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
           E +L TH   H+GE  Y+C  C K F     L  H R H
Sbjct: 146 EDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 49.4 bits (119), Expect = 6e-07
 Identities = 20/70 (28%), Positives = 24/70 (34%)

Query: 199 FKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRA 258
                S           + Y C  C K F     L EH  +H   KP+KC  CG   S  
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 259 SRLRAHLKAH 268
             L  H + H
Sbjct: 63  KDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 47.1 bits (113), Expect = 3e-06
 Identities = 60/276 (21%), Positives = 88/276 (31%), Gaps = 99/276 (35%)

Query: 227 FINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKC 286
               S+    +      KP+ C  CG   SR+  L  H + H+      K   C +C K 
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHT----GEKPYKCPECGKS 58

Query: 287 CQVFPSNEENLRKHF-----EKVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTS 341
              F S++++L +H      EK                            + C  C K+ 
Sbjct: 59  ---F-SDKKDLTRHQRTHTGEK---------------------------PYKCPECGKSF 87

Query: 342 IHYTYLCLHKKLKHSNLTYGGESP-VCEPCNLTFKNEWQYLVHNRAVH--ELPPEPNSGA 398
                L  H++  H+     GE P  C  C  +F        H R  H  E         
Sbjct: 88  SQRANLRAHQRT-HT-----GEKPYACPECGKSFSQLAHLRAHQR-THTGE--------- 131

Query: 399 GSVLQNNPYPPLRKAKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLP 458
                  PY              C  C K+FS ++N   H  R H         +GE   
Sbjct: 132 ------KPY-------------KCPECGKSFSREDNLHTHQ-RTH---------TGE--- 159

Query: 459 ALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGE 494
                   KPY C  C K+++   +L  H   H+G+
Sbjct: 160 --------KPYKCPECGKSFSRRDALNVHQRTHTGK 187

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.2 bits (103), Expect = 7e-05
 Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 20/125 (16%)

Query: 126 CEECDINFPSKMRHTFHLQHHL-----EDPDLPVNFMHECRECGSQFADILKHSLETHLS 180
           C EC  +F        +L+ H      E P       + C ECG  F+      L  H  
Sbjct: 80  CPECGKSF----SQRANLRAHQRTHTGEKP-------YACPECGKSFSQ--LAHLRAHQR 126

Query: 181 FIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSH 240
             H  +   KC  C K +F  + +L  H R H   + Y+C  C K F  +  L  H  +H
Sbjct: 127 -THTGEKPYKCPECGK-SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

Query: 241 MSVKP 245
              K 
Sbjct: 185 TGKKT 189

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 58.2 bits (142), Expect = 5e-11
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 190 KCTI--CNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFK 247
            C +  C++  F    SL+ H+R H   + ++C IC + F     L  H  +H   KPF 
Sbjct: 6   ACPVESCDR-RFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 248 CEICGHYLSRASRLRAHLKAH 268
           C+ICG   +R+   + H K H
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 55.6 bits (135), Expect = 4e-10
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 22/95 (23%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSL 484
           C++ FS   +   H  R H         +G+           KP+ C IC + ++    L
Sbjct: 12  CDRRFSQSGSLTRH-IRIH---------TGQ-----------KPFQCRICMRNFSRSDHL 50

Query: 485 LTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
            TH   H+GE  + CD+C ++F  S   + HT+ H
Sbjct: 51  TTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.1 bits (108), Expect = 2e-06
 Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 28/107 (26%)

Query: 467 KPYTCEI--CSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHDNFSC 523
           +PY C +  C + ++  GSL  H  +H+G+  +QC +C + F  S  L  H         
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH--------- 53

Query: 524 DECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINT 570
                       +R HT    G K  AC+ C  KF        H   
Sbjct: 54  ------------IRTHT----GEKPFACDICGRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 40.9 bits (97), Expect = 7e-05
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 21/74 (28%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTV 480
            C +C + FS  ++   H  R H         +GE           KP+ C+IC + +  
Sbjct: 36  QCRICMRNFSRSDHLTTH-IRTH---------TGE-----------KPFACDICGRKFAR 74

Query: 481 EGSLLTHYDMHSGE 494
                 H  +H  +
Sbjct: 75  SDERKRHTKIHLRQ 88

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 57.0 bits (139), Expect = 1e-10
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
            C IC K +FK   +LS H+  H + R Y C+ C K+F  KS +K+H+  H   KP KC+
Sbjct: 3   DCKICGK-SFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 250 ICGHYLSRASRLRAHLKAH 268
           +CG   S++S L  H + H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 50.5 bits (122), Expect = 2e-08
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 22/98 (22%)

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           C +C K+F        H    H         S             +PY C+ C K +  +
Sbjct: 4   CKICGKSFKRSSTLSTH-LLIH---------SDT-----------RPYPCQYCGKRFHQK 42

Query: 482 GSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
             +  H  +H+GE  ++C VC K F  S  L  H+R+H
Sbjct: 43  SDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 43.6 bits (104), Expect = 6e-06
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAH 268
           ++C+IC K F   STL  H + H   +P+ C+ CG    + S ++ H   H
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH 52

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 43.6 bits (104), Expect = 7e-06
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 469 YTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCD 524
           + C+IC K++    +L TH  +HS    Y C  C K F     ++ HT  H       C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 525 EC 526
            C
Sbjct: 62  VC 63

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 58.3 bits (142), Expect = 1e-10
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 12/119 (10%)

Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEH---SVSHMSVKPF 246
           +C  C+K  F ++  L +H R H   + +EC  C K +  K  L EH   +  + S + F
Sbjct: 9   ECPTCHK-KFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 247 KCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVH 305
            C +C     R   LR H+ +H    +      C  C +    F   +++L+ H  K+H
Sbjct: 68  TCSVCQETFRRRMELRLHMVSH----TGEMPYKCSSCSQQ---F-MQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 159 ECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRY---HENV 215
           EC  C  +F    K+ L+ H    H  +   +C  C K  +  + +L  H      + + 
Sbjct: 9   ECPTCHKKFLS--KYYLKVHNR-KHTGEKPFECPKCGK-CYFRKENLLEHEARNCMNRSE 64

Query: 216 REYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAH 264
           + + C +C++ F  +  L+ H VSH    P+KC  C     +   L++H
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 28/116 (24%)

Query: 418 KSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKT 477
             V C  C K F SK   K H  R+H         +GE           KP+ C  C K 
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHN-RKH---------TGE-----------KPFECPKCGKC 44

Query: 478 YTVEGSLLTH---YDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDEC 526
           Y  + +LL H     M+  E  + C VC + FR  + LR H   H     + C  C
Sbjct: 45  YFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSC 100

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 53.7 bits (130), Expect = 5e-09
 Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 9/109 (8%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN----- 520
               C  C K +  +  L  H   H+GE  ++C  C K +     L  H  R+       
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65

Query: 521 -FSCDECSVECQDLNALRMHTLREH-GYKILACEKCDVKFTHKALLAEH 567
            F+C  C    +    LR+H +  H G     C  C  +F  K  L  H
Sbjct: 66  VFTCSVCQETFRRRMELRLH-MVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 50.2 bits (121), Expect = 9e-08
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 21/118 (17%)

Query: 126 CEECDINFPSKMRHTFHLQHHL-----EDPDLPVNFMHECRECGSQFADILKHSLETH-- 178
           C  C   F       ++L+ H      E P        EC +CG  +    K +L  H  
Sbjct: 10  CPTCHKKF----LSKYYLKVHNRKHTGEKP-------FECPKCGKCYFR--KENLLEHEA 56

Query: 179 LSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEH 236
            + ++  +    C++C +  F+ ++ L +HM  H     Y+C  C ++F+ K  L+ H
Sbjct: 57  RNCMNRSEQVFTCSVCQE-TFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 49.4 bits (119), Expect = 1e-07
 Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 23/100 (23%)

Query: 421 TCSVCEKAFSSKENCKAH--YTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTY 478
            C  C K +  KEN   H      +           E           + +TC +C +T+
Sbjct: 37  ECPKCGKCYFRKENLLEHEARNCMN---------RSE-----------QVFTCSVCQETF 76

Query: 479 TVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRR 517
                L  H   H+GE  Y+C  C ++F     L++H  +
Sbjct: 77  RRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.4 bits (106), Expect = 9e-06
 Identities = 20/47 (42%), Positives = 24/47 (51%)

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAH 264
            EC  C KKF++K  LK H+  H   KPF+C  CG    R   L  H
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 41/165 (24%), Positives = 60/165 (36%), Gaps = 35/165 (21%)

Query: 125 RCEECDINFPSKMRHTFHLQHHL--------EDPDLPVNFMHECRECGS-----QFADIL 171
           R + C   F S+      L HH+                    C   G       F    
Sbjct: 5   RWDGCSQEFDSQE----QLVHHINSEHIHGERKE-------FVCHWGGCSRELRPFKA-- 51

Query: 172 KHSLETHLSFIHVQDNQLKCTI--CNKENFKNQLSLSIHMRYHENVREYECE--ICKKKF 227
           ++ L  H+   H  +   KCT   C K  +    +L  H+R H   + Y CE   C K F
Sbjct: 52  QYMLVVHM-RRHTGEKPHKCTFEGCRKS-YSRLENLKTHLRSHTGEKPYMCEHEGCSKAF 109

Query: 228 INKSTLKEHSV-SHMSVKPFKCEI--CGHYLSRASRLRAHLKAHS 269
            N S   +H   +H + KP+ C++  C    +  S LR H+K   
Sbjct: 110 SNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 51.8 bits (125), Expect = 5e-08
 Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 34/166 (20%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEIC-----S 475
               C + F S+E    H   +H                       K + C         
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEH-------IHGER-----------KEFVCHWGGCSREL 46

Query: 476 KTYTVEGSLLTHYDMHSGEF-YQCDV--CFKEFRSSVTLRNHTRRHDN---FSCDE--CS 527
           + +  +  L+ H   H+GE  ++C    C K +     L+ H R H     + C+   CS
Sbjct: 47  RPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCS 106

Query: 528 VECQDLNALRMHTLREH-GYKILACEK--CDVKFTHKALLAEHINT 570
               + +    H  R H   K   C+   C  ++T  + L +H+ T
Sbjct: 107 KAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 18/123 (14%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYD---MHSGEF-YQCDVC-----FKEFRSSVTLRNHTRR 517
                + CS+ +  +  L+ H +   +H     + C         + F++   L  H RR
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 518 HDN---FSCD--ECSVECQDLNALRMHTLREH-GYKILACE--KCDVKFTHKALLAEHIN 569
           H       C    C      L  L+ H LR H G K   CE   C   F++ +  A+H N
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTH-LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 570 TKH 572
             H
Sbjct: 121 RTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 27/100 (27%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCE--ICSKTYTVEG 482
           C K++S  EN K H  R H         +GE           KPY CE   CSK ++   
Sbjct: 75  CRKSYSRLENLKTH-LRSH---------TGE-----------KPYMCEHEGCSKAFSNAS 113

Query: 483 SLLTHYD-MHSGE-FYQCDV--CFKEFRSSVTLRNHTRRH 518
               H +  HS E  Y C +  C K +    +LR H +  
Sbjct: 114 DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 22/71 (30%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEI--CSKTYTVEG 482
           C KAFS+  +   H  R H         S E           KPY C++  C+K YT   
Sbjct: 105 CSKAFSNASDRAKHQNRTH---------SNE-----------KPYVCKLPGCTKRYTDPS 144

Query: 483 SLLTHYDMHSG 493
           SL  H     G
Sbjct: 145 SLRKHVKTVHG 155

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 57.0 bits (139), Expect = 1e-10
 Identities = 31/98 (31%), Positives = 39/98 (39%), Gaps = 22/98 (22%)

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           C VC K FS K+  K H  R H         +G            KPY C+ C       
Sbjct: 11  CEVCGKCFSRKDKLKTHM-RCH---------TGV-----------KPYKCKTCDYAAADS 49

Query: 482 GSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRH 518
            SL  H  +HS E  ++C +C    R+S  L  H R H
Sbjct: 50  SSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 53.2 bits (129), Expect = 3e-09
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 158 HECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVRE 217
           H+C  CG  F+   K  L+TH+   H      KC  C+     +  SL+ H+R H + R 
Sbjct: 9   HKCEVCGKCFSR--KDKLKTHMR-CHTGVKPYKCKTCDY-AAADSSSLNKHLRIHSDERP 64

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
           ++C+IC     N S L  H  SH        
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 50.1 bits (121), Expect = 4e-08
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FS 522
            P+ CE+C K ++ +  L TH   H+G   Y+C  C      S +L  H R H +   F 
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66

Query: 523 CDEC 526
           C  C
Sbjct: 67  CQIC 70

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 49.3 bits (119), Expect = 9e-08
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS 269
           ++CE+C K F  K  LK H   H  VKP+KC+ C +  + +S L  HL+ HS
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 40.5 bits (96), Expect = 1e-04
 Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 22/78 (28%)

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           C  C+ A +   +   H  R H         S E           +P+ C+IC       
Sbjct: 39  CKTCDYAAADSSSLNKHL-RIH---------SDE-----------RPFKCQICPYASRNS 77

Query: 482 GSLLTHYDMHSGE-FYQC 498
             L  H   H+G+     
Sbjct: 78  SQLTVHLRSHTGDSGPSS 95

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.3 bits (153), Expect = 2e-10
 Identities = 54/373 (14%), Positives = 106/373 (28%), Gaps = 97/373 (26%)

Query: 104 QAMNP--TMLTTTR-------VGNISLKIPRCEECDINF-PSKMRHTFHLQHHLEDPDLP 153
            A N    +L TTR       +   +      +   +   P +++            DLP
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 154 VNFMHECRECG----SQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHM 209
                E         S  A+ ++  L T  ++ HV  ++L   I   E+  N L  + + 
Sbjct: 320 ----REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII---ESSLNVLEPAEYR 372

Query: 210 RYH-------ENVR--------------EYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
           +          +                + +  +   K    S +++        K    
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP------KESTI 426

Query: 249 EICGHYLSRASRLRAHLKAH-SVVASNNKVQNCKKCFKCCQVFPSNEEN-----LRKHFE 302
            I   YL    +L      H S+V   N      K F    + P   +      +  H +
Sbjct: 427 SIPSIYLELKVKLENEYALHRSIVDHYNI----PKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Query: 303 KVHFDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHKKLKHSNLTYGG 362
            +          F  V L   +RF                      L +K++H +  +  
Sbjct: 483 NIEHPERMTL--FRMVFLD--FRF----------------------LEQKIRHDSTAWNA 516

Query: 363 ESPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQH-VKSVT 421
              +        K    Y+  N       P+      ++L       L K +++ + S  
Sbjct: 517 SGSIL-NTLQQLKFYKPYICDND------PKYERLVNAILDF-----LPKIEENLICSKY 564

Query: 422 CSVCEKAFSSKEN 434
             +   A  +++ 
Sbjct: 565 TDLLRIALMAEDE 577

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 56.3 bits (136), Expect = 2e-10
 Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 3/70 (4%)

Query: 218 YECEICKKKFINKSTLKEHSVSH---MSVKPFKCEICGHYLSRASRLRAHLKAHSVVASN 274
            +CEIC      K++L  H   H   ++   F CE CG    +   + AH          
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 275 NKVQNCKKCF 284
              ++     
Sbjct: 68  APQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 4/56 (7%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF----YQCDVCFKEFRSSVTLRNHTRRH 518
               CEIC  T   + SL  H   H+       + C+ C K F    ++  H  + 
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 189 LKCTICNKENFKNQLSLSIHMRYH---ENVREYECEICKKKFINKSTLKEH-SVSHMSVK 244
           L+C IC     + + SL+ H R H        + CE C K+F    ++  H S SH ++ 
Sbjct: 8   LQCEICGF-TCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 245 PFKCEICG 252
               E  G
Sbjct: 67  LAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.0 bits (112), Expect = 4e-07
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 491 HSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN------FSCDECSVECQDLNALRMHTLRE 543
            SG    QC++C    R   +L  H R+H        F C+ C    +  +++  H  + 
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 544 HGYKILACEKC 554
           H   +LA ++ 
Sbjct: 62  HPALLLAPQES 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 43.2 bits (102), Expect = 8e-06
 Identities = 12/74 (16%), Positives = 18/74 (24%), Gaps = 18/74 (24%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTV 480
            C +C      K +   H  R+H                         + CE C K +  
Sbjct: 9   QCEICGFTCRQKASLNWH-QRKHAETV------AA-----------LRFPCEFCGKRFEK 50

Query: 481 EGSLLTHYDMHSGE 494
             S+  H       
Sbjct: 51  PDSVAAHRSKSHPA 64

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 5/62 (8%)

Query: 244 KPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEK 303
              +CEICG    + + L  H + H+   +      C+ C K         +++  H  K
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVA-ALRFPCEFCGKRF----EKPDSVAAHRSK 60

Query: 304 VH 305
            H
Sbjct: 61  SH 62

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 210 RYHENVREYECEICKKKFINKSTLKEH--SVSHMSVKPFKCEICGHYLSRASRLRAHLKA 267
              E    Y C++C + + + S    H  +    +VK + C  C    +R   + AH+K 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 268 H 268
            
Sbjct: 63  I 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 467 KPYTCEICSKTYTVEGSLLTHY--DMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
             Y C++CS+ YT   +   HY          Y C  CFKEF     +  H +  
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 19/73 (26%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTV 480
            C VC + ++   N   HY   H                       K Y C  C K +T 
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNV-------------------KVYPCPFCFKEFTR 52

Query: 481 EGSLLTHYDMHSG 493
           + ++  H  +   
Sbjct: 53  KDNMTAHVKIIHK 65

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 19/65 (29%), Positives = 30/65 (46%)

Query: 204 SLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRA 263
               H     + + Y+C+ C+  F  K  L  H   H   KP++C ICG   +R + L+ 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 264 HLKAH 268
           H + H
Sbjct: 64  HTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.5 bits (122), Expect = 2e-08
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRH 518
           KPY C+ C  ++  +G+L +H  +H+GE  Y+C++C  +F     L+ HTR H
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.9 bits (97), Expect = 4e-05
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 21/73 (28%)

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           C  C+ +F  K N  +H    H         +GE           KPY C IC   +   
Sbjct: 20  CDRCQASFRYKGNLASHK-TVH---------TGE-----------KPYRCNICGAQFNRP 58

Query: 482 GSLLTHYDMHSGE 494
            +L TH  +HSGE
Sbjct: 59  ANLKTHTRIHSGE 71

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.5 bits (96), Expect = 7e-05
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPF 246
           KC  C    F+ + +L+ H   H   + Y C IC  +F   + LK H+  H   KP+
Sbjct: 19  KCDRCQAS-FRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.8 bits (133), Expect = 8e-10
 Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 21/102 (20%)

Query: 417 VKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSK 476
           +K   C +C + FS  ++   H  R H         +GE           KP+ C+IC +
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHI-RTH---------TGE-----------KPFACDICGR 39

Query: 477 TYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRH 518
            +        H D+        D   +    +  L N   R 
Sbjct: 40  KFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARL 81

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 52.9 bits (128), Expect = 4e-09
 Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 27/104 (25%)

Query: 466 MKPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDNFSCD 524
           MKP+ C IC + ++    L TH   H+GE  + CD+C ++F  S   + H          
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH---------- 50

Query: 525 ECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHI 568
                        +             +K +   +    L   +
Sbjct: 51  -----------RDIQH--ILPIL---EDKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 19/108 (17%), Positives = 30/108 (27%), Gaps = 35/108 (32%)

Query: 158 HECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLS-LSIHMRYHENVR 216
            +CR C   F                                 ++   L+ H+R H   +
Sbjct: 4   FQCRICMRNF---------------------------------SRSDHLTTHIRTHTGEK 30

Query: 217 EYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAH 264
            + C+IC +KF      K H        P   +     LS+   L   
Sbjct: 31  PFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 215 VREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAH 268
           ++ ++C IC + F     L  H  +H   KPF C+ICG   +R+   + H    
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 54.9 bits (133), Expect = 8e-10
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 194 CNKENFKNQLSLSIHMRYHENVREYEC--EICKKKFINKSTLKEHSVSHMSVKPFKCEIC 251
           C K   K+   L  H+R H   + Y+C  E C  +F     L  H   H   KPF+C +C
Sbjct: 23  CTKVYTKSS-HLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81

Query: 252 GHYLSRASRLRAHLKAH 268
               SR+  L  H+K H
Sbjct: 82  NRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 53.0 bits (128), Expect = 4e-09
 Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 26/112 (23%)

Query: 414 KQHVKSVTCSV--CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTC 471
            +  +   C    C K ++   + KAH  R H         +GE           KPY C
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHL-RTH---------TGE-----------KPYKC 48

Query: 472 --EICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN 520
             E C   +     L  HY  H+G   +QC VC + F  S  L  H +RH N
Sbjct: 49  TWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 28/111 (25%), Positives = 39/111 (35%), Gaps = 30/111 (27%)

Query: 465 KMKPYTCEI--CSKTYTVEGSLLTHYDMHSGEF-YQC--DVCFKEFRSSVTLRNHTRRHD 519
           K + + C+   C+K YT    L  H   H+GE  Y+C  + C   F  S  L  H R+H 
Sbjct: 12  KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT 71

Query: 520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINT 570
                                    G K   C  C+  F+    LA H+  
Sbjct: 72  -------------------------GAKPFQCGVCNRSFSRSDHLALHMKR 97

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 54.0 bits (131), Expect = 2e-09
 Identities = 25/103 (24%), Positives = 34/103 (33%), Gaps = 24/103 (23%)

Query: 418 KSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKT 477
             V C +C K F    +   H    H         SGE           KPY+C +C   
Sbjct: 6   SGVACEICGKIFRDVYHLNRH-KLSH---------SGE-----------KPYSCPVCGLR 44

Query: 478 YTVEGSLLTHYDMHSGEF---YQCDVCFKEFRSSVTLRNHTRR 517
           +  +  +  H   H G     Y C  C K F     L  H ++
Sbjct: 45  FKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 52.5 bits (127), Expect = 5e-09
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKV 277
             CEIC K F +   L  H +SH   KP+ C +CG    R  R+  H+++H    S  K 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHD--GSVGKP 65

Query: 278 QNCKKCFKCCQVFPSNEENLRKHFEKVH 305
             C+ C K    F S  ++L  H ++VH
Sbjct: 66  YICQSCGKG---F-SRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 52.5 bits (127), Expect = 6e-09
 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 6/66 (9%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN----- 520
               CEIC K +     L  H   HSGE  Y C VC   F+    +  H R HD      
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65

Query: 521 FSCDEC 526
           + C  C
Sbjct: 66  YICQSC 71

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 45.9 bits (110), Expect = 1e-06
 Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 6/81 (7%)

Query: 158 HECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYH--ENV 215
             C  CG  F D   + L  H    H  +    C +C    FK +  +S H+R H     
Sbjct: 8   VACEICGKIFRD--VYHLNRHKL-SHSGEKPYSCPVCGL-RFKRKDRMSYHVRSHDGSVG 63

Query: 216 REYECEICKKKFINKSTLKEH 236
           + Y C+ C K F     L  H
Sbjct: 64  KPYICQSCGKGFSRPDHLNGH 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 53.3 bits (129), Expect = 3e-09
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYEC--EICKKKFINKSTLKEHSVSHMSVKPFK 247
               C K   K+   L  H+R H   + Y C  + C  KF     L  H   H   +PF+
Sbjct: 9   DYAGCGKTYTKSS-HLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67

Query: 248 CEICGHYLSRASRLRAHLKAH 268
           C+ C    SR+  L  H+K H
Sbjct: 68  CQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 24/101 (23%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTC--EICSKTY 478
             + C K ++   + KAH  R H         +GE           KPY C  + C   +
Sbjct: 9   DYAGCGKTYTKSSHLKAHL-RTH---------TGE-----------KPYHCDWDGCGWKF 47

Query: 479 TVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
                L  HY  H+G   +QC  C + F  S  L  H +RH
Sbjct: 48  ARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 6/68 (8%)

Query: 465 KMKPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDV--CFKEFRSSVTLRNHTRRHDN- 520
                    C KTYT    L  H   H+GE  Y CD   C  +F  S  L  H R+H   
Sbjct: 4   ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH 63

Query: 521 --FSCDEC 526
             F C +C
Sbjct: 64  RPFQCQKC 71

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 212 HENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC--EICGHYLSRASRLRAHLKAHS 269
                  +   C K +   S LK H  +H   KP+ C  + CG   +R+  L  H + H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH- 60

Query: 270 VVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHF 306
              + ++   C+KC +    F S  ++L  H  K HF
Sbjct: 61  ---TGHRPFQCQKCDRA---F-SRSDHLALH-MKRHF 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 190 KCT--ICNKENFKNQLSLSIHMRYHENVREYECEI--CKKKFINKSTLKEHSVSHMSVKP 245
            C    CNK  +     L +H R H   + Y+C+   C+++F     LK H   H  VKP
Sbjct: 8   MCAYPGCNKR-YFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 246 FKCEICGHYLSRASRLRAHLKAH 268
           F+C+ C    SR+  L+ H + H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 52.9 bits (128), Expect = 8e-09
 Identities = 39/115 (33%), Positives = 49/115 (42%), Gaps = 12/115 (10%)

Query: 467 KPYTCE--ICSKTYTVEGSLLTHYDMHSGEF-YQCDV--CFKEFRSSVTLRNHTRRHDN- 520
           +P+ C    C+K Y     L  H   H+GE  YQCD   C + F  S  L+ H RRH   
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 521 --FSCDECSVECQDLNALRMHTLREH-GYKILACEK--CDVKFTHKALLAEHINT 570
             F C  C  +    + L+ HT R H G K  +C    C  KF     L  H N 
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHT-RTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 24/97 (24%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEI--CSKTYTVEG 482
           C K +    + + H +R+H         +GE           KPY C+   C + ++   
Sbjct: 14  CNKRYFKLSHLQMH-SRKH---------TGE-----------KPYQCDFKDCERRFSRSD 52

Query: 483 SLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
            L  H   H+G   +QC  C ++F  S  L+ HTR H
Sbjct: 53  QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 49.4 bits (119), Expect = 1e-07
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 24/97 (24%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSL 484
           CE+ FS  +  K H  R+H         +G            KP+ C+ C + ++    L
Sbjct: 44  CERRFSRSDQLKRHQ-RRH---------TGV-----------KPFQCKTCQRKFSRSDHL 82

Query: 485 LTHYDMHSGEF-YQCDV--CFKEFRSSVTLRNHTRRH 518
            TH   H+GE  + C    C K+F  S  L  H   H
Sbjct: 83  KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 41/157 (26%), Positives = 55/157 (35%), Gaps = 22/157 (14%)

Query: 159 ECRE--CGSQFADILKHSLETHLSFIHVQDNQLKCT--ICNKENFKNQLSLSIHMRYH-- 212
            C+E  C   F     H L  H    H  +    C    C+   F  + ++  H      
Sbjct: 44  PCKEEGCEKGFTS--LHHLTRHSL-THTGEKNFTCDSDGCDLR-FTTKANMKKHFNRFHN 99

Query: 213 ENVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKC--EICGHYLSRASRLRAHLKAH 268
             +  Y C    C K F   + LK H  SH    P++C  E C    S  SRL+ H K H
Sbjct: 100 IKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

Query: 269 SVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVH 305
           +          CKK   C  V  +      KH  + H
Sbjct: 160 AG-------YPCKKDDSCSFVGKTW-TLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 44/219 (20%), Positives = 72/219 (32%), Gaps = 62/219 (28%)

Query: 190 KCTI--CNKENFKNQLSLSIHMRYHENVREYECE--ICKKKFINKSTLKEHSVSHMSVKP 245
            C+   C    +     L  H+  H   + + C+   C+K F +   L  HS++H   K 
Sbjct: 14  ICSFADCGA-AYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72

Query: 246 FKCE--ICGHYLSRASRLRAHLKAHSVVASNNKVQ-------NCKKCFKCCQVFPSNEEN 296
           F C+   C    +  + ++ H         N K+        NC K FK           
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFH----NIKICVYVCHFENCGKAFKKHN-------Q 121

Query: 297 LRKHFEKVH-----FDLEFDEAHFYDVVLKCVYRFRIVQYFLCELCDKTSIHYTYLCLHK 351
           L+ H +  H     +              +C +          E CDK     + L  H+
Sbjct: 122 LKVH-QFSHTQQLPY--------------ECPH----------EGCDKRFSLPSRLKRHE 156

Query: 352 KLKHSNLTYGGESP-VCEPCNLTFKNEWQYLVHNRAVHE 389
           K+ H+     G      + C+   K    YL H    H+
Sbjct: 157 KV-HA-----GYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 29/128 (22%), Positives = 41/128 (32%), Gaps = 27/128 (21%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEI--CSKTYTVEG 482
           C+  F++K N K H+ R H  K                      Y C    C K +    
Sbjct: 80  CDLRFTTKANMKKHFNRFHNIKI-------------------CVYVCHFENCGKAFKKHN 120

Query: 483 SLLTHYDMHSGE-FYQC--DVCFKEFRSSVTLRNHTRRH---DNFSCDECSVECQDLNAL 536
            L  H   H+ +  Y+C  + C K F     L+ H + H        D CS   +     
Sbjct: 121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 180

Query: 537 RMHTLREH 544
             H    H
Sbjct: 181 LKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.0 bits (110), Expect = 8e-06
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 26/99 (26%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCE--ICSKTYTVEG 482
           C  A++     +AH   +H         +GE           KP+ C+   C K +T   
Sbjct: 20  CGAAYNKNWKLQAHL-CKH---------TGE-----------KPFPCKEEGCEKGFTSLH 58

Query: 483 SLLTHYDMHSGE-FYQCD--VCFKEFRSSVTLRNHTRRH 518
            L  H   H+GE  + CD   C   F +   ++ H  R 
Sbjct: 59  HLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 33/165 (20%), Positives = 53/165 (32%), Gaps = 41/165 (24%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCE--ICSKTYTVEG 482
           CEK F+S  +   H    H         +GE           K +TC+   C   +T + 
Sbjct: 50  CEKGFTSLHHLTRHS-LTH---------TGE-----------KNFTCDSDGCDLRFTTKA 88

Query: 483 SLLTHYDMHSGE---FYQCDV--CFKEFRSSVTLRNHTRRH--------DNFSCDECSVE 529
           ++  H++         Y C    C K F+    L+ H   H         +  CD+    
Sbjct: 89  NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSL 148

Query: 530 CQDLNA-LRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHN 573
              L    ++H     GY     + C        L  +H+   H 
Sbjct: 149 PSRLKRHEKVHA----GYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 12/117 (10%)

Query: 158 HECRE--CGSQFADILKHSLETHLSFIH--VQDNQLKCTI--CNKENFKNQLSLSIHMRY 211
             C    C  +F    K +++ H +     ++     C    C K  FK    L +H   
Sbjct: 73  FTCDSDGCDLRFTT--KANMKKHFN-RFHNIKICVYVCHFENCGK-AFKKHNQLKVHQFS 128

Query: 212 HENVREYEC--EICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLK 266
           H     YEC  E C K+F   S LK H   H      K + C       +    H+ 
Sbjct: 129 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 185

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 14/65 (21%), Positives = 19/65 (29%), Gaps = 4/65 (6%)

Query: 208 HMRYHENVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKCE--ICGHYLSRASRLRA 263
                   + Y C    C   +     L+ H   H   KPF C+   C    +    L  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 264 HLKAH 268
           H   H
Sbjct: 63  HSLTH 67

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 33/115 (28%), Positives = 40/115 (34%), Gaps = 14/115 (12%)

Query: 467 KPYTCEI--CSKTYTVEGSLLTHYDMHSGE-FYQCD--VCFKEFRSSVTLRNHTRRH--- 518
           K Y C    C   Y     L  H   H+GE  + C    C K F S   L  H+  H   
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

Query: 519 DNFSCDE--CSVECQDLNALRMHTLREHGYKIL----ACEKCDVKFTHKALLAEH 567
            NF+CD   C +       ++ H  R H  KI       E C   F     L  H
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH 125

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 53.2 bits (129), Expect = 5e-09
 Identities = 18/66 (27%), Positives = 27/66 (40%)

Query: 204 SLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRA 263
             S      +  +E+ C+ C + F     L  H  +H   +P+ C+IC     R   LR 
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 264 HLKAHS 269
           H   HS
Sbjct: 64  HRYIHS 69

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 52.4 bits (127), Expect = 9e-09
 Identities = 29/98 (29%), Positives = 39/98 (39%), Gaps = 22/98 (22%)

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           C  C + F+   N   H  R H         + E           +PYTC+IC K +  +
Sbjct: 20  CKFCGRHFTKSYNLLIH-ERTH---------TDE-----------RPYTCDICHKAFRRQ 58

Query: 482 GSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
             L  H  +HS E  ++C  C K F  S TL  H   H
Sbjct: 59  DHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 50.5 bits (122), Expect = 4e-08
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHDN---FS 522
           K + C+ C + +T   +LL H   H+ E  Y CD+C K FR    LR+H   H     F 
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75

Query: 523 CDEC 526
           C EC
Sbjct: 76  CQEC 79

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 50.1 bits (121), Expect = 5e-08
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 158 HECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVRE 217
             C+ CG  F     ++L  H    H  +    C IC+K  F+ Q  L  H   H   + 
Sbjct: 18  FICKFCGRHFTK--SYNLLIHER-THTDERPYTCDICHK-AFRRQDHLRDHRYIHSKEKP 73

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
           ++C+ C K F    TL  H   HM       
Sbjct: 74  FKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 52.1 bits (126), Expect = 6e-09
 Identities = 22/65 (33%), Positives = 28/65 (43%)

Query: 205 LSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAH 264
            S     H   + Y C  C K F   S L +H   H   KP+KC  CG   S+ S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 265 LKAHS 269
            + H+
Sbjct: 62  QRIHT 66

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 45.9 bits (110), Expect = 7e-07
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
           KPY C  C K ++    L+ H  +H+GE  Y+C  C K F  +  L NH R H
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 38.2 bits (90), Expect = 4e-04
 Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)

Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPF 246
            C  C K  F     L  H R H   + Y+C  C K F   S L  H   H S    
Sbjct: 16  GCVECGKA-FSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 52.1 bits (126), Expect = 1e-08
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 159 ECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREY 218
            C +CG  F    K   + H+S +H+      C +C K  FK +  L  HM+ H  ++ Y
Sbjct: 12  PC-QCGKSFTH--KSQRDRHMS-MHLGLRPYGCGVCGK-KFKMKHHLVGHMKIHTGIKPY 66

Query: 219 ECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRA 263
           EC IC K+F+ + +   H       K ++        + AS   +
Sbjct: 67  ECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 49.7 bits (120), Expect = 8e-08
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 13/106 (12%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FS 522
           K Y C+ C K++T +     H  MH G   Y C VC K+F+    L  H + H     + 
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYE 67

Query: 523 CDECS---VECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLA 565
           C+ C+   +     +   + +      K     K +   T  +  +
Sbjct: 68  CNICAKRFMWRDSFH-RHVTS----CTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 47.8 bits (115), Expect = 4e-07
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 199 FKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRA 258
           F ++     HM  H  +R Y C +C KKF  K  L  H   H  +KP++C IC       
Sbjct: 19  FTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR 78

Query: 259 SRL--RAH 264
                   
Sbjct: 79  DSFHRHVT 86

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 45.1 bits (108), Expect = 4e-06
 Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 24/93 (25%)

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           C VC K F  K +   H  + H         +G            KPY C IC+K +   
Sbjct: 40  CGVCGKKFKMKHHLVGHM-KIH---------TGI-----------KPYECNICAKRFMWR 78

Query: 482 GSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRN 513
            S   H  + S    Y+     +    +    +
Sbjct: 79  DSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 44.7 bits (107), Expect = 4e-06
 Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 27/106 (25%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSL 484
           C K+F+ K     H    H          G            +PY C +C K + ++  L
Sbjct: 15  CGKSFTHKSQRDRHM-SMH---------LGL-----------RPYGCGVCGKKFKMKHHL 53

Query: 485 LTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRHDN---FSCDEC 526
           + H  +H+G   Y+C++C K F    +   H         +   + 
Sbjct: 54  VGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 44.7 bits (107), Expect = 5e-06
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS 269
           Y C+ C K F +KS    H   H+ ++P+ C +CG        L  H+K H+
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.5 bits (122), Expect = 2e-08
 Identities = 21/65 (32%), Positives = 30/65 (46%)

Query: 204 SLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRA 263
           S           R Y+C+ C K F + S L +H  +H   KP+KC+ CG    + S L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 264 HLKAH 268
           H + H
Sbjct: 65  HHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.3 bits (111), Expect = 7e-07
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
           + Y C+ C K+++    L  H   H+GE  Y+CD C K F     L  H R H
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.1 bits (95), Expect = 9e-05
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFK 247
           KC  C K +F +   LS H R H   + Y+C+ C K FI +S L  H   H    P  
Sbjct: 20  KCDECGK-SFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 49.8 bits (120), Expect = 4e-08
 Identities = 17/69 (24%), Positives = 22/69 (31%), Gaps = 4/69 (5%)

Query: 204 SLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSH----MSVKPFKCEICGHYLSRAS 259
           S     R H   + Y C  C K F  K  L  H   +         F C  CG   +R +
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 260 RLRAHLKAH 268
            +  H    
Sbjct: 62  TMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 49.8 bits (120), Expect = 4e-08
 Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 8/68 (11%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-----YQCDVCFKEFRSSVTLRNHTRRH--- 518
           KPY C  C KT+  +  L  H+  +         + C  C K F    T+  H       
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73

Query: 519 DNFSCDEC 526
           D    +  
Sbjct: 74  DGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 190 KCTICNKENFKNQLSLSIHMRYH--ENVRE--YECEICKKKFINKSTLKEHSVSHMSVKP 245
            C+ C+K  F+ +  L +H + +   N     + C  C K F  ++T+  H+ +      
Sbjct: 17  ACSHCDK-TFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 246 FKCEICG 252
            + E  G
Sbjct: 76  VEGENSG 82

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.8 bits (112), Expect = 6e-07
 Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 18/86 (20%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTV 480
            CS C+K F  K+    H+ R H                         + C  C KT+T 
Sbjct: 17  ACSHCDKTFRQKQLLDMHFKRYHDPNFVP-----------------AAFVCSKCGKTFTR 59

Query: 481 EGSLLTHYDMHSGEF-YQCDVCFKEF 505
             ++  H D  +G    + +      
Sbjct: 60  RNTMARHADNCAGPDGVEGENSGPSS 85

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAH 268
            +C  C     +K+ L+ H   H + +PFKC  C     + S L  H+K  
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.1 bits (113), Expect = 3e-07
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
            P  C  CS + + + +L  H  +H  +  ++C+ C  + +    L  H ++ 
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSH 240
           KC+ C+  +  ++ +L IH R H   R ++C  C       S L +H    
Sbjct: 11  KCSECSY-SCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 21/73 (28%)

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           CS C  + SSK   + H  R H           +           +P+ C  CS      
Sbjct: 12  CSECSYSCSSKAALRIHE-RIH---------CTD-----------RPFKCNYCSFDTKQP 50

Query: 482 GSLLTHYDMHSGE 494
            +L  H     G+
Sbjct: 51  SNLSKHMKKFHGD 63

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 190 KCTI--CNKENFKNQLSLSIHMRY-HENVREYECE--ICKKKFINKSTLKEHSVSHMSVK 244
            C    C +  F N+  L+ H +Y H + + + C    C K F  K  LKEH   H   +
Sbjct: 9   PCDFPGCGR-IFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 245 PFKCEICG 252
            + CE  G
Sbjct: 68  DYICEFSG 75

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 23/84 (27%)

Query: 425 CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCE--ICSKTYTVEG 482
           C + FS+++    H   QH           +           K ++C    C K++  + 
Sbjct: 15  CGRIFSNRQYLNHHKKYQH---------IHQ-----------KSFSCPEPACGKSFNFKK 54

Query: 483 SLLTHYDMHSGEF-YQCDVCFKEF 505
            L  H  +HS    Y C+      
Sbjct: 55  HLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 9/69 (13%)

Query: 467 KPYTCEI--CSKTYTVEGSLLTHY-DMHSGEF-YQCD--VCFKEFRSSVTLRNHTRRHDN 520
               C+   C + ++    L  H    H  +  + C    C K F     L+ H + H +
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 521 ---FSCDEC 526
              + C+  
Sbjct: 66  TRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 216 REYECEI--CKKKFINKSTLKEHS-VSHMSVKPFKCE--ICGHYLSRASRLRAHLKAHS 269
               C+   C + F N+  L  H    H+  K F C    CG   +    L+ H+K HS
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS 64

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 48.8 bits (117), Expect = 9e-08
 Identities = 23/81 (28%), Positives = 28/81 (34%), Gaps = 5/81 (6%)

Query: 190 KCTI--CNKENFKNQLSLSIHMRYHENVREYEC--EICKKKFINKSTLKEHSVSHMSVKP 245
            C    C K  FK    L +H   H     YEC  E C K+F   S LK H   H     
Sbjct: 3   VCHFENCGK-AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 246 FKCEICGHYLSRASRLRAHLK 266
            K + C       +    H+ 
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 12/92 (13%)

Query: 218 YECEI--CKKKFINKSTLKEHSVSHMSVKPFKC--EICGHYLSRASRLRAHLKAHSVVAS 273
           Y C    C K F   + LK H  SH    P++C  E C    S  SRL+ H K H+    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA---- 57

Query: 274 NNKVQNCKKCFKCCQVFPSNEENLRKHFEKVH 305
                 CKK   C  V         KH  + H
Sbjct: 58  ---GYPCKKDDSCSFVG-KTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 20/100 (20%), Positives = 30/100 (30%), Gaps = 24/100 (24%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTC--EICSKTY 478
               C KAF      K H    H         + +            PY C  E C K +
Sbjct: 5   HFENCGKAFKKHNQLKVH-QFSH---------TQQ-----------LPYECPHEGCDKRF 43

Query: 479 TVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRR 517
           ++   L  H  +H+G    + D C    ++      H   
Sbjct: 44  SLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 83

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 205 LSIHMRYHENVREYEC--EICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLR 262
           L  ++      R Y C  E C ++F     L  H   H   KPF+C IC    SR+  L 
Sbjct: 9   LLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66

Query: 263 AHLKAHS 269
            H++ H+
Sbjct: 67  THIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 467 KPYTC--EICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
           +PY C  E C + ++    L  H  +H+G+  +QC +C + F  S  L  H R H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.8 bits (113), Expect = 5e-07
 Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 6/93 (6%)

Query: 182 IHVQDNQLKCTICNKENFKNQLSLSIHMRY-----HENVREYECEICKKKFINKSTLKEH 236
           I    ++ +C  C+   +   + L++HM        +N         +     K +L E 
Sbjct: 13  IFTGASKFRCKDCSAA-YDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEM 71

Query: 237 SVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS 269
                + K  KC  CGH       L  H+    
Sbjct: 72  EGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.8 bits (100), Expect = 3e-05
 Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 10/107 (9%)

Query: 483 SLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTR-----RHDNFSCDECSV---ECQDL 533
           S   +  + +G   ++C  C   + + V L  H       R DN   D  +         
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 534 NALRMHTLREHGYKILACEKCDVKFTHKALLAEH-INTKHNTDVTLK 579
            +L     +E   K+L C  C   F     L+ H I TKH   V+  
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.9 bits (108), Expect = 5e-07
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS 269
           Y CE C  +    S LK+H  +H  V+P+ C  C         L  H+K+ +
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.7 bits (92), Expect = 8e-05
 Identities = 13/51 (25%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 469 YTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRRH 518
           Y CE C         L  H   H+    Y C  C   F++   L  H +  
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 47.9 bits (115), Expect = 5e-07
 Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 9/114 (7%)

Query: 159 ECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREY 218
             + C   F D    ++  HL   H       C  C K  F     L  H   H   + +
Sbjct: 9   PHKGCTKMFRD--NSAMRKHLH-TH-GPRVHVCAECGK-AFVESSKLKRHQLVHTGEKPF 63

Query: 219 ECEI--CKKKFINKSTLKEHSVSHMSVKPFKCEI--CGHYLSRASRLRAHLKAH 268
           +C    C K+F     L+ H   H   +P+ C    C    ++++ L++H+  H
Sbjct: 64  QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 46.7 bits (112), Expect = 1e-06
 Identities = 25/106 (23%), Positives = 35/106 (33%), Gaps = 27/106 (25%)

Query: 418 KSVTCSV--CEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICS 475
           +++ C    C K F      + H    HG +                      + C  C 
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHL-HTHGPR---------------------VHVCAECG 41

Query: 476 KTYTVEGSLLTHYDMHSGEF-YQCDV--CFKEFRSSVTLRNHTRRH 518
           K +     L  H  +H+GE  +QC    C K F     LR H R H
Sbjct: 42  KAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 26/103 (25%)

Query: 421 TCSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEI--CSKTY 478
            C+ C KAF      K H    H         +GE           KP+ C    C K +
Sbjct: 36  VCAECGKAFVESSKLKRH-QLVH---------TGE-----------KPFQCTFEGCGKRF 74

Query: 479 TVEGSLLTHYDMHSGEF-YQCDV--CFKEFRSSVTLRNHTRRH 518
           +++ +L TH  +H+G+  Y C    C K+F  S  L++H   H
Sbjct: 75  SLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 23/130 (17%)

Query: 126 CEECDINFPSKMRHTFHLQHHL----EDPDLPVNFMHECRECGSQFADILKHSLETHLSF 181
            + C   F    R    ++ HL              H C ECG  F +     L+ H   
Sbjct: 10  HKGCTKMF----RDNSAMRKHLHTHGPRV-------HVCAECGKAFVE--SSKLKRHQL- 55

Query: 182 IHVQDNQLKCTI--CNKENFKNQLSLSIHMRYHENVREYECEI--CKKKFINKSTLKEHS 237
           +H  +   +CT   C K  F    +L  H+R H   R Y C    C KKF   + LK H 
Sbjct: 56  VHTGEKPFQCTFEGCGK-RFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114

Query: 238 VSHMSVKPFK 247
           ++H   K  +
Sbjct: 115 LTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 39.4 bits (93), Expect = 5e-04
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 218 YECEI--CKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAH 268
             C    C K F + S +++H  +H   +   C  CG     +S+L+ H   H
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLK 266
           + CE+C + F  +  LK H  SH + KP+ C +C    +R   L  H +
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEF-YQCDVCFKEFRSSVTLRNHTRR 517
           + + CE+C++ +  +  L  HY  H+ E  Y C +C + F     L  H ++
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHS 237
            C +C +  F  Q  L  H R H N + Y C +C + F  +  L  H+
Sbjct: 4   VCEVCTR-AFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 22/77 (28%)

Query: 422 CSVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVE 481
           C VC +AF+ +E+ K HY R H         + E           KPY C +C++ +T  
Sbjct: 5   CEVCTRAFARQEHLKRHY-RSH---------TNE-----------KPYPCGLCNRAFTRR 43

Query: 482 GSLLTHYD-MHSGEFYQ 497
             L+ H   +HSG   +
Sbjct: 44  DLLIRHAQKIHSGNLGE 60

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 45.7 bits (107), Expect = 2e-06
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 2/86 (2%)

Query: 491 HSGEFYQCDVCFKEFRSSVTLRNHTRRHDN-FSCDECSVECQDLNALRMHTLREHGYKIL 549
            + E YQC +C  +  S +   +H R   N   C  CS+        + H   +  YK L
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHE-SKCEYKKL 70

Query: 550 ACEKCDVKFTHKALLAEHINTKHNTD 575
            C +C   F     +  H    HN +
Sbjct: 71  TCLECMRTFKSSFSIWRHQVEVHNQN 96

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.9 bits (105), Expect = 5e-06
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 4/75 (5%)

Query: 190 KCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
           +C +CN +   + L    H R   N     C  C  +F +    +EH  S    K   C 
Sbjct: 18  QCRLCNAK-LSSLLEQGSHERLCRN--AAVCPYCSLRFFSPELKQEHE-SKCEYKKLTCL 73

Query: 250 ICGHYLSRASRLRAH 264
            C      +  +  H
Sbjct: 74  ECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 38.3 bits (88), Expect = 8e-04
 Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 3/86 (3%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHD--NFSCD 524
           + Y C +C+   +      +H  +       C  C   F S    + H  + +    +C 
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCL 73

Query: 525 ECSVECQDLNALRMHTLREHGYKILA 550
           EC    +   ++  H +  H    +A
Sbjct: 74  ECMRTFKSSFSIWRHQVEVHNQNNMA 99

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.5 bits (102), Expect = 5e-06
 Identities = 16/66 (24%), Positives = 21/66 (31%), Gaps = 7/66 (10%)

Query: 204 SLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRA 263
           S     + H   R  +C  C   FI +STL          K   CE C     + + L  
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57

Query: 264 HLKAHS 269
                S
Sbjct: 58  DEGNES 63

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 204 SLSIHMRYHENVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKC--EICGHYLSRAS 259
             S        +R + C    C K +   S LK H+ +H   KPF C  + C    +R+ 
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 260 RLRAHLKAH 268
            L  H + H
Sbjct: 64  ELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 465 KMKPYTCEI--CSKTYTVEGSLLTHYDMHSGEF-YQCDV--CFKEFRSSVTLRNHTRRH 518
           +++ + C    C KTY     L  H   H+GE  + C    C + F  S  L  H R H
Sbjct: 14  RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                   + ++C+IC K F  +S L  HS+ H + KP    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                    + YEC++C+K F + ++L +H   H   KP    
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 218 YECEICKKKFINKSTLKEHSVS-HMSVKPFKCEICG 252
           Y C+ C K F     L  H    H S +P KC++  
Sbjct: 13  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWV 48

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 467 KPYTCEICSKTYTVEGSLLTHY-DMHSGEF-YQCDVCFKEFRS 507
           KPY C+ C K ++    L  H   +H+ E  ++C V      S
Sbjct: 11  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                   + Y CE C K FI+ S L+EH   H   KP    
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                   + Y+CE C K FI +  L  H + H   KP    
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                   + Y+C  C K F  KS L+ H   H   +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                  V+ Y C  C K F   S+L  H V H   KP    
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 40.3 bits (93), Expect = 3e-04
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 7/124 (5%)

Query: 423 SVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEG 482
           S  +K  S+ +    H T        +  +  +  P  ++L++    T     +      
Sbjct: 8   SGSKKYLSNHKGIFIHVTL------EELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESS 61

Query: 483 SLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHDN-FSCDECSVECQDLNALRMHTL 541
            L       +   + C +C   F SSV+L+ H R  ++   C  C  E    ++   H  
Sbjct: 62  YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVC 121

Query: 542 REHG 545
           ++H 
Sbjct: 122 KKHN 125

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 8e-04
 Identities = 21/121 (17%), Positives = 48/121 (39%), Gaps = 18/121 (14%)

Query: 193 ICNKENFKNQLSLSIHMRYHENVREYE--------CEICKKKFINKSTLKEHSVSHMSVK 244
           + N +     ++L    RYH+   E +          I   + +++S+     ++  ++ 
Sbjct: 14  LSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAIS 73

Query: 245 PFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKV 304
            F C +C    S +  L+ H++           ++ K C  C + F ++ ++   H  K 
Sbjct: 74  QFVCPLCLMPFSSSVSLKQHIRYT---------EHTKVCPVCKKEF-TSTDSALDHVCKK 123

Query: 305 H 305
           H
Sbjct: 124 H 124

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                    + Y+C++C K+F   S L+ H   H   KP   
Sbjct: 2   SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                    + Y+CE C K + +K  L  H   H   +P   
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 216 REYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC 251
           ++  CEIC K F +   L  H +SH   KP+     
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 10/42 (23%), Positives = 12/42 (28%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                    + +EC  C K F  K  L  H   H   K    
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 14/42 (33%), Positives = 15/42 (35%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                    + YEC IC K F  KS L  H   H   KP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 11/42 (26%), Positives = 14/42 (33%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                    + YEC  C+K F  KS L  H  +H        
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 16/41 (39%), Positives = 16/41 (39%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                   R YEC  C K FI KSTL  H   H   KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                   + Y+CE C K +  +  L  H   HM  K    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 18/91 (19%), Positives = 24/91 (26%), Gaps = 23/91 (25%)

Query: 158 HECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVRE 217
              + C   F+    H L TH++  HV   +    +C  E                    
Sbjct: 26  RPKKSCDRTFST--MHELVTHVTMEHVGGPEQNNHVCYWEE------------------- 64

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
             C    K F  K  L  H   H   K    
Sbjct: 65  --CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                    + YEC +C K F ++ +L  H   H   KP    
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 1/45 (2%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICG 252
                   + ++CE C K F   S    H  SH   KP      G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 9/42 (21%), Positives = 15/42 (35%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                   + Y+C  C K F + S+  +H   H   +P    
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 15/41 (36%), Positives = 15/41 (36%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                   R YEC  C K F  KSTL  H   H   KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 13/41 (31%), Positives = 14/41 (34%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                   + YEC  C K FI KS L  H   H    P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 11/43 (25%), Positives = 13/43 (30%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                    + Y+C  C K F   S L  H   H   KP    
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 13/44 (29%), Positives = 15/44 (34%)

Query: 206 SIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                     + +EC  C K F  KSTL  H   H   KP    
Sbjct: 1   GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 12/41 (29%), Positives = 14/41 (34%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                  V  Y+C  C+K F  K  L  H   H   KP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                   + YEC  C K F  +S+L  H   H   KP    
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 12/43 (27%), Positives = 14/43 (32%)

Query: 207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                    + Y C  C K F  KS L  H  +H   KP    
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                   + ++C  C K F  +S L  H   H   KP   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.5 bits (85), Expect = 7e-04
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGE 494
            PY C  C K++T  GSL  H    S  
Sbjct: 10  TPYLCGQCGKSFTQRGSLAVHQRSCSQS 37

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                E  + Y+C  C K F     L +H ++H   KP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 13/41 (31%), Positives = 15/41 (36%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                   + YEC  C K FI KS L  H  +H  V     
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                   + ++C  CKK F   S+L  H   H   KP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 12/42 (28%), Positives = 14/42 (33%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                   + Y+C  C K F   S L  H V H   KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGE 494
           KPY CEIC   +    +L +H  +H+G 
Sbjct: 10  KPYPCEICGTRFRHLQTLKSHLRIHTGS 37

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.2 bits (84), Expect = 8e-04
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 236 HSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVV 271
            +     +KPF+C  C    SR+  L  H K H +V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 36.3 bits (85), Expect = 9e-04
 Identities = 11/42 (26%), Positives = 13/42 (30%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                   + +EC  C K F   S L  H   H   KP    
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 9e-04
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                   + ++CE C K+F   S L  H   H   KP   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 36.4 bits (85), Expect = 9e-04
 Identities = 15/41 (36%), Positives = 16/41 (39%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC 248
                  V+ Y C  C K F  KS L  H  SH  VKP   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 9e-04
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                   + YEC++C K F  K+ L +H  +H   KP    
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 9e-04
 Identities = 11/42 (26%), Positives = 13/42 (30%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE 249
                   + Y+C  C K F   S L  H   H   KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	597
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.84
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.74
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.73
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.72
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.72
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.71
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.71
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.71
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.67
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.67
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.65
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.64
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.64
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.64
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.63
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.62
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.61
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.6
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.53
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.51
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.49
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.49
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.48
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.48
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.47
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.47
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.45
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.45
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.45
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.44
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.44
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.41
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.41
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.4
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.4
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.4
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.39
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.39
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.38
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.36
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.36
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.36
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.34
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.31
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.3
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.28
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.26
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.25
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.24
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.23
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.22
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.22
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.21
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.17
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.17
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.16
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.16
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.16
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.16
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.15
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.14
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.14
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.13
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.07
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.06
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.03
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.02
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.02
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.01
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.01
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.0
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.0
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.98
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.98
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.97
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.96
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.95
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.93
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.92
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.91
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.89
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.89
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.88
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.88
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.88
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.7
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.7
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.69
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.68
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.67
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.67
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.63
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.6
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.56
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.56
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.52
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.52
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.48
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.4
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.4
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.38
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.38
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.34
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.31
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.3
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.28
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.24
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.16
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.14
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.11
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.09
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.08
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.07
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.07
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.07
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.06
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.06
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.04
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.3
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.03
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.03
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.03
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.28
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.02
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.01
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.01
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.0
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.99
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.98
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.98
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.96
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.96
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.96
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.96
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.95
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.93
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.91
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.91
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.12
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.12
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.89
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.88
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.09
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.07
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.7
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.56
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.49
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.63
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.23
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.81
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.76
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.39
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.8
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.66
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.4
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.4
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	92.91
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	90.79
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	82.4
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	81.65
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	80.27

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.8e-34  Score=261.48  Aligned_cols=179  Identities=30%  Similarity=0.574  Sum_probs=136.7

Q ss_pred             hhhHhHhhhcccCCCCCCC-CCCCCcCccCCCCHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCcccccCccCceecc
Q psy12199        345 TYLCLHKKLKHSNLTYGGE-SPVCEPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCS  423 (597)
Q Consensus       345 ~~L~~H~~~~h~~~~~~~~-~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~  423 (597)
                      ..|..|+.      .+.++ ++.|+.|++.|.+...|..|++ .|.       +                   +++|.|+
T Consensus         7 ~~l~~h~~------~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~-------~-------------------~~~~~C~   53 (190)
T 2i13_A            7 SSSVAQAA------LEPGEKPYACPECGKSFSRSDHLAEHQR-THT-------G-------------------EKPYKCP   53 (190)
T ss_dssp             ------------------------------CCSSHHHHHGGG-CC-----------------------------CCEECT
T ss_pred             ccchhhhh------hcCCCCCCcCCCCccccCCHHHHHHHHH-HcC-------C-------------------CCCccCC
Confidence            45666665      33333 3488889988888888888887 443       1                   2679999


Q ss_pred             cCccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhcCCCceecccccccccchhhHHHHHHhccCc-cccCCcCh
Q psy12199        424 VCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCF  502 (597)
Q Consensus       424 ~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~  502 (597)
                      .|++.|.+...|..|++.+++.                     ++|.|++|++.|.+...|..|+++|+++ +|.|+.|+
T Consensus        54 ~C~~~f~~~~~l~~H~~~h~~~---------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  112 (190)
T 2i13_A           54 ECGKSFSDKKDLTRHQRTHTGE---------------------KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECG  112 (190)
T ss_dssp             TTCCEESSHHHHHHHHHHHHCC---------------------CCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTC
T ss_pred             CcCchhCCHHHHHHHHHhcCCC---------------------CCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCC
Confidence            9999999999999999966654                     7899999999999999999999999988 99999999


Q ss_pred             hccCCcHHHHHHhhhcC---CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCccc
Q psy12199        503 KEFRSSVTLRNHTRRHD---NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTL  578 (597)
Q Consensus       503 ~~F~~~~~L~~H~~~H~---~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~  578 (597)
                      +.|.+...|..|+++|+   +|.|++|++.|.+...|..|+++|++++||.|++|++.|.++..|..|+++ |++++||
T Consensus       113 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~k~~  190 (190)
T 2i13_A          113 KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT-HTGKKTS  190 (190)
T ss_dssp             CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTT-C------
T ss_pred             CccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHh-cCCCCCC
Confidence            99999999999999986   799999999999999999999999999999999999999999999999998 8898886

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=7.2e-34  Score=258.70  Aligned_cols=180  Identities=28%  Similarity=0.538  Sum_probs=146.4

Q ss_pred             CcccccccCCCCCCCCCCCccCccCCCchhhHhhhhhccCCCCCCCCCccccChhhhhHHHHHHHHHHhhhhhcccCCCc
Q psy12199        109 TMLTTTRVGNISLKIPRCEECDINFPSKMRHTFHLQHHLEDPDLPVNFMHECRECGSQFADILKHSLETHLSFIHVQDNQ  188 (597)
Q Consensus       109 ~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C~~C~~~f~~~~~~~l~~H~~~~h~~~~~  188 (597)
                      ..|..|...+.++++|.|++|++.|.+...|..|++.|.++++      |.|++|++.|.  ....|..|++ .|.++++
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------~~C~~C~~~f~--~~~~l~~H~~-~h~~~~~   77 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKP------YKCPECGKSFS--DKKDLTRHQR-THTGEKP   77 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CC------EECTTTCCEES--SHHHHHHHHH-HHHCCCC
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCC------ccCCCcCchhC--CHHHHHHHHH-hcCCCCC
Confidence            4566778888999999999999999999999999999999887      99999999999  7899999998 8999999


Q ss_pred             cccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhh
Q psy12199        189 LKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAH  268 (597)
Q Consensus       189 ~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H  268 (597)
                      |.|.+|++ .|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+.+.|..|+++|
T Consensus        78 ~~C~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  156 (190)
T 2i13_A           78 YKCPECGK-SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH  156 (190)
T ss_dssp             EECTTTCC-EESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccCcccCC-ccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            99999999 79999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCcccCCccccccccCCCCchHHHHhhhhhccC
Q psy12199        269 SVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHF  306 (597)
Q Consensus       269 ~~~~~~~~~~~C~~C~~c~~~f~~~~~~l~~H~~~~~~  306 (597)
                      +    ++++|.|..|   ++.|.. ...|..|++.|++
T Consensus       157 ~----~~~~~~C~~C---~~~f~~-~~~L~~H~~~H~~  186 (190)
T 2i13_A          157 T----GEKPYKCPEC---GKSFSR-RDALNVHQRTHTG  186 (190)
T ss_dssp             H----CCCCEECTTT---CCEESS-HHHHHHHHTTC--
T ss_pred             C----CCCCeECCCC---CCccCC-HHHHHHHHHhcCC
Confidence            8    8999999988   999998 9999999999876

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=2e-29  Score=229.28  Aligned_cols=171  Identities=28%  Similarity=0.525  Sum_probs=156.0

Q ss_pred             CCCCCCCCC--CccCccCCCchhhHhhhhhccCCCCCCCCCcccc--ChhhhhHHHHHHHHHHhhhhhcccCCCccccC-
Q psy12199        118 NISLKIPRC--EECDINFPSKMRHTFHLQHHLEDPDLPVNFMHEC--RECGSQFADILKHSLETHLSFIHVQDNQLKCT-  192 (597)
Q Consensus       118 ~~~~k~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~C--~~C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~-  192 (597)
                      ....++|.|  +.|++.|.+...|..|++.|.++++      |.|  +.|++.|.  ....|..|++ +|.++++|.|. 
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~------~~C~~~~C~~~f~--~~~~l~~H~~-~h~~~~~~~C~~   77 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKP------FPCKEEGCEKGFT--SLHHLTRHSL-THTGEKNFTCDS   77 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCS------SCCSSTTCCCCCS--SHHHHHHHHT-TTTTCCCEECCS
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCC------ccCCCCCCChhhC--CHHHHHHHHH-HccCCCceeCCC
Confidence            345688999  6899999999999999999999888      999  88999999  7899999998 99999999999 


Q ss_pred             -CCCccCCCChhhHHHHh-hcc-CCCccccc--ccccccccCchhhhhhhccccccCccccCc--cchhhhchHHHHHHH
Q psy12199        193 -ICNKENFKNQLSLSIHM-RYH-ENVREYEC--EICKKKFINKSTLKEHSVSHMSVKPFKCEI--CGHYLSRASRLRAHL  265 (597)
Q Consensus       193 -~C~k~~f~~~~~L~~H~-~~H-~~~k~~~C--~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~  265 (597)
                       .|++ .|.+...|..|+ +.| .++++|.|  ++|++.|.+...|..|+++|++++||.|++  |++.|.+.+.|..|+
T Consensus        78 ~~C~~-~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~  156 (190)
T 1tf6_A           78 DGCDL-RFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE  156 (190)
T ss_dssp             SSCCC-EESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHH
T ss_pred             CCCCC-ccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHH
Confidence             8999 799999999999 677 57899999  899999999999999999999999999988  999999999999999


Q ss_pred             HhhcccccCCcccCCccccccccCCCCchHHHHhhhhhccC
Q psy12199        266 KAHSVVASNNKVQNCKKCFKCCQVFPSNEENLRKHFEKVHF  306 (597)
Q Consensus       266 ~~H~~~~~~~~~~~C~~C~~c~~~f~~~~~~l~~H~~~~~~  306 (597)
                      ++|+    +   |.|..|..|++.|.. ...|..|++.+++
T Consensus       157 ~~H~----~---~~C~~~~~C~~~f~~-~~~l~~H~~~h~~  189 (190)
T 1tf6_A          157 KVHA----G---YPCKKDDSCSFVGKT-WTLYLKHVAECHQ  189 (190)
T ss_dssp             TSSC----S---CCCCSTTTCCCCCSC-HHHHHHHHTTCC-
T ss_pred             HHhC----C---CcCCCCCcCCCcccc-HHHHHHHHHhhcC
Confidence            9997    4   888885556999998 9999999998874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=9.6e-30  Score=231.39  Aligned_cols=156  Identities=26%  Similarity=0.543  Sum_probs=145.1

Q ss_pred             cCceec--ccCccccCChhhHHhHhhhccCCCCCCCCCCCCCcchhhhhcCCCceec--ccccccccchhhHHHHHHhcc
Q psy12199        417 VKSVTC--SVCEKAFSSKENCKAHYTRQHGNKEPKEPKSGEGLPALEQLLKMKPYTC--EICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       417 ~~~~~C--~~C~~~f~~~~~L~~H~~~~h~~~~~~~~~~~~~~~~~~~~~~~k~~~C--~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      .++|.|  +.|++.|.+...|..|++.+++.                     ++|.|  ++|++.|.+...|..|+++|+
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~---------------------~~~~C~~~~C~~~f~~~~~l~~H~~~h~   68 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGE---------------------KPFPCKEEGCEKGFTSLHHLTRHSLTHT   68 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCC---------------------CSSCCSSTTCCCCCSSHHHHHHHHTTTT
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCC---------------------CCccCCCCCCChhhCCHHHHHHHHHHcc
Confidence            478999  68999999999999999965543                     78999  889999999999999999999


Q ss_pred             Cc-cccCC--cChhccCCcHHHHHHh-hhcC----CCCC--CcCccccCChHHHHHHHHHhhccceeecCc--CccccCC
Q psy12199        493 GE-FYQCD--VCFKEFRSSVTLRNHT-RRHD----NFSC--DECSVECQDLNALRMHTLREHGYKILACEK--CDVKFTH  560 (597)
Q Consensus       493 ~e-~y~C~--~C~~~F~~~~~L~~H~-~~H~----~~~C--~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~--C~~~F~~  560 (597)
                      ++ +|.|+  .|++.|.+...|..|+ +.|.    +|.|  +.|++.|.+...|..|+++|++++||.|++  |++.|.+
T Consensus        69 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~  148 (190)
T 1tf6_A           69 GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSL  148 (190)
T ss_dssp             TCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSS
T ss_pred             CCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcC
Confidence            98 99999  8999999999999999 6673    6999  899999999999999999999999999988  9999999


Q ss_pred             hhHHHhhhcccCCCCcccccCC---CCcceeeceEEEecC
Q psy12199        561 KALLAEHINTKHNTDVTLKCQL---CNVVVLIEEVIFWIS  597 (597)
Q Consensus       561 ~~~L~~H~~~~H~~~~~~~C~~---C~~~f~~~~~l~~H~  597 (597)
                      ...|.+|+++ |++   |.|..   ||+.|.....|..|+
T Consensus       149 ~~~L~~H~~~-H~~---~~C~~~~~C~~~f~~~~~l~~H~  184 (190)
T 1tf6_A          149 PSRLKRHEKV-HAG---YPCKKDDSCSFVGKTWTLYLKHV  184 (190)
T ss_dssp             HHHHHHHHTS-SCS---CCCCSTTTCCCCCSCHHHHHHHH
T ss_pred             HHHHHHHHHH-hCC---CcCCCCCcCCCccccHHHHHHHH
Confidence            9999999998 776   99999   999999999988874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=1.3e-25  Score=196.84  Aligned_cols=135  Identities=24%  Similarity=0.521  Sum_probs=115.9

Q ss_pred             CceecccCccccCChhhHHhHhhhc--cCCCCCCCCCCCCCcchhhhhcCCCceeccc-----ccccccchhhHHHHHHh
Q psy12199        418 KSVTCSVCEKAFSSKENCKAHYTRQ--HGNKEPKEPKSGEGLPALEQLLKMKPYTCEI-----CSKTYTVEGSLLTHYDM  490 (597)
Q Consensus       418 ~~~~C~~C~~~f~~~~~L~~H~~~~--h~~~~~~~~~~~~~~~~~~~~~~~k~~~C~~-----C~~~f~~~~~L~~H~~~  490 (597)
                      .+|.|+.|++.|.+...|..|++..  |.++                    ++|.|++     |++.|.+...|..|+++
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~--------------------~~~~C~~c~C~~c~~~f~~~~~l~~H~~~   61 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGER--------------------KEFVCHWGGCSRELRPFKAQYMLVVHMRR   61 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCS--------------------SCCCCCBTTCTTTTCCCSSHHHHHHHTHH
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCC--------------------cceeCCCCCccchhhhhhhHHHHHHHHHh
Confidence            4688999999999999999998853  3333                    6777764     35899999999999999


Q ss_pred             ccCc-cccCCc--ChhccCCcHHHHHHhhhcC---CCCCCc--CccccCChHHHHHHH-HHhhccceeecCc--CccccC
Q psy12199        491 HSGE-FYQCDV--CFKEFRSSVTLRNHTRRHD---NFSCDE--CSVECQDLNALRMHT-LREHGYKILACEK--CDVKFT  559 (597)
Q Consensus       491 H~~e-~y~C~~--C~~~F~~~~~L~~H~~~H~---~~~C~~--C~~~f~~~~~L~~H~-~~h~~~k~~~C~~--C~~~F~  559 (597)
                      |+++ ||.|++  |++.|.+...|..|+++|+   +|.|++  |++.|.+...|..|+ ++|.+++||.|++  |++.|.
T Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~  141 (155)
T 2gli_A           62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYT  141 (155)
T ss_dssp             HHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEES
T ss_pred             cCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccC
Confidence            9887 899985  9999999999999999987   699998  999999999999998 7899999999988  999999


Q ss_pred             ChhHHHhhhcccC
Q psy12199        560 HKALLAEHINTKH  572 (597)
Q Consensus       560 ~~~~L~~H~~~~H  572 (597)
                      +...|..|++++|
T Consensus       142 ~~~~L~~H~~~hh  154 (155)
T 2gli_A          142 DPSSLRKHVKTVH  154 (155)
T ss_dssp             SHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHhhc
Confidence            9999999998854

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.2e-25  Score=195.43  Aligned_cols=138  Identities=29%  Similarity=0.526  Sum_probs=127.1

Q ss_pred             CCCCCCccCccCCCchhhHhhhh---hccCCCCCCCCCccccCh-----hhhhHHHHHHHHHHhhhhhcccCCCccccCC
Q psy12199        122 KIPRCEECDINFPSKMRHTFHLQ---HHLEDPDLPVNFMHECRE-----CGSQFADILKHSLETHLSFIHVQDNQLKCTI  193 (597)
Q Consensus       122 k~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~~~~~~~C~~-----C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~~  193 (597)
                      -+|.|+.|++.|.+...|..|++   .|.++++      |.|++     |++.|.  ....|..|++ .|.++++|.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~------~~C~~c~C~~c~~~f~--~~~~l~~H~~-~h~~~~~~~C~~   72 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKE------FVCHWGGCSRELRPFK--AQYMLVVHMR-RHTGEKPHKCTF   72 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSC------CCCCBTTCTTTTCCCS--SHHHHHHHTH-HHHCCCCCCCCS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcc------eeCCCCCccchhhhhh--hHHHHHHHHH-hcCCCCCccCCC
Confidence            47999999999999999999998   6777776      87764     458898  6899999998 899999999986


Q ss_pred             --CCccCCCChhhHHHHhhccCCCccccccc--ccccccCchhhhhhh-ccccccCccccCc--cchhhhchHHHHHHHH
Q psy12199        194 --CNKENFKNQLSLSIHMRYHENVREYECEI--CKKKFINKSTLKEHS-VSHMSVKPFKCEI--CGHYLSRASRLRAHLK  266 (597)
Q Consensus       194 --C~k~~f~~~~~L~~H~~~H~~~k~~~C~~--C~~~F~~~~~L~~H~-~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~  266 (597)
                        |++ .|.+...|..|+++|+++++|.|++  |++.|.+...|..|+ ++|.+++||.|++  |++.|.+.+.|..|++
T Consensus        73 ~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~  151 (155)
T 2gli_A           73 EGCRK-SYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK  151 (155)
T ss_dssp             TTCCC-CCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCC-cccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHH
Confidence              999 7999999999999999999999998  999999999999998 8999999999998  9999999999999999


Q ss_pred             hhc
Q psy12199        267 AHS  269 (597)
Q Consensus       267 ~H~  269 (597)
                      +|+
T Consensus       152 ~hh  154 (155)
T 2gli_A          152 TVH  154 (155)
T ss_dssp             HSC
T ss_pred             hhc
Confidence            986

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=3.3e-24  Score=180.19  Aligned_cols=112  Identities=25%  Similarity=0.463  Sum_probs=106.0

Q ss_pred             CCCceecccccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhc---C---CCCCCcCccccCChHHHH
Q psy12199        465 KMKPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRH---D---NFSCDECSVECQDLNALR  537 (597)
Q Consensus       465 ~~k~~~C~~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H---~---~~~C~~C~~~f~~~~~L~  537 (597)
                      ++++|.|++|++.|.+...|..|+++|+++ +|.|+.|++.|.+...|..|++.|   .   +|.|++|++.|.+...|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            347899999999999999999999999998 999999999999999999999964   2   799999999999999999


Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCc
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDV  576 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~  576 (597)
                      .|+++|++++||.|++|++.|.+...|.+|++..|+++.
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            999999999999999999999999999999998798764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=1.6e-24  Score=182.22  Aligned_cols=98  Identities=20%  Similarity=0.450  Sum_probs=88.9

Q ss_pred             hhhhhcccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhh
Q psy12199        177 THLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLS  256 (597)
Q Consensus       177 ~H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~  256 (597)
                      .|...+|.|+++|.|.+|++ .|.+...|..|+++|++++||.|++|++.|.+...|..|+++|++++||.|++||+.|.
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k-~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~   89 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKR-SYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFI   89 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCC-EESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEES
T ss_pred             hhceeecCCCcCeECCCCCC-CcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcC
Confidence            34444889999999999999 79999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhcccccCCcccC
Q psy12199        257 RASRLRAHLKAHSVVASNNKVQN  279 (597)
Q Consensus       257 ~~~~L~~H~~~H~~~~~~~~~~~  279 (597)
                      +.+.|..|+++|+    +++|+.
T Consensus        90 ~~~~L~~H~~~hh----~~~p~~  108 (133)
T 2lt7_A           90 NYQFMSSHIKSVH----SQDPSG  108 (133)
T ss_dssp             SHHHHHHHHHHHT----CCCTTS
T ss_pred             CHHHHHHHhHHhc----CCCCCC
Confidence            9999999999988    555543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=2.8e-24  Score=180.72  Aligned_cols=105  Identities=19%  Similarity=0.429  Sum_probs=79.8

Q ss_pred             HHHHhccCc-cccCCcChhccCCcHHHHHHhhhcC---CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCCh
Q psy12199        486 THYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHD---NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHK  561 (597)
Q Consensus       486 ~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~---~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~  561 (597)
                      .|.++|+|+ +|.|++|+++|.+...|..|+++|+   +|.|++|++.|.+...|..|+++|+|++||.|++|++.|.++
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            344566676 7777777777777777777777775   677777777777777888888888888888888888888888


Q ss_pred             hHHHhhhcccCCC-----CcccccCCCCcceeec
Q psy12199        562 ALLAEHINTKHNT-----DVTLKCQLCNVVVLIE  590 (597)
Q Consensus       562 ~~L~~H~~~~H~~-----~~~~~C~~C~~~f~~~  590 (597)
                      ..|..|++++|+.     .++|+|.+|++.|...
T Consensus        92 ~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            8888888885543     3468888888887654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=4.6e-23  Score=180.52  Aligned_cols=114  Identities=27%  Similarity=0.466  Sum_probs=108.4

Q ss_pred             CceecccccccccchhhHHHHHHh-ccCc-c--------ccCCcChhccCCcHHHHHHhhhcC---CCCCCc--CccccC
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDM-HSGE-F--------YQCDVCFKEFRSSVTLRNHTRRHD---NFSCDE--CSVECQ  531 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~-H~~e-~--------y~C~~C~~~F~~~~~L~~H~~~H~---~~~C~~--C~~~f~  531 (597)
                      .+|.|.+|++.|.+...|..|+++ |.++ +        |.|+.|++.|.+...|..|+++|+   +|.|.+  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            689999999999999999999998 7765 3        899999999999999999999996   799998  999999


Q ss_pred             ChHHHHHHHHHhhccceeecCc--CccccCChhHHHhhhcccCCCCcccccC
Q psy12199        532 DLNALRMHTLREHGYKILACEK--CDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       532 ~~~~L~~H~~~h~~~k~~~C~~--C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      +...|..|+++|++++||.|++  |++.|.+...|.+|+++ |++++||.|.
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV-HTSDKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT-TTSCCCSCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH-hcCCCCCCCC
Confidence            9999999999999999999997  99999999999999998 9999999996

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=4.5e-23  Score=173.12  Aligned_cols=113  Identities=26%  Similarity=0.440  Sum_probs=100.1

Q ss_pred             CCceecc--cccccccchhhHHHHHHhccCccccCCcChhccCCcHHHHHHhhhcC---CCCCCc--CccccCChHHHHH
Q psy12199        466 MKPYTCE--ICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKEFRSSVTLRNHTRRHD---NFSCDE--CSVECQDLNALRM  538 (597)
Q Consensus       466 ~k~~~C~--~C~~~f~~~~~L~~H~~~H~~e~y~C~~C~~~F~~~~~L~~H~~~H~---~~~C~~--C~~~f~~~~~L~~  538 (597)
                      .++|.|+  .|++.|.+...|..|+++|...+|.|+.|++.|.+...|..|+++|+   +|.|.+  |++.|.+...|..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            3789999  89999999999999999994449999999999999999999999997   799986  9999999999999


Q ss_pred             HHHHhhccceeecC--cCccccCChhHHHhhhcccCCCCcccc
Q psy12199        539 HTLREHGYKILACE--KCDVKFTHKALLAEHINTKHNTDVTLK  579 (597)
Q Consensus       539 H~~~h~~~k~~~C~--~C~~~F~~~~~L~~H~~~~H~~~~~~~  579 (597)
                      |+++|++++||.|+  .|++.|.+...|..|+++ |+++++++
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~-H~~~k~~q  124 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT-HAKAKNNQ  124 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHH-HC------
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHHHH-HcccccCC
Confidence            99999999999996  599999999999999998 88888764

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=7e-23  Score=170.66  Aligned_cols=106  Identities=35%  Similarity=0.686  Sum_probs=101.2

Q ss_pred             CCCceeccc--ccccccchhhHHHHHHhccCc-cccCC--cChhccCCcHHHHHHhhhcC---CCCCCcCccccCChHHH
Q psy12199        465 KMKPYTCEI--CSKTYTVEGSLLTHYDMHSGE-FYQCD--VCFKEFRSSVTLRNHTRRHD---NFSCDECSVECQDLNAL  536 (597)
Q Consensus       465 ~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~e-~y~C~--~C~~~F~~~~~L~~H~~~H~---~~~C~~C~~~f~~~~~L  536 (597)
                      ++++|.|++  |++.|.+...|..|+++|+++ +|.|+  .|++.|.+...|..|+++|+   +|.|++|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            348999997  999999999999999999988 99999  79999999999999999986   79999999999999999


Q ss_pred             HHHHHHhhccceeec--CcCccccCChhHHHhhhcc
Q psy12199        537 RMHTLREHGYKILAC--EKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       537 ~~H~~~h~~~k~~~C--~~C~~~F~~~~~L~~H~~~  570 (597)
                      ..|+++|++++||.|  +.|++.|.+...|.+|+++
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM  118 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhc
Confidence            999999999999999  8999999999999999987

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=2.8e-22  Score=175.44  Aligned_cols=127  Identities=22%  Similarity=0.343  Sum_probs=112.9

Q ss_pred             ccCccCceecccCccccCChhhHHhHhhhccCCCCCCC-CCCCCCcchhhhhcCCCceecccccccccchhhHHHHHHhc
Q psy12199        413 AKQHVKSVTCSVCEKAFSSKENCKAHYTRQHGNKEPKE-PKSGEGLPALEQLLKMKPYTCEICSKTYTVEGSLLTHYDMH  491 (597)
Q Consensus       413 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~~~-~~~~~~~~~~~~~~~~k~~~C~~C~~~f~~~~~L~~H~~~H  491 (597)
                      ......+|.|..|++.|.+...|..|++.+|.+..+.. ..+             .+|.|++|++.|.+...|..|+++|
T Consensus        19 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~-------------~~~~C~~C~~~f~~~~~l~~H~~~h   85 (155)
T 2rpc_A           19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------YWEECPREGKSFKAKYKLVNHIRVH   85 (155)
T ss_dssp             CCTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC-------------CBTTCTTSSCCCSSHHHHHHHTHHH
T ss_pred             echhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc-------------cccCCCCcccccCCHHHHHHHHHhc
Confidence            34456789999999999999999999997687653321 111             3489999999999999999999999


Q ss_pred             cCc-cccCCc--ChhccCCcHHHHHHhhhcC---CCCCCc--CccccCChHHHHHHHHHhhccceeecC
Q psy12199        492 SGE-FYQCDV--CFKEFRSSVTLRNHTRRHD---NFSCDE--CSVECQDLNALRMHTLREHGYKILACE  552 (597)
Q Consensus       492 ~~e-~y~C~~--C~~~F~~~~~L~~H~~~H~---~~~C~~--C~~~f~~~~~L~~H~~~h~~~k~~~C~  552 (597)
                      +++ +|.|++  |++.|.+...|..|+++|+   +|.|.+  |++.|.+...|..|+++|+|++||.|+
T Consensus        86 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           86 TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            998 999998  9999999999999999997   799997  999999999999999999999999996

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=3.1e-22  Score=168.09  Aligned_cols=105  Identities=26%  Similarity=0.567  Sum_probs=57.1

Q ss_pred             cccChhhhhHHHHHHHHHHhhhhhcccCCCccccCCCCccCCCChhhHHHHhhc---cCCCcccccccccccccCchhhh
Q psy12199        158 HECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRY---HENVREYECEICKKKFINKSTLK  234 (597)
Q Consensus       158 ~~C~~C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~---H~~~k~~~C~~C~~~F~~~~~L~  234 (597)
                      |.|++|++.|.  ....|..|++ .|.++++|.|.+|++ .|.+...|..|++.   |.++++|.|++|++.|.+...|.
T Consensus         8 ~~C~~C~~~f~--~~~~l~~H~~-~h~~~~~~~C~~C~~-~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            8 VECPTCHKKFL--SKYYLKVHNR-KHTGEKPFECPKCGK-CYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCCTTTCCCCS--SHHHHHHHHH-HHSSCCSCBCTTTCC-BCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCcCC--CHHHHHHHHH-hCCCCCCeECCCCCc-hhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            44444444444  3344444444 444444555555555 45555555555542   34555566666666666666666


Q ss_pred             hhhccccccCccccCccchhhhchHHHHHHHH
Q psy12199        235 EHSVSHMSVKPFKCEICGHYLSRASRLRAHLK  266 (597)
Q Consensus       235 ~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  266 (597)
                      .|+++|++++||.|++|++.|.+...|..|++
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            66666666666666666666666666666654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=2.8e-22  Score=167.02  Aligned_cols=107  Identities=28%  Similarity=0.629  Sum_probs=67.7

Q ss_pred             cccCh--hhhhHHHHHHHHHHhhhhhcccCCCccccC--CCCccCCCChhhHHHHhhccCCCcccccccccccccCchhh
Q psy12199        158 HECRE--CGSQFADILKHSLETHLSFIHVQDNQLKCT--ICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTL  233 (597)
Q Consensus       158 ~~C~~--C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~--~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L  233 (597)
                      |.|++  |++.|.  ....|..|++ .|.++++|.|.  .|++ .|.+...|..|++.|+++++|.|++|++.|.+...|
T Consensus         7 ~~C~~~~C~~~f~--~~~~l~~H~~-~h~~~~~~~C~~~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            7 FMCAYPGCNKRYF--KLSHLQMHSR-KHTGEKPYQCDFKDCER-RFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             BCCCSTTSCCCBS--CHHHHHHHHH-HHHTTCCEECCSTTCCC-EESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             eeCCCCCCcchhC--CHHHHHHHHH-hhCCCCCccCCCCCCcC-ccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            55554  555555  4455555555 55555666666  4666 566666666666666666666666666666666666


Q ss_pred             hhhhccccccCcccc--CccchhhhchHHHHHHHHhh
Q psy12199        234 KEHSVSHMSVKPFKC--EICGHYLSRASRLRAHLKAH  268 (597)
Q Consensus       234 ~~H~~~H~~~~~~~C--~~C~~~f~~~~~L~~H~~~H  268 (597)
                      ..|+++|+++++|.|  +.|++.|.+.+.|..|+++|
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            666666666666666  56666666666666666654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.84  E-value=5.1e-22  Score=166.65  Aligned_cols=107  Identities=24%  Similarity=0.557  Sum_probs=54.8

Q ss_pred             cccC--hhhhhHHHHHHHHHHhhhhhcccCCCccccCCCCccCCCChhhHHHHhhccCCCccccccc--ccccccCchhh
Q psy12199        158 HECR--ECGSQFADILKHSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEI--CKKKFINKSTL  233 (597)
Q Consensus       158 ~~C~--~C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~--C~~~F~~~~~L  233 (597)
                      |.|+  .|++.|.  ....|..|++ +| ++++|.|.+|++ .|.+...|..|+++|.++++|.|++  |++.|.+...|
T Consensus         6 ~~C~~~~C~~~f~--~~~~l~~H~~-~h-~~~~~~C~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            6 IACPHKGCTKMFR--DNSAMRKHLH-TH-GPRVHVCAECGK-AFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             EECCSTTCCCEES--SHHHHHHHHG-GG-SCCCEECTTTCC-EESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             ccCCCCCCcCccC--CHHHHHHHHH-Hc-CCCCeECCCCCc-hhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            4444  4554444  3444445544 44 444555555555 4555555555555555555555543  55555555555


Q ss_pred             hhhhccccccCccccC--ccchhhhchHHHHHHHHhhc
Q psy12199        234 KEHSVSHMSVKPFKCE--ICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       234 ~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~  269 (597)
                      ..|+++|+++++|.|+  .|++.|.+.+.|..|+++|+
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~  118 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA  118 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHc
Confidence            5555555555555553  25555555555555555554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=4.5e-20  Score=150.06  Aligned_cols=94  Identities=21%  Similarity=0.322  Sum_probs=85.1

Q ss_pred             HHHhccCc-cccCCcChhccCCcHHHHHHhhhcC-CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHH
Q psy12199        487 HYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHD-NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALL  564 (597)
Q Consensus       487 H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~-~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L  564 (597)
                      ++++|+++ +|.|++|++.|.+...|..|+++|. +|.|.+|++.|.....|..|++ |++++||+|++|++.|.+...|
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            35677777 8999999999999999999998887 8999999999999999999995 9999999999999999999999


Q ss_pred             HhhhcccCCCCcccccC
Q psy12199        565 AEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       565 ~~H~~~~H~~~~~~~C~  581 (597)
                      ..|++..|++++||.|.
T Consensus        86 ~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCC
Confidence            99998559999999875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.1e-18  Score=138.76  Aligned_cols=86  Identities=34%  Similarity=0.680  Sum_probs=81.5

Q ss_pred             ccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHH
Q psy12199        183 HVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLR  262 (597)
Q Consensus       183 h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  262 (597)
                      +.++++|.|.+|++ .|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|.
T Consensus         3 ~~~~~~~~C~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            3 SGSSGPHKCEVCGK-CFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCCBTTTTB-CCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCCcCeECCCCCC-ccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            56788999999999 79999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhc
Q psy12199        263 AHLKAHS  269 (597)
Q Consensus       263 ~H~~~H~  269 (597)
                      .|+++|+
T Consensus        82 ~H~~~h~   88 (96)
T 2dmd_A           82 VHLRSHT   88 (96)
T ss_dssp             HHHTTCC
T ss_pred             HHHHHhc
Confidence            9999997

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=2.1e-18  Score=140.02  Aligned_cols=85  Identities=31%  Similarity=0.595  Sum_probs=64.5

Q ss_pred             CCceecccccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhcC---CCCCCcCccccCChHHHHHHHH
Q psy12199        466 MKPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHD---NFSCDECSVECQDLNALRMHTL  541 (597)
Q Consensus       466 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~---~~~C~~C~~~f~~~~~L~~H~~  541 (597)
                      +++|.|.+|++.|.+...|..|+++|+++ +|.|++|++.|.+...|..|+++|+   +|.|.+|++.|.+...|..|++
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            47899999999999999999999998887 8888888888888888888877775   4666666666666666666666


Q ss_pred             Hhhccceee
Q psy12199        542 REHGYKILA  550 (597)
Q Consensus       542 ~h~~~k~~~  550 (597)
                      +|++++||.
T Consensus        95 ~H~~~~~~~  103 (106)
T 2ee8_A           95 LHMQTSSPT  103 (106)
T ss_dssp             HTTSCCCCC
T ss_pred             HhCCCCCCc
Confidence            666665554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=1.5e-18  Score=140.82  Aligned_cols=92  Identities=30%  Similarity=0.674  Sum_probs=79.4

Q ss_pred             ccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHH
Q psy12199        183 HVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLR  262 (597)
Q Consensus       183 h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  262 (597)
                      ...+++|.|.+|++ .|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|.
T Consensus        12 ~~~~~~~~C~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           12 SKTKKEFICKFCGR-HFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCCBCSSSCC-BCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             cCCCcCeECCCCCC-ccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            34567888999998 79889999999999888889999999999999999999999998889999999999999999999


Q ss_pred             HHHHhhcccccCCcccC
Q psy12199        263 AHLKAHSVVASNNKVQN  279 (597)
Q Consensus       263 ~H~~~H~~~~~~~~~~~  279 (597)
                      .|+++|.    ++++|.
T Consensus        91 ~H~~~H~----~~~~~~  103 (106)
T 2ee8_A           91 VHKTLHM----QTSSPT  103 (106)
T ss_dssp             HHHHHTT----SCCCCC
T ss_pred             HHHHHhC----CCCCCc
Confidence            9998887    666654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=8e-20  Score=150.85  Aligned_cols=95  Identities=19%  Similarity=0.244  Sum_probs=85.7

Q ss_pred             chhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhh--cC---C-CCCCcCcccc--CChHHHHHHHHHhhccceee
Q psy12199        480 VEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRR--HD---N-FSCDECSVEC--QDLNALRMHTLREHGYKILA  550 (597)
Q Consensus       480 ~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~--H~---~-~~C~~C~~~f--~~~~~L~~H~~~h~~~k~~~  550 (597)
                      +...|..|+++|+++ ||.|++|++.|.+...|..|+++  |.   + +.|.+|++.|  .....|..|+++|++++||.
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            456788899999998 99999999999999999999998  64   3 5599999998  89999999999999999999


Q ss_pred             cCcCccccCChhHHHhhhcccCCC
Q psy12199        551 CEKCDVKFTHKALLAEHINTKHNT  574 (597)
Q Consensus       551 C~~C~~~F~~~~~L~~H~~~~H~~  574 (597)
                      |++|++.|.+...|.+|++++|..
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCc
Confidence            999999999999999999995543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.7e-18  Score=135.13  Aligned_cols=82  Identities=24%  Similarity=0.482  Sum_probs=56.6

Q ss_pred             cccCCcChhccCCcHHHHHHhhhcC---CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhccc
Q psy12199        495 FYQCDVCFKEFRSSVTLRNHTRRHD---NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTK  571 (597)
Q Consensus       495 ~y~C~~C~~~F~~~~~L~~H~~~H~---~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~  571 (597)
                      ||.|++|++.|.+...|..|+++|.   +|.|.+|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++ 
T Consensus         8 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-   86 (96)
T 2dmd_A            8 PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRS-   86 (96)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTT-
T ss_pred             CeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHH-
Confidence            4555555555555555555555554   456666666666666666777777788889999999999999999999888 


Q ss_pred             CCCCcc
Q psy12199        572 HNTDVT  577 (597)
Q Consensus       572 H~~~~~  577 (597)
                      |.++++
T Consensus        87 h~~~~~   92 (96)
T 2dmd_A           87 HTGDSG   92 (96)
T ss_dssp             CCSCCC
T ss_pred             hcCCCC
Confidence            655543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=1.6e-18  Score=143.03  Aligned_cols=95  Identities=23%  Similarity=0.348  Sum_probs=87.0

Q ss_pred             HHHHhhhhhcccCCCccccCCCCccCCCChhhHHHHhhc--cCCCcccc-cccccccc--cCchhhhhhhccccccCccc
Q psy12199        173 HSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRY--HENVREYE-CEICKKKF--INKSTLKEHSVSHMSVKPFK  247 (597)
Q Consensus       173 ~~l~~H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~--H~~~k~~~-C~~C~~~F--~~~~~L~~H~~~H~~~~~~~  247 (597)
                      ..|..|++ +|.++++|.|.+|++ .|.+...|..|+++  |.+++++. |++|++.|  .+...|..|+++|++++||.
T Consensus         5 ~~l~~H~~-~H~~~~~~~C~~C~k-~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            5 SSGKLYGS-IFTGASKFRCKDCSA-AYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCC-CCCCCCSEEBSSSSC-EESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             hhhhhhee-eeCCCCCEECCccCc-hhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            45778887 899999999999999 79999999999998  77777665 99999999  89999999999999999999


Q ss_pred             cCccchhhhchHHHHHHHHhhc
Q psy12199        248 CEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       248 C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      |++|++.|.+.+.|..|+++|+
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhC
Confidence            9999999999999999999987

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.72  E-value=2.1e-18  Score=135.39  Aligned_cols=84  Identities=31%  Similarity=0.726  Sum_probs=76.5

Q ss_pred             CCCccccC--CCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHH
Q psy12199        185 QDNQLKCT--ICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLR  262 (597)
Q Consensus       185 ~~~~~~C~--~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  262 (597)
                      ++++|.|+  .|++ .|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+.+.|.
T Consensus         1 ~~k~~~C~~~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            1 MERPYACPVESCDR-RFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             --CCEECCSSSCCC-EESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCCceECCCCCCCC-ccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            36789998  5999 79999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhc
Q psy12199        263 AHLKAHS  269 (597)
Q Consensus       263 ~H~~~H~  269 (597)
                      .|+++|+
T Consensus        80 ~H~~~H~   86 (90)
T 1a1h_A           80 RHTKIHL   86 (90)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhc
Confidence            9999987

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.72  E-value=1.9e-18  Score=132.94  Aligned_cols=81  Identities=40%  Similarity=0.840  Sum_probs=76.1

Q ss_pred             ccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHh
Q psy12199        188 QLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKA  267 (597)
Q Consensus       188 ~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~  267 (597)
                      ||.|.+|++ .|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+.+.|..|+++
T Consensus         1 ~~~C~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGK-SFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCC-EESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcc-cccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            588999999 7999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hc
Q psy12199        268 HS  269 (597)
Q Consensus       268 H~  269 (597)
                      |+
T Consensus        80 H~   81 (82)
T 2kmk_A           80 HT   81 (82)
T ss_dssp             HC
T ss_pred             hC
Confidence            86

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=4e-18  Score=131.18  Aligned_cols=77  Identities=27%  Similarity=0.594  Sum_probs=51.8

Q ss_pred             ccCCcChhccCCcHHHHHHhhhcC---CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccC
Q psy12199        496 YQCDVCFKEFRSSVTLRNHTRRHD---NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       496 y~C~~C~~~F~~~~~L~~H~~~H~---~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      |.|+.|++.|.+...|..|+++|.   +|.|..|++.|.+...|..|+++|++++||.|+.|++.|.+...|..|+++ |
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H   80 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK-H   80 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH-H
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh-h
Confidence            445555555555555555555443   455666666666666666777777788888888888888888888888887 5


Q ss_pred             C
Q psy12199        573 N  573 (597)
Q Consensus       573 ~  573 (597)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=3.3e-18  Score=138.95  Aligned_cols=95  Identities=19%  Similarity=0.349  Sum_probs=78.7

Q ss_pred             hhhhcccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhc
Q psy12199        178 HLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSR  257 (597)
Q Consensus       178 H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~  257 (597)
                      +++ .|.++++|.|.+|++ .|.....|..|+++|  +++|.|++|++.|.+...|..|++ |++++||.|++|++.|.+
T Consensus         7 ~~~-~h~~~~~~~C~~C~~-~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~   81 (107)
T 1wjp_A            7 GAS-PVENKEVYQCRLCNA-KLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKS   81 (107)
T ss_dssp             CCC-CCCCCCCCBCTTTCC-BCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSS
T ss_pred             cCc-ccCCCcCeECCCCCC-ccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCC
Confidence            344 678888888988988 688888888888888  478889999999988888998985 888888999999999999


Q ss_pred             hHHHHHHHH-hhcccccCCcccCCc
Q psy12199        258 ASRLRAHLK-AHSVVASNNKVQNCK  281 (597)
Q Consensus       258 ~~~L~~H~~-~H~~~~~~~~~~~C~  281 (597)
                      ...|..|++ +|.    ++++|.+.
T Consensus        82 ~~~L~~H~~~~H~----~~~~~~~~  102 (107)
T 1wjp_A           82 SFSIWRHQVEVHN----QNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHHTSC----CCCCCCCC
T ss_pred             HHHHHHHHHHHcC----CCCCCCCC
Confidence            899999986 776    66666543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.71  E-value=5e-18  Score=133.19  Aligned_cols=85  Identities=28%  Similarity=0.627  Sum_probs=54.8

Q ss_pred             CCceecc--cccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhcCCCCCCcCccccCChHHHHHHHHH
Q psy12199        466 MKPYTCE--ICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLR  542 (597)
Q Consensus       466 ~k~~~C~--~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~~~~C~~C~~~f~~~~~L~~H~~~  542 (597)
                      ++||.|+  .|++.|.+...|..|+++|+++ +|.|+.|+                         +.|.+...|..|+++
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~-------------------------~~f~~~~~l~~H~~~   56 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICM-------------------------RNFSRSDHLTTHIRT   56 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTC-------------------------CEESCHHHHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCC-------------------------cccCCHHHHHHHHHH
Confidence            4566665  3666666666666666666554 55555555                         455555555556666


Q ss_pred             hhccceeecCcCccccCChhHHHhhhcccCCCCc
Q psy12199        543 EHGYKILACEKCDVKFTHKALLAEHINTKHNTDV  576 (597)
Q Consensus       543 h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~  576 (597)
                      |++++||.|++|++.|.+...|..|+++ |++++
T Consensus        57 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-H~~~k   89 (90)
T 1a1h_A           57 HTGEKPFACDICGRKFARSDERKRHTKI-HLRQK   89 (90)
T ss_dssp             HHCCCCEECTTTCCEESSHHHHHHHHGG-GGC--
T ss_pred             cCCCCCccCCCCCchhCCHHHHHHHHHH-hcccC
Confidence            6777888888888888888888888877 66554

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=5.2e-18  Score=138.62  Aligned_cols=86  Identities=29%  Similarity=0.598  Sum_probs=83.4

Q ss_pred             cccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHH
Q psy12199        182 IHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRL  261 (597)
Q Consensus       182 ~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L  261 (597)
                      .|+++++|.| .|++ .|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|.++++|.|++|++.|.+...|
T Consensus         4 ~h~~~k~~~C-~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGK-SFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSC-EESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCC-ccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            6889999999 9999 7999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhc
Q psy12199        262 RAHLKAHS  269 (597)
Q Consensus       262 ~~H~~~H~  269 (597)
                      ..|++.|+
T Consensus        82 ~~H~~~~~   89 (110)
T 2csh_A           82 HRHVTSCT   89 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHcc
Confidence            99999986

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=6.5e-18  Score=134.01  Aligned_cols=85  Identities=33%  Similarity=0.677  Sum_probs=79.0

Q ss_pred             cCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhcccccc--CccccCccchhhhchHHH
Q psy12199        184 VQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSV--KPFKCEICGHYLSRASRL  261 (597)
Q Consensus       184 ~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~--~~~~C~~C~~~f~~~~~L  261 (597)
                      +++++|.|.+|++ .|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|+++  ++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            3 SGSSGVACEICGK-IFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             CCCSCEECSSSCC-EESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCCCCeECCCCCC-ccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            5678999999999 7999999999999999999999999999999999999999999987  899999999999999999


Q ss_pred             HHHHH-hhc
Q psy12199        262 RAHLK-AHS  269 (597)
Q Consensus       262 ~~H~~-~H~  269 (597)
                      ..|++ .|.
T Consensus        82 ~~H~~~~H~   90 (95)
T 2yt9_A           82 NGHIKQVHS   90 (95)
T ss_dssp             HHHHHHTSC
T ss_pred             HHHHHHhcC
Confidence            99986 675

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.3e-17  Score=132.22  Aligned_cols=85  Identities=31%  Similarity=0.516  Sum_probs=56.9

Q ss_pred             CCceecccccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhcCCCCCCcCccccCChHHHHHHHHHhh
Q psy12199        466 MKPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREH  544 (597)
Q Consensus       466 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~~~~C~~C~~~f~~~~~L~~H~~~h~  544 (597)
                      +++|.|++|++.|.+...|..|+++|+++ +|.|++|++.|                         .+...|..|++.|+
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-------------------------~~~~~l~~H~~~h~   59 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF-------------------------KRKDRMSYHVRSHD   59 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEE-------------------------SCHHHHHHHHHHHC
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCcc-------------------------CCHHHHHHHHHHhc
Confidence            45666666666666666666666666554 55555555555                         45555555555566


Q ss_pred             cc--ceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        545 GY--KILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       545 ~~--k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      ++  +||.|++|++.|.+...|..|++..|+++
T Consensus        60 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           60 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             CCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            65  88888889888988888988987558765

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=2.8e-17  Score=134.25  Aligned_cols=81  Identities=30%  Similarity=0.547  Sum_probs=47.5

Q ss_pred             CCceecccccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhcCCCCCCcCccccCChHHHHHHHHHhh
Q psy12199        466 MKPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLREH  544 (597)
Q Consensus       466 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~~~~C~~C~~~f~~~~~L~~H~~~h~  544 (597)
                      +++|.| .|++.|.+...|..|+++|+++ +|.|++|++.|.+.                         ..|..|+++|+
T Consensus         8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~-------------------------~~l~~H~~~h~   61 (110)
T 2csh_A            8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMK-------------------------HHLVGHMKIHT   61 (110)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSS-------------------------HHHHHHHTTTC
T ss_pred             CCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCH-------------------------HHHHHHHHHcC
Confidence            455555 5555555555555555555554 45555555555554                         45555555555


Q ss_pred             ccceeecCcCccccCChhHHHhhhcccC
Q psy12199        545 GYKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       545 ~~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      ++++|.|++|++.|.+...|..|++++|
T Consensus        62 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           62 GIKPYECNICAKRFMWRDSFHRHVTSCT   89 (110)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             CCCCeeCCCCcchhcCHHHHHHHHHHcc
Confidence            6667777777777777777777776633

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.67  E-value=2.3e-17  Score=116.19  Aligned_cols=57  Identities=28%  Similarity=0.538  Sum_probs=29.2

Q ss_pred             CCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        186 DNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       186 ~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      |+||+|.+||+ .|.....|..|+++|+|++||.|++||+.|...++|..|+++|+|+
T Consensus         2 EKpy~C~~C~k-~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGK-TYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCC-EESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCC-EeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            44555555555 4555555555555555555555555555555555555555555444

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.65  E-value=8.4e-17  Score=113.27  Aligned_cols=56  Identities=23%  Similarity=0.535  Sum_probs=51.4

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCc
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDV  576 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~  576 (597)
                      ||.|++||+.|.....|..|+++|+|++||.|++||++|.+.++|.+|+++ |++++
T Consensus         4 py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~-Htgep   59 (60)
T 4gzn_C            4 PFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKV-HQNKP   59 (60)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGG-GSCC-
T ss_pred             CccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCc-cCCCC
Confidence            788888888999999999999999999999999999999999999999998 98874

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.64  E-value=7.4e-17  Score=126.15  Aligned_cols=82  Identities=30%  Similarity=0.674  Sum_probs=74.7

Q ss_pred             CCccccCC--CCccCCCChhhHHHHhhccCCCcccccc--cccccccCchhhhhhhccccccCccccCccchhhhchHHH
Q psy12199        186 DNQLKCTI--CNKENFKNQLSLSIHMRYHENVREYECE--ICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRL  261 (597)
Q Consensus       186 ~~~~~C~~--C~k~~f~~~~~L~~H~~~H~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L  261 (597)
                      ..+|.|.+  |++ .|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+.+.|
T Consensus         3 ~~~~~C~~~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGK-TYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCC-EESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCC-cCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            46789998  999 799999999999999999999997  5999999999999999999999999999999999999999


Q ss_pred             HHHHHhh
Q psy12199        262 RAHLKAH  268 (597)
Q Consensus       262 ~~H~~~H  268 (597)
                      ..|+++|
T Consensus        82 ~~H~~~H   88 (89)
T 2wbs_A           82 ALHMKRH   88 (89)
T ss_dssp             HHHGGGG
T ss_pred             HHHHHhh
Confidence            9999887

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.64  E-value=2.2e-17  Score=128.63  Aligned_cols=78  Identities=26%  Similarity=0.483  Sum_probs=61.9

Q ss_pred             CceecccccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhcC--CCCCCcCccccCChHHHHHHHHHh
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHD--NFSCDECSVECQDLNALRMHTLRE  543 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~--~~~C~~C~~~f~~~~~L~~H~~~h  543 (597)
                      +||.|++|++.|.+...|..|+++|+++ ||.|+.|++.|.+...|..|+++|+  +|.|..|++.|.+...|..|++.+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARL   81 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHH
Confidence            7899999999999999999999999887 8888888888888888888887776  466666666666666666666554


Q ss_pred             h
Q psy12199        544 H  544 (597)
Q Consensus       544 ~  544 (597)
                      +
T Consensus        82 h   82 (88)
T 1llm_C           82 K   82 (88)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.64  E-value=3.1e-17  Score=127.84  Aligned_cols=83  Identities=24%  Similarity=0.468  Sum_probs=78.1

Q ss_pred             CCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHH
Q psy12199        186 DNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHL  265 (597)
Q Consensus       186 ~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~  265 (597)
                      ++||.|.+|++ .|.....|..|+++|++++||.|++|++.|.+...|..|+++|++ .+|.|+.|++.|.+...|..|+
T Consensus         1 ek~~~C~~C~k-~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMR-NFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCC-EESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCC-ccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            57899999999 799999999999999999999999999999999999999999985 7899999999999999999999


Q ss_pred             Hhhcc
Q psy12199        266 KAHSV  270 (597)
Q Consensus       266 ~~H~~  270 (597)
                      +.++.
T Consensus        79 ~~~h~   83 (88)
T 1llm_C           79 ARLKK   83 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87763

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.63  E-value=2e-16  Score=126.68  Aligned_cols=84  Identities=30%  Similarity=0.659  Sum_probs=77.3

Q ss_pred             CCCccccCC--CCccCCCChhhHHHHhhccCCCcccccc--cccccccCchhhhhhhccccccCccccCccchhhhchHH
Q psy12199        185 QDNQLKCTI--CNKENFKNQLSLSIHMRYHENVREYECE--ICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASR  260 (597)
Q Consensus       185 ~~~~~~C~~--C~k~~f~~~~~L~~H~~~H~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~  260 (597)
                      ..++|.|.+  |++ .|.....|..|++.|.++++|.|+  .|++.|.+...|..|+++|++++||.|++|++.|.+...
T Consensus        12 ~~~~~~C~~~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           12 KRRIHYCDYPGCTK-VYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             SCCCEECCSSSCCC-EESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             cCcceEcCCCCCCC-cccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            456899986  999 799999999999999999999996  599999999999999999999999999999999999999


Q ss_pred             HHHHHHhhc
Q psy12199        261 LRAHLKAHS  269 (597)
Q Consensus       261 L~~H~~~H~  269 (597)
                      |..|+++|.
T Consensus        91 l~~H~~~H~   99 (100)
T 2ebt_A           91 LALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999985

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.62  E-value=5.9e-16  Score=123.92  Aligned_cols=81  Identities=33%  Similarity=0.607  Sum_probs=57.2

Q ss_pred             CCCceeccc--ccccccchhhHHHHHHhccCc-cccCC--cChhccCCcHHHHHHhhhcCCCCCCcCccccCChHHHHHH
Q psy12199        465 KMKPYTCEI--CSKTYTVEGSLLTHYDMHSGE-FYQCD--VCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMH  539 (597)
Q Consensus       465 ~~k~~~C~~--C~~~f~~~~~L~~H~~~H~~e-~y~C~--~C~~~F~~~~~L~~H~~~H~~~~C~~C~~~f~~~~~L~~H  539 (597)
                      ..++|.|.+  |++.|.....|..|+++|+++ +|.|+  .|++.|.+...|..|+++                      
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------------------   69 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK----------------------   69 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHH----------------------
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHH----------------------
Confidence            447888886  888888888888888888876 77775  466666666665555554                      


Q ss_pred             HHHhhccceeecCcCccccCChhHHHhhhcc
Q psy12199        540 TLREHGYKILACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       540 ~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                         |++++||.|++|++.|.+...|..|+++
T Consensus        70 ---h~~~~~~~C~~C~~~f~~~~~l~~H~~~   97 (100)
T 2ebt_A           70 ---HTGAKPFQCGVCNRSFSRSDHLALHMKR   97 (100)
T ss_dssp             ---HTSCCSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             ---hCCCCCeECCCCcCccCCHHHHHHHHHH
Confidence               4566666666666666666666666665

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.61  E-value=6.7e-16  Score=120.65  Aligned_cols=82  Identities=35%  Similarity=0.677  Sum_probs=58.3

Q ss_pred             Cceeccc--ccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhcCCCCCCcCccccCChHHHHHHHHHh
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHDNFSCDECSVECQDLNALRMHTLRE  543 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~~~~C~~C~~~f~~~~~L~~H~~~h  543 (597)
                      ++|.|++  |++.|.+...|..|+++|+++ +|.|+.                       ..|++.|.+...|..|+++|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~-----------------------~~C~~~f~~~~~l~~H~~~h   60 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDW-----------------------DGCGWKFARSDELTRHYRKH   60 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCS-----------------------TTTCCEESSHHHHHHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCC-----------------------CCCCCccCCHHHHHHHHHHc
Confidence            4566666  666666666666666666654 555542                       13556666666666777778


Q ss_pred             hccceeecCcCccccCChhHHHhhhcccC
Q psy12199        544 HGYKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       544 ~~~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      ++++||.|++|++.|.+...|..|+++ |
T Consensus        61 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-H   88 (89)
T 2wbs_A           61 TGHRPFQCQKCDRAFSRSDHLALHMKR-H   88 (89)
T ss_dssp             HCCCCEECSSSSCEESSHHHHHHHGGG-G
T ss_pred             CCCCCccCCCCCcccCCHHHHHHHHHh-h
Confidence            889999999999999999999999987 5

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.60  E-value=4.7e-16  Score=120.33  Aligned_cols=76  Identities=26%  Similarity=0.537  Sum_probs=49.9

Q ss_pred             ceec--ccccccccchhhHHHHHHhccCc-cccCCc--ChhccCCcHHHHHHhhhcCCCCCCc---CccccCChHHHHHH
Q psy12199        468 PYTC--EICSKTYTVEGSLLTHYDMHSGE-FYQCDV--CFKEFRSSVTLRNHTRRHDNFSCDE---CSVECQDLNALRMH  539 (597)
Q Consensus       468 ~~~C--~~C~~~f~~~~~L~~H~~~H~~e-~y~C~~--C~~~F~~~~~L~~H~~~H~~~~C~~---C~~~f~~~~~L~~H  539 (597)
                      ||.|  +.||+.|.+...|..|+++|+++ ||.|+.  |++.|.+...|..|+++|+.|.|..   |++.|.+...|..|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~f~~~~~l~~H   80 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH   80 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCEESSHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCccCCHHHHHHH
Confidence            4677  77777777777777777777776 777766  7777777666666666665555555   55555555555555


Q ss_pred             HHHh
Q psy12199        540 TLRE  543 (597)
Q Consensus       540 ~~~h  543 (597)
                      +++|
T Consensus        81 ~~~h   84 (85)
T 2j7j_A           81 VAEC   84 (85)
T ss_dssp             HHHC
T ss_pred             HHhc
Confidence            5444

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=1e-15  Score=118.44  Aligned_cols=78  Identities=28%  Similarity=0.507  Sum_probs=69.0

Q ss_pred             cccc--CCCCccCCCChhhHHHHhhccCCCccccccc--ccccccCchhhhhhhccccccCccccCc---cchhhhchHH
Q psy12199        188 QLKC--TICNKENFKNQLSLSIHMRYHENVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKCEI---CGHYLSRASR  260 (597)
Q Consensus       188 ~~~C--~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~C~~---C~~~f~~~~~  260 (597)
                      ||.|  ..|++ .|.+...|..|+++|.++++|.|++  |++.|.+...|..|+++|++   |.|+.   |++.|.+.+.
T Consensus         1 p~~C~~~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGK-AFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCC-EESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCc-ccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHH
Confidence            5788  88998 7999999999999998999999988  99999999999999998888   88988   9999999999


Q ss_pred             HHHHHHhhc
Q psy12199        261 LRAHLKAHS  269 (597)
Q Consensus       261 L~~H~~~H~  269 (597)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            999988774

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.2e-15  Score=116.20  Aligned_cols=71  Identities=28%  Similarity=0.558  Sum_probs=57.5

Q ss_pred             cCCCccccCC--CCccCCCChhhHHHHhh-ccCCCccccccc--ccccccCchhhhhhhccccccCccccCccchhh
Q psy12199        184 VQDNQLKCTI--CNKENFKNQLSLSIHMR-YHENVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKCEICGHYL  255 (597)
Q Consensus       184 ~~~~~~~C~~--C~k~~f~~~~~L~~H~~-~H~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f  255 (597)
                      +++++|.|..  |++ .|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|++++||.|++|++.|
T Consensus         3 ~~~~~~~C~~~~C~~-~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGR-IFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCC-EESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcC-ccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4567788876  888 6888888888887 688888888887  888888888888888888888888888888777

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.4e-15  Score=114.39  Aligned_cols=67  Identities=22%  Similarity=0.440  Sum_probs=46.1

Q ss_pred             CCCCCc--CccccCChHHHHHHHH-HhhccceeecCc--CccccCChhHHHhhhcccCCCCcccccCCCCcce
Q psy12199        520 NFSCDE--CSVECQDLNALRMHTL-REHGYKILACEK--CDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVV  587 (597)
Q Consensus       520 ~~~C~~--C~~~f~~~~~L~~H~~-~h~~~k~~~C~~--C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~~~f  587 (597)
                      +|.|..  |++.|.+...|..|++ .|.+++||.|++  |++.|.++..|.+|+++ |++++||+|++||++|
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL-HSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHH-HHTSCCCSCCSSSCCC
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHH-hCCCCCeeCCCCCCCC
Confidence            345554  6666666666666666 566777777776  77777777777777776 6677777777777766

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2.4e-15  Score=116.61  Aligned_cols=66  Identities=21%  Similarity=0.415  Sum_probs=41.8

Q ss_pred             CCCCcCccccCChHHHHHHHHHhhcc----ceeecCcCccccCChhHHHhhhcccCCCCcccccCCCCcce
Q psy12199        521 FSCDECSVECQDLNALRMHTLREHGY----KILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVV  587 (597)
Q Consensus       521 ~~C~~C~~~f~~~~~L~~H~~~h~~~----k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~~~f  587 (597)
                      |.|.+|++.|.....|..|+++|+++    ++|.|++|++.|.....|..|+++ |.+++++.|..||.+|
T Consensus        16 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN-CAGPDGVEGENSGPSS   85 (86)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHH-CCCCCSCCCCCCCCCC
T ss_pred             CcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHH-ccCCCCcccCCCCCCC
Confidence            44444444444444444444444443    677777777777777777777777 6777777777777654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=2e-15  Score=117.04  Aligned_cols=76  Identities=20%  Similarity=0.446  Sum_probs=38.6

Q ss_pred             HhhhhhcccCCCccccCCCCccCCCChhhHHHHhhccCCC----cccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        176 ETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENV----REYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       176 ~~H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~----k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .+|++ +|.++++|.|.+|++ .|.....|..|++.|+++    ++|.|++|++.|.+...|..|+++|++++++.|..|
T Consensus         4 ~~H~~-~H~~~k~~~C~~C~~-~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            4 GSSGR-THTGEKPYACSHCDK-TFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TCCST-TCCCCCCEECSSSSC-EESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             ccccc-eecCCCCCcCCCCCC-ccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            34444 455555555555555 455555555555444332    445555555555555555555555555555555555


Q ss_pred             ch
Q psy12199        252 GH  253 (597)
Q Consensus       252 ~~  253 (597)
                      +.
T Consensus        82 ~~   83 (86)
T 1x6h_A           82 GP   83 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=6.8e-15  Score=111.19  Aligned_cols=66  Identities=32%  Similarity=0.575  Sum_probs=51.2

Q ss_pred             cccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCcccc
Q psy12199        182 IHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC  248 (597)
Q Consensus       182 ~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  248 (597)
                      .+.++++|.|.+|++ .|.....|..|+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        12 ~~~~~~~~~C~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGK-SFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCC-BCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCc-ccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            455667778888887 677777888888777777778888888888888888888877877777776

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=3e-15  Score=118.84  Aligned_cols=78  Identities=18%  Similarity=0.176  Sum_probs=70.6

Q ss_pred             CCCChhhHHHHhhccCCCccccccccccccc-Cchhhhhhhccccc-cCccccCccchhhhchHHHHHHHHhhcccccCC
Q psy12199        198 NFKNQLSLSIHMRYHENVREYECEICKKKFI-NKSTLKEHSVSHMS-VKPFKCEICGHYLSRASRLRAHLKAHSVVASNN  275 (597)
Q Consensus       198 ~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~-~~~~L~~H~~~H~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  275 (597)
                      .+.....+..|+++|.++++|.|++|++.|. +...|..|+++|++ +++|.|++|++.|.+...|..|+++|+    ++
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~----~~   80 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH----SA   80 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHS----CS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHc----CC
Confidence            3566677889999999999999999999999 99999999999999 999999999999999999999999998    55


Q ss_pred             cccC
Q psy12199        276 KVQN  279 (597)
Q Consensus       276 ~~~~  279 (597)
                      ++..
T Consensus        81 kp~~   84 (98)
T 2gqj_A           81 KPSD   84 (98)
T ss_dssp             CSSC
T ss_pred             CCCC
Confidence            5543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.1e-14  Score=108.47  Aligned_cols=60  Identities=23%  Similarity=0.465  Sum_probs=50.7

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCccccc
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKC  580 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C  580 (597)
                      +|.|.+|++.|.....|..|+++|++++||.|++|++.|.....|.+|+++ |++++||+|
T Consensus        18 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~p~~C   77 (77)
T 2cot_A           18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV-HTGSGPSSG   77 (77)
T ss_dssp             SSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGG-SCCCCCCCC
T ss_pred             CEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHH-hCCCCCCCC
Confidence            577777777777777777777778889999999999999999999999987 888999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.1e-14  Score=114.80  Aligned_cols=68  Identities=19%  Similarity=0.280  Sum_probs=52.6

Q ss_pred             cCCCccccCCCCccCCCChhhHHHHhh-cc---CCCcccccccccccccCchhhhhh-hccccccCccccCccc
Q psy12199        184 VQDNQLKCTICNKENFKNQLSLSIHMR-YH---ENVREYECEICKKKFINKSTLKEH-SVSHMSVKPFKCEICG  252 (597)
Q Consensus       184 ~~~~~~~C~~C~k~~f~~~~~L~~H~~-~H---~~~k~~~C~~C~~~F~~~~~L~~H-~~~H~~~~~~~C~~C~  252 (597)
                      .+++||.|.+|++ .|.....|..|++ .|   .+++||.|.+||+.|.+...|..| +++|++++||.|.++.
T Consensus        14 ~gekpy~C~~Cgk-~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTF-QTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSC-EESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCC-ccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            5677888888887 6888888888876 47   557788888888888888888888 6788888888887643

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.48  E-value=4.7e-15  Score=124.79  Aligned_cols=104  Identities=18%  Similarity=0.189  Sum_probs=81.3

Q ss_pred             CCCceecccccccccchhhHHHHHHhccC----ccccCCcChhccC------CcHHHHHHhhhcC---CCCCCcCccccC
Q psy12199        465 KMKPYTCEICSKTYTVEGSLLTHYDMHSG----EFYQCDVCFKEFR------SSVTLRNHTRRHD---NFSCDECSVECQ  531 (597)
Q Consensus       465 ~~k~~~C~~C~~~f~~~~~L~~H~~~H~~----e~y~C~~C~~~F~------~~~~L~~H~~~H~---~~~C~~C~~~f~  531 (597)
                      +.++|.|...+...  ...+..|.+.+..    .++.|++|++.|.      ....|..|++ |+   +|.|++||+.|.
T Consensus         9 ~~k~~~~~~k~~~~--~~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~-h~~~~~~~C~~C~k~f~   85 (129)
T 2wbt_A            9 GSKKYLSNHKGIFI--HVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA-SKAISQFVCPLCLMPFS   85 (129)
T ss_dssp             TCCGGGGCSSCEEE--ECCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHH-HHHHCSEECTTTCCEES
T ss_pred             cccccccccCCeee--eecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHH-hCCCCCeECCCCCcccC
Confidence            34889887765433  2344555444432    2788999887765      6677777774 54   899999999999


Q ss_pred             ChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCC
Q psy12199        532 DLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHN  573 (597)
Q Consensus       532 ~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~  573 (597)
                      ....|..|+++|  ++||.|++|++.|.+...|.+|++++|+
T Consensus        86 ~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           86 SSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             SHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             CHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            999999999998  8999999999999999999999999443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.4e-14  Score=113.97  Aligned_cols=71  Identities=17%  Similarity=0.262  Sum_probs=62.9

Q ss_pred             CCCChhhHHHHhhccCCCcccccccccccc-cCchhhhhhhccccccCccccCccchhhhchHHHHHH-HHhhc
Q psy12199        198 NFKNQLSLSIHMRYHENVREYECEICKKKF-INKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAH-LKAHS  269 (597)
Q Consensus       198 ~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F-~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~  269 (597)
                      .|.....|..|++.|.++++|.|++|++.| .+...|..|+++| +++||.|.+|++.|...+.|..| +++|+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            577788888898888888999999999999 8999999999999 88999999999999999999999 88885

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.47  E-value=9e-15  Score=123.02  Aligned_cols=79  Identities=22%  Similarity=0.358  Sum_probs=70.4

Q ss_pred             Cceeccccccccc------chhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhcC-CCCCCcCccccCChHHHHH
Q psy12199        467 KPYTCEICSKTYT------VEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHD-NFSCDECSVECQDLNALRM  538 (597)
Q Consensus       467 k~~~C~~C~~~f~------~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~-~~~C~~C~~~f~~~~~L~~  538 (597)
                      +++.|++|++.|.      ....|..|+ .|+++ ||.|++|++.|.....|..|+++|. +|.|++|++.|.....|..
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~  118 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALD  118 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHH
Confidence            6788999888776      556666776 57777 9999999999999999999999985 8999999999999999999


Q ss_pred             HHHHhhcc
Q psy12199        539 HTLREHGY  546 (597)
Q Consensus       539 H~~~h~~~  546 (597)
                      |+++|+|+
T Consensus       119 H~~~h~~~  126 (129)
T 2wbt_A          119 HVCKKHNI  126 (129)
T ss_dssp             HHHHTTCC
T ss_pred             HHHHHCCc
Confidence            99999986

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.8e-14  Score=107.17  Aligned_cols=62  Identities=34%  Similarity=0.604  Sum_probs=52.0

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhhc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      +.++|+++++|.|++|++.|.+...|..|+++|.+++||.|++|++.|.+...|..|+++|+
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            34677888888888888888888888888888888888888888888888888888888886

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.47  E-value=2.4e-14  Score=107.13  Aligned_cols=64  Identities=30%  Similarity=0.634  Sum_probs=45.5

Q ss_pred             cccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCcc
Q psy12199        182 IHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPF  246 (597)
Q Consensus       182 ~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~  246 (597)
                      .+.++++|+|..|++ .|.....|..|+++|+++++|.|.+|++.|.+...|.+|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k-~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQA-SFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSC-CBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCc-eeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            455666777777777 5777777777777777777777777777777777777777777777665

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=4.3e-14  Score=111.10  Aligned_cols=74  Identities=15%  Similarity=0.274  Sum_probs=48.8

Q ss_pred             cCCcHHHHHHhhhcC---CCCCCcCcccc-CChHHHHHHHHHhhccceeecCcCccccCChhHHHhh-hcccCCCCcccc
Q psy12199        505 FRSSVTLRNHTRRHD---NFSCDECSVEC-QDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEH-INTKHNTDVTLK  579 (597)
Q Consensus       505 F~~~~~L~~H~~~H~---~~~C~~C~~~f-~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H-~~~~H~~~~~~~  579 (597)
                      |.....|..|++.|.   +|.|+.|++.| .+...|..|+++| +++||.|.+|++.|..+..|..| +++ |+++..|.
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~-H~~~p~~~   93 (96)
T 2ctd_A           16 YAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMAN-HNSLPSGP   93 (96)
T ss_dssp             SCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHH-TCCCSSCS
T ss_pred             CCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHh-cCCCCCCC
Confidence            334444444444433   45555566666 5666667777777 88888888888888888888888 665 77655554


Q ss_pred             c
Q psy12199        580 C  580 (597)
Q Consensus       580 C  580 (597)
                      +
T Consensus        94 ~   94 (96)
T 2ctd_A           94 S   94 (96)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=2.5e-14  Score=112.84  Aligned_cols=64  Identities=20%  Similarity=0.439  Sum_probs=45.0

Q ss_pred             CCCCCcCccccCChHHHHHHHH-Hh---hccceeecCcCccccCChhHHHhh-hcccCCCCcccccCCCC
Q psy12199        520 NFSCDECSVECQDLNALRMHTL-RE---HGYKILACEKCDVKFTHKALLAEH-INTKHNTDVTLKCQLCN  584 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~-~h---~~~k~~~C~~C~~~F~~~~~L~~H-~~~~H~~~~~~~C~~C~  584 (597)
                      +|.|..||+.|.....|..|++ .|   .+++||.|++||+.|..+..|..| +++ |++++||+|.++.
T Consensus        18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~-Htgekpy~C~~~~   86 (102)
T 2ghf_A           18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY-HPGEENFKLTMVK   86 (102)
T ss_dssp             SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHT-STTCCCEEEEECC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh-cCCCCCeeCCccc
Confidence            4555556666666666666665 35   457788888888888888888888 565 8888888887754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=2.4e-14  Score=113.58  Aligned_cols=70  Identities=21%  Similarity=0.306  Sum_probs=41.3

Q ss_pred             HHHHHHhhhcC---CCCCCcCccccC-ChHHHHHHHHHhhc-cceeecCcCccccCChhHHHhhhcccCCCCcccc
Q psy12199        509 VTLRNHTRRHD---NFSCDECSVECQ-DLNALRMHTLREHG-YKILACEKCDVKFTHKALLAEHINTKHNTDVTLK  579 (597)
Q Consensus       509 ~~L~~H~~~H~---~~~C~~C~~~f~-~~~~L~~H~~~h~~-~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~  579 (597)
                      ..+..|+++|.   +|.|.+|++.|. ....|..|+++|++ ++||.|++|++.|.++..|.+|+++ |.+++|+.
T Consensus        10 ~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~-h~~~kp~~   84 (98)
T 2gqj_A           10 GPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMA-EHSAKPSD   84 (98)
T ss_dssp             CSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHH-HSCSCSSC
T ss_pred             CcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHH-HcCCCCCC
Confidence            33344444443   344555555555 55555555555666 6777777777777777777777776 55555543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=3.8e-14  Score=106.07  Aligned_cols=64  Identities=31%  Similarity=0.712  Sum_probs=60.1

Q ss_pred             ccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhhcccccCCccc
Q psy12199        211 YHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQ  278 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~  278 (597)
                      .+.++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+    +++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~----~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS----GEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHC----CSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcC----CCCCC
Confidence            46788999999999999999999999999999999999999999999999999999998    66654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1.7e-14  Score=108.91  Aligned_cols=66  Identities=32%  Similarity=0.601  Sum_probs=57.5

Q ss_pred             hHHHHhhccCCCcccccccccccccCchhhhhhhc-ccccc-CccccCccchhhhchHHHHHHHHhhc
Q psy12199        204 SLSIHMRYHENVREYECEICKKKFINKSTLKEHSV-SHMSV-KPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       204 ~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~-~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      .|..|+++|++++||.|++|++.|.+...|..|++ .|.++ ++|.|++|++.|.+...|..|+++++
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            35678899999999999999999999999999987 67764 88999999999999999999998876

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=5e-14  Score=106.97  Aligned_cols=57  Identities=23%  Similarity=0.392  Sum_probs=49.4

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCc
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDV  576 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~  576 (597)
                      +|.|++||+.|.+...|..|+++|++++||.|++|+++|.++..|.+|+++.|+++.
T Consensus        28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             TEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            477777778888888888888888899999999999999999999999987798764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=5.9e-14  Score=103.72  Aligned_cols=58  Identities=26%  Similarity=0.494  Sum_probs=40.8

Q ss_pred             cCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhhc
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      |+++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   61 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH   61 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHh
Confidence            5566677777777777777777777777777777777777777777777777777666

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.41  E-value=6.7e-14  Score=106.25  Aligned_cols=61  Identities=18%  Similarity=0.413  Sum_probs=43.4

Q ss_pred             hhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHH-hhc
Q psy12199        209 MRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLK-AHS  269 (597)
Q Consensus       209 ~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~  269 (597)
                      +..+.+.++|.|++|++.|.+...|.+|+++|++++||.|++|++.|.+...|.+|++ +|.
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            3445566677777777777777777777777777777777777777777777777763 453

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=9.9e-14  Score=102.49  Aligned_cols=64  Identities=22%  Similarity=0.338  Sum_probs=60.6

Q ss_pred             cccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCcc
Q psy12199        182 IHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPF  246 (597)
Q Consensus       182 ~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~  246 (597)
                      .|.++++|.|.+|++ .|.....|..|+++|+++++|.|++|++.|.+...|..|+++|++++|.
T Consensus         3 s~~~~~~~~C~~C~k-~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSY-SCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSC-EESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCCCCc-ccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            577899999999999 7999999999999999999999999999999999999999999998875

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=5.6e-14  Score=102.52  Aligned_cols=60  Identities=27%  Similarity=0.566  Sum_probs=43.9

Q ss_pred             hccCCCcccccccccccccCchhhhhhhcc-c-cccCccccCccchhhhchHHHHHHHHhhc
Q psy12199        210 RYHENVREYECEICKKKFINKSTLKEHSVS-H-MSVKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       210 ~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~-H-~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      ++|++++||.|++|++.|.+...|..|+++ | .+++||.|++|++.|.+.+.|..|+++|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            456677777777777777777777777776 5 46777777777777777777777777665

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.40  E-value=6.4e-14  Score=98.84  Aligned_cols=56  Identities=34%  Similarity=0.602  Sum_probs=38.9

Q ss_pred             CCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhhc
Q psy12199        214 NVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       214 ~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      |++||.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            35677777777777777777777777777777777777777777777777777664

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=5.2e-14  Score=106.26  Aligned_cols=59  Identities=20%  Similarity=0.463  Sum_probs=42.3

Q ss_pred             CCCCCcCccccCChHHHHHHHH-Hhhcc-ceeecCcCccccCChhHHHhhhcccCCCCccc
Q psy12199        520 NFSCDECSVECQDLNALRMHTL-REHGY-KILACEKCDVKFTHKALLAEHINTKHNTDVTL  578 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~-~h~~~-k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~  578 (597)
                      +|.|.+|++.|.+...|..|++ .|.++ +||+|++|++.|.+...|..|++++|+.+.|.
T Consensus        15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A           15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            4455555555555555555554 34554 88999999999999999999999888877763

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=1.1e-13  Score=102.82  Aligned_cols=62  Identities=32%  Similarity=0.531  Sum_probs=59.2

Q ss_pred             cccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccC
Q psy12199        182 IHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVK  244 (597)
Q Consensus       182 ~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  244 (597)
                      +|.++++|.|.+|++ .|.....|..|+++|.+++||.|++|++.|.+...|..|+++|+++.
T Consensus         8 ~H~~~k~~~C~~C~k-~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGK-AFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCC-EESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCC-ccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            789999999999999 79999999999999999999999999999999999999999998864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.39  E-value=3.1e-13  Score=95.24  Aligned_cols=55  Identities=20%  Similarity=0.555  Sum_probs=50.6

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      ||.|..|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++ |.++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS-KAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHS-SSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHH-hccc
Confidence            688999999999999999999999999999999999999999999999998 5544

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.9e-14  Score=107.47  Aligned_cols=70  Identities=23%  Similarity=0.302  Sum_probs=59.0

Q ss_pred             HHHHhhhhhcccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        173 HSLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       173 ~~l~~H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      ..|..|++ +|.++++|.|.+|++ .|.....|..       +++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~l~~H~~-~h~~~~~~~C~~C~k-~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQK-IHLGDRSQKCSKCGI-IFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCC-CCCCCSEEECSSSCC-EEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHH-HhCCCCCeeCCcccc-hhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            35677877 788888888888888 6888777766       6789999999999999999999999999999999887

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=6.1e-13  Score=94.81  Aligned_cols=57  Identities=25%  Similarity=0.507  Sum_probs=52.1

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCc
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDV  576 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~  576 (597)
                      +|.|..|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++..|+++.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            689999999999999999999999999999999999999999999999865688753

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.36  E-value=5.1e-13  Score=94.12  Aligned_cols=53  Identities=25%  Similarity=0.403  Sum_probs=48.1

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccC
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      +|.|.+|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++++|
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            68899999999999999999999999999999999999999999999999855

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=8.4e-15  Score=109.50  Aligned_cols=72  Identities=24%  Similarity=0.284  Sum_probs=67.0

Q ss_pred             ChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhhcccccCCcccCC
Q psy12199        201 NQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVVASNNKVQNC  280 (597)
Q Consensus       201 ~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~~~C  280 (597)
                      +...|..|+++|.+++||.|++|++.|.+...|..       +++|.|++|++.|.+.+.|..|+++|+    ++++|.|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~----~~~~~~C   70 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNES----GKKTSGP   70 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCC----CCCCSSC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhc----CCCCCCC
Confidence            34578899999999999999999999999999987       789999999999999999999999998    8899999


Q ss_pred             ccc
Q psy12199        281 KKC  283 (597)
Q Consensus       281 ~~C  283 (597)
                      ..|
T Consensus        71 ~~C   73 (73)
T 2ctu_A           71 SSG   73 (73)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            877

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.34  E-value=6.3e-13  Score=93.64  Aligned_cols=55  Identities=31%  Similarity=0.573  Sum_probs=30.0

Q ss_pred             ccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        188 QLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       188 ~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      ||.|.+|++ .|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|+++
T Consensus         1 p~~C~~C~~-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGI-RXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCC-BCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcC-cCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            345555555 4555555555555555555555555555555555555555555544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=5.7e-13  Score=97.08  Aligned_cols=60  Identities=22%  Similarity=0.525  Sum_probs=56.4

Q ss_pred             cccCCCccccCCCCccCCCChhhHHHHhhc-c-CCCcccccccccccccCchhhhhhhccccc
Q psy12199        182 IHVQDNQLKCTICNKENFKNQLSLSIHMRY-H-ENVREYECEICKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       182 ~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~-H-~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  242 (597)
                      +|.++++|.|..|++ .|.+...|..|++. | .+++||.|++|++.|.+...|..|+++|++
T Consensus         4 ~h~~~k~~~C~~C~k-~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSR-VYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCC-EESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcc-hhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            789999999999999 79999999999998 7 689999999999999999999999998876

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=6.2e-13  Score=99.13  Aligned_cols=66  Identities=23%  Similarity=0.601  Sum_probs=33.4

Q ss_pred             HHHhhhhhcccCCCccccC--CCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccc
Q psy12199        174 SLETHLSFIHVQDNQLKCT--ICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSH  240 (597)
Q Consensus       174 ~l~~H~~~~h~~~~~~~C~--~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H  240 (597)
                      .+..|+..+|.++++|.|+  .|++ .|.....|..|+++|.++++|.|++|++.|.+...|..|+++|
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k-~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDR-RFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCC-EESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CccchhhccCCCCCccCCcCCCCCC-ccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            3444444455555555554  3555 4555555555555555555555555555555555555555544

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=6.8e-13  Score=100.35  Aligned_cols=59  Identities=25%  Similarity=0.479  Sum_probs=47.3

Q ss_pred             ccCCCcccccccccccccCchhhhhhhccccc---cCccccCccchhhhchHHHHHHHHhhc
Q psy12199        211 YHENVREYECEICKKKFINKSTLKEHSVSHMS---VKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~---~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      .|++++||.|.+|++.|.+...|..|+++|.+   +++|.|++|++.|.....|..|++.++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            36778888888888888888888888888875   778888888888888888888885443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.8e-12  Score=96.89  Aligned_cols=63  Identities=19%  Similarity=0.415  Sum_probs=50.5

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhc---cceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHG---YKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~---~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      +|.|.+|++.|.....|..|+++|++   +++|.|++|++.|.....|.+|++.+|.+++|.....
T Consensus         7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~   72 (78)
T 2d9h_A            7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES   72 (78)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSSS
T ss_pred             CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcccc
Confidence            46666666666666777777777776   8999999999999999999999988899888766543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=2e-12  Score=96.35  Aligned_cols=53  Identities=32%  Similarity=0.843  Sum_probs=50.3

Q ss_pred             Cceecc--cccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhcC
Q psy12199        467 KPYTCE--ICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRHD  519 (597)
Q Consensus       467 k~~~C~--~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H~  519 (597)
                      ++|.|+  .|++.|.....|..|+++|+++ +|.|++|++.|.+...|..|+++|+
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            899997  5999999999999999999998 9999999999999999999999884

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=3.4e-12  Score=90.89  Aligned_cols=49  Identities=33%  Similarity=0.752  Sum_probs=24.5

Q ss_pred             ccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHH
Q psy12199        217 EYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHL  265 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~  265 (597)
                      ||.|++|++.|.+...|..|+++|++++||.|++|++.|.+.+.|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            4445555555555555555544454445555555555555555555554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=2.7e-12  Score=101.30  Aligned_cols=56  Identities=18%  Similarity=0.133  Sum_probs=29.3

Q ss_pred             ccCCcChhccCCcHHHHHHhhh-cC---C--------CCCCcCccccCChHHHHHHHHHhhccceeec
Q psy12199        496 YQCDVCFKEFRSSVTLRNHTRR-HD---N--------FSCDECSVECQDLNALRMHTLREHGYKILAC  551 (597)
Q Consensus       496 y~C~~C~~~F~~~~~L~~H~~~-H~---~--------~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C  551 (597)
                      |.|+.|++.|.+...|..|+++ |.   +        |.|.+|++.|.+...|..|+++|+|++||.|
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            4555666666555555555555 43   2        4445555555555555555544544444444

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.24  E-value=2.1e-12  Score=86.25  Aligned_cols=45  Identities=20%  Similarity=0.259  Sum_probs=36.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            477778888888888888888888888888888888888888776

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.2e-12  Score=86.15  Aligned_cols=45  Identities=24%  Similarity=0.305  Sum_probs=36.2

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888776

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.24  E-value=2.2e-12  Score=86.21  Aligned_cols=45  Identities=33%  Similarity=0.383  Sum_probs=37.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.2e-12  Score=86.22  Aligned_cols=45  Identities=24%  Similarity=0.371  Sum_probs=35.9

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888776

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.6e-12  Score=85.78  Aligned_cols=45  Identities=29%  Similarity=0.336  Sum_probs=36.6

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            377788888888888888888888888888888888888888776

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.5e-12  Score=85.96  Aligned_cols=45  Identities=18%  Similarity=0.276  Sum_probs=39.7

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578888888999999999999999999999989999999998887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.23  E-value=2.4e-12  Score=86.04  Aligned_cols=45  Identities=24%  Similarity=0.329  Sum_probs=36.6

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888776

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.3e-12  Score=86.07  Aligned_cols=45  Identities=22%  Similarity=0.277  Sum_probs=36.7

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888776

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.3e-12  Score=86.10  Aligned_cols=45  Identities=22%  Similarity=0.262  Sum_probs=34.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777776

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.4e-12  Score=86.04  Aligned_cols=45  Identities=27%  Similarity=0.359  Sum_probs=36.2

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888776

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.23  E-value=2.1e-12  Score=86.25  Aligned_cols=45  Identities=24%  Similarity=0.330  Sum_probs=33.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777766

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.8e-12  Score=85.72  Aligned_cols=45  Identities=22%  Similarity=0.188  Sum_probs=35.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777788888888888888888888777777778877776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.7e-12  Score=85.06  Aligned_cols=45  Identities=22%  Similarity=0.246  Sum_probs=36.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.9e-12  Score=85.56  Aligned_cols=45  Identities=24%  Similarity=0.299  Sum_probs=36.6

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.6e-12  Score=85.81  Aligned_cols=45  Identities=24%  Similarity=0.324  Sum_probs=36.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467778888888888888888888888888888888888888776

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.22  E-value=2.9e-12  Score=85.57  Aligned_cols=45  Identities=22%  Similarity=0.278  Sum_probs=35.6

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367777888888888888888888888888888888888888776

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.2e-12  Score=86.19  Aligned_cols=45  Identities=24%  Similarity=0.288  Sum_probs=35.0

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467777777778888888888887888888777777777777776

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2.4e-12  Score=85.06  Aligned_cols=44  Identities=25%  Similarity=0.332  Sum_probs=34.1

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56777777777777777777777777777777777777777776

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.4e-12  Score=85.26  Aligned_cols=44  Identities=20%  Similarity=0.283  Sum_probs=34.8

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      |+++|++++||.|++|++.|.+...|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777777888888888888888888888888888888887776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.9e-12  Score=85.63  Aligned_cols=45  Identities=24%  Similarity=0.315  Sum_probs=34.9

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777776

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.7e-12  Score=86.79  Aligned_cols=45  Identities=27%  Similarity=0.270  Sum_probs=34.7

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+.+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777776

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=6.2e-12  Score=99.13  Aligned_cols=61  Identities=25%  Similarity=0.271  Sum_probs=41.3

Q ss_pred             ccccCCCCccCCCChhhHHHHhhc-cCCCcc--------cccccccccccCchhhhhhhccccccCccccC
Q psy12199        188 QLKCTICNKENFKNQLSLSIHMRY-HENVRE--------YECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       188 ~~~C~~C~k~~f~~~~~L~~H~~~-H~~~k~--------~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|.|..|++ .|.....|..|+++ |.++++        |.|++|++.|.+...|..|+++|++++||.|+
T Consensus        25 ~~~C~~C~k-~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDR-TFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCC-CCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCccccccc-ccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            356677776 57777777777765 666665        66777777777777777776667666666664

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.22  E-value=3.2e-12  Score=85.38  Aligned_cols=45  Identities=24%  Similarity=0.268  Sum_probs=37.2

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.6e-12  Score=85.14  Aligned_cols=45  Identities=27%  Similarity=0.368  Sum_probs=36.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888776

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.8e-12  Score=85.64  Aligned_cols=45  Identities=31%  Similarity=0.406  Sum_probs=35.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467777778888888888888888888888888888888888776

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2.9e-12  Score=85.61  Aligned_cols=45  Identities=22%  Similarity=0.201  Sum_probs=36.5

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.8e-12  Score=84.97  Aligned_cols=44  Identities=27%  Similarity=0.296  Sum_probs=34.4

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      |+++|++++||.|++|++.|.+...|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            66777777777787787777777777778777777777777776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.2e-12  Score=85.40  Aligned_cols=45  Identities=22%  Similarity=0.256  Sum_probs=36.2

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.7e-12  Score=85.76  Aligned_cols=45  Identities=24%  Similarity=0.281  Sum_probs=34.7

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777766

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.3e-12  Score=86.05  Aligned_cols=45  Identities=27%  Similarity=0.310  Sum_probs=34.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777776

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.8e-12  Score=85.67  Aligned_cols=45  Identities=27%  Similarity=0.442  Sum_probs=33.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777766

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.4e-12  Score=85.26  Aligned_cols=45  Identities=24%  Similarity=0.365  Sum_probs=37.6

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888888888888888888888888888888888888877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.8e-12  Score=85.72  Aligned_cols=45  Identities=22%  Similarity=0.251  Sum_probs=33.2

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777766

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.1e-12  Score=86.28  Aligned_cols=45  Identities=29%  Similarity=0.343  Sum_probs=34.5

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777776

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.6e-12  Score=85.84  Aligned_cols=45  Identities=24%  Similarity=0.300  Sum_probs=34.5

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777776

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.4e-12  Score=86.04  Aligned_cols=45  Identities=24%  Similarity=0.309  Sum_probs=37.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.3e-12  Score=86.10  Aligned_cols=45  Identities=27%  Similarity=0.374  Sum_probs=34.5

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.2e-12  Score=85.40  Aligned_cols=45  Identities=22%  Similarity=0.181  Sum_probs=36.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.9e-12  Score=85.61  Aligned_cols=45  Identities=22%  Similarity=0.333  Sum_probs=34.8

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777776

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4e-12  Score=84.93  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=36.6

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888776

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.2e-12  Score=84.77  Aligned_cols=45  Identities=24%  Similarity=0.321  Sum_probs=36.0

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888765

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.19  E-value=4.8e-12  Score=84.51  Aligned_cols=45  Identities=27%  Similarity=0.314  Sum_probs=36.0

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888776

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.9e-12  Score=84.93  Aligned_cols=44  Identities=23%  Similarity=0.303  Sum_probs=41.4

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||+|++|++.|.++..|.+|+++ |++++||+|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGG-TSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            67889999999999999999999999999998 999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=4.9e-12  Score=84.48  Aligned_cols=45  Identities=24%  Similarity=0.292  Sum_probs=34.9

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            366777777778888888888888888888777777777877776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4e-12  Score=84.88  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=33.5

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      |+++|++++||.|++|++.|.+...|.+|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66777777777777777777777777777777777777777766

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.5e-12  Score=85.20  Aligned_cols=45  Identities=27%  Similarity=0.349  Sum_probs=35.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777788888888888888888888777877778877776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.8e-12  Score=85.03  Aligned_cols=45  Identities=20%  Similarity=0.299  Sum_probs=41.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTT-TCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhh-cCCCCCCCCCCC
Confidence            367889999999999999999999999999998 999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=5.1e-12  Score=84.38  Aligned_cols=45  Identities=22%  Similarity=0.237  Sum_probs=34.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366777777777777777777777777777777777777777776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.18  E-value=3.8e-12  Score=85.03  Aligned_cols=45  Identities=22%  Similarity=0.274  Sum_probs=41.1

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNV-HVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGG-GSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHH-cCCCCCcCCCCC
Confidence            367788999999999999999999999999988 999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.18  E-value=4.2e-12  Score=84.83  Aligned_cols=45  Identities=20%  Similarity=0.228  Sum_probs=41.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.+.+.|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRS-HTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGG-SSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            367789999999999999999999999999998 999999999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.2e-12  Score=84.79  Aligned_cols=45  Identities=22%  Similarity=0.280  Sum_probs=41.1

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGG-TSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhh-cCCCCCCCCCCC
Confidence            367788999999999999999999999999988 999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.6e-12  Score=84.60  Aligned_cols=45  Identities=20%  Similarity=0.226  Sum_probs=41.7

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.++..|..|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTT-TCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            367789999999999999999999999999998 999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.9e-12  Score=84.94  Aligned_cols=45  Identities=20%  Similarity=0.256  Sum_probs=41.3

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI-HSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGG-GSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHH-hcCCCCCCCCCC
Confidence            367788999999999999999999999999998 899999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.9e-12  Score=84.46  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=41.0

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRT-HSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTT-TCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            67788999999999999999999999999998 999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=3.9e-12  Score=84.98  Aligned_cols=45  Identities=18%  Similarity=0.282  Sum_probs=40.3

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERL-HSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHH-CCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHh-cCCCCCCCCCCC
Confidence            367788899999999999999999999999988 889999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=3e-12  Score=84.61  Aligned_cols=44  Identities=23%  Similarity=0.322  Sum_probs=39.7

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQT-HAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHH-HTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            56778899999999999999999999999988 889999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=4.8e-12  Score=84.53  Aligned_cols=44  Identities=20%  Similarity=0.209  Sum_probs=41.2

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||+|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGG-GTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            67788999999999999999999999999998 999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=4.6e-12  Score=84.61  Aligned_cols=45  Identities=20%  Similarity=0.216  Sum_probs=41.6

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTT-TSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            467788999999999999999999999999988 999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.6e-12  Score=84.61  Aligned_cols=44  Identities=18%  Similarity=0.226  Sum_probs=40.5

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTT-TTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            67788999999999999999999999999987 899999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.6e-12  Score=84.20  Aligned_cols=45  Identities=20%  Similarity=0.213  Sum_probs=41.5

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGG-GCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            477889999999999999999999999999987 999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.1e-12  Score=84.40  Aligned_cols=45  Identities=22%  Similarity=0.243  Sum_probs=41.4

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.++..|..|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHT-TSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            477788999999999999999999999999997 999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.2e-12  Score=83.56  Aligned_cols=45  Identities=27%  Similarity=0.321  Sum_probs=35.0

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhc-cccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSV-SHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~~~C~~C  251 (597)
                      .|+++|++++||.|++|++.|.....|..|++ +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36777777778888888888888888888877 7777778887776

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=7.7e-12  Score=90.89  Aligned_cols=54  Identities=28%  Similarity=0.520  Sum_probs=33.4

Q ss_pred             CCcccccccccccccCchhhhhhhccccccCccccC-ccchhhhchHHHHHHHHhhc
Q psy12199        214 NVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE-ICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       214 ~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~-~C~~~f~~~~~L~~H~~~H~  269 (597)
                      +++||.|++|++.|. ...|..|+++ ++++||.|+ .||+.|...+.|..|+++|.
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            455666666666666 6666666665 566666666 66666666666666666554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.4e-12  Score=84.68  Aligned_cols=44  Identities=18%  Similarity=0.160  Sum_probs=40.1

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV-HMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGG-GGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            66788899999999999999999999999987 889999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.16  E-value=5.2e-12  Score=84.35  Aligned_cols=45  Identities=18%  Similarity=0.241  Sum_probs=41.5

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGG-GTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            367789999999999999999999999999998 999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.5e-12  Score=84.20  Aligned_cols=45  Identities=20%  Similarity=0.241  Sum_probs=41.2

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKI-HTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHH-TSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            477889999999999999999999999999988 899999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.5e-12  Score=84.22  Aligned_cols=45  Identities=22%  Similarity=0.328  Sum_probs=41.9

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGG-GSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            477889999999999999999999999999998 999999999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.6e-12  Score=84.16  Aligned_cols=44  Identities=18%  Similarity=0.184  Sum_probs=33.3

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56677777777777777777777777777777777777777766

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.5e-12  Score=84.65  Aligned_cols=45  Identities=16%  Similarity=0.273  Sum_probs=42.0

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.++..|..|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGG-GSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            467889999999999999999999999999998 999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.16  E-value=5e-12  Score=84.44  Aligned_cols=45  Identities=18%  Similarity=0.274  Sum_probs=41.0

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTG-GGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            367788999999999999999999999999998 889999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.3e-12  Score=84.75  Aligned_cols=45  Identities=22%  Similarity=0.241  Sum_probs=40.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRI-HTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGG-GSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            367788999999999999999999999999988 889999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5.2e-12  Score=84.36  Aligned_cols=45  Identities=18%  Similarity=0.218  Sum_probs=41.0

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRI-HTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTT-TTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            367788999999999999999999999999988 899999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.16  E-value=1.4e-11  Score=85.39  Aligned_cols=48  Identities=23%  Similarity=0.311  Sum_probs=43.0

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCCCcceee
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLI  589 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~  589 (597)
                      .|.+++||.|++|++.|.+...|.+|++..|.+++||+|++||+.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            367889999999999999999999999734999999999999999975

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.16  E-value=9.7e-13  Score=94.15  Aligned_cols=55  Identities=16%  Similarity=0.292  Sum_probs=47.9

Q ss_pred             HHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCCCcceeeceEEE
Q psy12199        536 LRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNVVVLIEEVIF  594 (597)
Q Consensus       536 L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~~~f~~~~~l~  594 (597)
                      |..|+++|+|++||.|+.|++.|.....|.   +. |++++||+|++||+.|...+.+.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~-H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LF-DPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HE-ETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hh-cCCCCCEECCCCCCccccCcccc
Confidence            446788899999999999999999998887   55 99999999999999999877654

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=5.4e-12  Score=84.27  Aligned_cols=45  Identities=18%  Similarity=0.182  Sum_probs=41.6

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.+...|..|+++ |++++||+|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRV-HMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTT-TCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            367789999999999999999999999999988 999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=5e-12  Score=84.43  Aligned_cols=44  Identities=23%  Similarity=0.247  Sum_probs=41.4

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||+|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKV-HTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTT-SCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHh-hCCCCCCCCCCC
Confidence            67789999999999999999999999999998 999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3.9e-12  Score=84.99  Aligned_cols=45  Identities=18%  Similarity=0.242  Sum_probs=40.5

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHH-HSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            367788899999999999999999999999988 889999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=4.7e-12  Score=84.53  Aligned_cols=45  Identities=18%  Similarity=0.245  Sum_probs=39.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV-HTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHH-TTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            367788899999999999999999999999887 888999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.1e-12  Score=84.41  Aligned_cols=45  Identities=20%  Similarity=0.274  Sum_probs=40.6

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTT-TTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            367788899999999999999999999999988 889999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.15  E-value=4.2e-12  Score=84.76  Aligned_cols=45  Identities=18%  Similarity=0.268  Sum_probs=38.3

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      +|+++|++++||.|++|++.|.++..|.+|+++ |++++||+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRV-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHH-HSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            366778888889999999999999999999887 888888988887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=4.4e-12  Score=84.71  Aligned_cols=45  Identities=20%  Similarity=0.245  Sum_probs=39.9

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.++..|..|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRT-HAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHH-HTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHH-cCCCCCCCCCCC
Confidence            367788899999999999999999999999988 888999999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=5.3e-12  Score=84.29  Aligned_cols=45  Identities=24%  Similarity=0.234  Sum_probs=41.2

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRT-HVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHH-CCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            467788999999999999999999999999988 999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.15  E-value=4e-12  Score=84.91  Aligned_cols=44  Identities=18%  Similarity=0.260  Sum_probs=38.9

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKL-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHH-HSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            66778899999999999999999999999987 888899999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=6.4e-12  Score=83.90  Aligned_cols=44  Identities=18%  Similarity=0.235  Sum_probs=40.7

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.+...|..|+++ |++++||+|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRS-HSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHH-SCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            67788999999999999999999999999988 999999999988

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.3e-11  Score=89.58  Aligned_cols=60  Identities=17%  Similarity=0.233  Sum_probs=55.3

Q ss_pred             ccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccc-cccccccCchhhhhhhccccccCc
Q psy12199        183 HVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECE-ICKKKFINKSTLKEHSVSHMSVKP  245 (597)
Q Consensus       183 h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~-~C~~~F~~~~~L~~H~~~H~~~~~  245 (597)
                      .-++++|.|.+|++ .|. ...|..|+++ ++++||.|+ .|++.|...+.|..|+++|...+|
T Consensus         5 ~C~~~~~~C~~C~k-~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTK-EFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCC-EEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCC-ccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45678999999999 799 9999999999 999999999 999999999999999999987765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1e-11  Score=82.89  Aligned_cols=45  Identities=20%  Similarity=0.249  Sum_probs=33.9

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366777777777777777777777777777777777777777764

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5e-12  Score=84.42  Aligned_cols=45  Identities=22%  Similarity=0.237  Sum_probs=38.2

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC-HTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHH-HSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            366778888888998899999888889889887 888888888887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.1e-12  Score=84.39  Aligned_cols=45  Identities=20%  Similarity=0.211  Sum_probs=39.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||+|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI-HTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHH-HTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHH-cCCCCCCCCCCC
Confidence            367788899999999999999999999999987 888999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.14  E-value=8e-12  Score=83.38  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=40.8

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||+|++|++.|.++..|..|+++ |++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM-HTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGG-GCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            56788999999999999999999999999998 999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=5.2e-12  Score=84.34  Aligned_cols=45  Identities=20%  Similarity=0.271  Sum_probs=39.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHH-HSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHH-HCCCCCCCCCCC
Confidence            367788899999999999999999999999987 888999999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=8.7e-12  Score=83.22  Aligned_cols=45  Identities=20%  Similarity=0.245  Sum_probs=41.2

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTT-TTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            367889999999999999999999999999998 999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4e-12  Score=84.88  Aligned_cols=45  Identities=18%  Similarity=0.300  Sum_probs=38.9

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|+|++||.|++|++.|.+.+.|..|+++ |++++||+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKR-HFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHH-HHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHH-HcCCCCCCCCCC
Confidence            467778888999999999999999999999887 888889999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.3e-12  Score=84.72  Aligned_cols=45  Identities=18%  Similarity=0.208  Sum_probs=38.2

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.....|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHH-HHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            366778888888888888888888888888887 888888888887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.1e-12  Score=84.85  Aligned_cols=44  Identities=23%  Similarity=0.277  Sum_probs=39.2

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRV-HTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHH-HHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            66778899999999999999999999999987 888899999887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9e-12  Score=83.61  Aligned_cols=44  Identities=18%  Similarity=0.224  Sum_probs=40.8

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhc-ccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHIN-TKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~-~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.+...|.+|++ + |++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~-H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYY-HTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTT-TTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhh-cCCCCCCCCCCC
Confidence            6778899999999999999999999999999 6 999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.6e-12  Score=84.62  Aligned_cols=45  Identities=18%  Similarity=0.239  Sum_probs=38.5

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      .|+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHH-HHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHh-cCCCCCCCCCCC
Confidence            366778888999999999999999999999887 888889998887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.8e-12  Score=84.10  Aligned_cols=44  Identities=23%  Similarity=0.373  Sum_probs=39.9

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.+...|..|+++ |++++||+|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRT-HTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHH-HSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHH-cCCCCCCCCCCC
Confidence            66788899999999999999999999999988 889999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=7.2e-12  Score=83.64  Aligned_cols=44  Identities=18%  Similarity=0.102  Sum_probs=39.4

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.+...|..|+++ |++++||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVL-HMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHH-HSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            66788899999999999999999999999988 888999999887

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2e-11  Score=81.47  Aligned_cols=44  Identities=25%  Similarity=0.316  Sum_probs=33.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            46777777777777777777777777777777777777777753

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.11  E-value=2.1e-11  Score=79.56  Aligned_cols=42  Identities=24%  Similarity=0.309  Sum_probs=32.0

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            566777777777777777777777777777777777777774

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.3e-11  Score=81.14  Aligned_cols=44  Identities=25%  Similarity=0.390  Sum_probs=34.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      +|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46777777888888888888888888888888888888887753

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=81.31  Aligned_cols=44  Identities=25%  Similarity=0.336  Sum_probs=33.8

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46777777777888888888888788888877777777777753

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.6e-12  Score=84.13  Aligned_cols=44  Identities=16%  Similarity=0.182  Sum_probs=34.0

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||+|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL-HTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHH-HHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            55667777888888888888888888888777 777778888776

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=81.54  Aligned_cols=44  Identities=34%  Similarity=0.387  Sum_probs=34.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46777777788888888888888888888888888888887763

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.11  E-value=4e-12  Score=90.91  Aligned_cols=53  Identities=15%  Similarity=0.427  Sum_probs=35.8

Q ss_pred             HHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHH
Q psy12199        205 LSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASR  260 (597)
Q Consensus       205 L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~  260 (597)
                      |..|+++|++++||.|++||+.|.....|.   ++|++++||.|++||+.|....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            445666777777777777777777666665   56777777777777777765543

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.3e-11  Score=81.11  Aligned_cols=44  Identities=30%  Similarity=0.385  Sum_probs=32.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46677777777777777777777777777777777777777753

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.10  E-value=1.6e-11  Score=81.86  Aligned_cols=44  Identities=25%  Similarity=0.301  Sum_probs=32.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46677777777777777777777777777777777777777753

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.2e-11  Score=81.17  Aligned_cols=44  Identities=25%  Similarity=0.326  Sum_probs=32.7

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            46677777777777777777777777777777777777777753

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.4e-11  Score=81.06  Aligned_cols=44  Identities=30%  Similarity=0.381  Sum_probs=34.9

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            46777888888888888888888888888888888888888764

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.5e-11  Score=80.89  Aligned_cols=44  Identities=25%  Similarity=0.387  Sum_probs=33.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46777777777777777777777777777777777777777753

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7.6e-12  Score=83.51  Aligned_cols=44  Identities=16%  Similarity=0.165  Sum_probs=37.7

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.++..|.+|+++ |++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRV-HTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHH-HHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHH-HcCCCCCCCCCC
Confidence            56678888889998899999888889999887 888888888887

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.1e-11  Score=80.43  Aligned_cols=43  Identities=23%  Similarity=0.380  Sum_probs=33.8

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            6677778888888888888888888888888888888887763

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=2.2e-11  Score=81.18  Aligned_cols=44  Identities=34%  Similarity=0.365  Sum_probs=32.6

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36677777777777777777777777777777777777777753

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.6e-11  Score=80.89  Aligned_cols=43  Identities=28%  Similarity=0.395  Sum_probs=32.8

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677777777777777777777777777777777777777775

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3e-11  Score=80.57  Aligned_cols=44  Identities=20%  Similarity=0.250  Sum_probs=32.9

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677777777777777777777777777777777777777753

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.8e-11  Score=78.89  Aligned_cols=41  Identities=24%  Similarity=0.389  Sum_probs=34.0

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCcccc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC  248 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  248 (597)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67788888888888888888888888888888888888876

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.4e-11  Score=81.08  Aligned_cols=44  Identities=27%  Similarity=0.361  Sum_probs=33.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46777777777777777777777777777777777777777753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2e-11  Score=81.41  Aligned_cols=44  Identities=25%  Similarity=0.366  Sum_probs=32.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            46677777777777777777777777777777777777777753

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.1e-11  Score=80.47  Aligned_cols=44  Identities=36%  Similarity=0.434  Sum_probs=33.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            36777777777777777777777777777777777777777753

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.8e-11  Score=78.88  Aligned_cols=42  Identities=19%  Similarity=0.313  Sum_probs=29.6

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677777777777777777777777777777777777663

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.1e-11  Score=80.51  Aligned_cols=43  Identities=26%  Similarity=0.387  Sum_probs=33.6

Q ss_pred             hhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        209 MRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       209 ~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5667777788888888888888888888888888888887776

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-11  Score=81.29  Aligned_cols=44  Identities=27%  Similarity=0.468  Sum_probs=31.6

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46667777777777777777777777777777777777777753

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.8e-11  Score=80.74  Aligned_cols=44  Identities=25%  Similarity=0.357  Sum_probs=34.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46777777788888888888888888888888888888887753

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=3e-11  Score=83.65  Aligned_cols=45  Identities=29%  Similarity=0.459  Sum_probs=25.8

Q ss_pred             cCCCcccccccccccccCchhhhhhhc-cccccCccccCccchhhh
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSV-SHMSVKPFKCEICGHYLS  256 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~  256 (597)
                      |.+++||.|++|++.|.....|.+|++ +|.+++||.|++|++.|.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            445555555555555555555555554 555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.1e-11  Score=79.65  Aligned_cols=43  Identities=23%  Similarity=0.289  Sum_probs=32.2

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4667777777777777777777777777777777777777774

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.5e-11  Score=82.04  Aligned_cols=44  Identities=20%  Similarity=0.323  Sum_probs=39.2

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHH-HCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            66788899999999999999999999999988 888999999875

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.2e-11  Score=79.53  Aligned_cols=43  Identities=23%  Similarity=0.262  Sum_probs=33.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3677777777788888888888888888887777777777774

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.07  E-value=3.5e-11  Score=89.15  Aligned_cols=56  Identities=32%  Similarity=0.698  Sum_probs=31.0

Q ss_pred             CCCccccccc--ccccccCchhhhhhhccccccCccccCc--cchhhhchHHHHHHHHhh
Q psy12199        213 ENVREYECEI--CKKKFINKSTLKEHSVSHMSVKPFKCEI--CGHYLSRASRLRAHLKAH  268 (597)
Q Consensus       213 ~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H  268 (597)
                      .+.++|.|..  |++.|.....|..|+++|++++||.|++  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3445555555  5555555555555555555555555543  555555555555555443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3e-11  Score=80.53  Aligned_cols=44  Identities=25%  Similarity=0.344  Sum_probs=31.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36667777777777777777777777777777777777777753

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.1e-11  Score=80.49  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=33.3

Q ss_pred             hhccCCCcccccccccccccCchhhhhhhccccccCccccCcc
Q psy12199        209 MRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       209 ~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      +++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567777778888888888888888888777777777877776

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.9e-11  Score=80.00  Aligned_cols=42  Identities=24%  Similarity=0.416  Sum_probs=30.4

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      |+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777777777777777777777777777777777777765

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.5e-11  Score=80.91  Aligned_cols=43  Identities=19%  Similarity=0.299  Sum_probs=31.9

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4667777777777777777777777777777777777777775

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=3.3e-11  Score=79.45  Aligned_cols=43  Identities=14%  Similarity=0.267  Sum_probs=32.8

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4677777777777777777777777777777777777777774

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=4.6e-11  Score=77.83  Aligned_cols=41  Identities=29%  Similarity=0.451  Sum_probs=32.0

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCcccc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC  248 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  248 (597)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56777777788888888888888888888777877777776

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.2e-11  Score=79.55  Aligned_cols=43  Identities=26%  Similarity=0.339  Sum_probs=31.1

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4666777777777777777777777777777777777777764

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=4.2e-11  Score=78.95  Aligned_cols=43  Identities=19%  Similarity=0.302  Sum_probs=34.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4777788888888888888888888888888888888888774

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3e-11  Score=80.57  Aligned_cols=43  Identities=26%  Similarity=0.313  Sum_probs=30.6

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4666777777777777777777777777777777777777765

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3e-11  Score=80.54  Aligned_cols=44  Identities=32%  Similarity=0.443  Sum_probs=32.2

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36677777777777777777777777777777777777777753

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=4.7e-11  Score=79.55  Aligned_cols=44  Identities=20%  Similarity=0.274  Sum_probs=35.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccc-cCccccCc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMS-VKPFKCEI  250 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~-~~~~~C~~  250 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++ ++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367778888888888888888888888888888888 88888763

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.06  E-value=2.7e-11  Score=78.96  Aligned_cols=42  Identities=21%  Similarity=0.345  Sum_probs=38.5

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      |+++|++++||+|++|++.|.+...|.+|+++ |++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRT-HAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGG-GCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHh-cCCCCCCCCC
Confidence            56788999999999999999999999999998 9999999985

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.2e-11  Score=78.98  Aligned_cols=42  Identities=26%  Similarity=0.515  Sum_probs=34.2

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      |+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            667788888888888888888888888888888888888875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.06  E-value=1e-10  Score=86.64  Aligned_cols=53  Identities=34%  Similarity=0.661  Sum_probs=49.8

Q ss_pred             CCceeccc--ccccccchhhHHHHHHhccCc-cccCCc--ChhccCCcHHHHHHhhhc
Q psy12199        466 MKPYTCEI--CSKTYTVEGSLLTHYDMHSGE-FYQCDV--CFKEFRSSVTLRNHTRRH  518 (597)
Q Consensus       466 ~k~~~C~~--C~~~f~~~~~L~~H~~~H~~e-~y~C~~--C~~~F~~~~~L~~H~~~H  518 (597)
                      .++|.|..  |++.|.....|..|+++|+++ ||.|++  |++.|.....|..|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            47899998  999999999999999999998 999975  999999999999999886

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=4.9e-11  Score=79.04  Aligned_cols=42  Identities=21%  Similarity=0.336  Sum_probs=28.6

Q ss_pred             ccCCCcccccccccccccCchhhhhhhccccccCccccCccc
Q psy12199        211 YHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICG  252 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~  252 (597)
                      .|++++||.|++|++.|.....|..|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            466666666766776676666677776666666667666664

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.5e-11  Score=79.69  Aligned_cols=43  Identities=28%  Similarity=0.410  Sum_probs=33.3

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677777777788888888888777788887777777777775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.5e-11  Score=80.23  Aligned_cols=44  Identities=18%  Similarity=0.268  Sum_probs=40.1

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||+|++|++.|.++..|..|+++ |++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTT-TSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            367789999999999999999999999999998 99999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=7e-11  Score=79.50  Aligned_cols=42  Identities=29%  Similarity=0.513  Sum_probs=31.1

Q ss_pred             cCCCcccccccccccccCchhhhhhhccccccCccccCccch
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGH  253 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~  253 (597)
                      |.++++|.|++|++.|.+...|..|+++|++++||.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            556677777777777777777777777777777777777764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=9.5e-11  Score=78.84  Aligned_cols=42  Identities=21%  Similarity=0.260  Sum_probs=39.1

Q ss_pred             hhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCCCc
Q psy12199        543 EHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCNV  585 (597)
Q Consensus       543 h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~~  585 (597)
                      |.+++||.|++|++.|.+...|.+|+++ |++++||+|++||+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLS-HSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGG-SCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHh-cCCCCCccCCCCCC
Confidence            5688999999999999999999999998 99999999999986

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.2e-11  Score=79.84  Aligned_cols=43  Identities=19%  Similarity=0.217  Sum_probs=39.8

Q ss_pred             HHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        540 TLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       540 ~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      +++|++++||.|++|++.|.+...|.+|+++ |++++||+|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI-HTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTT-TSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHH-hCCCCCCCCCCC
Confidence            4578899999999999999999999999998 999999999988

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.8e-11  Score=80.02  Aligned_cols=44  Identities=20%  Similarity=0.280  Sum_probs=39.3

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||+|++|++.|.+...|.+|+++ |++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTT-TTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHh-hCCCCCCCCCC
Confidence            367788899999999999999999999999987 89999999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.5e-11  Score=80.18  Aligned_cols=43  Identities=23%  Similarity=0.247  Sum_probs=31.4

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667777777777777777777777777777777777777775

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.4e-11  Score=79.67  Aligned_cols=43  Identities=19%  Similarity=0.261  Sum_probs=39.5

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      |+++|++++||+|++|++.|.+...|.+|+++ |++++||+|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV-HSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTT-TTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHh-cCCCCCCCCCC
Confidence            56788999999999999999999999999988 99999999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.3e-11  Score=77.98  Aligned_cols=41  Identities=22%  Similarity=0.485  Sum_probs=30.9

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCcccc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC  248 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  248 (597)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56677777777777777777777777777777777777766

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.6e-11  Score=79.63  Aligned_cols=44  Identities=20%  Similarity=0.281  Sum_probs=40.1

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGG-TSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHh-cCCCCCcCCCC
Confidence            367789999999999999999999999999988 99999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.4e-11  Score=79.72  Aligned_cols=44  Identities=23%  Similarity=0.350  Sum_probs=39.4

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGG-GTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHh-cCCCCCCCCCC
Confidence            367788899999999999999999999999988 89999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.02  E-value=3.4e-11  Score=83.37  Aligned_cols=49  Identities=16%  Similarity=0.156  Sum_probs=33.9

Q ss_pred             CCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCcc
Q psy12199        198 NFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPF  246 (597)
Q Consensus       198 ~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~  246 (597)
                      .|.....|..|+++|++++||.|++|++.|.....|..|+++|++++||
T Consensus         5 ~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            5 RAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            4666666667777777777777777777777777777777777766665

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.2e-11  Score=79.81  Aligned_cols=44  Identities=20%  Similarity=0.292  Sum_probs=39.2

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.++..|.+|+++ |++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRV-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGG-GCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            367788899999999999999999999999988 88999999974

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.02  E-value=6.1e-11  Score=77.27  Aligned_cols=41  Identities=22%  Similarity=0.310  Sum_probs=29.7

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCcccc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC  248 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  248 (597)
                      |+++|++++||.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56667777777777777777777777777777777777766

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.6e-11  Score=79.65  Aligned_cols=44  Identities=23%  Similarity=0.294  Sum_probs=39.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++ |++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRT-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHT-SCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            367788999999999999999999999999998 99999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=6.1e-11  Score=78.58  Aligned_cols=42  Identities=21%  Similarity=0.434  Sum_probs=38.3

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCCC
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLCN  584 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C~  584 (597)
                      .|++++||+|++|++.|..+..|..|+++ |++++||.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHH-HSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHH-ccCCCCCCCcCCC
Confidence            57889999999999999999999999988 8899999999997

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.8e-11  Score=79.54  Aligned_cols=44  Identities=18%  Similarity=0.286  Sum_probs=39.3

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||+|++|++.|.+...|.+|+++ |++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTT-TSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            367788999999999999999999999999987 89999999974

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5e-11  Score=78.57  Aligned_cols=43  Identities=19%  Similarity=0.257  Sum_probs=35.5

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4777888888888888888888888888888888888888873

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.02  E-value=3.1e-11  Score=80.47  Aligned_cols=44  Identities=20%  Similarity=0.285  Sum_probs=38.6

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHH-HTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            367788899999999999999999999999988 88899999874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=3.2e-11  Score=80.41  Aligned_cols=43  Identities=19%  Similarity=0.255  Sum_probs=38.1

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      |+++|++++||+|++|++.|.+...|.+|+++ |++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRS-HTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHH-HSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHh-cCCCCCCCCCC
Confidence            67788899999999999999999999999987 88899999874

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.1e-11  Score=79.86  Aligned_cols=43  Identities=19%  Similarity=0.254  Sum_probs=32.8

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677777777777777777777777777777777777777775

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.1e-11  Score=79.42  Aligned_cols=44  Identities=18%  Similarity=0.277  Sum_probs=39.6

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRI-HRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGG-GCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhH-hCCCCCCCCCC
Confidence            367788999999999999999999999999998 89999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.4e-11  Score=78.87  Aligned_cols=43  Identities=21%  Similarity=0.292  Sum_probs=39.4

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++ |++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKT-HSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTT-SSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHH-cCCCCCCCCC
Confidence            367889999999999999999999999999998 9999999985

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.8e-11  Score=79.52  Aligned_cols=43  Identities=23%  Similarity=0.302  Sum_probs=38.9

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      |+++|++++||.|++|++.|.++..|.+|+++ |++++||+|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKI-HTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTT-TSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            67788899999999999999999999999988 89999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.3e-11  Score=79.75  Aligned_cols=43  Identities=23%  Similarity=0.315  Sum_probs=38.7

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      |+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTT-TSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHh-cCCCCCCCCCC
Confidence            67788899999999999999999999999987 89999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=4.7e-11  Score=77.81  Aligned_cols=42  Identities=19%  Similarity=0.355  Sum_probs=37.2

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      |+++|++++||.|++|++.|.+...|.+|+++ |++++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKM-HTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHH-TSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            56678899999999999999999999999988 8899999884

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5e-11  Score=77.70  Aligned_cols=41  Identities=24%  Similarity=0.377  Sum_probs=38.4

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCccccc
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKC  580 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C  580 (597)
                      |+++|+|++||.|++|++.|.+...|..|+++ |++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV-HTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGG-TSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHH-hCCCCCCCC
Confidence            67789999999999999999999999999998 999999988

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.01  E-value=3.2e-11  Score=83.52  Aligned_cols=52  Identities=10%  Similarity=0.093  Sum_probs=46.4

Q ss_pred             ccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccc
Q psy12199        527 SVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLK  579 (597)
Q Consensus       527 ~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~  579 (597)
                      ++.|.....|..|+++|+|++||.|++|++.|.....|..|+++ |++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLEL-RHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHH-HTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHH-hccCCCCC
Confidence            46788888889999999999999999999999999999999998 88898874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3.9e-11  Score=79.98  Aligned_cols=44  Identities=23%  Similarity=0.286  Sum_probs=38.7

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQAT-HSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHH-HCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHH-cCCCCCCCCCC
Confidence            367788899999999999999999999999987 88999999874

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.2e-11  Score=79.39  Aligned_cols=44  Identities=20%  Similarity=0.253  Sum_probs=38.4

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.++..|..|+++ |++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRI-HTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGG-GSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            367788899999999999999999999999987 88899999874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.5e-11  Score=79.24  Aligned_cols=44  Identities=18%  Similarity=0.228  Sum_probs=39.4

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.....|..|+++ |++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTT-TCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            367788999999999999999999999999987 89999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.9e-11  Score=79.11  Aligned_cols=44  Identities=23%  Similarity=0.297  Sum_probs=39.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.....|.+|+++ |++++||+|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTT-TSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            367788999999999999999999999999988 99999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.6e-11  Score=78.35  Aligned_cols=43  Identities=23%  Similarity=0.363  Sum_probs=38.7

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++ |++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRT-HTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTT-TCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhh-cCCCCCCCCC
Confidence            367788999999999999999999999999987 8999999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5e-11  Score=79.43  Aligned_cols=43  Identities=19%  Similarity=0.289  Sum_probs=38.2

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      |+++|++++||+|++|++.|.+...|.+|+++ |++++||+|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRV-HTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHH-CSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            66788899999999999999999999999988 88999999863

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=5.9e-11  Score=77.33  Aligned_cols=41  Identities=24%  Similarity=0.390  Sum_probs=38.0

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCccccc
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKC  580 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C  580 (597)
                      |+++|++++||+|++|++.|.+...|..|+++ |++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-HTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTT-TSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHh-cCCCCCCCC
Confidence            56788999999999999999999999999998 999999988

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.4e-11  Score=79.74  Aligned_cols=44  Identities=30%  Similarity=0.361  Sum_probs=38.4

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHH-HCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            367788899999999999999999999999988 88899999874

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.7e-11  Score=78.32  Aligned_cols=43  Identities=23%  Similarity=0.327  Sum_probs=38.6

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++ |++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRT-HTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHH-TTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHH-hCCCCCCCCC
Confidence            367788999999999999999999999999988 8999999985

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=9.5e-11  Score=77.19  Aligned_cols=42  Identities=24%  Similarity=0.229  Sum_probs=29.1

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            556666677777777777777777777777777777777663

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=6.5e-11  Score=78.87  Aligned_cols=43  Identities=19%  Similarity=0.274  Sum_probs=39.6

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCC-CcccccCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNT-DVTLKCQL  582 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~-~~~~~C~~  582 (597)
                      |+++|++++||.|++|++.|.+...|..|+++ |++ ++||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERI-HTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTT-CCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            67788999999999999999999999999988 888 99999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=8e-11  Score=78.41  Aligned_cols=43  Identities=23%  Similarity=0.359  Sum_probs=39.1

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      |+++|++++||.|++|++.|.++..|.+|+++ |++++||+|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRV-HSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGG-SCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            56778999999999999999999999999998 99999999973

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=6.5e-11  Score=78.01  Aligned_cols=43  Identities=26%  Similarity=0.391  Sum_probs=38.9

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      .|+++|++++||+|++|++.|.+...|..|+++ |++++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERT-HARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHH-CCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHh-cCCCCCCCCC
Confidence            367788999999999999999999999999998 9999999984

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=7.8e-11  Score=77.63  Aligned_cols=43  Identities=23%  Similarity=0.354  Sum_probs=39.4

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      .|+++|++++||.|++|++.|.....|..|+++ |++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKT-HAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGG-GCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHH-cCCCCCcCCC
Confidence            467789999999999999999999999999998 9999999985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5.3e-11  Score=79.32  Aligned_cols=44  Identities=23%  Similarity=0.260  Sum_probs=38.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      +|+++|++++||+|++|++.|.++..|.+|+++ |++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS-HTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHH-HTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHH-cCCCCCCCCCC
Confidence            367788899999999999999999999999988 88999999873

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.6e-10  Score=76.05  Aligned_cols=42  Identities=31%  Similarity=0.377  Sum_probs=31.0

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhccccccCcccc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC  248 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  248 (597)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            366777777777777777777777777777777777777765

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5e-11  Score=79.42  Aligned_cols=44  Identities=20%  Similarity=0.302  Sum_probs=38.6

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.+...|.+|+++ |++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV-HTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHH-HSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            367788899999999999999999999999988 88899999873

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4.6e-11  Score=79.62  Aligned_cols=43  Identities=26%  Similarity=0.367  Sum_probs=36.4

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      |+++|++++||.|++|++.|.+...|.+|+++ |++++||+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI-HTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHH-HHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHh-cCCCCCCCCCC
Confidence            66778888888888888888888888888887 88888888864

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.9e-11  Score=78.47  Aligned_cols=44  Identities=18%  Similarity=0.258  Sum_probs=39.8

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .|+++|++++||.|++|++.|.....|.+|+++ |++++||+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-HTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTT-SCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHH-hCCCCCCCCCC
Confidence            367788999999999999999999999999998 99999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6.5e-11  Score=78.86  Aligned_cols=43  Identities=21%  Similarity=0.354  Sum_probs=35.9

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      |+++|++++||.|++|++.|.+...|..|+++ |++++||+|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHH-HTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHH-cCCCCCCCCCC
Confidence            56678888888888888888888888888887 88888888864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.97  E-value=8.1e-11  Score=76.66  Aligned_cols=41  Identities=20%  Similarity=0.270  Sum_probs=37.1

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCccccc
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKC  580 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C  580 (597)
                      |+++|++++||.|++|++.|.++..|..|+++ |++++||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-CSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHH-TTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhh-cCCCCCCCC
Confidence            56778899999999999999999999999988 999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=77.49  Aligned_cols=44  Identities=23%  Similarity=0.305  Sum_probs=33.9

Q ss_pred             HhhccCCCcccccc--cccccccCchhhhhhhccccccCccccCcc
Q psy12199        208 HMRYHENVREYECE--ICKKKFINKSTLKEHSVSHMSVKPFKCEIC  251 (597)
Q Consensus       208 H~~~H~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C  251 (597)
                      |.++|++++||.|.  +|++.|.....|..|+++|++++||.|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45667777788886  788888888888888877877788887776

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.8e-11  Score=79.52  Aligned_cols=42  Identities=21%  Similarity=0.277  Sum_probs=33.3

Q ss_pred             HHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        541 LREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       541 ~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      ++|++++||.|++|++.|.+...|..|+++ |++++||+|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWIT-HTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTH-HHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence            457778888888888888888888888877 777788888776

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.7e-10  Score=76.31  Aligned_cols=43  Identities=23%  Similarity=0.280  Sum_probs=32.1

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccccCccccCc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEI  250 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~  250 (597)
                      +.++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3456777777777777777777777777777777777777753

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.8e-10  Score=76.63  Aligned_cols=41  Identities=24%  Similarity=0.298  Sum_probs=28.9

Q ss_pred             hhccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        209 MRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       209 ~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      +++|+++++|.|++|++.|.+...|..|+++|++++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45666777777777777777777777777777777777765

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.4e-11  Score=77.51  Aligned_cols=41  Identities=24%  Similarity=0.357  Sum_probs=36.4

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCccccc
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKC  580 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C  580 (597)
                      |+++|++++||.|++|++.|.+...|..|+++ |++++||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI-HTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHH-HHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHH-cCCCCCCCC
Confidence            56778899999999999999999999999987 888999987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.93  E-value=3e-10  Score=74.29  Aligned_cols=39  Identities=21%  Similarity=0.333  Sum_probs=25.8

Q ss_pred             ccCCCcccccccccccccCchhhhhhhccccccCccccC
Q psy12199        211 YHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            456666666666666666666666666666666666665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.1e-10  Score=77.15  Aligned_cols=44  Identities=20%  Similarity=0.261  Sum_probs=40.2

Q ss_pred             HHHHhhccceeecC--cCccccCChhHHHhhhcccCCCCcccccCCC
Q psy12199        539 HTLREHGYKILACE--KCDVKFTHKALLAEHINTKHNTDVTLKCQLC  583 (597)
Q Consensus       539 H~~~h~~~k~~~C~--~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~C  583 (597)
                      |.++|++++||+|.  .|++.|..+..|.+|+++ |++++||+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-HSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTT-SCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHH-hCCCCCCCCCCC
Confidence            34678899999998  899999999999999998 999999999988

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.1e-10  Score=76.96  Aligned_cols=43  Identities=19%  Similarity=0.242  Sum_probs=38.7

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      .|+++|++++||.|++|++.|.+...|..|+++ |++++||+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI-HTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHH-HCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            367788999999999999999999999999998 8999999884

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.3e-10  Score=76.46  Aligned_cols=42  Identities=21%  Similarity=0.336  Sum_probs=34.7

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      |+++|++++||.|++|++.|.....|..|+++ |++++||+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQAL-HAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHH-HTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHH-HCCCCCCCCC
Confidence            45677888888888888888888888888887 8888888884

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.6e-10  Score=72.52  Aligned_cols=39  Identities=31%  Similarity=0.461  Sum_probs=28.1

Q ss_pred             hccCCCcccccccccccccCchhhhhhhccccccCcccc
Q psy12199        210 RYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC  248 (597)
Q Consensus       210 ~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  248 (597)
                      ++|++++||.|++|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            356677777777777777777777777777777777766

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.7e-11  Score=78.49  Aligned_cols=42  Identities=19%  Similarity=0.385  Sum_probs=31.6

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      |+++|++++||+|++|++.|.+...|..|+++ |++++||+|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRL-HSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHH-HHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHH-hCCCCCCCCC
Confidence            55667777777777777777777777777776 7777777775

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.4e-11  Score=78.61  Aligned_cols=43  Identities=19%  Similarity=0.355  Sum_probs=36.0

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      .|+++|++++||.|++|++.|.....|.+|+++ |++++||+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS-HERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHH-HHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHH-hCCCCCCCCC
Confidence            366778888888888888888888888888887 8888888885

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.3e-10  Score=75.69  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=38.1

Q ss_pred             HHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        540 TLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       540 ~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .++|++++||+|++|++.|.+...|..|+++ |++++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRI-HTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTT-TSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHH-hCCCCCCCCCC
Confidence            3568899999999999999999999999998 99999999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.4e-10  Score=75.19  Aligned_cols=41  Identities=27%  Similarity=0.341  Sum_probs=37.5

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCCccccc
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKC  580 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C  580 (597)
                      |+++|++++||.|++|++.|.+...|..|+++ |++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERT-HAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGG-GSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhH-hcCCCCCCC
Confidence            67788999999999999999999999999988 899999987

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.1e-10  Score=86.67  Aligned_cols=64  Identities=22%  Similarity=0.307  Sum_probs=52.6

Q ss_pred             hhHHHHhhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhhc
Q psy12199        203 LSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       203 ~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      ..|..|++.|.+++||.|+.|++.|. ...|..|+ .|.+++||.|+.|++.|. ...|..|+++|.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~   66 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCG   66 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBT
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHcc
Confidence            35677888888888888888888884 88888888 888888888888888776 488888888876

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=6.6e-10  Score=71.78  Aligned_cols=39  Identities=21%  Similarity=0.387  Sum_probs=36.3

Q ss_pred             HHhhccceeecCcCccccCChhHHHhhhcccCCCCccccc
Q psy12199        541 LREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKC  580 (597)
Q Consensus       541 ~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C  580 (597)
                      ++|++++||+|++|++.|.....|..|+++ |++++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERI-HTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGG-CCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHH-hCCCCCcCC
Confidence            358899999999999999999999999998 999999988

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.88  E-value=4.2e-10  Score=73.57  Aligned_cols=41  Identities=22%  Similarity=0.383  Sum_probs=35.0

Q ss_pred             HHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        541 LREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       541 ~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      ++|++++||.|+.|++.|.+...|.+|+++ |++++||+|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQ-THSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHH-HTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHh-hCCCCCccCCC
Confidence            357788899999999999999999999887 88888998864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=4e-10  Score=74.93  Aligned_cols=42  Identities=17%  Similarity=0.234  Sum_probs=35.0

Q ss_pred             HHHhhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        540 TLREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       540 ~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      +++|++++||+|++|++.|.+...|..|+++ |++++||+|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRI-HTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHH-HSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHH-hCCCCCCCCCC
Confidence            3567888888888888888888888888887 88888888863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.70  E-value=7.1e-09  Score=65.93  Aligned_cols=38  Identities=21%  Similarity=0.336  Sum_probs=34.1

Q ss_pred             hhccceeecCcCccccCChhHHHhhhcccCCCCcccccC
Q psy12199        543 EHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQ  581 (597)
Q Consensus       543 h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~  581 (597)
                      |++++||.|++|++.|.+...|..|+++ |++++||.+.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~-H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNV-HRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHT-TCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHH-cCCCccceec
Confidence            5789999999999999999999999998 9999999764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.70  E-value=5.2e-09  Score=66.59  Aligned_cols=37  Identities=24%  Similarity=0.381  Sum_probs=25.4

Q ss_pred             cCCCcccccccccccccCchhhhhhhccccccCcccc
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKC  248 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C  248 (597)
                      |++++||.|++|++.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4566677777777777777777777777777777654

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=2.3e-09  Score=79.47  Aligned_cols=66  Identities=18%  Similarity=0.213  Sum_probs=56.4

Q ss_pred             HHHhhhhhcccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccccC
Q psy12199        174 SLETHLSFIHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSVK  244 (597)
Q Consensus       174 ~l~~H~~~~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  244 (597)
                      .|..|++ .|.+++++.|..|++ .| ....|..|+ .|.+++||.|+.|++.|. ...|..|+++|.+++
T Consensus         4 ~L~~H~~-~~c~~r~~~C~~C~~-~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEE-TECPLRLAVCQHCDL-EL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCC-CCCCCCCEECSSSCC-EE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHhhCc-ccCCCcccCCcccCh-Hh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            4667876 788999999999998 67 488999998 889999999999999877 589999999888764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.68  E-value=6.7e-09  Score=72.59  Aligned_cols=40  Identities=23%  Similarity=0.319  Sum_probs=35.1

Q ss_pred             hhccceeecCc--CccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        543 EHGYKILACEK--CDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       543 h~~~k~~~C~~--C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .+|+|||+|..  |+++|.+.++|.+|+++.|++++||-|.+
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            46999999975  99999999999999854499999999876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.67  E-value=6.9e-09  Score=65.09  Aligned_cols=35  Identities=23%  Similarity=0.504  Sum_probs=19.2

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhccccc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  242 (597)
                      |+++|++++||.|++|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            44555555555555555555555555555555544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=4.6e-10  Score=85.93  Aligned_cols=57  Identities=18%  Similarity=0.199  Sum_probs=35.5

Q ss_pred             hhccCCCcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhhc
Q psy12199        209 MRYHENVREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       209 ~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      .++|++++||.|++|++.|.....|..|+++|++++||.|..|.    ....|..|+++|.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~   73 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYAD   73 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccc
Confidence            44566666666666666666666666666666666666665543    3444555555554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=6.2e-09  Score=65.32  Aligned_cols=35  Identities=23%  Similarity=0.470  Sum_probs=20.8

Q ss_pred             hccCCCcccccccccccccCchhhhhhhccccccC
Q psy12199        210 RYHENVREYECEICKKKFINKSTLKEHSVSHMSVK  244 (597)
Q Consensus       210 ~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  244 (597)
                      ++|++++||.|++|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            34555666666666666666666666666665554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=4.1e-09  Score=80.59  Aligned_cols=56  Identities=13%  Similarity=0.255  Sum_probs=49.9

Q ss_pred             cccCCCccccCCCCccCCCChhhHHHHhhccCCCcccccccccccccCchhhhhhhccccc
Q psy12199        182 IHVQDNQLKCTICNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       182 ~h~~~~~~~C~~C~k~~f~~~~~L~~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  242 (597)
                      +|+++++|.|.+|++ .|.....|..|+++|++++||.|..|    .....|..|+++|.+
T Consensus        19 ~H~~~kpy~C~~C~k-~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDS-KLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCC-EESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCC-EeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhccccc
Confidence            688999999999999 79999999999999999999999765    467788889999887

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=1.7e-08  Score=70.60  Aligned_cols=38  Identities=26%  Similarity=0.310  Sum_probs=24.3

Q ss_pred             cCCCccccccc--ccccccCchhhhhhh-ccccccCccccC
Q psy12199        212 HENVREYECEI--CKKKFINKSTLKEHS-VSHMSVKPFKCE  249 (597)
Q Consensus       212 H~~~k~~~C~~--C~~~F~~~~~L~~H~-~~H~~~~~~~C~  249 (597)
                      .+|+|||.|..  |+++|...++|.+|+ ++|++++||.|.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            34666666654  666666666666665 466666666664

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.56  E-value=1.1e-08  Score=64.18  Aligned_cols=36  Identities=31%  Similarity=0.441  Sum_probs=31.8

Q ss_pred             HHHHhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        539 HTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       539 H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      |+++|++++||+|+.|++.|.+...|..|+++ |.++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGG-GTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHH-hccC
Confidence            67788999999999999999999999999988 6653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.56  E-value=2.6e-08  Score=61.48  Aligned_cols=34  Identities=24%  Similarity=0.459  Sum_probs=21.3

Q ss_pred             cCCCcccccccccccccCchhhhhhhccccccCc
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMSVKP  245 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  245 (597)
                      |++++||.|.+|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5566666666666666666666666666665543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.55  E-value=2.4e-08  Score=61.64  Aligned_cols=33  Identities=24%  Similarity=0.502  Sum_probs=19.2

Q ss_pred             cCCCcccccccccccccCchhhhhhhccccccC
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMSVK  244 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  244 (597)
                      |++++||.|++|++.|.....|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            445555666666666666666666655555554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=9.8e-09  Score=64.38  Aligned_cols=36  Identities=22%  Similarity=0.517  Sum_probs=31.1

Q ss_pred             HHhhccceeecCcCccccCChhHHHhhhcccCCCCcc
Q psy12199        541 LREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVT  577 (597)
Q Consensus       541 ~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~  577 (597)
                      ++|++++||.|++|++.|.+...|..|+++ |++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKT-NHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHH-HCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHH-HcCCCC
Confidence            467889999999999999999999999988 777764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.52  E-value=3.3e-08  Score=60.98  Aligned_cols=35  Identities=29%  Similarity=0.516  Sum_probs=31.2

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCCcc
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTDVT  577 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~  577 (597)
                      +|++++||.|++|++.|.....|.+|+++ |++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKV-HTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGG-GTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence            37799999999999999999999999998 877764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.52  E-value=3.1e-08  Score=60.76  Aligned_cols=32  Identities=19%  Similarity=0.375  Sum_probs=29.0

Q ss_pred             hhccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        543 EHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       543 h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      +.|++||+|+.|+++|+++++|.+|+        ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~--------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ--------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH--------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC--------CeECcC
Confidence            46899999999999999999999998        788875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.51  E-value=3.2e-08  Score=61.01  Aligned_cols=35  Identities=23%  Similarity=0.320  Sum_probs=30.5

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCCcc
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTDVT  577 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~  577 (597)
                      +|++++||.|++|++.|.+...|..|++. |++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~-h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIRE-VHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHH-TSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHH-HcCCCC
Confidence            36789999999999999999999999998 777764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.48  E-value=3.8e-08  Score=59.78  Aligned_cols=30  Identities=23%  Similarity=0.524  Sum_probs=17.1

Q ss_pred             ccccccccccccCchhhhhhhccccccCcc
Q psy12199        217 EYECEICKKKFINKSTLKEHSVSHMSVKPF  246 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~  246 (597)
                      ||.|++|++.|...+.|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            455555555555555555555555555555

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=4.5e-08  Score=61.06  Aligned_cols=32  Identities=19%  Similarity=0.279  Sum_probs=16.8

Q ss_pred             cCCCccccccc--ccccccCchhhhhhhcccccc
Q psy12199        212 HENVREYECEI--CKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       212 H~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      +++++||.|++  |+++|...+.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34455555543  555555555555555555543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=5.3e-08  Score=60.90  Aligned_cols=32  Identities=28%  Similarity=0.402  Sum_probs=15.6

Q ss_pred             ccCCCcccccccccccccCchhhhhh-hccccc
Q psy12199        211 YHENVREYECEICKKKFINKSTLKEH-SVSHMS  242 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~~~L~~H-~~~H~~  242 (597)
                      +|++++||.|++|++.|.....|..| +++|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            34444555555555555555555555 444443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=8.5e-08  Score=59.52  Aligned_cols=33  Identities=27%  Similarity=0.483  Sum_probs=19.9

Q ss_pred             ccCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        211 YHENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      .|++++||.|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            355556666666666666666666666666554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=4.6e-08  Score=61.22  Aligned_cols=34  Identities=21%  Similarity=0.340  Sum_probs=30.2

Q ss_pred             HHhhccceeecCcCccccCChhHHHhh-hcccCCCC
Q psy12199        541 LREHGYKILACEKCDVKFTHKALLAEH-INTKHNTD  575 (597)
Q Consensus       541 ~~h~~~k~~~C~~C~~~F~~~~~L~~H-~~~~H~~~  575 (597)
                      ++|++++||+|+.|++.|..+..|..| ++. |+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~-H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQK-HSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHH-TCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHH-ccCc
Confidence            468899999999999999999999999 776 7764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=7.6e-08  Score=60.02  Aligned_cols=32  Identities=25%  Similarity=0.415  Sum_probs=28.4

Q ss_pred             hhccceeecCc--CccccCChhHHHhhhcccCCCC
Q psy12199        543 EHGYKILACEK--CDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       543 h~~~k~~~C~~--C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      ++|++||+|+.  |+++|.+++.|.+|+++ |+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~-Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKV-HTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHH-HSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cCCC
Confidence            57899999986  99999999999999998 7765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.40  E-value=1.9e-07  Score=56.60  Aligned_cols=31  Identities=19%  Similarity=0.266  Sum_probs=16.4

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhhccceee
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREHGYKILA  550 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~  550 (597)
                      +|.|++||+.|.....|..|+++|+|++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            3455555555555555555555555555543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.40  E-value=4.1e-08  Score=59.13  Aligned_cols=31  Identities=23%  Similarity=0.577  Sum_probs=25.1

Q ss_pred             cccccccccccccCchhhhhhhccccccCcc
Q psy12199        216 REYECEICKKKFINKSTLKEHSVSHMSVKPF  246 (597)
Q Consensus       216 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~  246 (597)
                      +||.|++|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4688888888888888888888888888776

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=6.9e-08  Score=60.36  Aligned_cols=33  Identities=27%  Similarity=0.474  Sum_probs=18.4

Q ss_pred             ccCCCcccccccccccccCc-hhhhhhhcccccc
Q psy12199        211 YHENVREYECEICKKKFINK-STLKEHSVSHMSV  243 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~-~~L~~H~~~H~~~  243 (597)
                      +|++++||.|++|++.|... ..|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            45555555555555555555 5555555555543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=1e-07  Score=59.17  Aligned_cols=32  Identities=25%  Similarity=0.474  Sum_probs=17.2

Q ss_pred             cCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      |++++||.|++|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            44555555555555555555555555555443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=7.9e-08  Score=60.52  Aligned_cols=35  Identities=23%  Similarity=0.464  Sum_probs=22.3

Q ss_pred             cCCCcccccc--cccccccCchhhhhhhccccccCcc
Q psy12199        212 HENVREYECE--ICKKKFINKSTLKEHSVSHMSVKPF  246 (597)
Q Consensus       212 H~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~  246 (597)
                      |++++||.|.  .|++.|.....|.+|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4456666666  3666666666666666666666655

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.38  E-value=8.6e-08  Score=58.76  Aligned_cols=26  Identities=27%  Similarity=0.422  Sum_probs=17.6

Q ss_pred             cCCCcccccccccccccCchhhhhhh
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHS  237 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~  237 (597)
                      +.|++||.|++|+++|.+.++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            34666777777777777777777776

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.1e-07  Score=58.99  Aligned_cols=32  Identities=22%  Similarity=0.345  Sum_probs=16.7

Q ss_pred             cCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      |.+++||.|++|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44455555555555555555555555555443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=9.9e-08  Score=60.04  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=30.1

Q ss_pred             hhccceeecC--cCccccCChhHHHhhhcccCCCCccc
Q psy12199        543 EHGYKILACE--KCDVKFTHKALLAEHINTKHNTDVTL  578 (597)
Q Consensus       543 h~~~k~~~C~--~C~~~F~~~~~L~~H~~~~H~~~~~~  578 (597)
                      |+|++||.|+  .|++.|.+...|.+|+++ |++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHK-HEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHH-HHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHH-hCCCCCC
Confidence            5688999998  599999999999999987 8888877

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=1.8e-07  Score=57.95  Aligned_cols=32  Identities=34%  Similarity=0.586  Sum_probs=16.2

Q ss_pred             cCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      |.++++|.|++|++.|.+...|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            44445555555555555555555555555443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.3e-07  Score=57.43  Aligned_cols=34  Identities=18%  Similarity=0.323  Sum_probs=30.2

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCCc
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTDV  576 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~  576 (597)
                      .|++++||+|++|++.|.....|..|+++ |++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLV-HGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTT-TSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHH-hcCCC
Confidence            47789999999999999999999999998 87653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.31  E-value=2.2e-07  Score=61.98  Aligned_cols=34  Identities=24%  Similarity=0.444  Sum_probs=29.3

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhc-ccCCCCc
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHIN-TKHNTDV  576 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~-~~H~~~~  576 (597)
                      +|+|++||.|.+|++.|.....|..|++ + |+++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~-H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHS-HLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHS-SCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhh-cCCCC
Confidence            4789999999999999999999999999 6 87764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=2.2e-07  Score=57.61  Aligned_cols=33  Identities=27%  Similarity=0.468  Sum_probs=29.5

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      .|++++||+|++|++.|.....|..|+++ |+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNR-HSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHH-SSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHH-hccC
Confidence            47889999999999999999999999988 7765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.30  E-value=1.2e-07  Score=63.01  Aligned_cols=37  Identities=19%  Similarity=0.362  Sum_probs=22.8

Q ss_pred             HHhhccCCCcccccc--cccccccCchhhhhhhcccccc
Q psy12199        207 IHMRYHENVREYECE--ICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      .|+..|++++||.|+  .|++.|...+.|..|+++|+++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            344456666666664  4666666666666666666654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.28  E-value=2.1e-07  Score=62.05  Aligned_cols=32  Identities=31%  Similarity=0.725  Sum_probs=15.5

Q ss_pred             cCCCcccccccccccccCchhhhhhhc-ccccc
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSV-SHMSV  243 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~  243 (597)
                      |++++||.|.+|++.|.....|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            444455555555555555555555544 44443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=1.8e-07  Score=57.93  Aligned_cols=33  Identities=24%  Similarity=0.362  Sum_probs=28.7

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      +|.+++||+|++|++.|.....|..|+++ |+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRK-HTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHH-HTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHH-ccCC
Confidence            47788999999999999999999999987 7665

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=2.5e-07  Score=57.34  Aligned_cols=32  Identities=28%  Similarity=0.479  Sum_probs=16.6

Q ss_pred             cCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      |.+++||.|++|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            34445555555555555555555555555443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=1.2e-07  Score=59.28  Aligned_cols=33  Identities=24%  Similarity=0.421  Sum_probs=28.2

Q ss_pred             HhhccceeecCcCccccCCh-hHHHhhhcccCCCC
Q psy12199        542 REHGYKILACEKCDVKFTHK-ALLAEHINTKHNTD  575 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~-~~L~~H~~~~H~~~  575 (597)
                      +|++++||+|+.|++.|.+. ..|..|+++ |+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~-H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWA-HEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHH-HHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHh-cCCC
Confidence            57888999999999999998 999999987 6654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.24  E-value=8.8e-08  Score=57.63  Aligned_cols=31  Identities=32%  Similarity=0.535  Sum_probs=27.1

Q ss_pred             ceeecCcCccccCChhHHHhhhcccCCCCccc
Q psy12199        547 KILACEKCDVKFTHKALLAEHINTKHNTDVTL  578 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~  578 (597)
                      +||+|+.|++.|.+.+.|..|+++ |++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~-H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKT-AFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTS-SSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHH-HccCCCC
Confidence            578999999999999999999987 8888886

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=4.4e-07  Score=56.13  Aligned_cols=33  Identities=30%  Similarity=0.457  Sum_probs=26.8

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      .|.+++||.|++|++.|.....|..|+++ |+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~-H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLL-HTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHH-HSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHH-hcCC
Confidence            36778888888888888888888888887 6655

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=4.8e-07  Score=55.96  Aligned_cols=33  Identities=30%  Similarity=0.582  Sum_probs=28.0

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      .|.+++||.|++|++.|.....|..|+++ |+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRI-HTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHH-HCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHH-hCCC
Confidence            36788899999999999999999999987 7665

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.16  E-value=4.6e-07  Score=56.50  Aligned_cols=32  Identities=25%  Similarity=0.388  Sum_probs=16.4

Q ss_pred             cCCCccccccc--ccccccCchhhhhhhcccccc
Q psy12199        212 HENVREYECEI--CKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       212 H~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      |++++||.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34455555542  555555555555555555443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.14  E-value=1.4e-06  Score=61.82  Aligned_cols=40  Identities=20%  Similarity=0.222  Sum_probs=33.8

Q ss_pred             CCCceecccccccccchhhHHHHHHhccCccccCCcChhc
Q psy12199        465 KMKPYTCEICSKTYTVEGSLLTHYDMHSGEFYQCDVCFKE  504 (597)
Q Consensus       465 ~~k~~~C~~C~~~f~~~~~L~~H~~~H~~e~y~C~~C~~~  504 (597)
                      +++||.|.+|++.|.....|..|+++|+++...+.+++..
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~~   49 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLP   49 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCCC
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCCccccccccCC
Confidence            4589999999999999999999999999987677766643

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.11  E-value=9.6e-07  Score=51.39  Aligned_cols=28  Identities=25%  Similarity=0.573  Sum_probs=17.0

Q ss_pred             cccccccccccccCchhhhhhhcccccc
Q psy12199        216 REYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       216 k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566666666666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=1.6e-06  Score=50.00  Aligned_cols=27  Identities=37%  Similarity=1.102  Sum_probs=21.4

Q ss_pred             CceecccccccccchhhHHHHHHhccC
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSG  493 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~  493 (597)
                      +||.|++||+.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            678888888888888888888887764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.08  E-value=1.2e-06  Score=62.10  Aligned_cols=29  Identities=24%  Similarity=0.547  Sum_probs=13.2

Q ss_pred             CCcccccccccccccCchhhhhhhccccc
Q psy12199        214 NVREYECEICKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       214 ~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  242 (597)
                      +++||.|.+|++.|.....|.+|+++|++
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg   38 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGV   38 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence            34444444444444444444444444444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=1.8e-06  Score=49.22  Aligned_cols=26  Identities=23%  Similarity=0.652  Sum_probs=19.0

Q ss_pred             CceecccccccccchhhHHHHHHhcc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      +||.|++||+.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            56777777777777777777777764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=1.5e-06  Score=49.64  Aligned_cols=26  Identities=31%  Similarity=0.627  Sum_probs=18.8

Q ss_pred             CceecccccccccchhhHHHHHHhcc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      +||.|++||+.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            56777777777777777777777663

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.07  E-value=8.3e-07  Score=55.28  Aligned_cols=33  Identities=18%  Similarity=0.327  Sum_probs=27.5

Q ss_pred             HhhccceeecCc--CccccCChhHHHhhhcccCCCC
Q psy12199        542 REHGYKILACEK--CDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       542 ~h~~~k~~~C~~--C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      .|++++||.|.+  |++.|...+.|.+|+++ |+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~-H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRW-HTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHH-HHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh-cCCC
Confidence            367889999984  99999999999999887 7665

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=8.4e-07  Score=58.76  Aligned_cols=39  Identities=26%  Similarity=0.466  Sum_probs=34.4

Q ss_pred             hhhhhhhccccccCccccC--ccchhhhchHHHHHHHHhhc
Q psy12199        231 STLKEHSVSHMSVKPFKCE--ICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       231 ~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~  269 (597)
                      ..+..|+..|++++||.|+  .|++.|...+.|..|+++|+
T Consensus         4 ~~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~   44 (47)
T 1ncs_A            4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             CSSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             hHHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHcc
Confidence            3455667789999999996  79999999999999999997

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.06  E-value=1.9e-06  Score=50.04  Aligned_cols=28  Identities=21%  Similarity=0.502  Sum_probs=22.5

Q ss_pred             CceecccccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +||.|++||+.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4688888888888888888888888764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.04  E-value=2.4e-06  Score=50.00  Aligned_cols=28  Identities=29%  Similarity=0.823  Sum_probs=24.1

Q ss_pred             CceecccccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +||.|+.||+.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            6788999999998888999998888764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.30  E-value=6.1e-07  Score=52.30  Aligned_cols=27  Identities=30%  Similarity=0.561  Sum_probs=16.7

Q ss_pred             ccccccccccccCchhhhhhhcccccc
Q psy12199        217 EYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      ||.|++|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            566666666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.03  E-value=2.4e-06  Score=50.05  Aligned_cols=29  Identities=31%  Similarity=0.621  Sum_probs=23.2

Q ss_pred             cceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        546 YKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       546 ~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      ++||.|+.|++.|.....|..|+++ |+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~-h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLET-HDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHT-TCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHH-hccC
Confidence            4678888888888888888888887 6654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.03  E-value=1.4e-06  Score=50.68  Aligned_cols=26  Identities=35%  Similarity=0.789  Sum_probs=12.4

Q ss_pred             ccccccccccccCchhhhhhhccccc
Q psy12199        217 EYECEICKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~~L~~H~~~H~~  242 (597)
                      ||.|++|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            34444444444444444444444443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.03  E-value=2.1e-06  Score=51.27  Aligned_cols=28  Identities=36%  Similarity=0.716  Sum_probs=16.6

Q ss_pred             cccccc--cccccccCchhhhhhhcccccc
Q psy12199        216 REYECE--ICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       216 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456665  5666666666666666666554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.28  E-value=7e-07  Score=52.47  Aligned_cols=28  Identities=25%  Similarity=0.616  Sum_probs=17.3

Q ss_pred             cccccccccccccCchhhhhhhcccccc
Q psy12199        216 REYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       216 k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      +||.|++|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4566666666666666666666666554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.02  E-value=2.7e-06  Score=49.34  Aligned_cols=28  Identities=29%  Similarity=0.861  Sum_probs=21.9

Q ss_pred             CceecccccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +||.|++||+.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3678888888888888888888888764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.01  E-value=2.4e-06  Score=48.64  Aligned_cols=26  Identities=23%  Similarity=0.745  Sum_probs=17.3

Q ss_pred             ceecccccccccchhhHHHHHHhccC
Q psy12199        468 PYTCEICSKTYTVEGSLLTHYDMHSG  493 (597)
Q Consensus       468 ~~~C~~C~~~f~~~~~L~~H~~~H~~  493 (597)
                      ||.|++||+.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46677777777777777777776665

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.01  E-value=2.1e-06  Score=49.03  Aligned_cols=26  Identities=19%  Similarity=0.346  Sum_probs=22.8

Q ss_pred             cceeecCcCccccCChhHHHhhhcccC
Q psy12199        546 YKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       546 ~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      ++||+|+.|++.|...+.|..|+++ |
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~-H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRG-H   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTT-C
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHh-c
Confidence            4789999999999999999999887 5

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.00  E-value=2.2e-06  Score=50.78  Aligned_cols=27  Identities=26%  Similarity=0.645  Sum_probs=15.0

Q ss_pred             ccccc--cccccccCchhhhhhhcccccc
Q psy12199        217 EYECE--ICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       217 ~~~C~--~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      ||.|+  .||+.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.99  E-value=3.1e-06  Score=48.68  Aligned_cols=27  Identities=22%  Similarity=0.566  Sum_probs=23.0

Q ss_pred             cceeecCcCccccCChhHHHhhhcccCC
Q psy12199        546 YKILACEKCDVKFTHKALLAEHINTKHN  573 (597)
Q Consensus       546 ~k~~~C~~C~~~F~~~~~L~~H~~~~H~  573 (597)
                      ++||.|+.|++.|.....|..|++. |+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~-h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRV-HT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTT-SC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHh-cC
Confidence            4789999999999999999999887 64

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.98  E-value=2e-06  Score=50.36  Aligned_cols=27  Identities=30%  Similarity=0.572  Sum_probs=13.5

Q ss_pred             ccccccccccccCchhhhhhhcccccc
Q psy12199        217 EYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      ||.|++|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            445555555555555555555554444

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.98  E-value=2.7e-06  Score=48.47  Aligned_cols=26  Identities=23%  Similarity=0.498  Sum_probs=21.6

Q ss_pred             cceeecCcCccccCChhHHHhhhcccC
Q psy12199        546 YKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       546 ~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      ++||.|+.|++.|.....|..|+++ |
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~-H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRT-H   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHH-C
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHH-c
Confidence            4688888888888888888888876 5

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.96  E-value=1.5e-06  Score=50.45  Aligned_cols=27  Identities=30%  Similarity=0.540  Sum_probs=13.4

Q ss_pred             ccccccccccccCchhhhhhhcccccc
Q psy12199        217 EYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            445555555555555555555544443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.96  E-value=1.8e-06  Score=50.07  Aligned_cols=27  Identities=37%  Similarity=0.596  Sum_probs=14.3

Q ss_pred             ccccccccccccCchhhhhhhcccccc
Q psy12199        217 EYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.96  E-value=3.2e-06  Score=49.01  Aligned_cols=28  Identities=43%  Similarity=0.886  Sum_probs=23.1

Q ss_pred             CceecccccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4688888888888888888888888764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.96  E-value=2.8e-06  Score=48.33  Aligned_cols=25  Identities=36%  Similarity=0.909  Sum_probs=13.2

Q ss_pred             cccccccccccCchhhhhhhccccc
Q psy12199        218 YECEICKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       218 ~~C~~C~~~F~~~~~L~~H~~~H~~  242 (597)
                      |.|.+|++.|.+...|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            4555555555555555555555543

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=4.6e-06  Score=49.74  Aligned_cols=28  Identities=29%  Similarity=0.767  Sum_probs=23.7

Q ss_pred             Cceecc--cccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCE--ICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~--~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +||.|+  .||+.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            678888  7888888888888888888875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.93  E-value=3.7e-06  Score=48.72  Aligned_cols=28  Identities=29%  Similarity=0.635  Sum_probs=22.7

Q ss_pred             CceecccccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +||.|++||+.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4688888888888888888888888764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.91  E-value=4.2e-06  Score=48.98  Aligned_cols=27  Identities=26%  Similarity=0.646  Sum_probs=16.6

Q ss_pred             ccccccccccccCchhhhhh-hcccccc
Q psy12199        217 EYECEICKKKFINKSTLKEH-SVSHMSV  243 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~~L~~H-~~~H~~~  243 (597)
                      ||.|+.|++.|.+...|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 5566554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.91  E-value=5.2e-06  Score=49.07  Aligned_cols=28  Identities=29%  Similarity=0.589  Sum_probs=19.6

Q ss_pred             ceeecC--cCccccCChhHHHhhhcccCCCC
Q psy12199        547 KILACE--KCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       547 k~~~C~--~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      +||.|+  .|++.|.+...|..|+++ |+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~-H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRT-HTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHH-hcCC
Confidence            467776  777777777777777776 6554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.12  E-value=1.6e-06  Score=50.47  Aligned_cols=28  Identities=29%  Similarity=0.555  Sum_probs=19.0

Q ss_pred             ceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        547 KILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      +||.|+.|++.|.....|..|+++ |+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~-H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQ-HTGE   28 (29)
Confidence            467777777777777777777766 5543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.12  E-value=1.6e-06  Score=50.79  Aligned_cols=29  Identities=24%  Similarity=0.571  Sum_probs=21.8

Q ss_pred             cceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        546 YKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       546 ~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      ++||.|+.|++.|.....|..|+++ |+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~-h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRI-HTGE   29 (30)
Confidence            3678888888888888888888877 6554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.89  E-value=9e-06  Score=47.42  Aligned_cols=26  Identities=23%  Similarity=0.577  Sum_probs=12.1

Q ss_pred             CCCCcCccccCChHHHHHHHHHhhcc
Q psy12199        521 FSCDECSVECQDLNALRMHTLREHGY  546 (597)
Q Consensus       521 ~~C~~C~~~f~~~~~L~~H~~~h~~~  546 (597)
                      |.|..|++.|.....|..|+++|+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHccC
Confidence            44444444444444444444444443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.88  E-value=6.2e-06  Score=48.23  Aligned_cols=28  Identities=36%  Similarity=0.680  Sum_probs=21.3

Q ss_pred             ceeecCcCccccCChhHHHhh-hcccCCCC
Q psy12199        547 KILACEKCDVKFTHKALLAEH-INTKHNTD  575 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H-~~~~H~~~  575 (597)
                      +||.|+.|++.|.+...|..| +++ |+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~-H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKI-HSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTT-SCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHH-ccCC
Confidence            468888888888888888888 455 7665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.09  E-value=1.8e-06  Score=48.69  Aligned_cols=24  Identities=38%  Similarity=0.838  Sum_probs=14.6

Q ss_pred             ceecccccccccchhhHHHHHHhc
Q psy12199        468 PYTCEICSKTYTVEGSLLTHYDMH  491 (597)
Q Consensus       468 ~~~C~~C~~~f~~~~~L~~H~~~H  491 (597)
                      ||.|++||+.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            456666666666666666666555

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.07  E-value=2e-06  Score=48.48  Aligned_cols=24  Identities=42%  Similarity=0.833  Sum_probs=12.6

Q ss_pred             ccccccccccccCchhhhhhhccc
Q psy12199        217 EYECEICKKKFINKSTLKEHSVSH  240 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~~L~~H~~~H  240 (597)
                      ||.|++||+.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.70  E-value=1.9e-05  Score=45.59  Aligned_cols=27  Identities=26%  Similarity=0.664  Sum_probs=20.5

Q ss_pred             Cceecc--cccccccchhhHHHHHHhccC
Q psy12199        467 KPYTCE--ICSKTYTVEGSLLTHYDMHSG  493 (597)
Q Consensus       467 k~~~C~--~C~~~f~~~~~L~~H~~~H~~  493 (597)
                      ++|.|+  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            367787  888888888888888877764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.56  E-value=2.2e-05  Score=45.30  Aligned_cols=25  Identities=28%  Similarity=0.647  Sum_probs=12.9

Q ss_pred             ccccc--cccccccCchhhhhhhcccc
Q psy12199        217 EYECE--ICKKKFINKSTLKEHSVSHM  241 (597)
Q Consensus       217 ~~~C~--~C~~~F~~~~~L~~H~~~H~  241 (597)
                      ||.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            44555  55555555555555555543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.49  E-value=0.0001  Score=51.89  Aligned_cols=52  Identities=31%  Similarity=0.538  Sum_probs=41.8

Q ss_pred             CCCCc--CccccCChHHHHHHHH-Hhhccc------eeecC--cCccccCChhHHHhhhcccC
Q psy12199        521 FSCDE--CSVECQDLNALRMHTL-REHGYK------ILACE--KCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       521 ~~C~~--C~~~f~~~~~L~~H~~-~h~~~k------~~~C~--~C~~~F~~~~~L~~H~~~~H  572 (597)
                      |.|..  |++.|.+...|..|+. .|.|.+      +|.|.  .|++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            45554  8888888888888874 676655      79996  99999999999999998755

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.63  E-value=0.0047  Score=43.28  Aligned_cols=56  Identities=14%  Similarity=0.201  Sum_probs=42.5

Q ss_pred             CcCccCCCCHHHHHHHHHHhcCCCCCCCCCCCccccCCCCCCcccccCccCceecc--cCccccCChhhHHhHhhhcc
Q psy12199        368 EPCNLTFKNEWQYLVHNRAVHELPPEPNSGAGSVLQNNPYPPLRKAKQHVKSVTCS--VCEKAFSSKENCKAHYTRQH  443 (597)
Q Consensus       368 ~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~h  443 (597)
                      ..|++.|.+...|..|+...|.......                    ...+|.|.  .|++.+.....|..|++..|
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~--------------------~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKH--------------------PMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCC--------------------SSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCC--------------------CCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            3588999999999999876776221110                    11479997  89999999999999998655

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.23  E-value=0.0015  Score=51.94  Aligned_cols=32  Identities=22%  Similarity=0.321  Sum_probs=28.3

Q ss_pred             HHHhhccceeecCcCccccCChhHHHhhhccc
Q psy12199        540 TLREHGYKILACEKCDVKFTHKALLAEHINTK  571 (597)
Q Consensus       540 ~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~  571 (597)
                      -..|+|++||.|..|++.|.+...|..|++++
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            34688999999999999999999999999863

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.81  E-value=0.0019  Score=52.60  Aligned_cols=75  Identities=21%  Similarity=0.339  Sum_probs=46.3

Q ss_pred             CccccCCCCccCCCChhhHHHHh--hccCCC-cccccccc------cccccCchhhhhhhccccccCccccCccchhhhc
Q psy12199        187 NQLKCTICNKENFKNQLSLSIHM--RYHENV-REYECEIC------KKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSR  257 (597)
Q Consensus       187 ~~~~C~~C~k~~f~~~~~L~~H~--~~H~~~-k~~~C~~C------~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~  257 (597)
                      +++.|.+|+. .|.+...+..|.  +.|... +.|.+..+      ++.+..    ..+...+.+.+.|.|.+|+..|.+
T Consensus        31 ~~~~C~~C~v-~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           31 SDTQCKVCSA-VLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKA----APAEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             CSSEETTTTE-ECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSC----CSSCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCcCcCCCC-EeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCC----CccccccCCCCCeEcCCCCCEeCC
Confidence            4566777776 677777777776  344321 23333110      112211    123345667778999999999999


Q ss_pred             hHHHHHHHH
Q psy12199        258 ASRLRAHLK  266 (597)
Q Consensus       258 ~~~L~~H~~  266 (597)
                      ...|..|+.
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999984

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.76  E-value=0.0022  Score=50.91  Aligned_cols=29  Identities=17%  Similarity=0.458  Sum_probs=15.7

Q ss_pred             ccccccCccccCccchhhhchHHHHHHHH
Q psy12199        238 VSHMSVKPFKCEICGHYLSRASRLRAHLK  266 (597)
Q Consensus       238 ~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  266 (597)
                      ..|+|++||.|..|++.|.+.+.|..|++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            34555555555555555555555555553

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.39  E-value=0.011  Score=48.05  Aligned_cols=72  Identities=17%  Similarity=0.294  Sum_probs=47.7

Q ss_pred             cccCCcChhccCCcHHHHHHh--hhcC----CCCCCcC------ccccCChHHHHHHHHHhhccceeecCcCccccCChh
Q psy12199        495 FYQCDVCFKEFRSSVTLRNHT--RRHD----NFSCDEC------SVECQDLNALRMHTLREHGYKILACEKCDVKFTHKA  562 (597)
Q Consensus       495 ~y~C~~C~~~F~~~~~L~~H~--~~H~----~~~C~~C------~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~  562 (597)
                      ++.|.+|+..|.+.+.+..|.  +.|.    .|.+..+      ++.+....    +...+.+.+.|-|.+|+.+|.+..
T Consensus        32 ~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~~  107 (127)
T 1zu1_A           32 DTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSPV  107 (127)
T ss_dssp             SSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSHH
T ss_pred             CCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCHH
Confidence            788999999999999999998  5564    2332111      11221111    112344566788999999998888


Q ss_pred             HHHhhhcc
Q psy12199        563 LLAEHINT  570 (597)
Q Consensus       563 ~L~~H~~~  570 (597)
                      .|..|+..
T Consensus       108 ~~~~H~~g  115 (127)
T 1zu1_A          108 VAESHYIG  115 (127)
T ss_dssp             HHHHHHTS
T ss_pred             HHHHHHCC
Confidence            88888753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.80  E-value=0.014  Score=36.52  Aligned_cols=22  Identities=32%  Similarity=0.523  Sum_probs=11.5

Q ss_pred             cccCCcChhccCCcHHHHHHhh
Q psy12199        495 FYQCDVCFKEFRSSVTLRNHTR  516 (597)
Q Consensus       495 ~y~C~~C~~~F~~~~~L~~H~~  516 (597)
                      +|.|+.|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4455555555555555555554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.66  E-value=0.011  Score=51.18  Aligned_cols=102  Identities=12%  Similarity=0.273  Sum_probs=66.9

Q ss_pred             ecccccccccchh-----hHHHHHHhccCccccC--CcChhccCCcHHHHHHhhh--cCCCCCCcCccccCChHHHHHHH
Q psy12199        470 TCEICSKTYTVEG-----SLLTHYDMHSGEFYQC--DVCFKEFRSSVTLRNHTRR--HDNFSCDECSVECQDLNALRMHT  540 (597)
Q Consensus       470 ~C~~C~~~f~~~~-----~L~~H~~~H~~e~y~C--~~C~~~F~~~~~L~~H~~~--H~~~~C~~C~~~f~~~~~L~~H~  540 (597)
                      .|+.|...+....     .+.+-+.   .-...|  .-|+..+. ...|..|+..  +.+..|+.|+..+ .+..|..|+
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~---~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~  129 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL---SLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHI  129 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH---TSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh---hcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHh
Confidence            6888877765431     1111111   124567  35776654 5567788754  2366788888887 677788898


Q ss_pred             HHhhccceeecCcCccccCChhHHHhhhcccCCCCccc
Q psy12199        541 LREHGYKILACEKCDVKFTHKALLAEHINTKHNTDVTL  578 (597)
Q Consensus       541 ~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~  578 (597)
                      ...-+.++-.|+.|+..| ....|..|... ++|+.++
T Consensus       130 ~~~C~~r~~~C~~C~~~~-~~~~l~~H~~~-~~~~~~~  165 (170)
T 3hcs_A          130 LKDCPRRQVSCDNCAASM-AFEDKEIHDQN-CPLALEH  165 (170)
T ss_dssp             HHTCTTCEEECTTTCCEE-EGGGHHHHHTT-CCC----
T ss_pred             hhhCCCCCeECCCCCCcc-CHHHHHhHHHh-CcChhhh
Confidence            877788888999998877 45778899877 7776554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.40  E-value=0.0074  Score=52.22  Aligned_cols=14  Identities=14%  Similarity=0.337  Sum_probs=9.5

Q ss_pred             CCCCCccCccCCCc
Q psy12199        123 IPRCEECDINFPSK  136 (597)
Q Consensus       123 ~~~C~~C~~~f~~~  136 (597)
                      .+.|++|...|...
T Consensus        18 ~~~C~IC~~~~~~p   31 (170)
T 3hcs_A           18 KYECPICLMALREA   31 (170)
T ss_dssp             GGBCTTTCSBCSSE
T ss_pred             CCCCCCCChhhcCc
Confidence            46788887776554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.40  E-value=0.04  Score=34.52  Aligned_cols=25  Identities=20%  Similarity=0.351  Sum_probs=22.8

Q ss_pred             CceecccccccccchhhHHHHHHhc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMH  491 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H  491 (597)
                      .+|.|+.|+..|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5799999999999999999999843

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=92.91  E-value=0.049  Score=31.97  Aligned_cols=28  Identities=18%  Similarity=0.361  Sum_probs=23.7

Q ss_pred             eeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        548 ILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      .|.|++|.+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4889999999999999999998878654

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=90.79  E-value=0.16  Score=29.77  Aligned_cols=28  Identities=25%  Similarity=0.513  Sum_probs=25.4

Q ss_pred             ceecccCccccCChhhHHhHhhhccCCC
Q psy12199        419 SVTCSVCEKAFSSKENCKAHYTRQHGNK  446 (597)
Q Consensus       419 ~~~C~~C~~~f~~~~~L~~H~~~~h~~~  446 (597)
                      .|.|++|-+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            5999999999999999999999888653

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=82.40  E-value=0.45  Score=34.31  Aligned_cols=48  Identities=25%  Similarity=0.494  Sum_probs=24.8

Q ss_pred             ccccc-ccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHH
Q psy12199        216 REYEC-EICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHL  265 (597)
Q Consensus       216 k~~~C-~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~  265 (597)
                      .+..| ..|+..+. +..|..|+...-..++..|..|+..|.. ..|..|.
T Consensus        15 ~~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTT
T ss_pred             cccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHH
Confidence            33455 34555443 3555556554445555666666665543 3345554

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=81.65  E-value=0.45  Score=33.86  Aligned_cols=46  Identities=20%  Similarity=0.457  Sum_probs=27.3

Q ss_pred             CCCCcCccccCChHHHHHHHHHhhccceeecCcCccccCChhHHHhhh
Q psy12199        521 FSCDECSVECQDLNALRMHTLREHGYKILACEKCDVKFTHKALLAEHI  568 (597)
Q Consensus       521 ~~C~~C~~~f~~~~~L~~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~  568 (597)
                      |.|+.||..+. +..|..|...-.+...|.|-.|++.|.. ..++.|-
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            55555654443 3456666555455556788888888863 4455553

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=80.27  E-value=0.55  Score=33.09  Aligned_cols=11  Identities=27%  Similarity=1.195  Sum_probs=5.8

Q ss_pred             ccccccccccc
Q psy12199        218 YECEICKKKFI  228 (597)
Q Consensus       218 ~~C~~C~~~F~  228 (597)
                      |+|+.||..|.
T Consensus        52 FkCP~CgEEFy   62 (95)
T 2k5c_A           52 FKCPVCGEEFY   62 (95)
T ss_dssp             EECTTTCCEEE
T ss_pred             hcCCCccHHHh
Confidence            55555555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	597
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.002

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 218 YECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAH 268
           Y C+ C K F +KS    H   H+ ++P+ C +CG        L  H+K H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 3e-04
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSG-EFYQCDVCFKEFRSSVTLRNHTRRH 518
           K Y C+ C K++T +     H  MH G   Y C VC K+F+    L  H + H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 194 CNKENFKNQLSLSIHMRYHENVREYECEICKKKFINKSTLKEHSVSH 240
           C K +F ++     HM  H  +R Y C +C KKF  K  L  H   H
Sbjct: 8   CGK-SFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 6e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 218 YECEICKKKFINKSTLKEHSVS-HMSVKPFKCEI 250
           Y C+ C K F     L  H    H S +P KC++
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 467 KPYTCEICSKTYTVEGSLLTHY-DMHSGEF-YQCDV 500
           KPY C+ C K ++    L  H   +H+ E  ++C V
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.6 bits (85), Expect = 2e-04
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHMSV 243
             R    ++ ++C  C + F     L  H   HM V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 0.003
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 236 HSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHSVV 271
            +     +KPF+C  C    SR+  L  H K H +V
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (78), Expect = 0.002
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 467 KPYTCEICSKTYTVEGSLLTHYDMHSGE 494
           KPY C  C K ++    L+ H  +H+GE
Sbjct: 6   KPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 218 YECE--ICKKKFINKSTLKEHSVSHMSVKPFKCE 249
           + C    C K F  K  LKEH   H   + + CE
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	597
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.29
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.24
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.24
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.16
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.15
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.14
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.12
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.11
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.07
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.05
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.02
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.98
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.98
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.94
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.93
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.93
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.93
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.92
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.89
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.88
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.83
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.82
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.74
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.72
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.7
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.7
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.6
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.59
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.56
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.5
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.46
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.44
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.39
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.36
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.32
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.29
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.26
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.21
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.12
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.1
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.07
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.06
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.01
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.0
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.99
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.99
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.93
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.93
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.67
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.61
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.56
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.51
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.49
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.48
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.48
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.45
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.45
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.43
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.43
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.42
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.39
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.3
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.29
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.2
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.13
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.13
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.08
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.0
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.99
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.96
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.87
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.85
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.83
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.83
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.8
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.79
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.74
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.66
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.31
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.04
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.99
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.97
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.96
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.83
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.81
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.76
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.75
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.68
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.23
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.15
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.39
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.32
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.24
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.51
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.38
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.24
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.89
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.49
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.59
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.4
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.08
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.61
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.2
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.86
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.55
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.89
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.59
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	87.58
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	87.14
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	87.11
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	86.97
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	86.85
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	85.88
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	84.28
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	84.0
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	83.55
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	81.05
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	81.02

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.3e-16  Score=106.32  Aligned_cols=52  Identities=37%  Similarity=0.666  Sum_probs=49.9

Q ss_pred             CCceecccccccccchhhHHHHHHhccCc-cccCCcChhccCCcHHHHHHhhhc
Q psy12199        466 MKPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQCDVCFKEFRSSVTLRNHTRRH  518 (597)
Q Consensus       466 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~e-~y~C~~C~~~F~~~~~L~~H~~~H  518 (597)
                      ||||.|+ ||++|.....|..|+++|+|+ ||.|++||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            4899995 999999999999999999999 999999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1e-16  Score=108.11  Aligned_cols=53  Identities=32%  Similarity=0.760  Sum_probs=31.3

Q ss_pred             CcccccccccccccCchhhhhhhccccccCccccCccchhhhchHHHHHHHHhh
Q psy12199        215 VREYECEICKKKFINKSTLKEHSVSHMSVKPFKCEICGHYLSRASRLRAHLKAH  268 (597)
Q Consensus       215 ~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H  268 (597)
                      ||||.|. ||++|.....|..|+++|+|++||.|++||++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3556663 6666666666666666666666666666666666666666665554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=6.5e-13  Score=80.37  Aligned_cols=38  Identities=29%  Similarity=0.518  Sum_probs=33.7

Q ss_pred             ccceeecCcCccccCChhHHHhhhcccCCCCcccccCC
Q psy12199        545 GYKILACEKCDVKFTHKALLAEHINTKHNTDVTLKCQL  582 (597)
Q Consensus       545 ~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~C~~  582 (597)
                      .+|||+|.+||++|.+.++|.+|++..|++++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            47899999999999999999999875599999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=7.4e-13  Score=80.53  Aligned_cols=37  Identities=27%  Similarity=0.497  Sum_probs=23.5

Q ss_pred             HHhhccCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        207 IHMRYHENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       207 ~H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      +|+++|++++||.|++||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3566666666666666666666666666666666654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.1e-12  Score=79.27  Aligned_cols=37  Identities=32%  Similarity=0.646  Sum_probs=26.3

Q ss_pred             CCcccccccccccccCchhhhhhhc-cccccCccccCc
Q psy12199        214 NVREYECEICKKKFINKSTLKEHSV-SHMSVKPFKCEI  250 (597)
Q Consensus       214 ~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~~~C~~  250 (597)
                      .+|||+|.+||+.|...++|.+|++ +|+|++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3567777777777777777777764 577777777753

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=3.8e-12  Score=73.67  Aligned_cols=33  Identities=30%  Similarity=0.522  Sum_probs=20.0

Q ss_pred             ccCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        211 YHENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      +|+|+|||+|.+||++|...++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            355666666666666666666666666666554

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=2.2e-12  Score=78.39  Aligned_cols=37  Identities=22%  Similarity=0.508  Sum_probs=34.2

Q ss_pred             HHHHHhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        538 MHTLREHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       538 ~H~~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      +|+++|+++|||+|++||++|...++|.+|+++ |+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~-HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-HTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTT-TCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCcc-CCCC
Confidence            477889999999999999999999999999998 9886

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=5.4e-12  Score=73.03  Aligned_cols=33  Identities=24%  Similarity=0.551  Sum_probs=31.1

Q ss_pred             HhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        542 REHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       542 ~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      +|+|+|||+|.+||++|.++++|.+|+++ |++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~-HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRV-HTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHG-GGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccc-cCCC
Confidence            58999999999999999999999999999 9875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.12  E-value=8.8e-12  Score=75.07  Aligned_cols=34  Identities=24%  Similarity=0.539  Sum_probs=16.8

Q ss_pred             HhhccCCCcccccccccccccCchhhhhhhcccc
Q psy12199        208 HMRYHENVREYECEICKKKFINKSTLKEHSVSHM  241 (597)
Q Consensus       208 H~~~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~  241 (597)
                      |.|+|+|+|||+|++|+++|...++|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3444555555555555555555555555554443

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=6.3e-12  Score=74.91  Aligned_cols=35  Identities=29%  Similarity=0.505  Sum_probs=31.9

Q ss_pred             HHhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        541 LREHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       541 ~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      ++|+|||||+|++|+++|+++++|.+|++.+|+.+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            46999999999999999999999999998878754

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.5e-11  Score=73.44  Aligned_cols=33  Identities=27%  Similarity=0.442  Sum_probs=17.7

Q ss_pred             ccCCCcccccccccccccCchhhhhhhcccccc
Q psy12199        211 YHENVREYECEICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      +|+|++||+|.+||++|...++|..|+++|+++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            455555555555555555555555555555443

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=1.9e-11  Score=73.55  Aligned_cols=34  Identities=32%  Similarity=0.623  Sum_probs=32.9

Q ss_pred             hhccccccCccccCccchhhhchHHHHHHHHhhc
Q psy12199        236 HSVSHMSVKPFKCEICGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       236 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  269 (597)
                      |.|+|+||+||+|++|+++|.++++|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            7899999999999999999999999999999995

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=1.7e-11  Score=73.21  Aligned_cols=34  Identities=32%  Similarity=0.531  Sum_probs=30.9

Q ss_pred             HHhhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        541 LREHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       541 ~~h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      ++|+|||||+|.+|+++|.++++|..|+++ |.++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~-H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKR-YHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHH-TTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcc-cCCC
Confidence            579999999999999999999999999999 5544

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=3.3e-11  Score=70.74  Aligned_cols=32  Identities=31%  Similarity=0.540  Sum_probs=30.1

Q ss_pred             hhccceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        543 EHGYKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       543 h~~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      |+|+|||+|.+|++.|+++++|.+|+++ |+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~-Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV-HTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG-GTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc-cCCc
Confidence            6899999999999999999999999998 8765

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=4.3e-11  Score=70.24  Aligned_cols=31  Identities=26%  Similarity=0.521  Sum_probs=17.5

Q ss_pred             cCCCcccccccccccccCchhhhhhhccccc
Q psy12199        212 HENVREYECEICKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       212 H~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  242 (597)
                      |+|++||+|++|++.|...++|.+|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            4555555555555555555555555555554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.98  E-value=6.5e-11  Score=66.38  Aligned_cols=29  Identities=38%  Similarity=0.777  Sum_probs=17.7

Q ss_pred             cccccccccccccCchhhhhhhccccccC
Q psy12199        216 REYECEICKKKFINKSTLKEHSVSHMSVK  244 (597)
Q Consensus       216 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  244 (597)
                      +||.|++|++.|...++|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            45666666666666666666666666653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=8.5e-11  Score=64.94  Aligned_cols=28  Identities=36%  Similarity=0.863  Sum_probs=24.7

Q ss_pred             CCceecccccccccchhhHHHHHHhccC
Q psy12199        466 MKPYTCEICSKTYTVEGSLLTHYDMHSG  493 (597)
Q Consensus       466 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~  493 (597)
                      ||||+|++||++|...+.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4789999999999999999999999886

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=9.8e-11  Score=69.64  Aligned_cols=27  Identities=37%  Similarity=0.764  Sum_probs=12.8

Q ss_pred             ccCCCcccccccccccccCchhhhhhh
Q psy12199        211 YHENVREYECEICKKKFINKSTLKEHS  237 (597)
Q Consensus       211 ~H~~~k~~~C~~C~~~F~~~~~L~~H~  237 (597)
                      +|+||+||.|++|++.|...++|.+|+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~   28 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHI   28 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHc
Confidence            344444444444444444444444443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.93  E-value=4.7e-11  Score=75.83  Aligned_cols=40  Identities=20%  Similarity=0.511  Sum_probs=27.5

Q ss_pred             hHHHHhhccCCCccccccc--ccccccCchhhhhhhccccccC
Q psy12199        204 SLSIHMRYHENVREYECEI--CKKKFINKSTLKEHSVSHMSVK  244 (597)
Q Consensus       204 ~L~~H~~~H~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~  244 (597)
                      .|..|+. |+|++||.|.+  |++.|...++|..|+++|+|++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4555654 77777777765  7777777777777777777764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.93  E-value=1.9e-10  Score=64.45  Aligned_cols=29  Identities=24%  Similarity=0.603  Sum_probs=20.2

Q ss_pred             ceeecCcCccccCChhHHHhhhcccCCCCc
Q psy12199        547 KILACEKCDVKFTHKALLAEHINTKHNTDV  576 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~  576 (597)
                      |||+|++|+++|++.+.|.+|+++ |+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~-HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRS-HTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHT-TTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCc-ccCCC
Confidence            467777777777777777777776 76664

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.4e-10  Score=64.87  Aligned_cols=29  Identities=28%  Similarity=0.700  Sum_probs=18.2

Q ss_pred             cccccccccccccCchhhhhhhccccccC
Q psy12199        216 REYECEICKKKFINKSTLKEHSVSHMSVK  244 (597)
Q Consensus       216 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  244 (597)
                      |||.|++||+.|...++|.+|+++|+||+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            45666666666666666666666666653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.92  E-value=8.3e-11  Score=64.98  Aligned_cols=27  Identities=26%  Similarity=0.714  Sum_probs=13.7

Q ss_pred             cccccccccccccCchhhhhhhccccc
Q psy12199        216 REYECEICKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       216 k~~~C~~C~~~F~~~~~L~~H~~~H~~  242 (597)
                      |||+|++|++.|...++|.+|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            455555555555555555555555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.5e-10  Score=63.16  Aligned_cols=28  Identities=25%  Similarity=0.585  Sum_probs=24.5

Q ss_pred             CceecccccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      |||.|++||++|...+.|.+|+++|+||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            5788999999999999999999999886

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4e-10  Score=66.66  Aligned_cols=32  Identities=28%  Similarity=0.467  Sum_probs=22.4

Q ss_pred             CCCCc--CccccCChHHHHHHHHHhhccceeecC
Q psy12199        521 FSCDE--CSVECQDLNALRMHTLREHGYKILACE  552 (597)
Q Consensus       521 ~~C~~--C~~~f~~~~~L~~H~~~h~~~k~~~C~  552 (597)
                      |.|+.  ||+.|..+..|++|+++|+|+|||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            55665  777777777777777777777777775

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=3.2e-10  Score=67.09  Aligned_cols=32  Identities=38%  Similarity=0.711  Sum_probs=22.7

Q ss_pred             ccccc--ccccccCchhhhhhhccccccCccccC
Q psy12199        218 YECEI--CKKKFINKSTLKEHSVSHMSVKPFKCE  249 (597)
Q Consensus       218 ~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~C~  249 (597)
                      |.|+.  ||++|.+.++|++|+++|+|++||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56665  777777777777777777777777775

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=5.9e-10  Score=59.67  Aligned_cols=26  Identities=35%  Similarity=0.878  Sum_probs=19.0

Q ss_pred             CceecccccccccchhhHHHHHHhcc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      |||+|.+||++|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            46777777777777777777777764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.74  E-value=8.4e-10  Score=69.97  Aligned_cols=39  Identities=23%  Similarity=0.554  Sum_probs=35.8

Q ss_pred             chhhhhhhccccccCccccCc--cchhhhchHHHHHHHHhhc
Q psy12199        230 KSTLKEHSVSHMSVKPFKCEI--CGHYLSRASRLRAHLKAHS  269 (597)
Q Consensus       230 ~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~  269 (597)
                      ++.|..|+. |+|++||+|++  |++.|...++|..|+++|+
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Ht   44 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL   44 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHT
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhccccc
Confidence            457788885 99999999987  9999999999999999998

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.6e-09  Score=59.91  Aligned_cols=28  Identities=43%  Similarity=0.810  Sum_probs=24.8

Q ss_pred             Cceeccc--ccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      |||.|++  ||++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5889988  999999999999999999886

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=1.1e-09  Score=58.69  Aligned_cols=24  Identities=42%  Similarity=0.814  Sum_probs=10.8

Q ss_pred             ccccCccchhhhchHHHHHHHHhh
Q psy12199        245 PFKCEICGHYLSRASRLRAHLKAH  268 (597)
Q Consensus       245 ~~~C~~C~~~f~~~~~L~~H~~~H  268 (597)
                      ||+|.+||++|...+.|.+|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            444444444444444444444444

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.6e-09  Score=60.09  Aligned_cols=28  Identities=36%  Similarity=0.930  Sum_probs=25.1

Q ss_pred             Cceeccc--ccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +||.|++  ||++|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899987  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=3.4e-09  Score=59.61  Aligned_cols=28  Identities=25%  Similarity=0.581  Sum_probs=15.9

Q ss_pred             ccccccc--ccccccCchhhhhhhcccccc
Q psy12199        216 REYECEI--CKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       216 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      |||.|++  |+++|.+.++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3555554  555555555555555555554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=8.4e-09  Score=57.82  Aligned_cols=28  Identities=21%  Similarity=0.481  Sum_probs=18.0

Q ss_pred             ceeecCc--CccccCChhHHHhhhcccCCCC
Q psy12199        547 KILACEK--CDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       547 k~~~C~~--C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      |||+|++  |+++|++.++|.+|+++ |+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~-HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRS-HTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHH-TTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCc-CcCC
Confidence            4666665  66666666666666666 6654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1e-08  Score=58.18  Aligned_cols=29  Identities=31%  Similarity=0.691  Sum_probs=18.5

Q ss_pred             cccccc--cccccccCchhhhhhhccccccC
Q psy12199        216 REYECE--ICKKKFINKSTLKEHSVSHMSVK  244 (597)
Q Consensus       216 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  244 (597)
                      +||.|+  .|+++|...++|.+|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            466664  36666666666666666666654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.5e-08  Score=56.51  Aligned_cols=29  Identities=28%  Similarity=0.549  Sum_probs=22.0

Q ss_pred             ceeecC--cCccccCChhHHHhhhcccCCCCc
Q psy12199        547 KILACE--KCDVKFTHKALLAEHINTKHNTDV  576 (597)
Q Consensus       547 k~~~C~--~C~~~F~~~~~L~~H~~~~H~~~~  576 (597)
                      |||.|+  .|+++|++.++|.+|+++ |++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~-HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRT-HTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCc-ccccC
Confidence            577884  588888888888888877 77764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=2.5e-08  Score=55.25  Aligned_cols=27  Identities=30%  Similarity=0.952  Sum_probs=21.8

Q ss_pred             Cceeccc--ccccccchhhHHHHHHhccC
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHYDMHSG  493 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~~~H~~  493 (597)
                      |||.|++  ||++|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788877  88888888888888888875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.44  E-value=5.6e-08  Score=55.31  Aligned_cols=29  Identities=28%  Similarity=0.732  Sum_probs=22.1

Q ss_pred             CCceeccc--ccccccchhhHHHHHHhccCc
Q psy12199        466 MKPYTCEI--CSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       466 ~k~~~C~~--C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      ++||.|++  ||++|...++|.+|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            36788877  888888888888888888753

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.39  E-value=6.2e-08  Score=55.10  Aligned_cols=28  Identities=36%  Similarity=0.729  Sum_probs=15.4

Q ss_pred             Cccccccc--ccccccCchhhhhhhccccc
Q psy12199        215 VREYECEI--CKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       215 ~k~~~C~~--C~~~F~~~~~L~~H~~~H~~  242 (597)
                      |+||.|++  |+++|...++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            35555555  55555555555555555543

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=3.3e-08  Score=54.79  Aligned_cols=27  Identities=30%  Similarity=0.752  Sum_probs=15.3

Q ss_pred             ccccccc--ccccccCchhhhhhhccccc
Q psy12199        216 REYECEI--CKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       216 k~~~C~~--C~~~F~~~~~L~~H~~~H~~  242 (597)
                      |||.|++  |+++|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3555554  55555555555555555543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=7.9e-08  Score=52.53  Aligned_cols=26  Identities=31%  Similarity=0.784  Sum_probs=17.1

Q ss_pred             Cceeccc--ccccccchhhHHHHHHhcc
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~~~H~  492 (597)
                      +||.|++  ||++|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4666666  6666666666666666664

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=1.7e-07  Score=46.97  Aligned_cols=26  Identities=38%  Similarity=0.864  Sum_probs=15.2

Q ss_pred             ceecccccccccchhhHHHHHHhccC
Q psy12199        468 PYTCEICSKTYTVEGSLLTHYDMHSG  493 (597)
Q Consensus       468 ~~~C~~C~~~f~~~~~L~~H~~~H~~  493 (597)
                      |++|+.|++.|+.+..|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34566666666666666666666554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=9.7e-08  Score=52.16  Aligned_cols=26  Identities=42%  Similarity=0.897  Sum_probs=15.3

Q ss_pred             ccccccc--ccccccCchhhhhhhcccc
Q psy12199        216 REYECEI--CKKKFINKSTLKEHSVSHM  241 (597)
Q Consensus       216 k~~~C~~--C~~~F~~~~~L~~H~~~H~  241 (597)
                      +||.|+.  ||++|.+.++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4566655  6666666666666666553

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3.9e-07  Score=45.66  Aligned_cols=26  Identities=31%  Similarity=0.548  Sum_probs=19.2

Q ss_pred             eeecCcCccccCChhHHHhhhcccCCC
Q psy12199        548 ILACEKCDVKFTHKALLAEHINTKHNT  574 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~~H~~  574 (597)
                      |.+|+.|++.|+++..|..||+. |+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~-htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRC-HTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGG-CCC
T ss_pred             CCccchhhhHhcchhHHHHHhhc-cCC
Confidence            45777777777777777777776 654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=4.6e-07  Score=49.01  Aligned_cols=29  Identities=41%  Similarity=0.767  Sum_probs=19.4

Q ss_pred             cccccccccccCchhhhhhhccccccCcc
Q psy12199        218 YECEICKKKFINKSTLKEHSVSHMSVKPF  246 (597)
Q Consensus       218 ~~C~~C~~~F~~~~~L~~H~~~H~~~~~~  246 (597)
                      ..|.+||+.|.....|.+|..+|++|+||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            45666666666666666666666666665

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=8.6e-07  Score=45.63  Aligned_cols=29  Identities=21%  Similarity=0.468  Sum_probs=23.7

Q ss_pred             cceeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        546 YKILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       546 ~k~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      ++||+|..|.+.-...+.|..|++. |+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~-htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRS-HTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTT-CCSC
T ss_pred             CCcceeeecccccCCchheEEeeec-ccCc
Confidence            5788888888888888888888887 7763

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=1e-06  Score=45.82  Aligned_cols=26  Identities=27%  Similarity=0.770  Sum_probs=18.5

Q ss_pred             CceecccccccccchhhHHHHHHhcc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      +||.|++||+.|.......+|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            67777777777777777777777663

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=8.8e-07  Score=46.10  Aligned_cols=26  Identities=31%  Similarity=0.537  Sum_probs=24.1

Q ss_pred             cceeecCcCccccCChhHHHhhhcccC
Q psy12199        546 YKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       546 ~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      |+||.|++||+.|......++|.+. |
T Consensus         1 EkPf~C~~CgrkFArsderkRH~ki-H   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKI-H   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGG-G
T ss_pred             CCCcccchhhhhhhcchhhhhhhhh-c
Confidence            6899999999999999999999987 5

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.7e-06  Score=44.55  Aligned_cols=29  Identities=28%  Similarity=0.706  Sum_probs=25.4

Q ss_pred             CCceecccccccccchhhHHHHHHhccCc
Q psy12199        466 MKPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       466 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      ++||+|.+|.+.-.+.+.|..|+|.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            37899999999999999999999999873

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.8e-06  Score=44.20  Aligned_cols=27  Identities=30%  Similarity=0.565  Sum_probs=23.9

Q ss_pred             ceecccccccccchhhHHHHHHhccCc
Q psy12199        468 PYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       468 ~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      .+.|.+||+.|...+.|++|+.+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            367999999999999999999999885

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.6e-06  Score=46.88  Aligned_cols=31  Identities=42%  Similarity=0.580  Sum_probs=28.4

Q ss_pred             CceecccccccccchhhHHHHHHhccCc-ccc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE-FYQ  497 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e-~y~  497 (597)
                      +...|++||+.|.....|.+|...|+|| ||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            5678999999999999999999999999 873

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.7e-06  Score=45.64  Aligned_cols=29  Identities=28%  Similarity=0.706  Sum_probs=23.4

Q ss_pred             CCceecccccccccchhhHHHHHHhccCc
Q psy12199        466 MKPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       466 ~k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      ++||.|++|+.+|..+..+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            37888888888888888888888888763

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.9e-06  Score=44.86  Aligned_cols=30  Identities=30%  Similarity=0.610  Sum_probs=25.0

Q ss_pred             ceeecCcCccccCChhHHHhhhcccCCCCc
Q psy12199        547 KILACEKCDVKFTHKALLAEHINTKHNTDV  576 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H~~~~H~~~~  576 (597)
                      +||+|.+|.+.....++|+.|+++.|+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccccccccccccchhhhhhhhcccccCC
Confidence            588888888888888889999888887653

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.2e-06  Score=46.15  Aligned_cols=28  Identities=25%  Similarity=0.619  Sum_probs=24.7

Q ss_pred             cceeecCcCccccCChhHHHhhhcccCCC
Q psy12199        546 YKILACEKCDVKFTHKALLAEHINTKHNT  574 (597)
Q Consensus       546 ~k~~~C~~C~~~F~~~~~L~~H~~~~H~~  574 (597)
                      ||||.|++|+..|.++..+.-|++. |.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrs-hdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRS-HDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHH-HSC
T ss_pred             CCCcccchHHHHhhccccceEeeec-ccC
Confidence            6899999999999999999999998 544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=8.9e-06  Score=41.60  Aligned_cols=24  Identities=38%  Similarity=0.749  Sum_probs=12.3

Q ss_pred             ccccccccccCchhhhhhhccccc
Q psy12199        219 ECEICKKKFINKSTLKEHSVSHMS  242 (597)
Q Consensus       219 ~C~~C~~~F~~~~~L~~H~~~H~~  242 (597)
                      .|.+||+.|...+.|++|+.+|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            355555555555555555555544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=1.8e-05  Score=40.99  Aligned_cols=26  Identities=27%  Similarity=0.462  Sum_probs=23.3

Q ss_pred             eecccccccccchhhHHHHHHhccCc
Q psy12199        469 YTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       469 ~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      |.|+.||......+.|..|+|+|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            78999999999999999999999875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=2.7e-05  Score=39.62  Aligned_cols=26  Identities=38%  Similarity=0.732  Sum_probs=20.0

Q ss_pred             CceecccccccccchhhHHHHHHhcc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      +||+|..|.+.-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67777777777777777777777775

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=3e-05  Score=40.10  Aligned_cols=23  Identities=26%  Similarity=0.637  Sum_probs=19.9

Q ss_pred             eeecCcCccccCChhHHHhhhcc
Q psy12199        548 ILACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      ||.|..|.++|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68888899999999999988876

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.49  E-value=3e-05  Score=38.28  Aligned_cols=23  Identities=35%  Similarity=0.824  Sum_probs=13.9

Q ss_pred             ccCCcChhccCCcHHHHHHhhhc
Q psy12199        496 YQCDVCFKEFRSSVTLRNHTRRH  518 (597)
Q Consensus       496 y~C~~C~~~F~~~~~L~~H~~~H  518 (597)
                      |+|..|.++|..++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666655

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=4.5e-05  Score=39.50  Aligned_cols=27  Identities=19%  Similarity=0.581  Sum_probs=17.4

Q ss_pred             CCCCcCccccCChHHHHHHHHHhhccc
Q psy12199        521 FSCDECSVECQDLNALRMHTLREHGYK  547 (597)
Q Consensus       521 ~~C~~C~~~f~~~~~L~~H~~~h~~~k  547 (597)
                      |.|+.||......+.|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            556666666666666666666666653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.48  E-value=3.3e-05  Score=41.17  Aligned_cols=28  Identities=29%  Similarity=0.591  Sum_probs=25.8

Q ss_pred             eeecCcCccccCChhHHHhhhcccCCCC
Q psy12199        548 ILACEKCDVKFTHKALLAEHINTKHNTD  575 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~~H~~~  575 (597)
                      ||.|.+|++.|+++..|.+|..+-|.+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            7999999999999999999999888874

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=3.3e-05  Score=39.34  Aligned_cols=26  Identities=27%  Similarity=0.588  Sum_probs=22.0

Q ss_pred             ceeecCcCccccCChhHHHhhhcccCC
Q psy12199        547 KILACEKCDVKFTHKALLAEHINTKHN  573 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H~~~~H~  573 (597)
                      +||+|..|++.....+.|++|+++ |.
T Consensus         2 kp~kck~cdyaaadsssl~kh~ri-hs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRI-HS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH-SC
T ss_pred             CCcccccccchhcchhhHhhhhhc-cc
Confidence            788888888888888888888887 64

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=4e-05  Score=40.47  Aligned_cols=27  Identities=44%  Similarity=0.872  Sum_probs=20.3

Q ss_pred             Cceeccc--ccccccchhhHHHHHHhccC
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHYDMHSG  493 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~~~H~~  493 (597)
                      +||.|.+  |++++...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4777876  88888888888888876654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=1.9e-05  Score=41.02  Aligned_cols=27  Identities=19%  Similarity=0.495  Sum_probs=22.3

Q ss_pred             ceeecCcCccccCChhHHHhhhcccCC
Q psy12199        547 KILACEKCDVKFTHKALLAEHINTKHN  573 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H~~~~H~  573 (597)
                      +||+|+.|.+-..+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            588888888888888888888887664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=5.8e-05  Score=37.92  Aligned_cols=26  Identities=23%  Similarity=0.470  Sum_probs=14.7

Q ss_pred             CCCcCccccCChHHHHHHHHHhhccc
Q psy12199        522 SCDECSVECQDLNALRMHTLREHGYK  547 (597)
Q Consensus       522 ~C~~C~~~f~~~~~L~~H~~~h~~~k  547 (597)
                      +|+.|.+.|.++--|+.|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            45555555555555555555555553

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=3.3e-05  Score=40.81  Aligned_cols=26  Identities=31%  Similarity=0.661  Sum_probs=18.3

Q ss_pred             ceeecCc--CccccCChhHHHhhhcccC
Q psy12199        547 KILACEK--CDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       547 k~~~C~~--C~~~F~~~~~L~~H~~~~H  572 (597)
                      |||.|.+  |+++++..++|++|++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4677755  7777777777777777655

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=3.5e-05  Score=44.21  Aligned_cols=26  Identities=23%  Similarity=0.588  Sum_probs=24.0

Q ss_pred             hccceeecCcCccccCChhHHHhhhc
Q psy12199        544 HGYKILACEKCDVKFTHKALLAEHIN  569 (597)
Q Consensus       544 ~~~k~~~C~~C~~~F~~~~~L~~H~~  569 (597)
                      +|.|||.|.+|++.|-.+..+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47899999999999999999999974

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.30  E-value=7.1e-05  Score=36.92  Aligned_cols=24  Identities=25%  Similarity=0.786  Sum_probs=22.7

Q ss_pred             eecccccccccchhhHHHHHHhcc
Q psy12199        469 YTCEICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       469 ~~C~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999985

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=6.8e-05  Score=37.67  Aligned_cols=25  Identities=32%  Similarity=0.607  Sum_probs=20.6

Q ss_pred             ecccccccccchhhHHHHHHhccCc
Q psy12199        470 TCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       470 ~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +|+.|.++|.++..|..|-|.|+||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            5888888888888888888888875

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.0001  Score=38.02  Aligned_cols=26  Identities=27%  Similarity=0.600  Sum_probs=19.3

Q ss_pred             CCCCcCccccCChHHHHHHHHHhhcc
Q psy12199        521 FSCDECSVECQDLNALRMHTLREHGY  546 (597)
Q Consensus       521 ~~C~~C~~~f~~~~~L~~H~~~h~~~  546 (597)
                      |.|..|...|..+..|+.||..|+|+
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccCC
Confidence            66777777777777777777777764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=7.4e-05  Score=42.84  Aligned_cols=24  Identities=25%  Similarity=0.782  Sum_probs=13.3

Q ss_pred             ccCccccCccchhhhchHHHHHHH
Q psy12199        242 SVKPFKCEICGHYLSRASRLRAHL  265 (597)
Q Consensus       242 ~~~~~~C~~C~~~f~~~~~L~~H~  265 (597)
                      |.+||.|.+|++.|-+..++.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            445555555555555555555554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.13  E-value=0.00018  Score=37.07  Aligned_cols=28  Identities=32%  Similarity=0.681  Sum_probs=24.1

Q ss_pred             CceecccccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      ..|.|..|...|.....|+.||-.|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            5688999999999999999999888875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.08  E-value=0.00011  Score=37.85  Aligned_cols=23  Identities=30%  Similarity=0.787  Sum_probs=10.1

Q ss_pred             ceeccc--ccccccchhhHHHHHHh
Q psy12199        468 PYTCEI--CSKTYTVEGSLLTHYDM  490 (597)
Q Consensus       468 ~~~C~~--C~~~f~~~~~L~~H~~~  490 (597)
                      ||.|+.  |+++|...+.|++|.++
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhc
Confidence            444433  44444444444444433

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00018  Score=37.17  Aligned_cols=22  Identities=32%  Similarity=0.899  Sum_probs=12.2

Q ss_pred             ceecccccccccchhhHHHHHH
Q psy12199        468 PYTCEICSKTYTVEGSLLTHYD  489 (597)
Q Consensus       468 ~~~C~~C~~~f~~~~~L~~H~~  489 (597)
                      ||.|..|..+|.++.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            3555555555555555555554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.00027  Score=36.65  Aligned_cols=29  Identities=28%  Similarity=0.526  Sum_probs=26.5

Q ss_pred             CceecccCccccCChhhHHhHhhhccCCC
Q psy12199        418 KSVTCSVCEKAFSSKENCKAHYTRQHGNK  446 (597)
Q Consensus       418 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~~  446 (597)
                      +||.|..|....+..++|+.|++..|+.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            58999999999999999999999888764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.96  E-value=0.00022  Score=36.87  Aligned_cols=28  Identities=39%  Similarity=0.734  Sum_probs=24.3

Q ss_pred             Cceeccc--ccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +||.|..  |.+.|.+...|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4788866  999999999999999999885

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00016  Score=38.46  Aligned_cols=27  Identities=37%  Similarity=0.690  Sum_probs=18.5

Q ss_pred             ccccccc--ccccccCchhhhhhh-ccccc
Q psy12199        216 REYECEI--CKKKFINKSTLKEHS-VSHMS  242 (597)
Q Consensus       216 k~~~C~~--C~~~F~~~~~L~~H~-~~H~~  242 (597)
                      +||.|..  |.+.|++.+.-.+|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4677766  777777777777775 66654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.85  E-value=0.0003  Score=36.22  Aligned_cols=25  Identities=32%  Similarity=0.611  Sum_probs=22.5

Q ss_pred             ccccCCc--ChhccCCcHHHHHHhhhc
Q psy12199        494 EFYQCDV--CFKEFRSSVTLRNHTRRH  518 (597)
Q Consensus       494 e~y~C~~--C~~~F~~~~~L~~H~~~H  518 (597)
                      .||+|+.  |+++|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            0789987  999999999999999987

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.83  E-value=0.00038  Score=37.03  Aligned_cols=28  Identities=21%  Similarity=0.587  Sum_probs=25.8

Q ss_pred             ceecccCccccCChhhHHhHhhhccCCC
Q psy12199        419 SVTCSVCEKAFSSKENCKAHYTRQHGNK  446 (597)
Q Consensus       419 ~~~C~~C~~~f~~~~~L~~H~~~~h~~~  446 (597)
                      ||.|.+|++.|+.+..|.+|....|++.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6999999999999999999999888863

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00026  Score=37.68  Aligned_cols=28  Identities=43%  Similarity=0.785  Sum_probs=22.2

Q ss_pred             Cceeccc--ccccccchhhHHHHH-HhccCc
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHY-DMHSGE  494 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~-~~H~~e  494 (597)
                      +||.|..  |.+.|++.+.-..|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5788877  888888888888886 777653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.80  E-value=0.00024  Score=40.74  Aligned_cols=23  Identities=35%  Similarity=0.788  Sum_probs=9.6

Q ss_pred             cccccccccccCchhhhhhhccc
Q psy12199        218 YECEICKKKFINKSTLKEHSVSH  240 (597)
Q Consensus       218 ~~C~~C~~~F~~~~~L~~H~~~H  240 (597)
                      |.|.+|++.|.+...|--||+.|
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTT
T ss_pred             cCCCCCCCccCCcccccchHhhh
Confidence            44444444444444444444443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.79  E-value=0.0003  Score=34.64  Aligned_cols=23  Identities=26%  Similarity=0.537  Sum_probs=17.5

Q ss_pred             eeecCcCccccCChhHHHhhhcc
Q psy12199        548 ILACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      ||+|..|...|-++.+|..||..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            67777787778777777777754

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.74  E-value=0.00055  Score=39.20  Aligned_cols=28  Identities=25%  Similarity=0.713  Sum_probs=23.0

Q ss_pred             CceecccccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +.|.|.+|++.|.+..+|--||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            5688888888888888888888888654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.66  E-value=0.00023  Score=36.83  Aligned_cols=28  Identities=29%  Similarity=0.669  Sum_probs=20.2

Q ss_pred             ccccccc--ccccccCchhhhhhhcccccc
Q psy12199        216 REYECEI--CKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       216 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      +||.|..  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677764  777777777777777777764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.0011  Score=34.26  Aligned_cols=28  Identities=21%  Similarity=0.515  Sum_probs=25.3

Q ss_pred             CceecccCccccCChhhHHhHhhhccCC
Q psy12199        418 KSVTCSVCEKAFSSKENCKAHYTRQHGN  445 (597)
Q Consensus       418 ~~~~C~~C~~~f~~~~~L~~H~~~~h~~  445 (597)
                      +||+|+.|.......++|..|++..|+.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4799999999999999999999987763

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0018  Score=32.97  Aligned_cols=19  Identities=37%  Similarity=0.621  Sum_probs=7.0

Q ss_pred             CCcChhccCCcHHHHHHhh
Q psy12199        498 CDVCFKEFRSSVTLRNHTR  516 (597)
Q Consensus       498 C~~C~~~F~~~~~L~~H~~  516 (597)
                      |+.|.++.+++..|+.|.|
T Consensus         5 c~ecsyscsskaalrvh~r   23 (28)
T d1x5wa1           5 CSECSYSCSSKAALRIHER   23 (28)
T ss_dssp             CSSSSCEESSHHHHHHHHG
T ss_pred             CcccccccCcHHHHHHhhc
Confidence            3333333333333333333

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0023  Score=32.60  Aligned_cols=25  Identities=28%  Similarity=0.570  Sum_probs=23.2

Q ss_pred             ceecccccccccchhhHHHHHHhcc
Q psy12199        468 PYTCEICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       468 ~~~C~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      |-+|+.|.++..++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999984

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.97  E-value=0.0016  Score=32.88  Aligned_cols=23  Identities=30%  Similarity=0.488  Sum_probs=20.0

Q ss_pred             eeecCcCccccCChhHHHhhhcc
Q psy12199        548 ILACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      ||+|..||+.+-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            78999999999999999998754

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.96  E-value=0.0025  Score=31.33  Aligned_cols=25  Identities=28%  Similarity=0.679  Sum_probs=22.3

Q ss_pred             ceecccCccccCChhhHHhHhhhcc
Q psy12199        419 SVTCSVCEKAFSSKENCKAHYTRQH  443 (597)
Q Consensus       419 ~~~C~~C~~~f~~~~~L~~H~~~~h  443 (597)
                      ||+|..|...|..+..|..|+...|
T Consensus         2 pykcsscsqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999987443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0027  Score=35.89  Aligned_cols=27  Identities=33%  Similarity=0.643  Sum_probs=21.0

Q ss_pred             CCceec--ccccccccchhhHHHHHHhcc
Q psy12199        466 MKPYTC--EICSKTYTVEGSLLTHYDMHS  492 (597)
Q Consensus       466 ~k~~~C--~~C~~~f~~~~~L~~H~~~H~  492 (597)
                      ++||.|  +-|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            478888  448888888888888877764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0015  Score=36.90  Aligned_cols=27  Identities=33%  Similarity=0.578  Sum_probs=24.0

Q ss_pred             ccceeec--CcCccccCChhHHHhhhcccC
Q psy12199        545 GYKILAC--EKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       545 ~~k~~~C--~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      .+|||.|  +.|+.+|.+...|..|..+ |
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~K-H   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHK-H   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHH-H
T ss_pred             CCCceecCCCCccccccchHHHHHhhhh-h
Confidence            4799999  7899999999999999877 5

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0026  Score=32.25  Aligned_cols=26  Identities=27%  Similarity=0.614  Sum_probs=22.1

Q ss_pred             eeecCcCccccCChhHHHhhhcccCC
Q psy12199        548 ILACEKCDVKFTHKALLAEHINTKHN  573 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~~H~  573 (597)
                      .|+|+.|+-...++++|..|++..|+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            37899999999999999999987664

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.75  E-value=0.002  Score=31.80  Aligned_cols=24  Identities=29%  Similarity=0.571  Sum_probs=20.1

Q ss_pred             eecCcCccccCChhHHHhhhcccC
Q psy12199        549 LACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       549 ~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      |.|+.|-+.|+++.++..|+++.|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            778888888999998888887655

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.0039  Score=37.00  Aligned_cols=25  Identities=28%  Similarity=0.474  Sum_probs=20.1

Q ss_pred             CCCCCcCccccCChHHHHHHHHHhh
Q psy12199        520 NFSCDECSVECQDLNALRMHTLREH  544 (597)
Q Consensus       520 ~~~C~~C~~~f~~~~~L~~H~~~h~  544 (597)
                      -|.|.+|||.|.+...|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4778888888888888888887774

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.23  E-value=0.0048  Score=31.13  Aligned_cols=19  Identities=37%  Similarity=0.829  Sum_probs=9.8

Q ss_pred             eecccccccccchhhHHHH
Q psy12199        469 YTCEICSKTYTVEGSLLTH  487 (597)
Q Consensus       469 ~~C~~C~~~f~~~~~L~~H  487 (597)
                      |.|..||+.+-.+.+|..|
T Consensus         2 f~c~kcgkcyfrkenlleh   20 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEH   20 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHH
Confidence            4455555555555555554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.15  E-value=0.0063  Score=29.98  Aligned_cols=24  Identities=38%  Similarity=0.668  Sum_probs=22.3

Q ss_pred             eecccCccccCChhhHHhHhhhcc
Q psy12199        420 VTCSVCEKAFSSKENCKAHYTRQH  443 (597)
Q Consensus       420 ~~C~~C~~~f~~~~~L~~H~~~~h  443 (597)
                      |.|+.|-+.|..+.++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999998766

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.39  E-value=0.015  Score=29.40  Aligned_cols=26  Identities=23%  Similarity=0.600  Sum_probs=23.6

Q ss_pred             ceecccCccccCChhhHHhHhhhccC
Q psy12199        419 SVTCSVCEKAFSSKENCKAHYTRQHG  444 (597)
Q Consensus       419 ~~~C~~C~~~f~~~~~L~~H~~~~h~  444 (597)
                      .|+|+.|+-..+.++.|+.|++..|+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            38999999999999999999997774

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.32  E-value=0.01  Score=32.11  Aligned_cols=23  Identities=30%  Similarity=0.738  Sum_probs=20.6

Q ss_pred             eeecCcCccccCChhHHHhhhcc
Q psy12199        548 ILACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       548 ~~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      .|.|..|++.|+++..+.+|-..
T Consensus         4 afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhhh
Confidence            58999999999999999999765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.011  Score=35.09  Aligned_cols=25  Identities=32%  Similarity=0.668  Sum_probs=19.8

Q ss_pred             cccCCcChhccCCcHHHHHHhhhcC
Q psy12199        495 FYQCDVCFKEFRSSVTLRNHTRRHD  519 (597)
Q Consensus       495 ~y~C~~C~~~F~~~~~L~~H~~~H~  519 (597)
                      -|.|..|||.|.....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5778888888888888888877775

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.024  Score=28.85  Aligned_cols=18  Identities=39%  Similarity=0.789  Sum_probs=8.9

Q ss_pred             ChhccCCcHHHHHHhhhc
Q psy12199        501 CFKEFRSSVTLRNHTRRH  518 (597)
Q Consensus       501 C~~~F~~~~~L~~H~~~H  518 (597)
                      |++.|+..+.++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            445555555555554444

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.38  E-value=0.027  Score=30.45  Aligned_cols=26  Identities=31%  Similarity=0.700  Sum_probs=21.5

Q ss_pred             ceecccccccccchhhHHHHHHhccC
Q psy12199        468 PYTCEICSKTYTVEGSLLTHYDMHSG  493 (597)
Q Consensus       468 ~~~C~~C~~~f~~~~~L~~H~~~H~~  493 (597)
                      .|.|..||+.|.....+.+|...-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            58899999999999999888776554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.24  E-value=0.027  Score=31.03  Aligned_cols=20  Identities=20%  Similarity=0.129  Sum_probs=15.0

Q ss_pred             ccccCChHHHHHHHHHhhcc
Q psy12199        527 SVECQDLNALRMHTLREHGY  546 (597)
Q Consensus       527 ~~~f~~~~~L~~H~~~h~~~  546 (597)
                      ++.|.....|..|+++|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45677777888888888775

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.89  E-value=0.021  Score=31.47  Aligned_cols=20  Identities=25%  Similarity=0.494  Sum_probs=17.6

Q ss_pred             cccccchhhHHHHHHhccCc
Q psy12199        475 SKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       475 ~~~f~~~~~L~~H~~~H~~e  494 (597)
                      ++.|.....|..|+|+||||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45699999999999999986

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.49  E-value=0.043  Score=28.74  Aligned_cols=28  Identities=36%  Similarity=0.758  Sum_probs=23.8

Q ss_pred             Cceeccc--ccccccchhhHHHHHHhccCc
Q psy12199        467 KPYTCEI--CSKTYTVEGSLLTHYDMHSGE  494 (597)
Q Consensus       467 k~~~C~~--C~~~f~~~~~L~~H~~~H~~e  494 (597)
                      +.|.|..  |+..|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            5688865  999999999999999999886

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.59  E-value=0.061  Score=26.90  Aligned_cols=19  Identities=21%  Similarity=0.515  Sum_probs=11.6

Q ss_pred             CccccCChHHHHHHHHHhh
Q psy12199        526 CSVECQDLNALRMHTLREH  544 (597)
Q Consensus       526 C~~~f~~~~~L~~H~~~h~  544 (597)
                      |++.|.....|+.|+.+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            6666666666666665554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.40  E-value=0.054  Score=28.93  Aligned_cols=22  Identities=18%  Similarity=0.498  Sum_probs=15.4

Q ss_pred             CceecccccccccchhhHHHHH
Q psy12199        467 KPYTCEICSKTYTVEGSLLTHY  488 (597)
Q Consensus       467 k~~~C~~C~~~f~~~~~L~~H~  488 (597)
                      ..|.|.-||-+|.+.+.|..|+
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            3467777777777777777775

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.08  E-value=0.059  Score=29.22  Aligned_cols=30  Identities=27%  Similarity=0.527  Sum_probs=25.6

Q ss_pred             ccceeecCcCccccCChhHHHhhhcccCCC
Q psy12199        545 GYKILACEKCDVKFTHKALLAEHINTKHNT  574 (597)
Q Consensus       545 ~~k~~~C~~C~~~F~~~~~L~~H~~~~H~~  574 (597)
                      |+..|+|.+|.+.++..+++-+|..+.|..
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            566799999999999999999998876753

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.61  E-value=0.074  Score=27.26  Aligned_cols=26  Identities=42%  Similarity=0.847  Sum_probs=20.4

Q ss_pred             eeec--CcCccccCChhHHHhhhcccCC
Q psy12199        548 ILAC--EKCDVKFTHKALLAEHINTKHN  573 (597)
Q Consensus       548 ~~~C--~~C~~~F~~~~~L~~H~~~~H~  573 (597)
                      .|+|  +.|+-.|+++.+++.|....|+
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhcc
Confidence            4677  4688889999998888877664

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.20  E-value=0.054  Score=27.09  Aligned_cols=18  Identities=33%  Similarity=0.556  Sum_probs=9.7

Q ss_pred             ChhccCCcHHHHHHhhhc
Q psy12199        501 CFKEFRSSVTLRNHTRRH  518 (597)
Q Consensus       501 C~~~F~~~~~L~~H~~~H  518 (597)
                      |++.|..-..|+.|+-.|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555555444

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.86  E-value=0.045  Score=28.64  Aligned_cols=27  Identities=22%  Similarity=0.447  Sum_probs=14.9

Q ss_pred             ccccc--cccccccCchhhhhhhcccccc
Q psy12199        217 EYECE--ICKKKFINKSTLKEHSVSHMSV  243 (597)
Q Consensus       217 ~~~C~--~C~~~F~~~~~L~~H~~~H~~~  243 (597)
                      .|.|.  .|+..|.....|..|+-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            34553  3666666666666665555553

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.55  E-value=0.095  Score=27.95  Aligned_cols=22  Identities=32%  Similarity=0.473  Sum_probs=18.3

Q ss_pred             cccCCcChhccCCcHHHHHHhh
Q psy12199        495 FYQCDVCFKEFRSSVTLRNHTR  516 (597)
Q Consensus       495 ~y~C~~C~~~F~~~~~L~~H~~  516 (597)
                      .|.|+-||-.|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            5888888888888888888864

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.89  E-value=0.077  Score=35.16  Aligned_cols=26  Identities=19%  Similarity=0.339  Sum_probs=20.2

Q ss_pred             CCCceecccccccccchhhHHHHHHh
Q psy12199        465 KMKPYTCEICSKTYTVEGSLLTHYDM  490 (597)
Q Consensus       465 ~~k~~~C~~C~~~f~~~~~L~~H~~~  490 (597)
                      +...|-|..|++.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            44568888888888888888888754

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.59  E-value=0.21  Score=25.60  Aligned_cols=27  Identities=30%  Similarity=0.474  Sum_probs=23.8

Q ss_pred             ceecccCccccCChhhHHhHhhhccCC
Q psy12199        419 SVTCSVCEKAFSSKENCKAHYTRQHGN  445 (597)
Q Consensus       419 ~~~C~~C~~~f~~~~~L~~H~~~~h~~  445 (597)
                      .|.|..|++...+...++.|+...|..
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            388999999999999999999877754

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.58  E-value=0.15  Score=25.84  Aligned_cols=19  Identities=26%  Similarity=0.410  Sum_probs=16.0

Q ss_pred             cCccccCChHHHHHHHHHh
Q psy12199        525 ECSVECQDLNALRMHTLRE  543 (597)
Q Consensus       525 ~C~~~f~~~~~L~~H~~~h  543 (597)
                      -|++.|.+.++++.|+-+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3888999999999988776

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.14  E-value=0.15  Score=33.09  Aligned_cols=34  Identities=26%  Similarity=0.699  Sum_probs=21.3

Q ss_pred             ccccChhhhhHHHHHHHHHHhhhhhcccCCCccccCCCCc
Q psy12199        157 MHECRECGSQFADILKHSLETHLSFIHVQDNQLKCTICNK  196 (597)
Q Consensus       157 ~~~C~~C~~~f~~~~~~~l~~H~~~~h~~~~~~~C~~C~k  196 (597)
                      .|.|+.|++.|..+....|      .-.....|.|.+|+-
T Consensus        14 ~y~Cp~C~~~ys~Lda~~L------~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          14 SFKCPVCSSTFTDLEANQL------FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             EEECSSSCCEEEHHHHHHH------EETTTTEEBCSSSCC
T ss_pred             ceECCCCCCCcchhhHHHh------cCcCCCeEEecCCCC
Confidence            3888888888874322222      334456788888875

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.11  E-value=0.097  Score=33.97  Aligned_cols=15  Identities=20%  Similarity=0.868  Sum_probs=7.0

Q ss_pred             ccccccccccccCch
Q psy12199        217 EYECEICKKKFINKS  231 (597)
Q Consensus       217 ~~~C~~C~~~F~~~~  231 (597)
                      .|.|+.|++.|+...
T Consensus        14 ~y~Cp~C~~~ys~Ld   28 (62)
T d1vd4a_          14 SFKCPVCSSTFTDLE   28 (62)
T ss_dssp             EEECSSSCCEEEHHH
T ss_pred             ceECCCCCCCcchhh
Confidence            345555555444433

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=86.97  E-value=0.14  Score=29.03  Aligned_cols=10  Identities=30%  Similarity=0.654  Sum_probs=4.8

Q ss_pred             CccccCCCCc
Q psy12199        187 NQLKCTICNK  196 (597)
Q Consensus       187 ~~~~C~~C~k  196 (597)
                      +.|.|..||.
T Consensus         4 ~~~vC~vCGy   13 (36)
T d1yuza2           4 KFHLCPICGY   13 (36)
T ss_dssp             CEEECSSSCC
T ss_pred             CEEECCCCCC
Confidence            3445555554

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.85  E-value=0.12  Score=29.50  Aligned_cols=10  Identities=20%  Similarity=0.537  Sum_probs=4.5

Q ss_pred             Cccccccccc
Q psy12199        215 VREYECEICK  224 (597)
Q Consensus       215 ~k~~~C~~C~  224 (597)
                      +-|-.|++|+
T Consensus        18 ~~P~~CPvCg   27 (37)
T d1nnqa2          18 EAPEYCPVCG   27 (37)
T ss_dssp             CCCSBCTTTC
T ss_pred             CCCCcCCCCC
Confidence            3444444444

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.88  E-value=0.49  Score=24.18  Aligned_cols=19  Identities=32%  Similarity=0.739  Sum_probs=8.5

Q ss_pred             ccCCcChhccCCcHHHHHH
Q psy12199        496 YQCDVCFKEFRSSVTLRNH  514 (597)
Q Consensus       496 y~C~~C~~~F~~~~~L~~H  514 (597)
                      |.|..||+...+...++.|
T Consensus         3 ftc~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHH
T ss_pred             eechhHHHHHhhccCceEE
Confidence            3444444444444444444

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=84.28  E-value=0.41  Score=28.06  Aligned_cols=30  Identities=20%  Similarity=0.418  Sum_probs=26.0

Q ss_pred             ccCceecccCccccCChhhHHhHhhhccCC
Q psy12199        416 HVKSVTCSVCEKAFSSKENCKAHYTRQHGN  445 (597)
Q Consensus       416 ~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~  445 (597)
                      .+.|-.|++|+.......+|++|+...|-.
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~   50 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            457899999999999999999999876643

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.00  E-value=0.27  Score=29.59  Aligned_cols=33  Identities=27%  Similarity=0.509  Sum_probs=27.6

Q ss_pred             ccceeec--CcCccccCChhHHHhhhcccCCCCcc
Q psy12199        545 GYKILAC--EKCDVKFTHKALLAEHINTKHNTDVT  577 (597)
Q Consensus       545 ~~k~~~C--~~C~~~F~~~~~L~~H~~~~H~~~~~  577 (597)
                      .-+||.|  ..|...|+...+|.-|.+..|....|
T Consensus        17 pyrpyrcvhqgc~aaftiq~nlilhy~avh~s~lp   51 (61)
T d1x3ca1          17 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP   51 (61)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred             CCCceeeeccchhhhhhhhhhHHHHHHHHhhhcCc
Confidence            4578999  57999999999999999988876554

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.55  E-value=0.26  Score=28.92  Aligned_cols=28  Identities=18%  Similarity=0.375  Sum_probs=22.1

Q ss_pred             ccceeecCcCccccCChhHHHhhhcccC
Q psy12199        545 GYKILACEKCDVKFTHKALLAEHINTKH  572 (597)
Q Consensus       545 ~~k~~~C~~C~~~F~~~~~L~~H~~~~H  572 (597)
                      .+.|-.|++|+....+..+|.+|+..-|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4567888888888888888888887655

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.05  E-value=0.34  Score=30.76  Aligned_cols=25  Identities=32%  Similarity=0.658  Sum_probs=17.2

Q ss_pred             cccCCcChhccCCcHHHHHHhhhcC
Q psy12199        495 FYQCDVCFKEFRSSVTLRNHTRRHD  519 (597)
Q Consensus       495 ~y~C~~C~~~F~~~~~L~~H~~~H~  519 (597)
                      .|+|..|+-.|.+...|..|+..|.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhcc
Confidence            4777777777777777777766664

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.02  E-value=0.32  Score=32.06  Aligned_cols=24  Identities=21%  Similarity=0.437  Sum_probs=17.8

Q ss_pred             ceeecCcCccccCChhHHHhhhcc
Q psy12199        547 KILACEKCDVKFTHKALLAEHINT  570 (597)
Q Consensus       547 k~~~C~~C~~~F~~~~~L~~H~~~  570 (597)
                      -.|-|..|++.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            347788888888888888877765